View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19467_high_38 (Length: 282)

Name: NF19467_high_38
Description: NF19467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19467_high_38
NF19467_high_38
[»] chr7 (10 HSPs)
chr7 (1-282)||(39653311-39653588)
chr7 (134-282)||(25635888-25636035)
chr7 (160-282)||(47363714-47363834)
chr7 (137-225)||(7493051-7493138)
chr7 (160-220)||(10493380-10493439)
chr7 (213-282)||(10493472-10493541)
chr7 (234-282)||(45435430-45435478)
chr7 (108-226)||(33049219-33049337)
chr7 (160-226)||(31742982-31743048)
chr7 (160-239)||(45435503-45435583)
[»] chr1 (7 HSPs)
chr1 (108-282)||(34664816-34664989)
chr1 (146-282)||(12990553-12990687)
chr1 (135-278)||(9457660-9457798)
chr1 (135-278)||(9461757-9461895)
chr1 (138-282)||(32617559-32617700)
chr1 (161-226)||(14081723-14081785)
chr1 (125-181)||(26828605-26828661)
[»] chr2 (6 HSPs)
chr2 (87-258)||(5430210-5430380)
chr2 (108-282)||(17988946-17989118)
chr2 (139-282)||(37794641-37794782)
chr2 (140-226)||(19263826-19263911)
chr2 (145-215)||(35016319-35016388)
chr2 (230-282)||(35016461-35016512)
[»] chr6 (5 HSPs)
chr6 (160-281)||(9177634-9177751)
chr6 (135-260)||(26660602-26660726)
chr6 (135-260)||(26766573-26766697)
chr6 (230-282)||(10117207-10117257)
chr6 (125-181)||(9771928-9771984)
[»] chr4 (11 HSPs)
chr4 (160-282)||(55606257-55606377)
chr4 (118-279)||(38411837-38411997)
chr4 (127-282)||(13198058-13198211)
chr4 (145-282)||(28147021-28147156)
chr4 (135-282)||(25968038-25968183)
chr4 (184-282)||(46308386-46308483)
chr4 (126-220)||(11440664-11440760)
chr4 (118-189)||(29866152-29866223)
chr4 (116-181)||(46824604-46824669)
chr4 (239-282)||(11440627-11440670)
chr4 (118-187)||(49583108-49583177)
[»] chr8 (6 HSPs)
chr8 (145-282)||(23489965-23490100)
chr8 (134-220)||(13402182-13402267)
chr8 (138-220)||(13396884-13396965)
chr8 (183-282)||(7154302-7154400)
chr8 (160-197)||(14370805-14370842)
chr8 (160-192)||(7154267-7154299)
[»] chr3 (4 HSPs)
chr3 (129-282)||(11783386-11783538)
chr3 (160-282)||(7299146-7299266)
chr3 (160-193)||(53527191-53527224)
chr3 (133-181)||(32104179-32104227)
[»] chr5 (7 HSPs)
chr5 (141-282)||(39426082-39426220)
chr5 (135-278)||(41283534-41283674)
chr5 (160-281)||(22927075-22927194)
chr5 (118-246)||(36491560-36491687)
chr5 (139-282)||(13424629-13424767)
chr5 (118-181)||(37247652-37247715)
chr5 (140-181)||(31219520-31219561)


Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-118; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 39653311 - 39653588
Alignment:
Q  1 tatttaaattcattaaaattcaaatatggaagaatcatcaaaatacaatcaagatgcaatcaccaaagttttaaataatggtcgcggcggtagcgtatag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||| | ||||||||    
T  39653311 tatttaaattcattaaaattcaaatatggaagaatcatcaaaatacaatcaagatgcaatcaccaaagttttaaataatggtc---gcgctggcgtatag 39653407  T
Q  101 aattttacaattttggatgttaccgatgttgcattacggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagca 200  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||||||| ||| ||||||||||||||||||||||||    
T  39653408 aattttacaattttggatgttaccgatgttgcgttatggattgtggttgttgcggtgtgaattaatcacaatattccacaactcttaaataatgatagca 39653507  T
Q  201 actgtaaataacttaaactagagataaagttggagttctaaactaggtaaggagataacattatgtaatttatgatcaaata 282  Q
    || ||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  39653508 ac-gtaaataacttaaactagatataaagttggagttctaaactagataaagagataacattatgtaatttatgatcaaata 39653588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 134 - 282
Target Start/End: Original strand, 25635888 - 25636035
Alignment:
Q  134 ttacggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagataaagttgg 233  Q
    |||||||||| |||||||||||| | ||||||||||||||||||||| ||||||||||||||||  || |||||||||||||||||| ||||| | ||||    
