View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1946_high_113 (Length: 251)

Name: NF1946_high_113
Description: NF1946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1946_high_113
NF1946_high_113
[»] chr1 (59 HSPs)
chr1 (63-238)||(44291682-44291857)
chr1 (66-219)||(29021254-29021408)
chr1 (66-205)||(44802575-44802714)
chr1 (66-212)||(9833549-9833695)
chr1 (63-212)||(45048533-45048681)
chr1 (66-207)||(44291304-44291447)
chr1 (73-219)||(23526668-23526814)
chr1 (66-219)||(50926631-50926784)
chr1 (63-219)||(39485065-39485220)
chr1 (63-219)||(8230031-8230187)
chr1 (66-219)||(29020883-29021036)
chr1 (66-219)||(1837508-1837661)
chr1 (65-212)||(45048157-45048303)
chr1 (66-219)||(50926233-50926388)
chr1 (65-219)||(17641754-17641913)
chr1 (67-188)||(25274760-25274880)
chr1 (66-219)||(34555770-34555925)
chr1 (66-207)||(2868110-2868251)
chr1 (66-219)||(17088149-17088306)
chr1 (66-219)||(48173751-48173905)
chr1 (66-219)||(17088530-17088682)
chr1 (89-197)||(23526942-23527050)
chr1 (66-153)||(50304442-50304529)
chr1 (90-219)||(9992182-9992311)
chr1 (66-219)||(44954616-44954769)
chr1 (66-213)||(30786774-30786922)
chr1 (66-190)||(36229399-36229523)
chr1 (66-177)||(2867914-2868024)
chr1 (89-219)||(52335900-52336030)
chr1 (89-175)||(16298708-16298793)
chr1 (85-202)||(48174122-48174246)
chr1 (63-219)||(21938563-21938719)
chr1 (63-219)||(37421160-37421318)
chr1 (1-48)||(44291880-44291927)
chr1 (66-219)||(9992545-9992698)
chr1 (66-213)||(10278551-10278699)
chr1 (68-219)||(4080026-4080177)
chr1 (89-219)||(23340209-23340339)
chr1 (63-219)||(50305172-50305331)
chr1 (89-219)||(44954252-44954382)
chr1 (89-175)||(443986-444071)
chr1 (66-152)||(29438933-29439019)
chr1 (66-189)||(36228796-36228921)
chr1 (66-175)||(44582060-44582168)
chr1 (66-171)||(50419698-50419803)
chr1 (90-219)||(10278940-10279066)
chr1 (88-219)||(37505458-37505588)
chr1 (63-163)||(50419390-50419490)
chr1 (66-213)||(34555382-34555531)
chr1 (66-219)||(37505070-37505224)
chr1 (89-213)||(16299078-16299201)
chr1 (89-219)||(44582447-44582579)
chr1 (63-166)||(37421388-37421491)
chr1 (64-163)||(29439369-29439467)
chr1 (66-219)||(29307330-29307484)
chr1 (66-219)||(8229640-8229796)
chr1 (100-163)||(30787245-30787307)
chr1 (135-219)||(1744398-1744483)
chr1 (66-114)||(52268293-52268341)
[»] chr3 (70 HSPs)
chr3 (66-219)||(36701486-36701639)
chr3 (66-219)||(52236819-52236972)
chr3 (66-219)||(52375721-52375874)
chr3 (63-219)||(40838652-40838808)
chr3 (66-213)||(27200088-27200234)
chr3 (66-213)||(49407799-49407945)
chr3 (63-219)||(44676862-44677018)
chr3 (66-219)||(40275484-40275636)
chr3 (66-219)||(49951936-49952089)
chr3 (66-219)||(51827960-51828113)
chr3 (63-219)||(40839042-40839198)
chr3 (66-219)||(55192121-55192273)
chr3 (76-219)||(8873703-8873846)
chr3 (63-202)||(27199702-27199841)
chr3 (73-219)||(43222779-43222926)
chr3 (66-213)||(46013425-46013572)
chr3 (89-219)||(43222416-43222546)
chr3 (89-219)||(50662802-50662932)
chr3 (66-219)||(330226-330379)
chr3 (63-204)||(2323379-2323519)
chr3 (66-219)||(50900918-50901070)
chr3 (89-213)||(34104664-34104787)
chr3 (66-201)||(49720769-49720904)
chr3 (66-202)||(36701109-36701247)
chr3 (66-219)||(49408173-49408324)
chr3 (63-212)||(49951546-49951695)
chr3 (66-219)||(52237207-52237360)
chr3 (66-219)||(52375330-52375483)
chr3 (66-219)||(55389987-55390140)
chr3 (67-219)||(55389609-55389761)
chr3 (70-208)||(12140944-12141082)
chr3 (66-219)||(47431699-47431853)
chr3 (66-219)||(37076064-37076217)
chr3 (66-219)||(43678298-43678451)
chr3 (63-219)||(32730389-32730545)
chr3 (66-212)||(2044274-2044420)
chr3 (66-219)||(25534893-25535047)
chr3 (89-219)||(50900558-50900688)
chr3 (63-219)||(8874076-8874232)
chr3 (89-219)||(32730779-32730909)
chr3 (66-153)||(33412610-33412697)
chr3 (66-219)||(41998232-41998386)
chr3 (89-175)||(14654225-14654310)
chr3 (66-219)||(38535312-38535465)
chr3 (66-219)||(44676475-44676628)
chr3 (63-219)||(51473245-51473402)
chr3 (65-212)||(22370598-22370746)
chr3 (66-219)||(40275096-40275251)
chr3 (66-202)||(41998636-41998771)
chr3 (63-175)||(16689358-16689469)
chr3 (66-213)||(37075689-37075838)
chr3 (66-219)||(51828347-51828501)
chr3 (66-219)||(51828542-51828696)
chr3 (89-175)||(329872-329957)
chr3 (66-219)||(49720374-49720527)
chr3 (66-187)||(12141113-12141234)
chr3 (84-201)||(37847228-37847344)
chr3 (66-219)||(14654581-14654732)
chr3 (89-212)||(38535692-38535815)
chr3 (89-202)||(16701196-16701312)
chr3 (66-219)||(43678674-43678827)
chr3 (66-219)||(51828930-51829083)
chr3 (66-163)||(2051298-2051394)
chr3 (73-219)||(34105038-34105186)
chr3 (89-219)||(46013812-46013943)
chr3 (66-219)||(30513725-30513878)
chr3 (89-143)||(39010487-39010541)
chr3 (74-219)||(51472866-51473011)
chr3 (66-197)||(39010078-39010209)
chr3 (66-219)||(4275752-4275906)
[»] chr5 (37 HSPs)
chr5 (63-197)||(20266327-20266461)
chr5 (66-219)||(10721789-10721941)
chr5 (66-219)||(27307064-27307216)
chr5 (65-219)||(4966818-4966971)
chr5 (66-219)||(22651348-22651501)
chr5 (66-219)||(41834449-41834602)
chr5 (66-213)||(16752585-16752731)
chr5 (76-219)||(32305831-32305973)
chr5 (66-197)||(28595183-28595313)
chr5 (82-212)||(13557011-13557140)
chr5 (66-219)||(28290034-28290187)
chr5 (66-202)||(28494847-28494982)
chr5 (67-222)||(38900648-38900803)
chr5 (66-219)||(28289687-28289840)
chr5 (66-213)||(32697619-32697769)
chr5 (66-213)||(8419017-8419163)
chr5 (66-219)||(15029699-15029852)
chr5 (66-219)||(21371086-21371239)
chr5 (66-160)||(22651760-22651854)
chr5 (66-163)||(4967218-4967314)
chr5 (66-213)||(28495237-28495374)
chr5 (89-219)||(39083384-39083516)
chr5 (66-219)||(19291359-19291513)
chr5 (89-175)||(18149759-18149844)
chr5 (66-219)||(15115485-15115635)
chr5 (82-213)||(18150119-18150251)
chr5 (66-219)||(16752959-16753113)
chr5 (87-191)||(17260350-17260454)
chr5 (97-197)||(14464929-14465029)
chr5 (74-201)||(27307466-27307595)
chr5 (63-153)||(21370686-21370776)
chr5 (66-163)||(17260666-17260763)
chr5 (89-153)||(14340866-14340930)
chr5 (89-175)||(5162003-5162089)
chr5 (89-143)||(14340424-14340478)
chr5 (63-163)||(25973838-25973938)
chr5 (122-174)||(38901076-38901127)
[»] chr2 (50 HSPs)
chr2 (66-219)||(28143420-28143572)
chr2 (66-219)||(31797168-31797320)
chr2 (66-219)||(42192632-42192786)
chr2 (66-219)||(4355758-4355911)
chr2 (66-219)||(14942234-14942389)
chr2 (74-219)||(11540028-11540173)
chr2 (66-219)||(42192243-42192396)
chr2 (66-202)||(44220050-44220188)
chr2 (63-171)||(20495193-20495301)
chr2 (66-219)||(38007953-38008107)
chr2 (66-219)||(33920615-33920768)
chr2 (101-219)||(13399460-13399578)
chr2 (66-219)||(43160012-43160166)
chr2 (63-219)||(15550673-15550830)
chr2 (66-219)||(20128127-20128280)
chr2 (66-213)||(649530-649677)
chr2 (65-177)||(5037130-5037241)
chr2 (66-174)||(5560054-5560161)
chr2 (66-213)||(38008347-38008494)
chr2 (66-213)||(43216105-43216252)
chr2 (66-219)||(4356146-4356299)
chr2 (66-219)||(13399810-13399962)
chr2 (64-219)||(9330184-9330340)
chr2 (63-163)||(63411-63510)
chr2 (66-219)||(11539640-11539794)
chr2 (66-219)||(33921001-33921155)
chr2 (73-202)||(2190482-2190612)
chr2 (66-219)||(4808882-4809035)
chr2 (67-219)||(16175739-16175892)
chr2 (66-219)||(16953324-16953477)
chr2 (66-213)||(32418162-32418307)
chr2 (63-201)||(13315493-13315634)
chr2 (89-219)||(43160400-43160531)
chr2 (89-219)||(62983-63113)
chr2 (103-177)||(5035903-5035977)
chr2 (89-219)||(16952961-16953093)
chr2 (89-219)||(17060932-17061064)
chr2 (66-175)||(4809314-4809422)
chr2 (66-213)||(20127739-20127887)
chr2 (89-219)||(6949477-6949608)
chr2 (66-153)||(6949900-6949987)
chr2 (66-177)||(25336032-25336143)
chr2 (136-219)||(5560940-5561023)
chr2 (63-212)||(15551071-15551221)
chr2 (66-219)||(44219647-44219800)
chr2 (66-143)||(649803-649880)
chr2 (73-219)||(239740-239887)
chr2 (66-153)||(24140130-24140217)
chr2 (66-219)||(18450833-18450987)
chr2 (66-219)||(28617002-28617156)
[»] chr6 (28 HSPs)
chr6 (63-192)||(35163184-35163312)
chr6 (66-213)||(31574121-31574268)
chr6 (66-219)||(31073532-31073685)
chr6 (66-209)||(33096007-33096154)
chr6 (66-219)||(35163576-35163730)
chr6 (66-208)||(33095717-33095859)
chr6 (63-219)||(25468849-25469007)
chr6 (66-202)||(32836404-32836539)
chr6 (89-219)||(5114494-5114624)
chr6 (66-207)||(835397-835537)
chr6 (66-219)||(5120859-5121012)
chr6 (89-219)||(25472402-25472533)
chr6 (63-219)||(32836007-32836157)
chr6 (89-219)||(24640575-24640705)
chr6 (123-213)||(29891476-29891566)
chr6 (66-213)||(30251087-30251235)
chr6 (66-138)||(22534068-22534139)
chr6 (106-219)||(11523727-11523841)
chr6 (66-136)||(18297662-18297732)
chr6 (66-139)||(835695-835768)
chr6 (66-114)||(22534219-22534267)
chr6 (66-197)||(28636295-28636425)
chr6 (136-219)||(28636586-28636669)
chr6 (63-162)||(31242806-31242905)
chr6 (66-219)||(31470318-31470472)
chr6 (63-139)||(3835195-3835271)
chr6 (66-114)||(29033437-29033485)
chr6 (66-142)||(31073146-31073222)
[»] chr4 (57 HSPs)
chr4 (63-202)||(40160498-40160636)
chr4 (63-207)||(229161-229305)
chr4 (66-175)||(23986523-23986632)
chr4 (66-202)||(51309912-51310048)
chr4 (66-217)||(24336155-24336306)
chr4 (81-219)||(17503992-17504129)
chr4 (89-219)||(24335787-24335917)
chr4 (63-210)||(229558-229705)
chr4 (64-219)||(14439829-14439984)
chr4 (66-219)||(12593027-12593180)
chr4 (66-219)||(12593413-12593566)
chr4 (81-219)||(35193326-35193463)
chr4 (66-219)||(46737045-46737198)
chr4 (66-219)||(35193694-35193845)
chr4 (66-219)||(28465084-28465237)
chr4 (66-219)||(28465471-28465624)
chr4 (89-195)||(40160120-40160225)
chr4 (66-219)||(54440574-54440725)
chr4 (89-219)||(17504349-17504479)
chr4 (66-219)||(55677347-55677501)
chr4 (66-219)||(21034626-21034780)
chr4 (66-202)||(54440976-54441112)
chr4 (66-213)||(34789385-34789532)
chr4 (89-219)||(14440218-14440348)
chr4 (89-219)||(56077714-56077844)
chr4 (73-175)||(45838557-45838658)
chr4 (66-218)||(33689832-33689983)
chr4 (100-219)||(18965526-18965645)
chr4 (88-219)||(46736680-46736811)
chr4 (66-219)||(19528872-19529026)
chr4 (66-219)||(21034238-21034392)
chr4 (66-219)||(26974286-26974440)
chr4 (63-213)||(28166004-28166154)
chr4 (66-219)||(34789772-34789926)
chr4 (66-219)||(34807119-34807273)
chr4 (63-219)||(45838937-45839095)
chr4 (74-213)||(24851861-24852001)
chr4 (63-172)||(33777632-33777740)
chr4 (66-163)||(51309670-51309767)
