View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19469_high_5 (Length: 406)

Name: NF19469_high_5
Description: NF19469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19469_high_5
NF19469_high_5
[»] chr8 (23 HSPs)
chr8 (31-255)||(34812521-34812745)
chr8 (314-389)||(34812816-34812891)
chr8 (192-253)||(15078875-15078936)
chr8 (33-71)||(40393354-40393392)
chr8 (192-253)||(15167338-15167399)
chr8 (31-67)||(26192710-26192746)
chr8 (211-255)||(34789806-34789850)
chr8 (192-255)||(5942782-5942845)
chr8 (210-253)||(30674346-30674389)
chr8 (186-253)||(38009070-38009137)
chr8 (210-255)||(5973050-5973095)
chr8 (218-255)||(7944473-7944510)
chr8 (210-255)||(34048651-34048696)
chr8 (31-67)||(10309682-10309718)
chr8 (31-71)||(11231456-11231496)
chr8 (35-67)||(12676276-12676308)
chr8 (31-71)||(12770404-12770444)
chr8 (31-67)||(17072557-17072593)
chr8 (31-67)||(17575678-17575714)
chr8 (31-71)||(20872452-20872492)
chr8 (31-67)||(25139909-25139945)
chr8 (31-67)||(30942621-30942657)
chr8 (31-67)||(43847739-43847775)
[»] chr4 (27 HSPs)
chr4 (333-389)||(5892973-5893029)
chr4 (185-255)||(5893132-5893202)
chr4 (31-71)||(2629615-2629655)
chr4 (210-253)||(39329334-39329377)
chr4 (31-72)||(38848114-38848155)
chr4 (191-255)||(11906825-11906889)
chr4 (31-71)||(52556975-52557015)
chr4 (181-252)||(24614077-24614148)
chr4 (191-250)||(27112154-27112213)
chr4 (210-253)||(52468407-52468450)
chr4 (31-65)||(16556490-16556524)
chr4 (192-253)||(39655177-39655238)
chr4 (186-235)||(51691838-51691887)
chr4 (31-67)||(6637744-6637780)
chr4 (31-67)||(7768810-7768846)
chr4 (31-67)||(8690251-8690287)
chr4 (31-71)||(11294832-11294872)
chr4 (31-67)||(13578459-13578495)
chr4 (31-67)||(15507583-15507619)
chr4 (31-67)||(34353819-34353855)
chr4 (31-67)||(36008312-36008348)
chr4 (31-67)||(38690703-38690739)
chr4 (31-67)||(42411476-42411512)
chr4 (31-67)||(45350313-45350349)
chr4 (31-67)||(45359792-45359828)
chr4 (31-71)||(51890833-51890873)
chr4 (31-67)||(56555585-56555621)
[»] chr3 (26 HSPs)
chr3 (332-389)||(26316510-26316567)
chr3 (334-389)||(28586650-28586705)
chr3 (332-367)||(28575427-28575462)
chr3 (32-71)||(54408545-54408584)
chr3 (31-67)||(27119313-27119349)
chr3 (333-373)||(28580510-28580550)
chr3 (31-67)||(32508816-32508852)
chr3 (31-71)||(38949710-38949750)
chr3 (31-67)||(46336496-46336532)
chr3 (186-255)||(49393207-49393275)
chr3 (31-71)||(4227738-4227778)
chr3 (31-71)||(5174004-5174044)
chr3 (31-67)||(14868722-14868758)
chr3 (31-71)||(19222580-19222620)
chr3 (31-67)||(19879241-19879277)
chr3 (35-67)||(23653214-23653246)
chr3 (31-71)||(24303426-24303466)
chr3 (31-67)||(24559426-24559462)
chr3 (31-67)||(25883982-25884018)
chr3 (31-67)||(28951903-28951939)
chr3 (31-59)||(32080100-32080128)
chr3 (31-71)||(35849517-35849557)
chr3 (31-67)||(36331748-36331784)
chr3 (31-67)||(41121908-41121944)
chr3 (31-71)||(46817345-46817385)
chr3 (31-67)||(49146121-49146157)
[»] chr1 (17 HSPs)
chr1 (31-71)||(33843189-33843229)
chr1 (31-71)||(33950750-33950790)
chr1 (191-255)||(45758622-45758686)
chr1 (31-67)||(2903049-2903085)
chr1 (31-67)||(11907324-11907360)
chr1 (186-253)||(39134638-39134705)
chr1 (185-255)||(5533438-5533508)
chr1 (33-71)||(10632730-10632768)
chr1 (31-67)||(9768831-9768867)
chr1 (31-67)||(11405493-11405529)
chr1 (31-71)||(18607803-18607843)
chr1 (31-67)||(19424083-19424119)
