View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19467_low_53 (Length: 237)
Name: NF19467_low_53
Description: NF19467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19467_low_53 |
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Alignment Details
Target: chr7 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 11575241 - 11575465
Alignment:
| Q |
1 |
atgtattctgttatataatatgaaatatttcaatttgttgtnnnnnnnn----ttgcattatttaattattaacatatacacacataaatacaaattaga |
96 |
Q |
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| T |
11575241 |
atgtattctgttatataatatgaaatatttcaatttgttgtaaaaaaacaaaattgcattacttaattattaacatatacacacataaatttaaattaga |
11575340 |
T |
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| Q |
97 |
tgtattgtttatcccctatatgtaagctaaattaaaggttcaccacaccgtttagagaatggacttgcatcatagtgatagtgttgttagacatcccaaa |
196 |
Q |
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|||||||||||||||||||||||||| | |||||||||||||||||| ||||||| |||| |||||||||||||| ||||||||||||||||||||||| |
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| T |
11575341 |
tgtattgtttatcccctatatgtaaggtcaattaaaggttcaccacatagtttagaaaatgcacttgcatcatagtaatagtgttgttagacatcccaaa |
11575440 |
T |
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| Q |
197 |
tactccctccattcttatatataag |
221 |
Q |
| |
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|||| ||||| ||||||||| |||| |
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| T |
11575441 |
tacttcctccgttcttatatgtaag |
11575465 |
T |
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