chr4 (73-149)||(30597979-30598055)
chr4 (63-171)||(31297127-31297235)
chr4 (64-213)||(16214891-16215040)
chr4 (66-136)||(44219378-44219448)
chr4 (66-151)||(10795769-10795854)
chr4 (100-219)||(18965177-18965296)
chr4 (89-153)||(24851342-24851406)
chr4 (63-143)||(41608374-41608454)
chr4 (63-219)||(6616672-6616829)
chr4 (89-175)||(6617097-6617182)
chr4 (89-163)||(35643581-35643654)
chr4 (66-114)||(20958353-20958401)
chr4 (63-143)||(36168329-36168409)
chr4 (66-219)||(25938059-25938213)
chr4 (118-163)||(19529141-19529185)
chr4 (101-177)||(26974677-26974753)
chr4 (88-219)||(34807529-34807660)
chr4 (66-142)||(41608882-41608958)
[»] chr7 (51 HSPs)
chr7 (66-219)||(34595162-34595315)
chr7 (64-219)||(26026318-26026474)
chr7 (66-219)||(9393739-9393891)
chr7 (65-219)||(25637588-25637742)
chr7 (66-201)||(49064037-49064171)
chr7 (66-212)||(33880623-33880769)
chr7 (66-195)||(35579300-35579428)
chr7 (66-201)||(5333883-5334018)
chr7 (66-213)||(35578902-35579048)
chr7 (66-219)||(9181535-9181688)
chr7 (76-219)||(28687889-28688032)
chr7 (65-219)||(33880975-33881133)
chr7 (89-219)||(4477728-4477858)
chr7 (66-212)||(7732884-7733030)
chr7 (63-153)||(787242-787332)
chr7 (66-219)||(39136689-39136841)
chr7 (89-212)||(27245601-27245724)
chr7 (66-162)||(39136980-39137076)
chr7 (65-219)||(5745641-5745795)
chr7 (66-177)||(16917716-16917826)
chr7 (66-213)||(34594586-34594732)
chr7 (66-219)||(2758088-2758241)
chr7 (66-219)||(7732491-7732644)
chr7 (66-219)||(16081302-16081455)
chr7 (66-175)||(5334254-5334362)
chr7 (66-219)||(48247981-48248135)
chr7 (66-175)||(45815347-45815454)
chr7 (91-213)||(14311683-14311805)
chr7 (66-207)||(39388669-39388811)
chr7 (66-219)||(15712368-15712521)
chr7 (66-219)||(16081689-16081842)
chr7 (73-213)||(35161197-35161338)
chr7 (66-219)||(9394121-9394272)
chr7 (66-213)||(27245206-27245354)
chr7 (66-219)||(25637200-25637354)
chr7 (89-156)||(49064173-49064240)
chr7 (119-202)||(45815473-45815556)
chr7 (66-219)||(9181799-9181955)
chr7 (66-219)||(48247590-48247747)
chr7 (66-219)||(2658842-2658996)
chr7 (73-171)||(18535321-18535418)
chr7 (66-219)||(5746029-5746183)
chr7 (66-219)||(24929693-24929851)
chr7 (63-219)||(26026708-26026864)
chr7 (89-219)||(786808-786939)
chr7 (89-219)||(28687619-28687749)
chr7 (89-163)||(11971360-11971433)
chr7 (64-219)||(11973792-11973947)
chr7 (119-219)||(14311371-14311472)
chr7 (90-219)||(26048337-26048465)
chr7 (89-153)||(26047983-26048047)
[»] scaffold0007 (6 HSPs)
scaffold0007 (66-219)||(205758-205910)
scaffold0007 (63-162)||(204928-205027)
scaffold0007 (145-219)||(205032-205106)
scaffold0007 (66-163)||(210783-210880)
scaffold0007 (63-162)||(205358-205457)
scaffold0007 (145-219)||(205462-205535)
[»] scaffold0021 (2 HSPs)
scaffold0021 (66-208)||(159282-159424)
scaffold0021 (82-208)||(159038-159165)
[»] chr8 (33 HSPs)
chr8 (66-219)||(7911006-7911159)
chr8 (63-202)||(28877297-28877435)
chr8 (64-212)||(18049988-18050136)
chr8 (66-219)||(599535-599688)
chr8 (66-219)||(28254816-28254969)
chr8 (89-219)||(41260651-41260781)
chr8 (66-219)||(9796729-9796882)
chr8 (66-175)||(15255856-15255964)
chr8 (66-219)||(35427202-35427355)
chr8 (66-219)||(599888-600041)
chr8 (66-219)||(5730820-5730973)
chr8 (63-219)||(18428151-18428308)
chr8 (68-219)||(18049595-18049747)
chr8 (66-213)||(28254428-28254576)
chr8 (64-219)||(18805165-18805318)
chr8 (63-162)||(28876903-28877002)
chr8 (66-219)||(16578486-16578639)
chr8 (66-219)||(42035775-42035928)
chr8 (66-213)||(15256224-15256374)
chr8 (66-175)||(41260274-41260382)
chr8 (89-212)||(2208740-2208864)
chr8 (74-219)||(6115500-6115646)
chr8 (89-202)||(16578134-16578247)
chr8 (101-213)||(26252847-26252959)
chr8 (66-166)||(7910619-7910718)
chr8 (90-162)||(10047083-10047155)
chr8 (64-171)||(2617746-2617853)
chr8 (66-175)||(34799518-34799626)
chr8 (89-175)||(42036206-42036292)
chr8 (66-219)||(9797116-9797270)
chr8 (66-189)||(9930076-9930199)
chr8 (121-172)||(18674206-18674256)
chr8 (63-114)||(35426842-35426893)
[»] scaffold0108 (2 HSPs)
scaffold0108 (84-202)||(15506-15623)
scaffold0108 (74-212)||(15124-15261)
[»] scaffold0097 (2 HSPs)
scaffold0097 (66-177)||(46269-46380)
scaffold0097 (66-163)||(46715-46811)
[»] scaffold1432 (1 HSPs)
scaffold1432 (66-171)||(504-608)
[»] scaffold0712 (2 HSPs)
scaffold0712 (66-219)||(6395-6548)
scaffold0712 (63-219)||(6781-6942)
[»] scaffold0709 (2 HSPs)
scaffold0709 (66-219)||(6413-6566)
scaffold0709 (63-219)||(6799-6960)
[»] scaffold0173 (1 HSPs)
scaffold0173 (63-114)||(6575-6626)


Alignment Details
Target: chr1 (Bit Score: 128; Significance: 3e-66; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 63 - 238
Target Start/End: Complemental strand, 44291857 - 44291682
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    |||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||  |||||||||||||||    
T  44291857 ggtttaattgcatttttagtccttgtattttgaccagctcatgaaaatggtcatgtctcttttaaatcgaataaaatcgtcacctaactatcatgttttt 44291758  T
Q  163 tgcaattttagtcatgccccctattttcaactccagaaacacacagaaatggcagttagttttagtcgtatcacct 238  Q
    |||| |||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  44291757 tgcagttttagtcctaccccctattttcaactccagaaacacatagaaatggcagttagttttagtcgtaccacct 44291682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 29021408 - 29021254
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatca-tgttttttg 164  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||| ||||| |||||| |||| ||||||||||||| ||||| |||||  ||||||||    
T  29021408 ttaattgcacttttggtcctcacattttgaccagctcacgaaaatgttcatgcctctttcaaatcgaacaaaatcgtccctaaattatcacggttttttg 29021309  T
Q  165 caattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| | |||||||||||||||||||||||| |||| ||||| |||||    
T  29021308 cagttttagtcttaccccctattttcaactccagaaacgcacataaatgacagtt 29021254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 44802714 - 44802575
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | |||||||||||||||||||| |||||||| |||||| |||  ||||||||||||| |||||||||||||||||||||    
T  44802714 ttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactatcatgttttttgc 44802615  T
Q  166 aattttagtcatgccccctattttcaactccagaaacaca 205  Q
    | |||||||  | || ||||||||||||||||||||||||    
T  44802614 agttttagttctacctcctattttcaactccagaaacaca 44802575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 9833695 - 9833549
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    ||||||| ||||||  |||| ||| |||||||| ||||||||||| |||||| |||||| |||| ||||||||||||| ||||| ||| |||||||||||    
T  9833695 ttaattgtacttttgatccttgtactttgaccaactcacgaaaatagtcatgcctctttcaaatcgaacaaaatcgtccctaaaatattatgttttttgc 9833596  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaat 212  Q
    | |||||||| | |||||||||||||||||||||||| |||||||||    
T  9833595 agttttagtcctaccccctattttcaactccagaaacgcacagaaat 9833549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 63 - 212
Target Start/End: Complemental strand, 45048681 - 45048533
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| ||||||| ||||||| ||||||||||| ||||||||||||||||  ||||||  ||| |||||||| |||| ||||||||||||||||||    
T  45048681 ggtttaattacacttttggtcctcgcattttgaccagttcacgaaaatggtcatacctctttccaatcgaacaaaaccgtc-ctaaactatcatgttttt 45048583  T
Q  163 tgcaattttagtcatgccccctattttcaactccagaaacacacagaaat 212  Q
    |||| |||||||| | || ||||||||||||||||||||| || ||||||    
T  45048582 tgcagttttagtcctacctcctattttcaactccagaaacgcagagaaat 45048533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 44291304 - 44291447
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg--tttttt 163  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||  ||||||||||||  ||||||    
T  44291304 ttaattgcacttttggtcctcacattttgaccagctcacgaaaatggttatgcctctttcaaattgaacaaaatcgtccataaactatcatgtttttttt 44291403  T
Q  164 gcaattttagtcatgccccctattttcaactccagaaacacaca 207  Q
    ||| |||||||||| || ||| ||||||| ||||||||| ||||    
T  44291404 gcagttttagtcatacctcctgttttcaaatccagaaacgcaca 44291447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 23526668 - 23526814
Alignment:
Q  73 cacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaatttta 172  Q
    ||||||| ||||||  |||||||||||||||||||||||||| || ||||||||||| |||||||||| || ||| |||||||| ||||||||| |||||    
T  23526668 cacttttggtcctcacattttgaccagctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcatccctagactatcat-ttttttgcagtttta 23526766  T
Q  173 gt-catgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || | ||||||||||||||||||||| |||| |||||||||| |||||    
T  23526767 gtccctgccccctattttcaactccaaaaacgcacagaaatgacagtt 23526814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 50926784 - 50926631
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||| ||| ||||||||||||||||||||||||||  |||||||| |||| |||||||| |||| |||||||||||| ||||||||    
T  50926784 ttaattacacttttggtcatcgcattttgaccagctcacgaaaatggtcccgtctctttcaaatcgaacaaaaccgtccctaaactatcat-ttttttgc 50926686  T
Q  166 aattttagt-catgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||||||| | | ||||||||||||||||||| ||||||||| |||||| ||||    
T  50926685 agttttagtccttaccccctattttcaactccataaacacacataaatggtagtt 50926631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 63 - 219
Target Start/End: Original strand, 39485065 - 39485220
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| ||||||| ||||||| |||||||| ||||||||||||||||| |  |||||| |||| ||||||||||||| ||||||||| ||||||||    
T  39485065 ggtttaattacacttttggtcctcgcattttgactagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactat-atgttttt 39485163  T
Q  163 tgcaattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||| |||||||| |  | ||||||||||||| |||||||||| ||| ||| |||||    
T  39485164 tgcagttttagtcctatctcctattttcaacttcagaaacacagagagatgacagtt 39485220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 63 - 219
Target Start/End: Complemental strand, 8230187 - 8230031
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| || |||| || |||| |||||||||   ||||||||||||| ||  ||||||||||| ||||||||||||| ||||||||| ||||||||    
T  8230187 ggtttaattacatttttggttctcgcattttgacctattcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttt 8230089  T
Q  163 tgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||| ||||||||||  |||||||||| ||||||||||||| |||||||||| |||||    