chr1 (31-67)||(29491507-29491543)
chr1 (31-71)||(36666570-36666610)
chr1 (31-59)||(41833557-41833585)
chr1 (31-67)||(42490404-42490440)
chr1 (31-67)||(47642976-47643012)
[»] scaffold1320 (1 HSPs)
scaffold1320 (192-253)||(1471-1532)
[»] scaffold0889 (1 HSPs)
scaffold0889 (333-378)||(4274-4319)
[»] scaffold0870 (1 HSPs)
scaffold0870 (333-378)||(4478-4523)
[»] chr6 (14 HSPs)
chr6 (31-72)||(34574148-34574189)
chr6 (31-67)||(10377146-10377182)
chr6 (31-67)||(20568279-20568315)
chr6 (32-67)||(1488125-1488160)
chr6 (191-250)||(2477509-2477568)
chr6 (192-253)||(20611908-20611969)
chr6 (34-71)||(34268318-34268355)
chr6 (31-67)||(3294804-3294840)
chr6 (31-67)||(7897112-7897148)
chr6 (31-71)||(9689297-9689337)
chr6 (31-67)||(18904305-18904341)
chr6 (31-67)||(30833054-30833090)
chr6 (31-71)||(31952305-31952345)
chr6 (31-67)||(35190800-35190836)
[»] chr2 (19 HSPs)
chr2 (210-255)||(44914847-44914892)
chr2 (191-253)||(11952513-11952575)
chr2 (193-254)||(12694794-12694855)
chr2 (192-253)||(37182760-37182821)
chr2 (31-71)||(3596286-3596326)
chr2 (193-253)||(7742055-7742115)
chr2 (210-250)||(12133979-12134019)
chr2 (191-255)||(13800468-13800532)
chr2 (31-67)||(41699139-41699175)
chr2 (183-253)||(11912672-11912742)
chr2 (213-255)||(21665647-21665689)
chr2 (210-251)||(16097126-16097167)
chr2 (31-67)||(5947906-5947942)
chr2 (31-67)||(9796934-9796970)
chr2 (31-67)||(11133113-11133149)
chr2 (31-67)||(14307716-14307752)
chr2 (31-71)||(14802989-14803029)
chr2 (31-67)||(15939329-15939365)
chr2 (31-67)||(17777157-17777193)
[»] scaffold1033 (1 HSPs)
scaffold1033 (333-368)||(2988-3023)
[»] scaffold1029 (1 HSPs)
scaffold1029 (333-368)||(2988-3023)
[»] chr7 (15 HSPs)
chr7 (218-255)||(23020434-23020471)
chr7 (186-250)||(12419413-12419477)
chr7 (31-71)||(45284813-45284853)
chr7 (31-67)||(46716370-46716406)
chr7 (217-252)||(26917680-26917715)
chr7 (184-254)||(18201252-18201321)
chr7 (34-67)||(33248827-33248860)
chr7 (31-67)||(7392328-7392364)
chr7 (31-67)||(9712192-9712228)
chr7 (27-67)||(9992647-9992687)
chr7 (31-67)||(11808075-11808111)
chr7 (191-255)||(12981439-12981503)
chr7 (31-71)||(22548247-22548287)
chr7 (31-59)||(30152786-30152814)
chr7 (31-67)||(43635625-43635661)
[»] chr5 (19 HSPs)
chr5 (34-71)||(8571829-8571866)
chr5 (215-255)||(2530843-2530883)
chr5 (31-71)||(15106909-15106949)
chr5 (31-67)||(18872558-18872594)
chr5 (31-71)||(28822750-28822790)
chr5 (210-254)||(35080712-35080756)
chr5 (215-250)||(2412204-2412239)
chr5 (36-67)||(9688671-9688702)
chr5 (186-253)||(26718865-26718932)
chr5 (186-253)||(26988609-26988676)
chr5 (210-253)||(40794266-40794309)
chr5 (192-253)||(11242241-11242302)
chr5 (210-255)||(27530609-27530654)
chr5 (31-67)||(2029150-2029186)
chr5 (31-67)||(3740994-3741030)
chr5 (31-67)||(4674837-4674873)
chr5 (31-67)||(6735783-6735819)
chr5 (31-67)||(32158436-32158472)
chr5 (31-67)||(36045156-36045192)
[»] scaffold0022 (2 HSPs)
scaffold0022 (216-255)||(40203-40242)
scaffold0022 (216-255)||(138263-138302)
[»] scaffold0902 (1 HSPs)
scaffold0902 (210-255)||(4406-4451)
[»] scaffold0097 (1 HSPs)
scaffold0097 (192-253)||(39045-39106)
[»] scaffold0012 (1 HSPs)
scaffold0012 (214-255)||(206436-206477)
[»] scaffold0010 (1 HSPs)
scaffold0010 (31-68)||(236351-236388)
[»] scaffold0519 (1 HSPs)
scaffold0519 (31-71)||(2956-2996)
[»] scaffold0013 (1 HSPs)
scaffold0013 (31-67)||(245478-245514)


