View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19467_low_49 (Length: 250)
Name: NF19467_low_49
Description: NF19467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19467_low_49 |
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Alignment Details
Target: chr4 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 43 - 243
Target Start/End: Original strand, 35043255 - 35043455
Alignment:
| Q |
43 |
accgcaccgttacggctgccttcatccatttctaccggacagatcatttacaataacctcaggggagatgacggtaatttcccctaattaaaatttttat |
142 |
Q |
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| T |
35043255 |
accgcaccgttatggctgccttcatccatttctaccggacagatcatttacaataacctcaggggagatgacggtaatttcccctaattaaaatttttat |
35043354 |
T |
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| Q |
143 |
atnnnnnnntgacaccttaaattaatttatatattattatatgtagggttaaattaaatgatatttcactcttccttttaaataagttttggttcatatc |
242 |
Q |
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|| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35043355 |
ataaaaaaatgacaccttaaattaatttatatattattatatgcagggttaaattacatgatatttcactcttccttttaaataagttttggttcatatc |
35043454 |
T |
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| Q |
243 |
t |
243 |
Q |
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| T |
35043455 |
t |
35043455 |
T |
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