T  8230088 tgcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagtt 8230031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 29020883 - 29021036
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||||||| | | ||| ||||||||||| |||||||  |||||||||||||||||||||||| |||||||||| ||  |||| |||||||||||||||    
T  29020883 ttaattgcacatatggtcttcgtattttgatcagctcataaaaatggtcatgtctcttttaaatcgaacaaaatcatccttaaattatcatgttttttgc 29020982  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||||||||  | | ||||||||||| ||||| |||| |||| ||||| |||||    
T  29020983 aattttagtgttactccctattttcacctccaaaaacgcacataaatgtcagtt 29021036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 1837508 - 1837661
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | ||||||| || ||||||||| || |||| |||||||||||| ||||||||| ||| ||||||||| |||||||||||    
T  1837508 ttaattacacttttggtccttgcattttgatcaactcacgaaattgatcatatctcttttaaatcgaacaaaattgtccctaaactat-atgttttttgc 1837606  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||||||||||  | |||||||||||||||||||||| |||| ||||| |||||    
T  1837607 agttttagtcatatctccctattttcaactccagaaacgcacataaatgacagtt 1837661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 45048157 - 45048303
Alignment:
Q  65 tttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttg 164  Q
    ||||||| ||||||| ||||| | |||||||||| || |||||||||||  |  |||||||||||||||||||||||||  |||||||| ||||||||||    
T  45048157 tttaattacacttttggtccttgcattttgaccaacttacgaaaatggttctacctcttttaaattgaacaaaatcgtccataaactat-atgttttttg 45048255  T
Q  165 caattttagtcatgccccctattttcaactccagaaacacacagaaat 212  Q
    || |||||||| | || | ||||||||||||||||||| || ||||||    
T  45048256 cagttttagtcctacctcatattttcaactccagaaacgcatagaaat 45048303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 50926233 - 50926388
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatca-tgttttttg 164  Q
    |||||| || |||| ||||||  ||||||||||||||||||||||  ||||  |||||| |||| ||||||||||||| ||||||||||| | |||||||    
T  50926233 ttaattacagttttggtcctcccattttgaccagctcacgaaaataatcatacctctttcaaatcgaacaaaatcgtccctaaactatcatttttttttg 50926332  T
Q  165 caattttagt-catgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || ||||||| | | || |||||||||||||||||||||||||| |||||| ||||    
T  50926333 cagttttagtccttacctcctattttcaactccagaaacacacataaatggtagtt 50926388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 65 - 219
Target Start/End: Complemental strand, 17641913 - 17641754
Alignment:
Q  65 tttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaacta----tcatgttt 160  Q
    ||||||| ||||||| ||||||| |||||||||| |||||||||||||||||  ||||||||||| ||||||||||||| ||||||||    |  | |||    
T  17641913 tttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatttttatttttt 17641814  T
Q  161 tttgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||||| |||||||| |  | |||||||| ||||||||||||| |||||||||| |||||    
T  17641813 tttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtt 17641754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 25274760 - 25274880
Alignment:
Q  67 taattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgca 166  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||| |||| |||||||| |||  |||||||| |||||||||||||    
T  25274760 taattgcacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcctaaacta-catgttttttgca 25274858  T
Q  167 attttagtcatgccccctattt 188  Q
     |||| ||| |  |||||||||    
T  25274859 tttttggtccttacccctattt 25274880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 34555925 - 34555770
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg--tttttt 163  Q
    |||||| |||||||||||||   |||||||||| ||||||||||||||| | ||| |||||||| |||||||||||||  |||||||| |||  ||||||    
T  34555925 ttaattacacttttagtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttt 34555827  T
Q  164 gcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||| ||||||||||  | |||||||| ||||||||||||| |||||||||| |||||    
T  34555826 gcagttttagtcatatctccctatttccaactccagaaacgcacagaaatgacagtt 34555770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 207
Target Start/End: Complemental strand, 2868251 - 2868110
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| |||||||  |||||  |||||||||| | ||||||||||||| |  ||||||||||| ||||||||||||| ||| ||||| |||||||||||    
T  2868251 ttaattacacttttgatcctcacattttgaccaacacacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctacactat-atgttttttgc 2868153  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacaca 207  Q
    | ||||||||||  |||||||||| ||||||||||||| ||||    
T  2868152 agttttagtcatatccccctatttccaactccagaaacgcaca 2868110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 17088149 - 17088306
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-----ttt 160  Q
    |||||| |||| || ||| ||| |||||||||||||||||||||||||  || |||||| |||| |||||||| |||| |||||||||||||     |||    
T  17088149 ttaattacactgttggtcatcgcattttgaccagctcacgaaaatggttttgcctctttcaaatcgaacaaaaccgtc-ctaaactatcatgtttttttt 17088247  T
Q  161 tttgcaattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||||||||||||||| | || ||||||||||||| ||||||  || |||||||||||||    
T  17088248 tttgcaattttagtcctacctcctattttcaacttcagaaatgcagagaaatggcagtt 17088306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 48173751 - 48173905
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    ||||||| || ||| |||| || ||||||||||| |||| ||||||||  || |||||| |||| ||||||||||| | ||||| ||||||| |||||||    
T  48173751 ttaattgtacctttggtccacgcattttgaccagttcacaaaaatggttctgcctctttcaaatcgaacaaaatcgaccctaaattatcatgtttttttg 48173850  T
Q  165 caattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||||| ||||||||||||||||||| |||| | || ||||| |||||    
T  48173851 cacttttagtcataccccctattttcaactccaaaaactctcataaatgacagtt 48173905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 17088682 - 17088530
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||  ||||||| ||||||||||||||||||||| |||||| ||||  ||||||| |||| ||||||||| || ||||||||    
T  17088682 ttaattacacttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatcaaacaaaaccgtccctaaactat-atattttttgc 17088584  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||  | || ||||||||||| || |||||| || ||||||| |||||    
T  17088583 agttttagttctacctcctattttcaaatctagaaacgcagagaaatgacagtt 17088530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 23527050 - 23526942
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagt-catgccccctatt 187  Q
    ||||||| ||||||| ||||||||||||| || |||||||| |||||||| |||| |||||||||||| ||||||||| ||||||| | |||||||||||    
T  23527050 attttgatcagctcatgaaaatggtcatgccttttttaaatcgaacaaaaccgtctctaaactatcat-ttttttgcagttttagtccgtgccccctatt 23526952  T
Q  188 ttcaactcca 197  Q
    ||||||||||    
T  23526951 ttcaactcca 23526942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 153
Target Start/End: Original strand, 50304442 - 50304529
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactat 153  Q
    |||||| ||||||| ||||||| |||||||||| |||||||||||||||||  ||||||||||| ||||||||||||| |||||||||    
T  50304442 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctctaaactat 50304529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 219
Target Start/End: Original strand, 9992182 - 9992311
Alignment:
Q  90 ttttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcatgcc-ccctattt 188  Q
    ||||||||| |||||| |||||||| | ||| |||||||| ||||||||| |||  |||||||| |||||||||||| |||||||| |  | ||||||||    
T  9992182 ttttgaccaactcacggaaatggtcctatcttttttaaatcgaacaaaatggtccttaaactat-atgttttttgcagttttagtcctatctccctattt 9992280  T
Q  189 tcaactccagaaacacacagaaatggcagtt 219  Q
     |||||||||||||||||||||||| |||||    
T  9992281 ccaactccagaaacacacagaaatgacagtt 9992311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 44954769 - 44954616
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||| |||||||||| |||| ||||||| ||||  || ||||||||  ||||||||| ||  |||||||| |||||||||||    
T  44954769 ttaattacacttttggtcctcgcattttgaccaactcatgaaaatgatcataccttttttaaatcaaacaaaatcatccataaactat-atgttttttgc 44954671  T
Q  166 aattttagtcatgcc-ccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |||||||| ||||||||||||| |||||||||| |||||    
T  44954670 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtt 44954616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 30786774 - 30786922
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaat-ggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttg 164  Q
    |||||| ||||||| || || | |||||||||| ||||||||||| |||| |  ||||||||||| ||||||||||||| ||||||||| ||||||||||    
T  30786774 ttaattacacttttggttcttgcattttgaccaactcacgaaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttg 30786872  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatg 213  Q
    || |||||||| |  | |||||||| |||||||| |||| ||||||||||    
T  30786873 cagttttagtcctatctccctatttccaactccataaacgcacagaaatg 30786922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 36229523 - 36229399
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    ||||||| | |||| ||||||| |||||  | |||| |||||||||||| ||||||| |||||||||||||| |  ||  ||||||||||||||||||||    
T  36229523 ttaattgtatttttggtcctcgcattttaccaagcttacgaaaatggtcttgtctctattaaattgaacaaactgatccttaaactatcatgttttttgc 36229424  T
Q  166 aattttagtcatgccccctattttc 190  Q
    | |||||||||| || |||||||||    
T  36229423 agttttagtcatacctcctattttc 36229399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 177
Target Start/End: Original strand, 2867914 - 2868024
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| || |||| ||| ||| |||||||||| |||||||||||| |||| |||||||||||| ||||||||| |||  |||||||| |||||||||||    
T  2867914 ttaattacaattttggtcatcgcattttgaccaactcacgaaaatgatcatatctcttttaaatcgaacaaaattgtcgttaaactat-atgttttttgc 2868012  T
Q  166 aattttagtcat 177  Q
    | ||||||||||    
T  2868013 agttttagtcat 2868024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 52336030 - 52335900
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctatt 187  Q
    |||||||||| |||| |||| ||||| |  ||||||||||| ||||||||||||| ||||||||| || ||||||||| ||||||||||  | |||||||    
T  52336030 attttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-attttttttgcagttttagtcatatctccctatt 52335932  T