Alignment Details
Target: chr8 (Bit Score: 162; Significance: 2e-86; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 31 - 255
Target Start/End: Original strand, 34812521 - 34812745
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatttgcaagccaattgagttaagttcacggggacattcaagtcttaactttaaatcttaaaa 130  Q
    ||||||||| |||||||||||||||  || ||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||| ||||||    
T  34812521 gtggggtgtccggggttcgaaccccagcccctgcataaatttgcaagccaattgatttaagctcacggggacatt-aagtcttaactttaaattttaaaa 34812619  T
Q  131 aatacattttccttaatgaaaatacgcttaaa-tatttacagtaaggtgcaggtagcaggaccgttcctacaaatccgagggctcggctctgtaagtgaa 229  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||    
T  34812620 aatacattttccttaatgaaaatacgcttaaaatatttacagtaaggtgcagatagcaggaccgttcctacaaatccgggggctcgactctgtaagtgaa 34812719  T
Q  230 aagaggtccgtcataaaataaaaatg 255  Q
    |||||||  |||||||||||||||||    
T  34812720 aagaggtatgtcataaaataaaaatg 34812745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 314 - 389
Target Start/End: Original strand, 34812816 - 34812891
Alignment:
Q  314 gaacggtgtacaatgtttaacatatcattcccatttcttcaaaataatcatcttccttgatttattgtctctgtat 389  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34812816 gaacggtgtacaatgttcaacatatcattcccatttcttcaaaataatcatcttccttgagttattgtctctgtat 34812891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 15078936 - 15078875
Alignment:
Q  192 cgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaa 253  Q
    ||||||||| |||| || ||||| |||||||||||||||||| |||||| ||||||||||||    
T  15078936 cgttcctacgaatctgaaggctctgctctgtaagtgaaaagaagtccgtaataaaataaaaa 15078875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 40393392 - 40393354
Alignment:
Q  33 ggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  40393392 ggggtgttcggggttcgaaccccgacccctgcataaatt 40393354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 15167338 - 15167399
Alignment:
Q  192 cgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaa 253  Q
    ||||||||| |||| || ||||| |||||||||||||||| | |||||| ||||||||||||    
T  15167338 cgttcctacgaatctgaaggctctgctctgtaagtgaaaaaaagtccgtaataaaataaaaa 15167399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 26192710 - 26192746
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| |||||||||||||||||||||||||||    
T  26192710 gtggggtgtccggggttcgaaccccgacctctgcata 26192746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 34789806 - 34789850
Alignment:
Q  211 gctcggctctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    |||||||||| |||||||||| |||||||| ||||||||||||||    
T  34789806 gctcggctctataagtgaaaaaaggtccgtaataaaataaaaatg 34789850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 192 - 255
Target Start/End: Complemental strand, 5942845 - 5942782
Alignment:
Q  192 cgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    ||||||||| ||||||   |||||  |||||||||||||||||| |||| ||||||||||||||    
T  5942845 cgttcctacgaatccggaagctcgattctgtaagtgaaaagaggaccgtaataaaataaaaatg 5942782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 30674346 - 30674389
Alignment:
Q  210 ggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaa 253  Q
    ||||||||||||||||||||||||||  ||| ||||||||||||    
T  30674346 ggctcggctctgtaagtgaaaagaggctcgtaataaaataaaaa 30674389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 38009070 - 38009137
Alignment:
Q  186 caggaccgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaa 253  Q
    |||| |||||||||  ||||||  ||||||| ||||||| |||||||| |||||| ||||||||||||    
T  38009070 cagggccgttcctatgaatccggaggctcggttctgtaactgaaaagaagtccgtaataaaataaaaa 38009137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 255
Target Start/End: Original strand, 5973050 - 5973095
Alignment:
Q  210 ggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    |||| |||||||||| |||||||||||| || ||||||||||||||    
T  5973050 ggcttggctctgtaaatgaaaagaggtctgtaataaaataaaaatg 5973095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 7944473 - 7944510
Alignment:
Q  218 tctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  7944473 tctgtaattgaaaagaggtccgtaataaaataaaaatg 7944510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 255
Target Start/End: Original strand, 34048651 - 34048696
Alignment:
Q  210 ggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    |||||||||||||||||||||| ||  |||| ||||||||||||||    
T  34048651 ggctcggctctgtaagtgaaaatagacccgtaataaaataaaaatg 34048696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 10309682 - 10309718
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  10309682 gtggggtgttcggggtttgaaccccgacccctgcata 10309718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 11231496 - 11231456
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    ||||||||| |||||||||||||||| || |||||||||||    
T  11231496 gtggggtgtccggggttcgaaccccggcccctgcataaatt 11231456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 67
Target Start/End: Complemental strand, 12676308 - 12676276
Alignment:
Q  35 ggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||||||||||||||| |||||||||||    
T  12676308 ggtgttcggggttcgaaccccaacctctgcata 12676276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 12770444 - 12770404
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    ||||||||| |||||||||||||||| || |||||||||||    
T  12770444 gtggggtgtccggggttcgaaccccggcccctgcataaatt 12770404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 17072557 - 17072593
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||||||||||||||||||||||||| || |||||||    
T  17072557 gtggggtgttcggggttcgaaccccggcccctgcata 17072593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 17575714 - 17575678
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||||||||||||||||||||||||| || |||||||    
T  17575714 gtggggtgttcggggttcgaaccccggcccctgcata 17575678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 20872452 - 20872492
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    |||||||||||||| ||||||| |||||| |||||||||||    
T  20872452 gtggggtgttcgggattcgaactccgacccctgcataaatt 20872492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 25139909 - 25139945
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  25139909 gtgggatgttcggggttcgaaccccgacccctgcata 25139945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 30942621 - 30942657
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||||||||||||||||||||||||| || |||||||    
T  30942621 gtggggtgttcggggttcgaaccccggcccctgcata 30942657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 43847775 - 43847739
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||||||||||||||||||||||||| || |||||||    
T  43847775 gtggggtgttcggggttcgaaccccggcccctgcata 43847739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 5893029 - 5892973
Alignment:
Q  333 acatatcattcccatttcttcaaaataatcatcttccttgatttattgtctctgtat 389  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5893029 acatatcattcccatttcttcaaaataatcatcttccttgagttattgtctctgtat 5892973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 5893202 - 5893132
Alignment:
Q  185 gcaggaccgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    ||||| ||||||||||||||  |  ||||||||||||||||||||||||||||||| ||||||||||||||    
T  5893202 gcagggccgttcctacaaatttggaggctcggctctgtaagtgaaaagaggtccgtaataaaataaaaatg 5893132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 2629655 - 2629615
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  2629655 gtggggtgttcggggttcgaaccccgacccctgcataaatt 2629615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 39329334 - 39329377
Alignment:
Q  210 ggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaa 253  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||    
T  39329334 ggctcggttctgtaagtgaaaagaggtccgtaataaaataaaaa 39329377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 38848114 - 38848155
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaattt 72  Q