T  25635888 ttacggattgcggttgttgcggtgtgaattaatcacaacattgcacacctcttaaataatgataataa-tgtaaataacttaaactaaagatagatttgg 25635986  T
Q  234 agttctaaactaggtaaggagataacattatgtaatttatgatcaaata 282  Q
    |||||||||||||  |||||||||||||||||||||||||||| |||||    
T  25635987 agttctaaactagacaaggagataacattatgtaatttatgattaaata 25636035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 47363714 - 47363834
Alignment:
Q  160 aattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagataaagttggagttctaaactaggtaaggagataac 259  Q
    ||||||||| |||||||||||| |||||||||||||||  |||| |||||||||||||||||||| | | ||| ||||||||||||| ||||||||||||    
T  47363714 aattaatcaaaacattgcacaagtcttaaataatgataataact-taaataacttaaactagagaaagatttgaagttctaaactagataaggagataac 47363812  T
Q  260 attatgtaatttatgatcaaata 282  Q
     ||||||||| ||||||||||||    
T  47363813 -ttatgtaatctatgatcaaata 47363834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 225
Target Start/End: Original strand, 7493051 - 7493138
Alignment:
Q  137 cggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagat 225  Q
    |||||||||||| |  |||| | |||||||||||||||| |||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  7493051 cggattgtggttatcacggtgtgaattaatcacaacattacacaactcttaaataatgatagtaac-gtaaataatttaaactagagat 7493138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 10493380 - 10493439
Alignment:
Q  160 aattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaacta 220  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  10493380 aattaatcacaacattgcacaactcttaaataatgatagtaac-gtaaataacttaaacta 10493439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 282
Target Start/End: Original strand, 10493472 - 10493541
Alignment:
Q  213 ttaaactagagataaagttggagttctaaactaggtaaggagataacattatgtaatttatgatcaaata 282  Q
    |||||||||||||  | |||||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  10493472 ttaaactagagatggatttggaggtctaaactatataaggagataacattatgtaatttatgatcaaata 10493541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 45435478 - 45435430
Alignment:
Q  234 agttctaaactaggtaaggagataacattatgtaatttatgatcaaata 282  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  45435478 agttctaaactagataaagagataacattatgtaatttatgatcaaata 45435430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 226
Target Start/End: Complemental strand, 33049337 - 33049219
Alignment:
Q  108 caattttggatgttaccgatgttgcattacggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatg-atagcaactgta 206  Q
    |||||| || |||||| ||||  || ||| |||||||||| || | ||| | ||||||||| ||||||||||||||||||||||||| |||  |||| ||    
T  33049337 caatttcggctgttacagatgccgcgttatggattgtggtcgtcgaggtgtgaattaatcaaaacattgcacaactcttaaataatgtataataact-ta 33049239  T
Q  207 aataacttaaactagagata 226  Q
    |||||||| || ||||||||    
T  33049238 aataacttgaaatagagata 33049219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 31743048 - 31742982
Alignment:
Q  160 aattaatcacaacattgcacaactcttaaataatg-atagcaactgtaaataacttaaactagagata 226  Q
    |||||||||||||||||||||  |||||||||||| |||  |||| ||||||||||||| ||||||||    
T  31743048 aattaatcacaacattgcacagttcttaaataatgtataataact-taaataacttaaattagagata 31742982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 45435583 - 45435503
Alignment:
Q  160 aattaatcacaacattgcacaactcttaaataatgatagcaactgtaa-ataacttaaactagagataaagttggagttct 239  Q
    ||||||| |||| ||||||||||||||||||||| |||| ||  | || |||||||||| | |||||||| ||| ||||||    
T  45435583 aattaataacaatattgcacaactcttaaataataatagtaatggaaatataacttaaattggagataaatttgaagttct 45435503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 2e-46; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 108 - 282
Target Start/End: Complemental strand, 34664989 - 34664816
Alignment:
Q  108 caattttggatgttaccgatgttgcattacggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaa 207  Q