Q  188 ttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||||||||||||| |||| ||||| |||||    
T  52335931 tccaactccagaaacgcacataaatgacagtt 52335900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 16298708 - 16298793
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtc 175  Q
    |||||||||| ||||||||| |||||||  ||||||||||| ||||||||||||| ||||||||| |||||||||||| ||||||||    
T  16298708 attttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagtc 16298793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 48174246 - 48174122
Alignment:
Q  85 tcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt-------tgcaattttagtcat 177  Q
    ||||||||||| ||||||||||||| |||  ||||||||||||||  ||||||| |||| ||||||||||||||||||       |||| ||||||||      
T  48174246 tcgtattttgatcagctcacgaaaacggttctgtctcttttaaatcaaacaaaaccgtccctaaactatcatgtttttttttttgtgcagttttagtccc 48174147  T
Q  178 gccccctattttcaactccagaaac 202  Q
     ||||||||||||||||||||||||    
T  48174146 accccctattttcaactccagaaac 48174122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 219
Target Start/End: Original strand, 21938563 - 21938719
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| ||||||| ||| |   ||||||| || |||||||||||| || | ||| |||||||| |||||||||||||  |||||||| ||||||||    
T  21938563 ggtttaattacacttttggtcttaccattttgatcaactcacgaaaatgatcttatcttttttaaatcgaacaaaatcgtccataaactat-atgttttt 21938661  T
Q  163 tgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||| |||||||| |  | |||||||| |||||||| |||| |||||||||| |||||    
T  21938662 tgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagtt 21938719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 219
Target Start/End: Original strand, 37421160 - 37421318
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg--ttt 160  Q
    ||||||||| ||||||| ||| | | ||||||||||  |||||||| ||||| |  ||||||||||| ||||||||||||| ||||||||| |||  |||    
T  37421160 ggtttaattacacttttggtctttgcattttgaccaattcacgaaattggtcttacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttt 37421258  T
Q  161 tttgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||||| ||||||||||    |||||||| |||||||| |||| |||||||||| |||||    
T  37421259 tttgcagttttagtcatatttccctatttccaactccaaaaacgcacagaaatgacagtt 37421318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 44291927 - 44291880
Alignment:
Q  1 aaaacggataagaaaattatgttaaataattgtatttgcctactccat 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44291927 aaaacggataagaaaattatgttaaataattgtatttgcctactccat 44291880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 9992698 - 9992545
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | |||||||| | |||| |||||||||| | ||| |||||||| ||||||||||||   |||||||| |||||||||||    
T  9992698 ttaattacacttttggtccttgcattttgacaaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtgcttaaactat-atgttttttgc 9992600  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | | |||||| |  | |||||||||||||||||||||| |  ||||||| |||||    
T  9992599 agtattagtcctatctccctattttcaactccagaaacgcgtagaaatgacagtt 9992545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 10278551 - 10278699
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| ||||| | |||||||||| ||||||||| || || |  ||||||||||| ||||||||||||| ||||||||| ||| |||||||    
T  10278551 ttaattacacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttg 10278649  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatg 213  Q
    || |||||||| |  | ||| |||| ||||||||||||| |||| |||||    
T  10278650 cagttttagtcctatctccccatttgcaactccagaaacgcacataaatg 10278699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 4080026 - 4080177
Alignment:
Q  68 aattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaa 167  Q
    |||| ||||||| ||||| | || ||||||| ||||||||| || || |  || |||||||| ||||||||||||| ||||||||| ||||||||| ||     
T  4080026 aattacacttttggtccttgcatcttgaccaactcacgaaattgatcgtacctattttaaatcgaacaaaatcgtccctaaactat-atgttttttacag 4080124  T
Q  168 ttttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||||||||||  | |||||||| |||||| |||||| |||| ||||| |||||    
T  4080125 ttttagtcatatctccctatttccaactctagaaacgcacaaaaatgacagtt 4080177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 23340209 - 23340339
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcg-tcactaaactatcatgttttttgcaattttagtcat-gccccctat 186  Q
    |||||||||| ||||||||| ||||| | |||||||||||| ||||||||||| ||| |||||||| || ||||||||| ||||||||||  | || |||    
T  23340209 attttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgctca-taaactat-atattttttgcagttttagtcatatctccttat 23340306  T
Q  187 tttcaactccagaaacacacagaaatggcagtt 219  Q
    || ||||||||||||| | |||||||| |||||    
T  23340307 ttccaactccagaaacgctcagaaatgacagtt 23340339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 219
Target Start/End: Complemental strand, 50305331 - 50305172
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaac--tatcatgttt 160  Q
    ||||||||| ||||||| || ||   ||||| |||| |||| |||||||||| | ||| |||||||| |||||||||||||  |||||  |||  | |||    
T  50305331 ggtttaattacacttttggttctaccattttaaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatatttttt 50305232  T
Q  161 tttgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||||| ||||||||||  | ||||||||||||||||| ||||||||| ||||| |||||    
T  50305231 tttgcagttttagtcatatctccctattttcaactccataaacacacataaatgacagtt 50305172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 44954252 - 44954382
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctatt 187  Q
    |||||||||| |||||||||||||||||  || ||||||||  ||||||||||||  |||| ||| |||||||||||| |||||||| |  | | || ||    
T  44954252 attttgaccaactcacgaaaatggtcataccttttttaaatccaacaaaatcgtctttaaattat-atgttttttgcagttttagtcgtatctctctgtt 44954350  T
Q  188 ttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||||||||||||| |||||||||| |||||    
T  44954351 tccaactccagaaacgcacagaaatgacagtt 44954382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 175
Target Start/End: Complemental strand, 444071 - 443986
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtc 175  Q
    |||||||||| ||||||||| | |||||  ||||||||||| ||||||||||||  ||||||||| |||||||||||| ||||||||    
T  444071 attttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgttcctaaactat-atgttttttgcagttttagtc 443986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 152
Target Start/End: Original strand, 29438933 - 29439019
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaacta 152  Q
    |||||| ||||||| ||||| | |||||||||| ||||||||| ||||| |  ||||||||||| ||||||||||||| ||||||||    
T  29438933 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 29439019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 36228796 - 36228921
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatca--tgtttttt 163  Q
    ||||||||||||||  |||||  ||||| | |||||||| ||||||||| |  ||||||||||||||||||||   || |||||||||||  | ||||||    
T  36228796 ttaattgcacttttgatcctcacattttaatcagctcacaaaaatggtcttacctcttttaaattgaacaaaacgatccctaaactatcatttttttttt 36228895  T
Q  164 gcaattttagtcatgccccctatttt 189  Q
    ||| |||||||||| |||| ||||||    
T  36228896 gcagttttagtcataccccatatttt 36228921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 175
Target Start/End: Original strand, 44582060 - 44582168
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   |||||||||| || |||||| ||||| |  ||||||||||| ||||||||||||| ||||| ||| |||||||||||    
T  44582060 ttaattacacttttggtccttacattttgaccaactaacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaattat-atgttttttgc 44582158  T
Q  166 aattttagtc 175  Q
    | ||||||||    
T  44582159 agttttagtc 44582168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 171
Target Start/End: Complemental strand, 50419803 - 50419698
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||||||||||| ||| ||| |||| ||||| ||||||||| ||||| || || ||| |||||||||||||  ||| ||  |||||||||||||||||    
T  50419803 ttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggtccctgtactatcatgttttttgc 50419704  T
Q  166 aatttt 171  Q
    | ||||    
T  50419703 actttt 50419698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 219
Target Start/End: Complemental strand, 10279066 - 10278940
Alignment:
Q  90 ttttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctattt 188  Q
    ||||||||| ||||||||||||||| | ||| |||||||| |||||||||||||  |||||||| |||||||   || |||||||| |  | || ||| |    
T  10279066 ttttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttt---cagttttagtcctatctccatatat 10278971  T
Q  189 tcaactccagaaacacacagaaatggcagtt 219  Q
     |||||||||||||||||||||||| |||||    
T  10278970 ccaactccagaaacacacagaaatgacagtt 10278940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 219
Target Start/End: Complemental strand, 37505588 - 37505458
Alignment:
Q  88 tattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctat 186  Q
    ||||||||||| ||||||||| || |||| |||||||||||   ||||||||||||  |||||||| ||| |||||||| |||||||| |  | ||||||    
T  37505588 tattttgaccaactcacgaaattgatcatatctcttttaaaacaaacaaaatcgtccataaactat-atg-tttttgcagttttagtcctatctccctat 37505491  T
Q  187 tttcaactccagaaacacacagaaatggcagtt 219  Q
    ||||||||||| |||| |||| ||||| |||||    
T  37505490 tttcaactccaaaaacgcacaaaaatgacagtt 37505458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 50419390 - 50419490
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||||||||||| ||||||| ||||  |||| ||||| ||||||||||||||| ||| |||| ||||||| | |||  |  ||||||||||||||    
T  50419390 ggtttaattgcacttttggtcctcgcatttaaaccaactcacaaaaatggtcatgtctttttcaaatcgaacaaagtagtccttgtactatcatgttttt 50419489  T
Q  163 t 163  Q
    |    
T  50419490 t 50419490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 34555382 - 34555531
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg--tttttt 163  Q
    |||||| ||||||| ||||| | |||||||| | ||| ||||| ||||  |  ||||||||||| ||||||||||||| ||||||||| |||  ||||||    
T  34555382 ttaattacacttttggtccttgcattttgactaactcgcgaaattggtgctacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttt 34555480  T
Q  164 gcaattttagtcat-gccccctattttcaactccagaaacacacagaaatg 213  Q
     || |||||||| |  | |||||||| ||||||||||||| ||||||||||    
T  34555481 acagttttagtcctatctccctatttccaactccagaaacgcacagaaatg 34555531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 37505070 - 37505224