    ||||||||| ||||||||||||||||||| ||||||||||||    
T  38848114 gtggggtgtccggggttcgaaccccgacccctgcataaattt 38848155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 11906825 - 11906889
Alignment:
Q  191 ccgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    |||||||||| ||| ||  ||||||||| | |||||||||||||| |||| ||||||||||||||    
T  11906825 ccgttcctacgaattcggaggctcggctatataagtgaaaagaggcccgtaataaaataaaaatg 11906889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 52557015 - 52556975
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    |||||||||| |||||||||||||||||||||| |||||||    
T  52557015 gtggggtgttaggggttcgaaccccgacctctgtataaatt 52556975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 24614148 - 24614077
Alignment:
Q  181 ggtagcaggaccgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaa 252  Q
    ||||||||| |||||| ||| |||| |  || || |||||||||||||||||||| |||| |||||||||||    
T  24614148 ggtagcagggccgttcttacgaatctggaggttcagctctgtaagtgaaaagaggcccgtaataaaataaaa 24614077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 250
Target Start/End: Complemental strand, 27112213 - 27112154
Alignment:
Q  191 ccgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataa 250  Q
    ||||||||||||||| |  ||||||| |||||||||||||||||  |||| |||||||||    
T  27112213 ccgttcctacaaatctggaggctcggttctgtaagtgaaaagagacccgtaataaaataa 27112154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 52468450 - 52468407
Alignment:
Q  210 ggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaa 253  Q
    |||||||||||||| ||||||||||||| || ||||||||||||    
T  52468450 ggctcggctctgtaggtgaaaagaggtctgtaataaaataaaaa 52468407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 65
Target Start/End: Complemental strand, 16556524 - 16556490
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgca 65  Q
    ||||||||||||||||||||||||||||| |||||    
T  16556524 gtggggtgttcggggttcgaaccccgacccctgca 16556490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 39655177 - 39655238
Alignment:
Q  192 cgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaa 253  Q
    |||||||||||||| |  |||||| ||||||| |||||||||||  ||| ||||||||||||    
T  39655177 cgttcctacaaatctggaggctcgactctgtaggtgaaaagaggctcgtaataaaataaaaa 39655238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 51691838 - 51691887
Alignment:
Q  186 caggaccgttcctacaaatccgagggctcggctctgtaagtgaaaagagg 235  Q
    |||| |||||||||| ||||||  |||||||||||| |||||||||||||    
T  51691838 cagggccgttcctacgaatccggaggctcggctctgcaagtgaaaagagg 51691887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 6637744 - 6637780
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  6637744 gtggggtgttcggggttcgaaccccaacccctgcata 6637780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 7768810 - 7768846
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  7768810 gtggggtgtccggggttcgaaccccggcctctgcata 7768846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 8690287 - 8690251
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  8690287 gtggggtgtccggggttcgaaccccgacccctgcata 8690251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 11294832 - 11294872
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    ||||||||| |||||||||||||||| || |||||||||||    
T  11294832 gtggggtgtccggggttcgaaccccggcccctgcataaatt 11294872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 13578459 - 13578495
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  13578459 gtggggtgtccggggttcgaaccccgacccctgcata 13578495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 15507619 - 15507583
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  15507619 gtggggtgttcggggttcgaaccccaacccctgcata 15507583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 34353855 - 34353819
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  34353855 gtggggtgtccggggttcgaaccctgacctctgcata 34353819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 36008348 - 36008312
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||||||||||||||||||||||||| || |||||||    
T  36008348 gtggggtgttcggggttcgaaccccggcccctgcata 36008312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 38690739 - 38690703
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  38690739 gtggggtgtccggggttcgaaccccgacccctgcata 38690703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 42411476 - 42411512
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  42411476 gtggggtgtccggggttcgaaccccgacccctgcata 42411512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 45350349 - 45350313
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  45350349 gtggggtgtccggggttcgaactccgacctctgcata 45350313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 45359828 - 45359792
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  45359828 gtggggtgtccggggttcgaactccgacctctgcata 45359792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 51890873 - 51890833
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    ||||||||| |||||||||||||||| || |||||||||||    
T  51890873 gtggggtgtccggggttcgaaccccggcccctgcataaatt 51890833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 56555621 - 56555585
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||||||||||| |||||||||||||||| |||||||    
T  56555621 gtggggtgttcgaggttcgaaccccgacccctgcata 56555585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 26316567 - 26316510
Alignment:
Q  332 aacatatcattcccatttcttcaaaataatcatcttccttgatttattgtctctgtat 389  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||    
T  26316567 aacatatcattcccatttctccaaaataatcatcttccttgagttattttctctgtat 26316510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 28586705 - 28586650
Alignment:
Q  334 catatcattcccatttcttcaaaataatcatcttccttgatttattgtctctgtat 389  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||||||||||||    
T  28586705 catatcattcccatttcttcaaaacaatcatcttccttaagttattgtctctgtat 28586650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 367
Target Start/End: Complemental strand, 28575462 - 28575427
Alignment:
Q  332 aacatatcattcccatttcttcaaaataatcatctt 367  Q
    ||||||||||||||||||||||||||||||||||||    
T  28575462 aacatatcattcccatttcttcaaaataatcatctt 28575427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 71
Target Start/End: Original strand, 54408545 - 54408584
Alignment:
Q  32 tggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  54408545 tggggtgtccggggttcgaaccccgacctctgcataaatt 54408584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 27119349 - 27119313
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||||||||||||| ||||||||||||||||||||||    
T  27119349 gtggggtgttcgggattcgaaccccgacctctgcata 27119313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 373
Target Start/End: Complemental strand, 28580550 - 28580510
Alignment:
Q  333 acatatcattcccatttcttcaaaataatcatcttccttga 373  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  28580550 acatgtcattcccatttcttcaaaataaccatcttccttga 28580510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 32508816 - 32508852
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||||||||||||||||||||||| |||||||    
T  32508816 gtggggtgttcggggttcgaaccccgacccctgcata 32508852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 38949750 - 38949710
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    |||||||||||||||||||||||||| || |||||||||||    
T  38949750 gtggggtgttcggggttcgaaccccggcccctgcataaatt 38949710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 46336496 - 46336532
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||||||||||||||||||||||| |||||||    
T  46336496 gtggggtgttcggggttcgaaccccgacccctgcata 46336532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 49393275 - 49393207
Alignment:
Q  186 caggaccgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    ||||||||||||||| ||||||  ||||||||| |||||||||||| ||   ||| ||||||||||||||    
