View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19467_high_27 (Length: 327)
Name: NF19467_high_27
Description: NF19467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19467_high_27 |
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Alignment Details
Target: chr5 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 41267523 - 41267214
Alignment:
| Q |
1 |
tgcaaattgaacttttagactttttaaagttgtgagtgtgaggttgatgattttgtcactgaattattcactattggacaaagatttcgtaacaaaatga |
100 |
Q |
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| T |
41267523 |
tgcaaattgaacttttagactttttaaagttgtgagtgtgaggttgatgattttgtcactgaattattcactattggacaaagatttcgtaacaaaatga |
41267424 |
T |
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| Q |
101 |
ttattctaatatttgtttgttaattaaaagaattattatgataactttgctatctatttttaagctaggtaagatttgaaagtgaaaagtggtgtaacaa |
200 |
Q |
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| T |
41267423 |
ttattctaatatttgtttgttgattaaaagaattattatgataactttgctatctatttttaagctaggtaagatttgaaagtgaaaagtggtgtaacaa |
41267324 |
T |
|
| Q |
201 |
gtaccaactcaatgttactcttcaccatacaaaatcaacatgagtgatgggtaaaaaactgcaaatccctttccacatgttaaattataaaattgaaaac |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
41267323 |
gtaccaactcaatgttactcttcaccatacaaaatcaacatgagtgatgggtaaaaaactgcaaatccctttccacatgttaaat--taaaattgaaaac |
41267226 |
T |
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| Q |
301 |
taaagctaaacc |
312 |
Q |
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|||||||||||| |
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| T |
41267225 |
taaagctaaacc |
41267214 |
T |
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