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| |||||   |||||||||| ||||||||||||||  | ||| |||||||| |||||||||||||  |||||||| ||| |||||||    
T  37505070 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttg 37505168  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| |    ||||||||||||||||| |||   ||||||||| |||||    
T  37505169 cagttttagtcctatttccctattttcaactccaaaaatgaacagaaatgacagtt 37505224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 213
Target Start/End: Complemental strand, 16299201 - 16299078
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcatgccccc-tatt 187  Q
    ||||||| || ||| ||||||||||| | | | |||||| |||||||||||||||  |||||||| |||||||||||| |||||||| |  | || ||||    
T  16299201 attttgatcaactcgcgaaaatggtcctattttttttaa-ttgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccatatt 16299104  T
Q  188 ttcaactccagaaacacacagaaatg 213  Q
    | ||||||||||||| ||||||||||    
T  16299103 tccaactccagaaacgcacagaaatg 16299078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 44582579 - 44582447
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgcaattttagtcatg-ccccctat 186  Q
    ||||||| || ||||||||||||||||| ||  ||| |||| |||||||||||||  |||||||| ||| ||||||||| |||||||| || | ||||||    
T  44582579 attttgatcaactcacgaaaatggtcatatcattttcaaatcgaacaaaatcgtctttaaactat-atgtttttttgcagttttagtcttgtctccctat 44582481  T
Q  187 tttcaactcc-agaaacacacagaaatggcagtt 219  Q
    ||||| |||| | |||| |||||||||| |||||    
T  44582480 tttcagctccaaaaaacgcacagaaatgacagtt 44582447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 166
Target Start/End: Complemental strand, 37421491 - 37421388
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtc-tcttttaaattgaacaaaatcgtcactaaactatcatgtttt 161  Q
    ||||||||| ||||||||||| |   |||||||||| ||||||||||||||| | || | |||||||| |||||||||||||  |||||||| ||| |||    
T  37421491 ggtttaattacacttttagtcataccattttgaccaactcacgaaaatggtcctatctttttttaaatcgaacaaaatcgtccttaaactat-atgattt 37421393  T
Q  162 ttgca 166  Q
    |||||    
T  37421392 ttgca 37421388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 163
Target Start/End: Complemental strand, 29439467 - 29439369
Alignment:
Q  64 gtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt 163  Q
    |||||||||||||||| ||||    ||||||| || |||||||||||| || | ||| |||||||| |||||||||||||  |||||||| |||||||||    
T  29439467 gtttaattgcacttttggtcccaccattttgatcaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 29439369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 29307484 - 29307330
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||||||||||| |||||||| ||||||||  ||||||||| ||||| || |  ||| |||  ||||||||  |||  | || |||||| ||| ||||    
T  29307484 ttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29307385  T
Q  166 aattttagtcatgccccctattttc-aactccagaaacacacagaaatggcagtt 219  Q
    | |||| ||| | || ||||||||| |||||||||||| || ||||||| |||||    
T  29307384 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtt 29307330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 8229640 - 8229796
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt-- 163  Q
    |||||| |||||||  |||||  ||||||| || |||||||||||| |  |   |||||||||| ||| ||||||||| ||||||||| |||||||||      
T  8229640 ttaattacacttttgatcctcacattttgatcaactcacgaaaatgattctacatcttttaaatcgaataaaatcgtctctaaactat-atgtttttttt 8229738  T
Q  164 -gcaattttagtcatgcc-ccctattttcaactccagaaacacacagaaatggcagtt 219  Q
     ||| |||||||| |  | ||||||||  |||||||||||| |||||||||| |||||    
T  8229739 tgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagtt 8229796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 30787307 - 30787245
Alignment:
Q  100 ctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt 163  Q
    ||||||||||||||||| ||| ||| |||| |||||||||||||  |||||||| |||||||||    
T  30787307 ctcacgaaaatggtcatatctttttaaaatcgaacaaaatcgtccttaaactat-atgtttttt 30787245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 1744398 - 1744483
Alignment:
Q  135 aaaatcgtcactaaactatcatgttttttgcaattttagtcatgcc-ccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||||||||| |||||||||    ||||||||| ||||||||||  | |||||||| ||||||||||||| |||| ||||| |||||    
T  1744398 aaaatcgtccctaaactatatatttttttgcagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagtt 1744483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 52268293 - 52268341
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtc 114  Q
    |||||| ||||||| |||||||||||||| || |||||||||| |||||    
T  52268293 ttaattacacttttggtcctcgtattttggcctgctcacgaaattggtc 52268341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 2e-55; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 36701639 - 36701486
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||| || |||||||||||||||||||||    
T  36701639 ttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaactatcatgttttttgc 36701540  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||||| || |||||||||||||||||||||||| |||||||||||||    
T  36701539 agttttagtcatacctcctattttcaactccagaaacacatagaaatggcagtt 36701486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 52236819 - 52236972
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||||||||||| ||||||| ||  ||||||||||||||||  ||||||||||| ||||||||||||| ||||||||| |||||||||||    
T  52236819 ttaattacacttttagtcctcgcattttgaacaattcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgc 52236917  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||||||||||  |||||||||||||||||||||||| |||||||||| |||||    
T  52236918 agttttagtcatatccccctattttcaactccagaaacgcacagaaatgacagtt 52236972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 52375874 - 52375721
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||| |||||||||| ||||||||||||||| |  |||||||||||||||||||||||||  |||||||| |||||||||||    
T  52375874 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaactat-atgttttttgc 52375776  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||||||||||   ||||||||| ||||||||||||| |||||||||| |||||    
T  52375775 agttttagtcatattcccctatttccaactccagaaacgcacagaaatgacagtt 52375721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 63 - 219
Target Start/End: Original strand, 40838652 - 40838808
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| |||||||  |||||| |||||||||| |||||||||||||||||  |||||||||||  ||||||||||||  |||||||| ||||||||    
T  40838652 ggtttaattacacttttgatcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcaaacaaaatcgtccataaactat-atgttttt 40838750  T
Q  163 tgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||| ||||||||||  |||||||||| ||||||||||||| |||||||||| |||||    
T  40838751 tgcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagtt 40838808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 66 - 213
Target Start/End: Complemental strand, 27200234 - 27200088
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | |||||||||||||||||||||||||  || |||||| |||| |||||| | |||| |||||||||||||||||||||    
T  27200234 ttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtc-ctaaactatcatgttttttgc 27200136  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatg 213  Q
    | |||||||||| || ||||||||||||||||||||| || |||||||    
T  27200135 agttttagtcatacctcctattttcaactccagaaacgcagagaaatg 27200088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 49407799 - 49407945
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||||||| |||||| |||| |||||||| |||| ||||||| | ||||||| | |    
T  49407799 ttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaact-ttatgttttgtac 49407897  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatg 213  Q
    | |||||||||| || |||||||||||||||| |||| || |||||||    
T  49407898 agttttagtcatacctcctattttcaactccaaaaacgcagagaaatg 49407945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 63 - 219
Target Start/End: Complemental strand, 44677018 - 44676862
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| ||||||| |||||   |||||||||| ||||||||||||||||| ||| |||||||| |||||||||||||  |||||||| ||||||||    
T  44677018 ggtttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 44676920  T
Q  163 tgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||||||||||||| |  | | |||||||||||||||||||| |||| ||||| |||||    
T  44676919 tgcaattttagtcctatctctctattttcaactccagaaacgcacataaatgacagtt 44676862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 40275636 - 40275484
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||  |||||||||| ||||||||| ||||| |  ||||||||||| ||||||||||||| ||||||||| |||||||||||    
T  40275636 ttaattacacttttggtcctcacattttgaccaactcacgaaa-tggtcctacctcttttaaatcgaacaaaatcgtctctaaactat-atgttttttgc 40275539  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||||||||||  |||||||||| ||||||||||||| |||| ||||| |||||    
T  40275538 agttttagtcatatccccctatttccaactccagaaacgcacaaaaatgacagtt 40275484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 49952089 - 49951936
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| || |||| ||||| | |||||||||| ||||||||| ||||| |  ||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  49952089 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcgaacaaaatcgtcattaaacta-catgttttttgc 49951991  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||||||||||  | |||||||||||||||||||||| |||| ||||| |||||    
T  49951990 agttttagtcatatctccctattttcaactccagaaacgcacataaatgacagtt 49951936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 51827960 - 51828113
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | |||||||||| ||||||||| ||||| |  ||||||||||| ||||||||||||| ||||||||| |||||||||||    
T  51827960 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgc 51828058  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |||||||||||||||||||||| |||| ||||| |||||    
T  51828059 atttttagtcctatctccctattttcaactccagaaacgcacataaatgacagtt 51828113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 63 - 219
Target Start/End: Complemental strand, 40839198 - 40839042
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| ||||||| ||||||  |||||||| | ||||||||||||||| |  ||||||||||| ||||||||||||| ||||||||| ||||||||    
T  40839198 ggtttaattacacttttggtcctcacattttgacaaactcacgaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttt 40839100  T