T  49393275 caggaccgttcctacgaatccggaggctcggct-tgtaagtgaaaaaagactcgtaataaaataaaaatg 49393207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 4227738 - 4227778
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    ||||||||| ||| ||||||||||||||| |||||||||||    
T  4227738 gtggggtgtccggagttcgaaccccgacccctgcataaatt 4227778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 5174004 - 5174044
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    |||||||||||||||||||||||||  || |||||||||||    
T  5174004 gtggggtgttcggggttcgaacccctgcccctgcataaatt 5174044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 14868758 - 14868722
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||||||||||||||||||||||||| || |||||||    
T  14868758 gtggggtgttcggggttcgaaccccggcccctgcata 14868722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 19222580 - 19222620
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    ||||||||| |||||||||||||||| || |||||||||||    
T  19222580 gtggggtgtccggggttcgaaccccggcccctgcataaatt 19222620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 19879277 - 19879241
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||||||||||||||||||||||||| || |||||||    
T  19879277 gtggggtgttcggggttcgaaccccggcccctgcata 19879241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 23653214 - 23653246
Alignment:
Q  35 ggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||||||||||||||||||| |||||||    
T  23653214 ggtgttcggggttcgaaccccgacccctgcata 23653246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 24303466 - 24303426
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    ||||||||| |||||||||||||||| || |||||||||||    
T  24303466 gtggggtgtccggggttcgaaccccggcccctgcataaatt 24303426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 24559462 - 24559426
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  24559462 gtggggtgtccggggttcgaaccccgacccctgcata 24559426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 25883982 - 25884018
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  25883982 gtggggtgtccggggttcgaaccccgacccctgcata 25884018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 28951939 - 28951903
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||||||||||||||||||||||| |||| |||||||    
T  28951939 gtggggtgttcggggttcgaaccctgacccctgcata 28951903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 59
Target Start/End: Complemental strand, 32080128 - 32080100
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacc 59  Q
    |||||||||||||||||||||||||||||    
T  32080128 gtggggtgttcggggttcgaaccccgacc 32080100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 35849557 - 35849517
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    |||||||||| ||||||||||||||| || |||||||||||    
T  35849557 gtggggtgtttggggttcgaaccccggcccctgcataaatt 35849517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 36331748 - 36331784
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  36331748 gtggggtgtccggggttcgaaccccgacccctgcata 36331784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 41121944 - 41121908
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  41121944 gtggggtgtccggggtttgaaccccgacctctgcata 41121908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 46817345 - 46817385
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    |||||||||||||||||| |||||| |||||| ||||||||    
T  46817345 gtggggtgttcggggttcaaaccccaacctctacataaatt 46817385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 49146157 - 49146121
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  49146157 gtggggtgtccggggttcgaaccccgacccctgcata 49146121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 33843189 - 33843229
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33843189 gtggggtgttcggggttcgaaccccgacctctgcataaatt 33843229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 33950790 - 33950750
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33950790 gtggggtgttcggggttcgaaccccgacctctgcataaatt 33950750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 45758686 - 45758622
Alignment:
Q  191 ccgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    |||||||||| |||||   ||||||||||||||||||||||||||||||  ||||||||||||||    
T  45758686 ccgttcctacgaatccagaggctcggctctgtaagtgaaaagaggtccgaaataaaataaaaatg 45758622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 2903049 - 2903085
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||||||||||||||||||||||||||||||||||||    
T  2903049 gtggggtgttcggggttcgaaccccgacctctgcata 2903085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 11907324 - 11907360
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||||||||||||||||||||||||| ||||||||||    
T  11907324 gtggggtgttcggggttcgaaccccggcctctgcata 11907360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 39134638 - 39134705
Alignment:
Q  186 caggaccgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaa 253  Q
    |||| |||||||||| ||||||  |||||||||| ||||||||||||||   ||| ||||||||||||    
T  39134638 cagggccgttcctacgaatccggaggctcggctccgtaagtgaaaagagactcgtaataaaataaaaa 39134705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 5533508 - 5533438
Alignment:
Q  185 gcaggaccgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    ||||| ||||| |||| ||||||  |||| | ||||||||||||||||||  |||| ||||||||||||||    
T  5533508 gcaggcccgtttctacgaatccggaggcttgactctgtaagtgaaaagagacccgtaataaaataaaaatg 5533438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 10632768 - 10632730
Alignment:
Q  33 ggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  10632768 ggggtgtccggggttcgaaccccgacccctgcataaatt 10632730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 9768831 - 9768867
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  9768831 gtggggtgtccggggttcgaaccccgacccctgcata 9768867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 11405529 - 11405493
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  11405529 gtggggtgtccggggttcgaaccccgacccctgcata 11405493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 18607803 - 18607843
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    |||||||||||||||||||||||||  || |||||||||||    
T  18607803 gtggggtgttcggggttcgaaccccagcccctgcataaatt 18607843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 19424119 - 19424083
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  19424119 gtggggtgtccggggttcgaaccccgacccctgcata 19424083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 29491543 - 29491507
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  29491543 gtggggtgtccggggttcgaaccccgacccctgcata 29491507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 36666570 - 36666610
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    ||||||||| |||||||||||||||| || |||||||||||    
T  36666570 gtggggtgtccggggttcgaaccccggcccctgcataaatt 36666610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 59
Target Start/End: Original strand, 41833557 - 41833585
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacc 59  Q
    |||||||||||||||||||||||||||||    
T  41833557 gtggggtgttcggggttcgaaccccgacc 41833585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 42490404 - 42490440
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  42490404 gtggggtgtccggggttcgaaccccgacccctgcata 42490440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 47642976 - 47643012
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  47642976 gtggagtgttcggggttcgaaccccggcctctgcata 47643012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 1532 - 1471
Alignment:
Q  192 cgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaa 253  Q
    ||||||||| |||| || ||||| |||||||||||||||||| |||||| ||||||||||||    
T  1532 cgttcctacgaatctgaaggctctgctctgtaagtgaaaagaagtccgtaataaaataaaaa 1471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0889 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0889
Description:

Target: scaffold0889; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 333 - 378
Target Start/End: Original strand, 4274 - 4319
Alignment:
Q  333 acatatcattcccatttcttcaaaataatcatcttccttgatttat 378  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||    
T  4274 acatattattcccatttcttcaaaataatcatcttccttgagttat 4319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0870 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0870
Description:

Target: scaffold0870; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 333 - 378
Target Start/End: Original strand, 4478 - 4523
Alignment:
Q  333 acatatcattcccatttcttcaaaataatcatcttccttgatttat 378  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||    
T  4478 acatattattcccatttcttcaaaataatcatcttccttgagttat 4523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 34574148 - 34574189
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaattt 72  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  34574148 gtggggtgttcggggtttgaaccccgacctctgcataaattt 34574189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 10377146 - 10377182
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||||||||||||||||||||||||| ||||||||||    
T  10377146 gtggggtgttcggggttcgaaccccggcctctgcata 10377182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 20568279 - 20568315
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||||||||||||||||||||||| |||||||    
T  20568279 gtggggtgttcggggttcgaaccccgacccctgcata 20568315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 1488160 - 1488125
Alignment:
Q  32 tggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||||||||||    
T  1488160 tggggtgtttggggttcgaaccccgacctctgcata 1488125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 250
Target Start/End: Original strand, 2477509 - 2477568
Alignment:
Q  191 ccgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataa 250  Q
    ||||||||||||||| |  ||||||| |||||||||||||||||  |||| |||||||||    
T  2477509 ccgttcctacaaatctggaggctcggttctgtaagtgaaaagagacccgtaataaaataa 2477568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 20611969 - 20611908
Alignment:
Q  192 cgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaa 253  Q
    ||||||||| ||| ||  |||||||||||||||||||||||||| || | | ||||||||||    
T  20611969 cgttcctacgaattcggaggctcggctctgtaagtgaaaagaggcccataaaaaaataaaaa 20611908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 34268355 - 34268318
Alignment:
Q  34 gggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  34268355 gggtgttcggggttcgaaccctgacccctgcataaatt 34268318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 3294840 - 3294804
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  3294840 gtggggtgtccggggttcgaaccccgacccctgcata 3294804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 7897112 - 7897148
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  7897112 gtggggtgtccggggttcgaaccccgacccctgcata 7897148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 9689297 - 9689337
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    ||||||||| | |||||||||||||||||||| ||||||||    
T  9689297 gtggggtgtccagggttcgaaccccgacctctacataaatt 9689337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 18904341 - 18904305
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  18904341 gtggggtgtccggggttcgaaccccgacccctgcata 18904305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 30833090 - 30833054
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  30833090 gtggggtgtccggggttcgaaccccgacccctgcata 30833054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 31952345 - 31952305
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    ||||||||| ||||||||||||||| ||| |||||||||||    
T  31952345 gtggggtgtccggggttcgaaccccaacccctgcataaatt 31952305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 35190836 - 35190800
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||||||||||||||||||||| |||||| |||||||    
T  35190836 gtggggtgttcggggttcgaactccgacccctgcata 35190800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 255
Target Start/End: Original strand, 44914847 - 44914892
Alignment:
Q  210 ggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||    
T  44914847 ggctcagctctgtaagtgaaaagaggtccgtaataaaataaaaatg 44914892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 11952513 - 11952575
Alignment:
Q  191 ccgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaa 253  Q
    |||||||||| |||| || ||||||| |||||||||||||||||  |||| ||||||||||||    
T  11952513 ccgttcctacgaatctgaaggctcggttctgtaagtgaaaagagacccgtaataaaataaaaa 11952575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 12694855 - 12694794
Alignment:
Q  193 gttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaat 254  Q
    |||| ||| ||||||  |||||||||||||||||||||||||  |||| |||||||||||||    
T  12694855 gttcttacgaatccggaggctcggctctgtaagtgaaaagagacccgtaataaaataaaaat 12694794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 37182821 - 37182760
Alignment:
Q  192 cgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaa 253  Q
    ||||||||  ||||||  |||||||||||||||||||||||||  |||| ||||||||||||    
T  37182821 cgttcctaagaatccggaggctcggctctgtaagtgaaaagagacccgtaataaaataaaaa 37182760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 3596326 - 3596286
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  3596326 gtggggtgtccggggttcgaaccccgacccctgcataaatt 3596286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 7742055 - 7742115
Alignment:
Q  193 gttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaa 253  Q
    |||||||| ||||||  || |||| |||||||||||||||||| |||| ||||||||||||    
T  7742055 gttcctacgaatccggaggttcggttctgtaagtgaaaagaggcccgtgataaaataaaaa 7742115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 12133979 - 12134019
Alignment:
Q  210 ggctcggctctgtaagtgaaaagaggtccgtcataaaataa 250  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  12133979 ggctcggttctgtaagtgaaaagaggtccgtaataaaataa 12134019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 13800468 - 13800532
Alignment:
Q  191 ccgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    ||||| |||| ||| ||| | |||| |||||||||||||||||||| ||| ||||||||||||||    
T  13800468 ccgtttctacgaattcgaagactcgactctgtaagtgaaaagaggttcgtaataaaataaaaatg 13800532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 41699175 - 41699139
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||||||||||||||||||||||| |||||||    
T  41699175 gtggggtgttcggggttcgaaccccgacccctgcata 41699139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 253
Target Start/End: Original strand, 11912672 - 11912742
Alignment:
Q  183 tagcaggaccgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaa 253  Q
    ||||||| || ||| ||||||| ||  ||||||||||| ||||||||||||  ||||| ||||||||||||    
T  11912672 tagcagggccattcttacaaattcggaggctcggctctataagtgaaaagatatccgtaataaaataaaaa 11912742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 255
Target Start/End: Original strand, 21665647 - 21665689
Alignment:
Q  213 tcggctctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    ||||||||||||||||||||||  |||| ||||||||||||||    
T  21665647 tcggctctgtaagtgaaaagagacccgtaataaaataaaaatg 21665689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 16097167 - 16097126
Alignment:
Q  210 ggctcggctctgtaagtgaaaagaggtccgtcataaaataaa 251  Q
    ||||||||||||||||||||||| || |||| ||||||||||    
T  16097167 ggctcggctctgtaagtgaaaagtggcccgtaataaaataaa 16097126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 5947942 - 5947906
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  5947942 gtggggtgtccggggttcgaaccccgacccctgcata 5947906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 9796970 - 9796934
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  9796970 gtggggtgtccggggttcgaaccccgacccctgcata 9796934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 11133149 - 11133113
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  11133149 gtggggtgtccggggttcgaaccccgacccctgcata 11133113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 14307716 - 14307752
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  14307716 gtggggtgttcggggttcgaacctcgacccctgcata 14307752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 14802989 - 14803029
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    ||||||| ||| ||||||||||||||||| |||||||||||    
T  14802989 gtggggttttcagggttcgaaccccgacccctgcataaatt 14803029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 15939365 - 15939329
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||||||||||||||||||  |||||||||||    
T  15939365 gtggggtgttcggggttcgaaccctaacctctgcata 15939329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 17777157 - 17777193
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  17777157 gtggggtgtccggggttcgaaccccgacccctgcata 17777193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1033 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1033
Description:

Target: scaffold1033; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 368
Target Start/End: Original strand, 2988 - 3023
Alignment:
Q  333 acatatcattcccatttcttcaaaataatcatcttc 368  Q
    ||||||||||||||||||||||||||||||||||||    
T  2988 acatatcattcccatttcttcaaaataatcatcttc 3023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1029 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1029
Description:

Target: scaffold1029; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 368
Target Start/End: Original strand, 2988 - 3023
Alignment:
Q  333 acatatcattcccatttcttcaaaataatcatcttc 368  Q
    ||||||||||||||||||||||||||||||||||||    
T  2988 acatatcattcccatttcttcaaaataatcatcttc 3023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000006; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 23020434 - 23020471
Alignment:
Q  218 tctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  23020434 tctgtaagtgaaaagaggtccgtaataaaataaaaatg 23020471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 12419413 - 12419477
Alignment:
Q  186 caggaccgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataa 250  Q
    |||| |||||||||  ||||||  ||||||||| |||||||||||||||| |||| |||||||||    
T  12419413 cagggccgttcctatgaatccggaggctcggctttgtaagtgaaaagaggcccgtaataaaataa 12419477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 45284813 - 45284853
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  45284813 gtggggtgtccggggttcgaaccccgacccctgcataaatt 45284853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 46716406 - 46716370
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||||| |||||||||||||||||||||||||    
T  46716406 gtggggtgttcagggttcgaaccccgacctctgcata 46716370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 252
Target Start/End: Original strand, 26917680 - 26917715
Alignment:
Q  217 ctctgtaagtgaaaagaggtccgtcataaaataaaa 252  Q
    |||||||||||||||||||||||| |||||||||||    
T  26917680 ctctgtaagtgaaaagaggtccgtaataaaataaaa 26917715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 18201321 - 18201252
Alignment:
Q  184 agcaggaccgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaat 254  Q
    |||||| ||||||| || ||||||  |||||||||||| ||||| ||||| |||||| |||||||||||||    
T  18201321 agcagggccgttcccacgaatccggaggctcggctctgcaagtg-aaagatgtccgtaataaaataaaaat 18201252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 33248827 - 33248860
Alignment:
Q  34 gggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||||| |||||||||||||||||||||||||||    
T  33248827 gggtgtccggggttcgaaccccgacctctgcata 33248860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 7392328 - 7392364
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||||||||||||||||| |||||| |||||||||||    
T  7392328 gtggggtgttcggggttcaaaccccaacctctgcata 7392364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 9712192 - 9712228
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  9712192 gtggggtgtccggggttcgaaccccgacccctgcata 9712228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 9992687 - 9992647
Alignment:
Q  27 aaatgtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||| |||||||||||||||||||||||||| |||| ||||    
T  9992687 aaatatggggtgttcggggttcgaaccccgatctctacata 9992647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 11808111 - 11808075
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  11808111 gtggggtgtccggggttcgaaccccgacccctgcata 11808075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 12981503 - 12981439
Alignment:
Q  191 ccgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    |||||||||| ||||||  || |||| |||||| |||||||||||  ||| ||||||||||||||    
T  12981503 ccgttcctacgaatccggaggttcggttctgtaggtgaaaagaggctcgtaataaaataaaaatg 12981439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 22548287 - 22548247
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    |||||||||||||||||||||||| |||| ||| |||||||    
T  22548287 gtggggtgttcggggttcgaaccctgacccctgtataaatt 22548247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 59
Target Start/End: Complemental strand, 30152814 - 30152786
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacc 59  Q
    |||||||||||||||||||||||||||||    
T  30152814 gtggggtgttcggggttcgaaccccgacc 30152786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 43635661 - 43635625
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  43635661 gtggggtgtccggggttcgaaccccgaccgctgcata 43635625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000006; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 8571866 - 8571829
Alignment:
Q  34 gggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    |||||||||||||||||||||||||| |||||||||||    
T  8571866 gggtgttcggggttcgaaccccgacccctgcataaatt 8571829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 2530843 - 2530883
Alignment:
Q  215 ggctctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  2530843 ggctctgtaagtgaaaagaggcccgtaataaaataaaaatg 2530883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 15106909 - 15106949
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    ||||||||| ||||||||||||||||||||||||| |||||    
T  15106909 gtggggtgtccggggttcgaaccccgacctctgcacaaatt 15106949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 18872594 - 18872558
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||||||||||||||||||||||| |||||||    
T  18872594 gtggggtgttcggggttcgaaccccgacccctgcata 18872558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 28822750 - 28822790
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  28822750 gtggggtgttcggggttcgaatcccgatctctgcataaatt 28822790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 35080712 - 35080756
Alignment:
Q  210 ggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaat 254  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||    
T  35080712 ggctcgactctgtaagtgaaaagagggccgtaataaaataaaaat 35080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 2412239 - 2412204
Alignment:
Q  215 ggctctgtaagtgaaaagaggtccgtcataaaataa 250  Q
    |||||||||||||||||||||||||| |||||||||    
T  2412239 ggctctgtaagtgaaaagaggtccgtaataaaataa 2412204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 67
Target Start/End: Original strand, 9688671 - 9688702
Alignment:
Q  36 gtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||||||||||||||||||||||||||    
T  9688671 gtgttcggggttcgaaccccgacctctgcata 9688702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 26718865 - 26718932
Alignment:
Q  186 caggaccgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaa 253  Q
    |||| |||||||||  ||||||  ||||||| |||||||||||||||||  |||| ||||||||||||    
T  26718865 cagggccgttcctatgaatccggaggctcggttctgtaagtgaaaagagacccgtaataaaataaaaa 26718932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 26988609 - 26988676
Alignment:
Q  186 caggaccgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaa 253  Q
    |||| |||||||||  ||||||  ||||||| |||||||||||||||||  |||| ||||||||||||    
T  26988609 cagggccgttcctatgaatccggaggctcggttctgtaagtgaaaagagacccgtaataaaataaaaa 26988676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 40794266 - 40794309
Alignment:
Q  210 ggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaa 253  Q
    ||||||||||||||||||||||||||  ||| ||||||||||||    
T  40794266 ggctcggctctgtaagtgaaaagaggctcgtaataaaataaaaa 40794309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 11242241 - 11242302
Alignment:
Q  192 cgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaa 253  Q
    ||||||||  ||||||  |||||||||||||||||||||||||   ||| ||||||||||||    
T  11242241 cgttcctatgaatccggaggctcggctctgtaagtgaaaagagactcgtaataaaataaaaa 11242302  T