    |||||| || |||||| |||||||||||| |||||||||||||  |||||| ||||||| |||||||||||||||| |||||||||||||| ||| ||||    
T  34664989 caatttcggttgttacggatgttgcattatggattgtggttgtcacggtatgaattaattacaacattgcacaacttttaaataatgatagtaac-gtaa 34664891  T
Q  208 ataacttaaactagagataaagttggagttctaaactaggtaaggagataacattatgtaatttatgatcaaata 282  Q
    ||||||||||||| ||| | |  |||||||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  34664890 ataacttaaactatagacagatatggagttctaaactagataagaagataacgttatgtaatttatgatcaaata 34664816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 146 - 282
Target Start/End: Complemental strand, 12990687 - 12990553
Alignment:
Q  146 gttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagataaagttggagttctaaacta 245  Q
    ||||| ||||| | ||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| | | ||| ||||||||||||    
T  12990687 gttgtcgcggtgtgaattagtcacaacattgcacaactcttaaataatgatagtaact-taaataacttaaactagagaaagatttgaagttctaaacta 12990589  T
Q  246 ggtaaggagataacattatgtaatttatgatcaaata 282  Q
    | ||||||||||| |||||||||||||||||||||||    
T  12990588 gataaggagataa-attatgtaatttatgatcaaata 12990553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 135 - 278
Target Start/End: Complemental strand, 9457798 - 9457660
Alignment:
Q  135 tacggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagataaagttgga 234  Q
    ||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||   | | || ||    
T  9457798 tacggattgcggttgttgcggtgtgaattaatcacaacattgcacaactcttaaataatgatagtaact-taaataacttaaactaga---agattttga 9457703  T
Q  235 gttctaaactaggtaaggagataacattatgtaatttatgatca 278  Q
    ||||||||| ||||||||||||||| ||  ||||||||||||||    
T  9457702 gttctaaacaaggtaaggagataac-ttgagtaatttatgatca 9457660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 135 - 278
Target Start/End: Complemental strand, 9461895 - 9461757
Alignment:
Q  135 tacggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagataaagttgga 234  Q
    ||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||   | | || ||    
T  9461895 tacggattgcggttgttgcggtgtgaattaatcacaacattgcacaactcttaaataatgatagtaact-taaataacttaaactaga---agattttga 9461800  T
Q  235 gttctaaactaggtaaggagataacattatgtaatttatgatca 278  Q
    ||||||||| ||||||||||||||| ||  ||||||||||||||    
T  9461799 gttctaaacaaggtaaggagataac-ttgagtaatttatgatca 9461757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 32617559 - 32617700
Alignment:
Q  138 ggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagataaagttggagtt 237  Q
    |||||| |||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| |||| | |||||||||||||||||| |   || |||||    
T  32617559 ggattgcggttgtcgcggtgtaaattaatcacaacattgcacaactcttaaataacgatagtaact-tgaataacttaaactagagaaatctttagagtt 32617657  T
Q  238 ctaaactaggtaaggagataacattatgtaatttatgatcaaata 282  Q
     |||||||| |||||||||||| ||||||||||||||||||||||    
T  32617658 -taaactagataaggagataac-ttatgtaatttatgatcaaata 32617700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 14081723 - 14081785
Alignment:
Q  161 attaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagata 226  Q
    |||||||||||||||||| |||| ||||||||||  ||||||| ||||||||||||||||||||||    
T  14081723 attaatcacaacattgcataacttttaaataatg--agcaact-taaataacttaaactagagata 14081785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 26828661 - 26828605
Alignment:
Q  125 gatgttgcattacggattgtggttgttgcggtataaattaatcacaacattgcacaa 181  Q
    ||||||||||||| ||||||  |||| ||||| ||||||||||||||||||||||||    
T  26828661 gatgttgcattacagattgttattgtcgcggtgtaaattaatcacaacattgcacaa 26828605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 1e-44; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 87 - 258
Target Start/End: Complemental strand, 5430380 - 5430210
Alignment:
Q  87 gcggtagcgtatagaattttacaattttggatgttaccgatgttgcattacggattgtggttgttgcggtataaattaatcacaacattgcacaactctt 186  Q
    ||||| |||||||  ||||||| |||| || |||||| ||||||||||||| |||||||||||| ||||| | |||||||||||| ||||||||||||||    
T  5430380 gcggtcgcgtatatgattttacgatttcggttgttacggatgttgcattacagattgtggttgtcgcggtgtgaattaatcacaatattgcacaactctt 5430281  T
Q  187 aaataatgatagcaactgtaaataacttaaactagagataaagttggagttctaaactaggtaaggagataa 258  Q
    |||||||||||| |||  |||||||||||||||||||||| ||||||| ||||||| ||| |||||||||||    
T  5430280 aaataatgatagtaac-ataaataacttaaactagagatagagttggatttctaaagtagataaggagataa 5430210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 108 - 282
Target Start/End: Original strand, 17988946 - 17989118
Alignment:
Q  108 caattttggatgttaccgatgttgcattacggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaa 207  Q
    |||||| || |||||| | ||||||  ||||||||| |||||| | ||| | |||||||||||| |||||||||||||||||||||||||| |||| |||    
T  17988946 caatttcggctgttacgggtgttgcgatacggattgcggttgtcgaggtgtgaattaatcacaatattgcacaactcttaaataatgatagtaact-taa 17989044  T
Q  208 ataacttaaactagagataaagttggagttctaaactaggtaaggagataacattatgtaatttatgatcaaata 282  Q
    ||||||||||||||| | | | ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||    
T  17989045 ataacttaaactagaaaaagatttggagttctaaactagataaggagataa-attatataatttatgatcaaata 17989118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 282
Target Start/End: Original strand, 37794641 - 37794782
Alignment:
Q  139 gattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagataaagttggagttc 238  Q
    ||||| |||||| | ||| | ||||||||||||||||||||||||||||||||||||||| |||| || |||||||| || ||||| | | |||||||||    
T  37794641 gattgcggttgtcgtggtgtgaattaatcacaacattgcacaactcttaaataatgatagtaact-tagataacttagaccagagaaagatttggagttc 37794739  T
Q  239 taaactaggtaaggagataacattatgtaatttatgatcaaata 282  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  37794740 taaactagataaggagataac-ttatgtaatttatgatcaaata 37794782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 19263911 - 19263826
Alignment:
Q  140 attgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagata 226  Q
    |||| |||||||||| | | |||||||||||||||||||||| |||||||||||||||| |||  ||||||||||| ||||||||||    
T  19263911 attgcggttgttgcgctgtgaattaatcacaacattgcacaattcttaaataatgatagtaac-ataaataacttatactagagata 19263826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 35016319 - 35016388
Alignment:
Q  145 ggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataactta 215  Q
    |||||| ||||| | |||||||||||||||| |||||||||||||||||||||| |||| |||||||||||    
T  35016319 ggttgtcgcggtgtgaattaatcacaacattacacaactcttaaataatgatagtaact-taaataactta 35016388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 35016461 - 35016512
Alignment:
Q  230 ttggagttctaaactaggtaaggagataacattatgtaatttatgatcaaata 282  Q
    ||||| ||||||||||| |||||||||||| |||| |||||||||||||||||    
T  35016461 ttggaattctaaactagataaggagataac-ttatataatttatgatcaaata 35016512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 160 - 281
Target Start/End: Complemental strand, 9177751 - 9177634
Alignment:
Q  160 aattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagataaagttggagttctaaactaggtaaggagataac 259  Q
    ||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||| ||||| | |||||||||||||||||||   ||||||||    
T  9177751 aattaatcacaacattgcacaactcttgaataatgatagtaac-gtaaataacttaaactaaagatagatttggagttctaaactaggt---gagataac 9177656  T
Q  260 attatgtaatttatgatcaaat 281  Q
    ||||||||||||||||||||||    
T  9177655 attatgtaatttatgatcaaat 9177634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 260
Target Start/End: Original strand, 26660602 - 26660726
Alignment:
Q  135 tacggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagataaagttgga 234  Q
    |||| |||| ||||||  |||| | ||||||||||||||||||||||||||||||| |  |||| |||| ||||||| |||||||| ||| | | |||||    