Q  163 tgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||| |||||||| |  | ||||||||  |||||||||||| |||||||||| |||||    
T  40839099 tgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagtt 40839042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 55192121 - 55192273
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| |||||||||||| || ||||||||||||||||||||||||||  | |||||| ||||  ||||||| ||||  |||||||| ||||||||||     
T  55192121 ttaattacacttttagtccccgcattttgaccagctcacgaaaatggtctcgcctctttcaaatcaaacaaaaccgtccataaactat-atgttttttgt 55192219  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| | || ||||||||||||||||||||| || ||||||| |||||    
T  55192220 agttttagtcctacctcctattttcaactccagaaacgcagagaaatgacagtt 55192273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 219
Target Start/End: Original strand, 8873703 - 8873846
Alignment:
Q  76 ttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgcaattttagt 174  Q
    |||| ||||||| ||||||| ||| | ||||||||||||||||||||||||||| |||||||| ||||| ||| |||||||| ||||||||| |||||||    
T  8873703 ttttggtcctcgcattttgatcagtttacgaaaatggtcatgtctcttttaaatcgaacaaaaccgtca-taacctatcatgtttttttgcagttttagt 8873801  T
Q  175 catgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | | || ||||||||||||| ||||||| || ||||||| |||||    
T  8873802 cttacctcctattttcaacttcagaaacgcagagaaatgacagtt 8873846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 63 - 202
Target Start/End: Original strand, 27199702 - 27199841
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-tttt 161  Q
    ||||||||| || |||| ||||||| ||||||||||||||||||||||||||||| |||||| |||| |||||||| |||||||||||||| ||| ||||    
T  27199702 ggtttaattacatttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtcactaaactat-atgttttt 27199800  T
Q  162 ttgcaattttagtcatgccccctattttcaactccagaaac 202  Q
    ||||| |||||||  | |  |||||||||||||| ||||||    
T  27199801 ttgcagttttagtgctacatcctattttcaactctagaaac 27199841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 43222926 - 43222779
Alignment:
Q  73 cacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgcaatttt 171  Q
    ||||||| ||||||| |||||||| ||| |||||||||||||||| ||||||||||| ||||||||||||| ||||||| | ||| ||||||||| ||||    
T  43222926 cacttttggtcctcgcattttgacaagcgcacgaaaatggtcatgcctcttttaaatcgaacaaaatcgtccctaaact-ttatgtttttttgcagtttt 43222828  T
Q  172 agtcatgcccccta-ttttcaactccagaaacacacagaaatggcagtt 219  Q
    ||||   ||||||| ||||||||||||||||| |||| ||||| |||||    
T  43222827 agtcccaccccctatttttcaactccagaaacgcacaaaaatgacagtt 43222779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 46013425 - 46013572
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| |||||||  |||| | |||||||||| ||||||||| |||||||  ||||||||||| ||||||||||||| ||||| ||| |||||||||||    
T  46013425 ttaattacacttttgatccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtat-atgttttttgc 46013523  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatg 213  Q
    | ||||||||||  | |||||||||||||||||||||| |||| |||||    
T  46013524 agttttagtcatatctccctattttcaactccagaaacgcacataaatg 46013572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 43222416 - 43222546
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcatgcccccta-tt 187  Q
    |||||||||| ||||||||||| || ||||||||||||||| ||||||||||||| ||||||||| |||||||||||| ||||| || | ||||||| ||    
T  43222416 attttgaccaactcacgaaaatagttatgtctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcatttttaatcctaccccctattt 43222514  T
Q  188 ttcaactccagaaacacacagaaatggcagtt 219  Q
    |||||||||||||||  ||| ||||| |||||    
T  43222515 ttcaactccagaaacgtacaaaaatgacagtt 43222546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 50662932 - 50662802
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctatt 187  Q
    |||||||| | ||||||||||| ||||| ||| |||||||| |||||||||||||  |||||||| |||||||||||| |||||||| | || |||||||    
T  50662932 attttgacaaactcacgaaaatagtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctagctccctatt 50662834  T
Q  188 ttcaactccagaaacacacagaaatggcagtt 219  Q
    ||||||||||||||| |||||||||| |||||    
T  50662833 ttcaactccagaaacgcacagaaatgacagtt 50662802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 330379 - 330226
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||| ||| ||||||| |||||||||| ||||||||||||||| |  || ||||||||  |||||||||||| ||||||||| |||||||||||    
T  330379 ttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccctaaactat-atgttttttgc 330281  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||||||||||  | |||||||| |||||| |||||| |||||||||| |||||    
T  330280 agttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagtt 330226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 63 - 204
Target Start/End: Original strand, 2323379 - 2323519
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| || |||| ||||||| ||||||||||| |||| |||||  |  || |||||| |||| |||||||| | || ||||||||||||||||||    
T  2323379 ggtttaattacattttttgtcctcgcattttgaccagttcacaaaaattatactgcctctttcaaatcgaacaaaaccatc-ctaaactatcatgttttt 2323477  T
Q  163 tgcaattttagtcatgccccctattttcaactccagaaacac 204  Q
    ||||||||||||| | || |||||||||||||||||||||||    
T  2323478 tgcaattttagtcctacctcctattttcaactccagaaacac 2323519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 50901070 - 50900918
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||| |||||||||||||||| ||||||| | || |||||  |||| |||||||| |||| ||||||||| |||||||||||    
T  50901070 ttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactat-atgttttttgc 50900972  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||| ||| | || |||||||||||||||| |||| || |||||| ||||||    
T  50900971 agtttttgtcctacctcctattttcaactccataaacgcaaagaaattgcagtt 50900918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 89 - 213
Target Start/End: Original strand, 34104664 - 34104787
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcatgccccctattt 188  Q
    |||||||||| ||||||||||||||  | ||| ||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||  | |||||||    
T  34104664 attttgaccaactcacgaaaatggttctatcttttttaaattgaacaaaatcgtcattaaactat-atgttttttgcagttttagtcatatctcctattt 34104762  T
Q  189 tcaactccagaaacacacagaaatg 213  Q
     || |||||||||| |||| |||||    
T  34104763 ccagctccagaaacgcacaaaaatg 34104787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 201
Target Start/End: Complemental strand, 49720904 - 49720769
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||  ||||||||||| ||||||||||||||||| ||| |||||||| |||||||||||||  |||||||| |||||||||||    
T  49720904 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 49720806  T
Q  166 aattttagtcat-gccccctattttcaactccagaaa 201  Q
    | |||||||| |  | |||||||| ||||||||||||    
T  49720805 agttttagtcttatctccctatttccaactccagaaa 49720769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 202
Target Start/End: Original strand, 36701109 - 36701247
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||| ||||||| || |||||||||||| ||||| |||||| |||| |||||||||||||  ||||||||||||||||||      
T  36701109 ttaattacacttttggtcctcgcattttgatcaactcacgaaaatgatcatgcctctttcaaatcgaacaaaatcgtccataaactatcatgtttttttt 36701208  T
Q  166 aa--ttttagtcatgccccctattttcaactccagaaac 202  Q
    |   ||||||| || || |||||||||||||||||||||    
T  36701209 acggttttagttatccctcctattttcaactccagaaac 36701247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 49408324 - 49408173
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| || |||| |||||||||| ||||||||||||||  ||||||||| |||| ||||||||  ||| ||||||||||||| |||||||    
T  49408324 ttaattacacttttggtactcgcattttgaccatctcacgaaaatggttgtgtctctttcaaatcgaacaaaactgtc-ctaaactatcatgtttttttg 49408226  T
Q  165 caattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| | || |  |||||||||||||||||| || |||||||||||||    
T  49408225 cagttttagtcctacctc--attttcaactccagaaacgcaaagaaatggcagtt 49408173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 212
Target Start/End: Original strand, 49951546 - 49951695
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| ||||||| |||||   |||||||||| ||||||||||||||| | ||| |||||||| |||||||||||||  |||||||| ||||||||    
T  49951546 ggtttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 49951644  T
Q  163 tgcaattttagtcat-gccccctattttcaactccagaaacacacagaaat 212  Q
    ||||||||||||| |  | |||||||| |||||||| |||| |||| ||||    
T  49951645 tgcaattttagtcctatctccctatttccaactccataaacgcacataaat 49951695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 52237360 - 52237207
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||  |||||||||| ||||||||||||||| |  ||||||||||| ||||||||||||| ||||| ||| |||||||||||    
T  52237360 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaattat-atgttttttgc 52237262  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | ||||||||  |||||| ||||| |||||||||| |||||    
T  52237261 agttttagtcctatctccctatttctaactccggaaacgcacagaaatgacagtt 52237207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 52375330 - 52375483
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||  ||||| ||||  ||||||||||||||||  ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  52375330 ttaattacacttttggtcctcacattttaaccaattcacgaaaatggtcatacctcttttaaattgaacaaaatcgtccctaaactat-atgttttttgc 52375428  T
Q  166 aattttag-tcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||| ||   | ||||||||  |||||||||||| || ||||||| |||||    
T  52375429 agttttagttctatctccctatttctaactccagaaacgcatagaaatgacagtt 52375483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 55390140 - 55389987
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||| ||||| ||||  |||||||||||||| |  || ||||||||  |||||||||||||||||||||| ||||||||||     
T  55390140 ttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtcactaaactat-atgttttttgt 55390042  T
Q  166 aattttagtcatgcc-ccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| | || |||||||| |||||||| |||| |||||||||| |||||    
T  55390041 agttttagtcctacctccctatttccaactccataaacgcacagaaatgacagtt 55389987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 219
Target Start/End: Original strand, 55389609 - 55389761
Alignment:
Q  67 taattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgca 166  Q
    ||||| ||||||| ||||||  |||| ||||| ||||||||||||||| |  || |||||||| |||||||||||||  |||||||| ||||||||||||    