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Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 27530654 - 27530609
Alignment:
Q  210 ggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    ||||||| ||| |||||||||||||| |||| ||||||||||||||    
T  27530654 ggctcggttctataagtgaaaagaggcccgtaataaaataaaaatg 27530609  T

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Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 2029150 - 2029186
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  2029150 gtggggtgttcggggttcgaatcccgacccctgcata 2029186  T

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Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 3741030 - 3740994
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  3741030 gtggggtgtccggggttcgaaccccgacccctgcata 3740994  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 4674837 - 4674873
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  4674837 gtggggtgtccggggttcgaaccccgacccctgcata 4674873  T

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Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 6735783 - 6735819
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||| |||||||||||||||||||||||| |||||||    
T  6735783 gtggagtgttcggggttcgaaccccgacccctgcata 6735819  T

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Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 32158436 - 32158472
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||||||||||||||||||||||||| || |||||||    
T  32158436 gtggggtgttcggggttcgaaccccggcccctgcata 32158472  T

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Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 36045156 - 36045192
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  36045156 gtggggtgtccggggttcgaaccccgacccctgcata 36045192  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 255
Target Start/End: Complemental strand, 40242 - 40203
Alignment:
Q  216 gctctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  40242 gctctgtaagtgaaaagaggttcgtaataaaataaaaatg 40203  T

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Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 255
Target Start/End: Complemental strand, 138302 - 138263
Alignment:
Q  216 gctctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  138302 gctctgtaagtgaaaagaggttcgtaataaaataaaaatg 138263  T

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Target: scaffold0902 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0902
Description:

Target: scaffold0902; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 255
Target Start/End: Original strand, 4406 - 4451
Alignment:
Q  210 ggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    |||||||||||| ||||||| ||||| |||| ||||||||||||||    
T  4406 ggctcggctctgcaagtgaatagaggcccgtaataaaataaaaatg 4451  T

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Target: scaffold0097 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 39106 - 39045
Alignment:
Q  192 cgttcctacaaatccgagggctcggctctgtaagtgaaaagaggtccgtcataaaataaaaa 253  Q
    ||||||||| |||| |  ||||||  ||||||||| ||||||||||||| ||||||||||||    
T  39106 cgttcctacgaatctggaggctcgattctgtaagtaaaaagaggtccgtaataaaataaaaa 39045  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 206436 - 206477
Alignment:
Q  214 cggctctgtaagtgaaaagaggtccgtcataaaataaaaatg 255  Q
    |||||||||||||||||||||||  || ||||||||||||||    
T  206436 cggctctgtaagtgaaaagaggtttgtaataaaataaaaatg 206477  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 236351 - 236388
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataa 68  Q
    ||||||||| ||||||||||||||||||| ||||||||    
T  236351 gtggggtgtccggggttcgaaccccgacccctgcataa 236388  T

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Target: scaffold0519 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 2956 - 2996
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcataaatt 71  Q
    ||||||||| |||||||||||||||| || |||||||||||    
T  2956 gtggggtgtccggggttcgaaccccggcccctgcataaatt 2996  T

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Target: scaffold0013 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 245478 - 245514
Alignment:
Q  31 gtggggtgttcggggttcgaaccccgacctctgcata 67  Q
    |||||||||||||| |||||||||||||| |||||||    
T  245478 gtggggtgttcgggtttcgaaccccgacccctgcata 245514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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