T  26660602 tacgaattgcggttgtcacggtgtgaattaatcacaacattgcacaactcttaaatcacaatagtaact-taaataatttaaactaaagaaagatttgga 26660700  T
Q  235 gttctaaactaggtaaggagataaca 260  Q
    |||||||||||   ||||||||||||    
T  26660701 gttctaaactatacaaggagataaca 26660726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 260
Target Start/End: Original strand, 26766573 - 26766697
Alignment:
Q  135 tacggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagataaagttgga 234  Q
    |||| |||| ||||||  |||| | ||||||||||||||||||||||||||||||| |  |||| |||| ||||||| |||||||| ||| | | |||||    
T  26766573 tacgaattgcggttgtcacggtgtgaattaatcacaacattgcacaactcttaaatcacaatagtaact-taaataatttaaactaaagaaagatttgga 26766671  T
Q  235 gttctaaactaggtaaggagataaca 260  Q
    |||||||||||   ||||||||||||    
T  26766672 gttctaaactatacaaggagataaca 26766697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 10117257 - 10117207
Alignment:
Q  230 ttggagttctaaactaggtaaggagataacattatgtaatttatgatcaaata 282  Q
    ||||||||||||||||| ||||||||| |  ||||||||||||||||||||||    
T  10117257 ttggagttctaaactagataaggagatta--ttatgtaatttatgatcaaata 10117207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 9771984 - 9771928
Alignment:
Q  125 gatgttgcattacggattgtggttgttgcggtataaattaatcacaacattgcacaa 181  Q
    |||||||| ||| |||||||||| || ||| | | ||||||||||||||||||||||    
T  9771984 gatgttgccttatggattgtggtcgtcgcgttgtgaattaatcacaacattgcacaa 9771928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 6e-37; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 55606257 - 55606377
Alignment:
Q  160 aattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagataaagttggagttctaaactaggtaaggagataac 259  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| | | ||||||||||||||||  |||||| |||||    
T  55606257 aattaatcacaacattgcacaactcttaaataatgatagtaact-taaataacttaaactagagaaagatttggagttctaaactatataaggaaataac 55606355  T
Q  260 attatgtaatttatgatcaaata 282  Q
     ||||||||||||||||||||||    
T  55606356 -ttatgtaatttatgatcaaata 55606377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 118 - 279
Target Start/End: Original strand, 38411837 - 38411997
Alignment:
Q  118 tgttaccgatgttgcattacggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaa 217  Q
    |||||| ||| ||| ||||  ||||| |||||| ||| | | |||||||||||||||||||||||| ||||| |||||||| || ||||||||||||||     
T  38411837 tgttacagatattgtattatagattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaacaatgataggaa-tgtaaataacttaac 38411935  T
Q  218 ctagagataaagttggagttctaaactaggtaaggagataacattatgtaatttatgatcaa 279  Q
    ||||||||| | ||||||||||||||||| |||||| ||||||||||||||||||| |||||    
T  38411936 ctagagatagatttggagttctaaactagataaggaaataacattatgtaatttataatcaa 38411997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 127 - 282
Target Start/End: Original strand, 13198058 - 13198211
Alignment:
Q  127 tgttgcattacggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagata 226  Q
    |||||| ||| |||||||| |||| ||||| | |||||||||||||||||||||||||||||| |||||| | |||| |  ||||||||||||||| | |    
T  13198058 tgttgcgttaaggattgtgattgtcgcggtgtgaattaatcacaacattgcacaactcttaaacaatgatcgtaact-ttgataacttaaactagacaaa 13198156  T
Q  227 aagttggagttctaaactaggtaaggagataacattatgtaatttatgatcaaata 282  Q
     | ||||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  13198157 gatttggagttctaaattagataaggagataac-ttatgtaatttatgatcaaata 13198211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 282
Target Start/End: Complemental strand, 28147156 - 28147021
Alignment:
Q  145 ggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagataaagttggagttctaaact 244  Q
    |||||| ||||| | ||||||||||||||||||||||||||||||||||  || ||||| ||||||||||||||||| || | | ||||| ||||||| |    