T  55389609 taattacacttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgca 55389707  T
Q  167 attttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
     |||||||| |  | |||||||| ||||||||||||| |||||||||| |||||    
T  55389708 gttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtt 55389761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 70 - 208
Target Start/End: Original strand, 12140944 - 12141082
Alignment:
Q  70 ttgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgcaat 168  Q
    ||||||||||  |||||||||||| | ||| ||||||||||||||||| |||||| |||| ||| |||| |||| ||||||||||||| |||||| || |    
T  12140944 ttgcacttttgttcctcgtatttttatcagatcacgaaaatggtcatgcctctttcaaatcgaagaaaa-cgtccctaaactatcatgttttttttcagt 12141042  T
Q  169 tttagtcatgccccctattttcaactccagaaacacacag 208  Q
    ||||||| | ||||||||||||| ||||| |||| |||||    
T  12141043 tttagtcctaccccctattttcacctccaaaaacgcacag 12141082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 47431699 - 47431853
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| |||||   |||||||||| |||||||||||||||||  ||||||||||| |||||||||||||  |||||||| ||| |||||||    
T  47431699 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctttaaactat-atgtttttttg 47431797  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| |  | ||||||||  |||||||||||| |||||||||| |||||    
T  47431798 cagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagtt 47431853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 37076217 - 37076064
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| || |||| ||||||| ||||||| ||||||||||||||||||  | |||||| |||| ||||||||||||| ||||||||||||||||||| |    
T  37076217 ttaattacatttttggtcctcgcattttgatcagctcacgaaaatggtcccgcctctttcaaatcgaacaaaatcgtc-ctaaactatcatgttttttac 37076119  T
Q  166 aattttagtcatgcccccta-ttttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| | ||  ||| |||| ||||| ||||||  | |||||||||||||    
T  37076118 atttttagtcttaccttctattttttaactctagaaacgtagagaaatggcagtt 37076064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 43678298 - 43678451
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   |||||||||| |||||||| |||||||| ||| |||||||| |||||||||||||  |||||||| |||||||||||    
T  43678298 ttaattacacttttggtcctaccattttgaccaactcacgaacatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 43678396  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |||||||| ||||||||||| | |||| ||||| |||||    
T  43678397 agttttagtcttatctccctatttccaactccagaagcgcacataaatgacagtt 43678451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 219
Target Start/End: Original strand, 32730389 - 32730545
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| ||||||| ||||| | |||||||||| |||  |||| ||||| |  ||||||||||||||||||||||||| ||||||||| ||||||||    
T  32730389 ggtttaattacacttttggtccttgcattttgaccaactcttgaaattggtcctacctcttttaaattgaacaaaatcgtccctaaactat-atgttttt 32730487  T
Q  163 tgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||| ||||| || |  | |||||||| |||||| |||||| |||| ||||| |||||    
T  32730488 tgcagttttaatcgtatctccctatttccaactctagaaacgcacataaatgacagtt 32730545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 212
Target Start/End: Original strand, 2044274 - 2044420
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| || |||| |||||||||| |||| ||||||||||||  ||||||||||| |||||||||||||  |||| ||| ||||||||||     
T  2044274 ttaatttcacttttggttctcgcattttgaccaactcatgaaaatggtcatacctcttttaaatcgaacaaaatcgtccataaattat-atgttttttgg 2044372  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaat 212  Q
    | ||||||||||  | |||||||| |||||| |||||| |||| ||||    
T  2044373 agttttagtcatatctccctatttccaactcaagaaacgcacataaat 2044420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 25534893 - 25535047
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgt-cactaaactatcatgttttttg 164  Q
    |||||| ||||||| ||||||| ||||||||||  ||| |||||||||| |  ||||||||||| |||||||||||| | ||||| ||| ||||||||||    
T  25534893 ttaattacacttttggtcctcgcattttgaccaattcatgaaaatggtcctacctcttttaaatcgaacaaaatcgtcccctaaattat-atgttttttg 25534991  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| |  | |||||||| ||||||||||||| |||| ||||| |||||    
T  25534992 cagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagtt 25535047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 50900558 - 50900688
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt-gcaattttagtcatgccccctatt 187  Q
    ||||||| |||||||||||||||||| |  |||||| |||| |||||||| |||| ||||||||||||||||||| ||| |||||||| | ||  |||||    
T  50900558 attttgatcagctcacgaaaatggtcctaactctttcaaatcgaacaaaaccgtc-ctaaactatcatgttttttcgcagttttagtcctaccttctatt 50900656  T
Q  188 ttcaactccagaaacacacagaaatggcagtt 219  Q
    |||||||| ||||||| | ||||||| |||||    
T  50900657 ttcaactctagaaacatagagaaatgacagtt 50900688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 219
Target Start/End: Complemental strand, 8874232 - 8874076
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg--ttt 160  Q
    ||||||||| |||||||  ||| ||  ||||||||||||||||||||||||| ||  |||||||||| |||||||| | || ||||||||| |||  |||    
T  8874232 ggtttaattacacttttcatccccgcgttttgaccagctcacgaaaatggtcctgcttcttttaaatcgaacaaaaccttccctaaactat-atgttttt 8874134  T
Q  161 tttgcaattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||||| |||||||  | ||  |||||||||||||||||||| || ||||||| |||||    
T  8874133 tttgcagttttagttctaccttctattttcaactccagaaacgca-agaaatgacagtt 8874076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 32730909 - 32730779
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctatt 187  Q
    ||||| |||| |||| |||||||||| | ||| ||||||||||||||||||||||  |||||||| |||||||||||| ||||| || |  | |||||||    
T  32730909 attttaaccaactcaagaaaatggtcctatcttttttaaattgaacaaaatcgtccttaaactat-atgttttttgcagttttaatcctatctccctatt 32730811  T
Q  188 ttcaactccagaaacacacagaaatggcagtt 219  Q
    |  |||||||||||| |||||||||| |||||    
T  32730810 tcaaactccagaaacgcacagaaatgacagtt 32730779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 33412697 - 33412610
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactat 153  Q
    |||||| ||||||| ||||||| ||||||| |||||||||||||||||  |||||||||  ||| ||||||||||||| |||||||||    
T  33412697 ttaattacacttttggtcctcgcattttgatcagctcacgaaaatggttctgtctctttcgaatcgaacaaaatcgtccctaaactat 33412610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 41998232 - 41998386
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| |||||   |||||||||| ||| ||||||||||| | ||| |||||||| |||||||||||||  |||||||| ||| |||||||    
T  41998232 ttaattacacttttggtcctaccattttgaccaactcgcgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttg 41998330  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || ||||||||||  | |||||||| |||||||| ||||  ||||||||| |||||    
T  41998331 cagttttagtcatatctccctatttccaactccataaacgaacagaaatgacagtt 41998386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 14654225 - 14654310
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtc 175  Q
    |||||||||| ||||||||||||||| | ||| |||||||| |||||||||||||  |||||||| |||||||||||| ||||||||    
T  14654225 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactat-atgttttttgcatttttagtc 14654310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 38535312 - 38535465
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   |||||||||| |||| |||||||||| | ||| |||||||| |||||||||||||  |||||||| |||||||||||    
T  38535312 ttaattacacttttggtcctaccattttgaccaactcaggaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 38535410  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||| |||| |  | |||||||| |||||||| |||| |||| ||||| |||||    
T  38535411 agtttcagtcctatctccctatttccaactccaaaaacgcacataaatgacagtt 38535465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 44676475 - 44676628
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | |||||||| | |||| |||| || ||||  ||||||||||| |||||||| |||| ||||||||| |||||||||||    
T  44676475 ttaattacacttttggtccttgcattttgacaaactcatgaaattgatcatacctcttttaaatcgaacaaaaccgtccctaaactat-atgttttttgc 44676573  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |  ||||||| |  | |||||||| |||||| |||||| |||||||||| |||||    
T  44676574 agctttagtcctatctccctatttccaactcaagaaacgcacagaaatgacagtt 44676628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 219
Target Start/End: Complemental strand, 51473402 - 51473245
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-tttt 161  Q
    ||||||||| |||||||  ||||   |||||||||| ||||||||||||||| | ||| |||||||| |||||||||||||  |||||||| ||| ||||    
T  51473402 ggtttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 51473304  T
Q  162 ttgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||||| |||||||| |  | |||||||| |||||||| |||| |||| ||||| |||||    
T  51473303 ttgcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagtt 51473245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 22370598 - 22370746
Alignment:
Q  65 tttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-tttttt 163  Q
    ||||||| ||||||| ||||||| |||||||||| ||||||||||||||| |  || |||||||   |||||||||||| ||||||||| ||| ||||||    
T  22370598 tttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactat-atgttttttt 22370696  T
Q  164 gcaattttagtcat-gccccctattttcaactccagaaacacacagaaat 212  Q
    ||| |||||||| |  | || ||| | ||||||||||||| |||||||||    
T  22370697 gcagttttagtcctatctccttatctccaactccagaaacgcacagaaat 22370746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 40275096 - 40275251
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg--tttttt 163  Q
    |||||| ||||||| ||||||  |||||||||| ||||||||||||||| |  ||||||||||| ||||||||| ||| ||||||| | |||  ||||||    
T  40275096 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaattgtccctaaactct-atgtttttttt 40275194  T
Q  164 gcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||| |||||||| |  | || |||||  |||||||||||| |||||||||| |||||    
T  40275195 gcagttttagtcctatctccatatttctaactccagaaacgcacagaaatgacagtt 40275251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 202
Target Start/End: Complemental strand, 41998771 - 41998636
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| ||||| | |||||||||| || |||||| ||||| |  ||||||||||| ||||||||||||| || |||||| ||| |||||||    
