View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19467_low_34 (Length: 292)
Name: NF19467_low_34
Description: NF19467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19467_low_34 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 5 - 286
Target Start/End: Complemental strand, 8061195 - 8060915
Alignment:
| Q |
5 |
gctacataattctcttagcgttatgggatgtgaggaagaagaagtgaatgaatcttgatgatcaagatccccttatttatatagttcaatactagaagca |
104 |
Q |
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| T |
8061195 |
gctatatagttctcttgacgttatggaatgggaggaagaagaagtgaatgaatcgtgatgatcaagatccc-ttatttatatagttcaatactagaagca |
8061097 |
T |
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| Q |
105 |
gtggatgagtagagagtggaggatccgggggtctcccactactccacctcttctagacttaatcaaagcctaatgtgttttatataagaaatatttagtc |
204 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||| |
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| T |
8061096 |
gtggatgagtagagagtggaggatcctggggtctcccactactccacctcttctagacttaatcgaagcttaatgtgttttatataagaaatctttagtc |
8060997 |
T |
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| Q |
205 |
aaagtatgaggtgtcttgaccacgtggacagagtcgtcccttcttctgaaggggccacgtctattccttagttggcataatt |
286 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8060996 |
aaagtatgaggtgtcttgaccacgtagacagagtcgtcccttcttctgaaggggccacgtctattccttagttggcataatt |
8060915 |
T |
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