T  28147156 ggttgtcgcggtgtgaattaatcacaacattgcacaactcttaaataatattatcaact-taaataacttaaactagggaaagatttggaattctaaatt 28147058  T
Q  245 aggtaaggagataacattatgtaatttatgatcaaata 282  Q
    || |||||||||||| ||||||||||||||||||||||    
T  28147057 agataaggagataac-ttatgtaatttatgatcaaata 28147021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 135 - 282
Target Start/End: Complemental strand, 25968183 - 25968038
Alignment:
Q  135 tacggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagataaagttgga 234  Q
    ||||||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||||  ||| || ||||||||||||||||| | |  ||      
T  25968183 tacggattgcggttgtcgcggtgtgaattaatcacaacattgcacaactcttaaataatgatagtcact-tacataacttaaactagagaaagatctgac 25968085  T
Q  235 gttctaaactaggtaaggagataacattatgtaatttatgatcaaata 282  Q
    |||||||||||| |||| ||||||| ||||||||||||| ||||||||    
T  25968084 gttctaaactagataagaagataac-ttatgtaatttattatcaaata 25968038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 282
Target Start/End: Original strand, 46308386 - 46308483
Alignment:
Q  184 cttaaataatgatagcaactgtaaataacttaaact-agagataaagttggagttctaaactaggtaaggagataacattatgtaatttatgatcaaata 282  Q
    ||||||||||||||| |||| ||||||||||||| | ||||| | | || |||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  46308386 cttaaataatgatagtaact-taaataacttaaattgagagagagatttagagttctaaactaactaaggagataac-ttatgtaatttatgatcaaata 46308483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 11440760 - 11440664
Alignment:
Q  126 atgttgcattacggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaa---taatgatagcaactgtaaataacttaaacta 220  Q
    ||||||| ||| ||||||| ||||| ||||| | |||||||||||||||||  |||||||||||   ||||||||| || ||||||||||||||||||    
T  11440760 atgttgcgttatggattgttgttgtcgcggtgtgaattaatcacaacattgttcaactcttaaataataatgatagtaa-tgtaaataacttaaacta 11440664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 29866223 - 29866152
Alignment:
Q  118 tgttaccgatgttgcattacggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaa 189  Q
    |||||| |||||||| |||| |||||||||||| | ||| | |||||||||||||||||||||| |||||||    
T  29866223 tgttactgatgttgcgttacagattgtggttgtcgtggtgtgaattaatcacaacattgcacaaatcttaaa 29866152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 46824604 - 46824669
Alignment:
Q  116 gatgttaccgatgttgcattacggattgtggttgttgcggtataaattaatcacaacattgcacaa 181  Q
    |||||||| ||||||||||||| ||||| | | || ||||| |||||||||||||||| |||||||    
T  46824604 gatgttacagatgttgcattacagattgcgatcgtcgcggtgtaaattaatcacaacaatgcacaa 46824669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 11440670 - 11440627
Alignment:
Q  239 taaactaggtaaggagataacattatgtaatttatgatcaaata 282  Q
    |||||||  |||| ||||||||||||||||||||||||||||||    
T  11440670 taaactatataagaagataacattatgtaatttatgatcaaata 11440627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 187
Target Start/End: Original strand, 49583108 - 49583177
Alignment:
Q  118 tgttaccgatgttgcattacggattgtggttgttgcggtataaattaatcacaacattgcacaactctta 187  Q
    |||||| ||||||||||| || ||||||||||| || |  | ||||||||||||||||||| || |||||    
T  49583108 tgttacagatgttgcattgcgcattgtggttgtcgcagcgtgaattaatcacaacattgcataagtctta 49583177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 5e-34; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 282
Target Start/End: Original strand, 23489965 - 23490100
Alignment:
Q  145 ggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagataaagttggagttctaaact 244  Q
    |||||||||||| | ||||||||||||||||| |||||||||||||| |||||| |||| || | ||| ||||||||||| | | |||||||||||||||    
T  23489965 ggttgttgcggtgtgaattaatcacaacattgtacaactcttaaatactgatagtaact-tagacaacataaactagagaaagatttggagttctaaact 23490063  T
Q  245 aggtaaggagataacattatgtaatttatgatcaaata 282  Q
    || |||||||||||| ||||||||||||||||||||||    
T  23490064 agataaggagataac-ttatgtaatttatgatcaaata 23490100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 13402267 - 13402182
Alignment:
Q  134 ttacggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaacta 220  Q
    |||||||||| |||||| ||||| | |||||||||||||||| |||||||||||||||||||||| ||  |||||||||||||||||    
T  13402267 ttacggattgcggttgtcgcggtgtgaattaatcacaacattacacaactcttaaataatgatagtaa-ggtaaataacttaaacta 13402182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 220
Target Start/End: Complemental strand, 13396965 - 13396884
Alignment:
Q  138 ggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaacta 220  Q
    |||||| || ||| ||||| | |||||||||||||||| |||||||||||||||||||||| ||  |||||||||||||||||    
T  13396965 ggattgcggctgtcgcggtgtgaattaatcacaacattacacaactcttaaataatgatagtaa-ggtaaataacttaaacta 13396884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 7154302 - 7154400
Alignment:
Q  183 tcttaaataatgatagcaactgtaaataacttaaactagagataaagttggagttctaaactaggtaaggagataacattatgtaatttatgatcaaata 282  Q
    |||||||||||||||  | | ||||||||||||||| | ||||| | || ||||||| ||  || ||||||||||  |||||||||| ||||||||||||    
T  7154302 tcttaaataatgataatacc-gtaaataacttaaaccatagatagattttgagttctgaatcagataaggagatataattatgtaatatatgatcaaata 7154400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 197
Target Start/End: Complemental strand, 14370842 - 14370805
Alignment:
Q  160 aattaatcacaacattgcacaactcttaaataatgata 197  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  14370842 aattaatcacaacattgcacaactcttacttaatgata 14370805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 7154267 - 7154299
Alignment:
Q  160 aattaatcacaacattgcacaactcttaaataa 192  Q
    |||||||||||||||||||||| ||||||||||    
T  7154267 aattaatcacaacattgcacaagtcttaaataa 7154299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 5e-34; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 129 - 282
Target Start/End: Original strand, 11783386 - 11783538
Alignment:
Q  129 ttgcattacggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagataaa 228  Q
    |||| ||||||||||||||||| ||  | | || |||| ||||||||||||||||||||||||||||||| |||  |||| ||||||||| ||||||| |    
T  11783386 ttgcgttacggattgtggttgtcgctttgtgaagtaattacaacattgcacaactcttaaataatgatagtaaca-taaagaacttaaacaagagataga 11783484  T
Q  229 gttggagttctaaactaggtaaggagataacattatgtaatttatgatcaaata 282  Q
     |||||||||||||||||  ||||||| |||||| |||||||||||||||||||    
T  11783485 tttggagttctaaactagacaaggagacaacattgtgtaatttatgatcaaata 11783538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 160 - 282
Target Start/End: Complemental strand, 7299266 - 7299146
Alignment:
Q  160 aattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagataaagttggagttctaaactaggtaaggagataac 259  Q
    |||||| |||||||||| ||||||||||||||| ||||| ||| ||||||||||||||||||||||| | ||| | ||||||| ||| ||||||||||||    
T  7299266 aattaaccacaacattgtacaactcttaaataacgatagtaac-gtaaataacttaaactagagatagatttgaa-ttctaaagtagataaggagataac 7299169  T
Q  260 attatgtaatttatgatcaaata 282  Q
    ||||||||||||||||| |||||    
T  7299168 attatgtaatttatgattaaata 7299146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 53527224 - 53527191
Alignment:
Q  160 aattaatcacaacattgcacaactcttaaataat 193  Q
    |||||||||||||||||||||||| |||||||||    
T  53527224 aattaatcacaacattgcacaacttttaaataat 53527191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 32104179 - 32104227
Alignment:
Q  133 attacggattgtggttgttgcggtataaattaatcacaacattgcacaa 181  Q
    |||||||||||| || || ||||| ||||||||||||||||| ||||||    
T  32104179 attacggattgttgtagtcgcggtgtaaattaatcacaacatggcacaa 32104227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 282
Target Start/End: Original strand, 39426082 - 39426220
Alignment:
Q  141 ttgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagataaagttggagttcta 240  Q
    |||| ||||| ||||| | ||||||| ||||||||||||||||| || ||| |||||| || ||||||||||||||| || ||||| | ||||| |||||    
T  39426082 ttgtagttgtcgcggtgtgaattaattacaacattgcacaactcatacatattgatagtaa-tgtaaataacttaaa-tatagatatatttgga-ttcta 39426178  T
Q  241 aactaggtaaggagataacattatgtaatttatgatcaaata 282  Q
    |||||  ||||||||| |||||||||||||||||||||||||    
T  39426179 aactatataaggagatgacattatgtaatttatgatcaaata 39426220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 278
Target Start/End: Complemental strand, 41283674 - 41283534
Alignment:
Q  135 tacggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagataaagttgga 234  Q
    |||||| | ||||||| | ||| | |||||||||||||||||||||||| || ||||| ||||| |||  |||||||||||||||||||| | | ||| |    
T  41283674 tacggagtatggttgtcgtggtgtgaattaatcacaacattgcacaacttttgaataaagatagtaaca-taaataacttaaactagagaaagatttgaa 41283576  T
Q  235 gttctaaactaggtaaggagataacattatgtaatttatgatca 278  Q
    |||||||||||| |||||||||||| |||| |||||||||||||    
T  41283575 gttctaaactagataaggagataac-ttat-taatttatgatca 41283534  T

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Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 22927075 - 22927194
Alignment:
Q  160 aattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagataaagttggagttctaaactaggtaaggagataac 259  Q
    |||||||||||||||||| ||||||||||||||||| || |||  |||||||||||||||||||||| | | |  ||||||||||||  || ||||||||    
T  22927075 aattaatcacaacattgcccaactcttaaataatgaaagtaac-ataaataacttaaactagagatagattcgaggttctaaactagacaatgagataac 22927173  T
Q  260 attatgtaatttatgatcaaat 281  Q
    | ||||| ||||||||||||||    
T  22927174 a-tatgtgatttatgatcaaat 22927194  T

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Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 36491687 - 36491560
Alignment:
Q  118 tgttaccgatgttgcattacggattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaa 217  Q
    |||||| ||||||||| ||||||||  ||||||  |||| | ||||||||| ||||||||| || |||||||| ||||||| ||  ||||||||| ||||    
T  36491687 tgttacggatgttgcactacggattacggttgtcacggtgtgaattaatcataacattgcaaaattcttaaatgatgatagtaaa-gtaaataacataaa 36491589  T
Q  218 ctagagataaagttggagttctaaactag 246  Q
    ||||||||| | || ||||||||||||||    
T  36491588 ctagagatagattttgagttctaaactag 36491560  T

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Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 282
Target Start/End: Original strand, 13424629 - 13424767
Alignment:
Q  139 gattgtggttgttgcggtataaattaatcacaacattgcacaactcttaaataatgatagcaactgtaaataacttaaactagagataaagttggagttc 238  Q
    |||||| ||||| | ||| | ||||||||||||||||||||||||||||||||||||    |||| ||||||||||||| |||||| | | || || |||    
T  13424629 gattgtagttgtcgtggtgtgaattaatcacaacattgcacaactcttaaataatga----aact-taaataacttaaaatagagaaagatttagaattc 13424723  T
Q  239 taaactag-gtaaggagataacattatgtaatttatgatcaaata 282  Q
    |||| |||  |||||||||||| ||| || |||||||||||||||    
T  13424724 taaaatagattaaggagataac-ttacgtgatttatgatcaaata 13424767  T

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Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 37247715 - 37247652
Alignment:
Q  118 tgttaccgatgttgcattacggattgtggttgttgcggtataaattaatcacaacattgcacaa 181  Q
    |||||| |||||||| |||| |||||||||||| ||||| | |||||||||||||| |||||||    
T  37247715 tgttacggatgttgcgttacagattgtggttgtcgcggtgtgaattaatcacaacaatgcacaa 37247652  T

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Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 31219520 - 31219561
Alignment:
Q  140 attgtggttgttgcggtataaattaatcacaacattgcacaa 181  Q
    |||||||| || ||||||||||||| ||||||||||||||||    
T  31219520 attgtggtagtcgcggtataaattactcacaacattgcacaa 31219561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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