T  41998771 ttaattacacttttggtccttgcattttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccct-aactat-atgtttttttg 41998674  T
Q  165 caattttagtcatgccccctattttcaactccagaaac 202  Q
    || |||||||| | | ||||||||||||||| ||||||    
T  41998673 cagttttagtcctactccctattttcaactctagaaac 41998636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 175
Target Start/End: Original strand, 16689358 - 16689469
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| || |||| ||||| | |||||||||| ||||||||| ||||| |  ||||||||||| |||||||||||||  |||| ||| ||||||||    
T  16689358 ggtttaattacagttttggtcctagcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccataaaatat-atgttttt 16689456  T
Q  163 tgcaattttagtc 175  Q
    |||| ||||||||    
T  16689457 tgcagttttagtc 16689469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 37075689 - 37075838
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg---ttttt 162  Q
    |||||| ||||||| |||  || |||||||||| ||||||||||||||| || |||||| ||||  ||||||  |||| ||||||||| |||   |||||    
T  37075689 ttaattacacttttggtctccgcattttgaccaactcacgaaaatggtcctgcctctttcaaatcaaacaaacccgtccctaaactat-atgtttttttt 37075787  T
Q  163 tgcaattttagtcatgccccctattttcaactccagaaacacacagaaatg 213  Q
    |||| |||||||| | || | ||||||||||||||||||| || |||||||    
T  37075788 tgcagttttagtcctacctcttattttcaactccagaaacgcagagaaatg 37075838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 51828501 - 51828347
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| |||||   | |||||||| ||||||||||||||||| | | |||||||| ||||||||| |||  |||||||| ||| |||||||    
T  51828501 ttaattacacttttggtcctaccactttgaccaactcacgaaaatggtcatatattttttaaatcgaacaaaattgtccttaaactat-atgtttttttg 51828403  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| |  | |||||||| ||||||||||||| || ||||||| |||||    
T  51828402 cagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagtt 51828347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 51828542 - 51828696
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| ||||| | ||||||||||  | |||||| ||||| |  ||||||||||| |||||||||||||  |||||||| ||| |||||||    
T  51828542 ttaattacacttttggtccttgcattttgaccaaattacgaaattggtcttacctcttttaaatcgaacaaaatcgtccgtaaactat-atgtttttttg 51828640  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| |  | |||||||| ||||||||||||| |||| ||||| |||||    
T  51828641 cagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagtt 51828696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 329872 - 329957
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtc 175  Q
    |||||||||| ||||||||||||||| |  || |||||||| |||||||||||||  |||||||| |||||||||||| ||||||||    
T  329872 attttgaccaactcacgaaaatggtcctaacttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtc 329957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 49720374 - 49720527
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| |||||||  |||| | |||||||||| ||||||||| ||||| |  ||||||||||| ||||||||||||| ||||| ||| | |||||||||    
T  49720374 ttaattacacttttgatccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaagtat-acgttttttgc 49720472  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | || |||||  |||||||||||| |||| ||||| |||||    
T  49720473 agttttagtcctatctccttatttctaactccagaaacgcacataaatgacagtt 49720527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 12141234 - 12141113
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| |||||||  |||||| ||||| | ||| ||||| |||||||| |  |||||| |||| |||||||| | || |||||||||||||||||||||    
T  12141234 ttaattacacttttgttcctcgcatttttatcagatcacgtaaatggtcctacctctttcaaatcgaacaaaaccatctctaaactatcatgttttttgc 12141135  T
Q  166 aattttagtcatgccccctatt 187  Q
    | ||||| || | |||||||||    
T  12141134 agttttaatcttaccccctatt 12141113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 201
Target Start/End: Complemental strand, 37847344 - 37847228
Alignment:
Q  84 ctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcatgccccc 183  Q
    |||| |||||||  |||||| |||||||||| || |||||| |||| |||||||  |||| |||||||||||||| ||||||| |||||||| |  | ||    
T  37847344 ctcgcattttgataagctcaggaaaatggtcttgcctctttcaaatcgaacaaagccgtccctaaactatcatgt-ttttgcagttttagtcctatctcc 37847246  T
Q  184 tattttcaactccagaaa 201  Q
    ||||||||||| ||||||    
T  37847245 tattttcaacttcagaaa 37847228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 14654732 - 14654581
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | |||||||||| ||||||||| |||   |  ||||||||||| |||||||||||||  ||||||   |||||||||||    
T  14654732 ttaattacacttttggtccttgcattttgaccaactcacgaaattggctctacctcttttaaatcgaacaaaatcgtccgtaaact---atgttttttgc 14654636  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | || ||||| ||||||||||||| |||| ||||| |||||    
T  14654635 agttttagtcctatctccttatttccaactccagaaacgcacataaatgacagtt 14654581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 38535815 - 38535692
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctatt 187  Q
    |||||||||| || |||||| | |||   |||||||||||| ||| ||||||||| ||||||||| |||||||||||| |||||||| |  | |||||||    
T  38535815 attttgaccaacttacgaaattagtccgatctcttttaaatcgaataaaatcgtccctaaactat-atgttttttgcagttttagtcctatctccctatt 38535717  T
Q  188 ttcaactccagaaacacacagaaat 212  Q
    | ||||||||||||| |||| ||||    
T  38535716 tccaactccagaaacgcacataaat 38535692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 16701312 - 16701196
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg---ttttttgcaattttagtcat-gccccct 184  Q
    |||||||||| ||||||||||||||||| ||| |||||| | |||||||||||||  |||||||| |||   ||||||||| ||||||||||  | ||||    
T  16701312 attttgaccaactcacgaaaatggtcatatcttttttaattcgaacaaaatcgtccttaaactat-atgtttttttttgcagttttagtcatatctccct 16701214  T
Q  185 attttcaactccagaaac 202  Q
    |||| |||||||| ||||    
T  16701213 atttccaactccataaac 16701196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 43678827 - 43678674
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | ||||||| || ||||||||  |||||    ||||||||||| |||||||||||||  |||||||| |||||||||||    
T  43678827 ttaattacacttttggtccttgcattttgatcaactcacgaacttggtccaacctcttttaaatcgaacaaaatcgtccataaactat-atgttttttgc 43678729  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||| ||||||  |  ||||||| |||||| |||||| |||| ||||| |||||    
T  43678728 agtttcagtcatatcttcctatttccaactctagaaacgcacataaatgacagtt 43678674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 51829083 - 51828930
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||| |  |||||||| || ||||||||||||||| | ||| |||||| |  ||||||||||||  |||||||| |||||||||||    
T  51829083 ttaattacacttttggtcatactattttgatcaactcacgaaaatggtcgtatcttttttaattcaaacaaaatcgtccttaaactat-atgttttttgc 51828985  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |||||||| ||||| || |||| |||| ||||| |||||    
T  51828984 agttttagtcctatctccctatttccaacttcataaacgcacataaatgacagtt 51828930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 2051298 - 2051394
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt 163  Q
    |||||| ||||||| |||||   |||||||||| ||||||||||||||| | ||| |||||||| ||||||||||||   |||||||| |||||||||    
T  2051298 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgttcttaaactat-atgtttttt 2051394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 34105186 - 34105038
Alignment:
Q  73 cacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg--ttttttgcaattt 170  Q
    ||||||| ||||| | |||||||||| || |||||  ||||| |  ||||||||||| ||||||||||||| ||||||||| |||  ||||||||| |||    
T  34105186 cacttttggtccttgcattttgaccaacttacgaagttggtcctccctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttttgcagttt 34105088  T
Q  171 tagt--catgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||||  ||| | || ||||| ||||| ||||||| |||||||||| |||||    
T  34105087 tagtcccat-ctccttatttccaacttcagaaacgcacagaaatgacagtt 34105038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 46013943 - 46013812
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgcaattttagtcat-gccccctat 186  Q
    |||||||||| ||| | ||||||||  | ||| |||||||| |||||||||||||  |||||||| ||| ||||||||| |||||||| |  | ||||||    
T  46013943 attttgaccaactcccaaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttgcagttttagtcctatctccctat 46013845  T
Q  187 tttcaactccagaaacacacagaaatggcagtt 219  Q
    || ||||||||||||| |||| ||||| |||||    
T  46013844 ttccaactccagaaacgcacataaatgacagtt 46013812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 30513725 - 30513878
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt-tg 164  Q
    |||||| || |||| ||||| | |||||||| | ||||||||||||||| | ||| |||||||| ||| |||||||||  |||||||| |||||||| ||    
T  30513725 ttaattacatttttggtccttgcattttgacaaactcacgaaaatggtcctatcttttttaaatcgaataaaatcgtc-ttaaactat-atgtttttctg 30513822  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || ||||||||||  | || |||||  |||| ||||||| |||||||||| |||||    
T  30513823 cagttttagtcatatctccatatttcgaacttcagaaacgcacagaaatgacagtt 30513878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 39010541 - 39010487
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtc 143  Q
    ||||||||||||||||||||||| || | ||| |||||||| |||||||||||||    
T  39010541 attttgaccagctcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtc 39010487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 219
Target Start/End: Original strand, 51472866 - 51473011
Alignment:
Q  74 acttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttag 173  Q
    |||||| ||||| | |||||||||| |||| |||| |  || |  |||||||||||  |||||||| ||| ||||| ||| |||||||||||| ||||||    
T  51472866 acttttggtccttgcattttgaccaactcatgaaatttttcctacctcttttaaatcaaacaaaattgtccctaaagtat-atgttttttgcagttttag 51472964  T
Q  174 tcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |  | |||||||| |||||||| |||| |||||||||| |||||    
T  51472965 tcctatctccctatttccaactccataaacgcacagaaatgacagtt 51473011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 197
Target Start/End: Original strand, 39010078 - 39010209
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| || |||| ||||| | |||||||||| ||||| ||| || ||||  ||||||||||| ||||||||| ||   |||||| | |||||||||||    
T  39010078 ttaattacatttttggtccttgcattttgaccaactcacaaaattgctcatacctcttttaaatcgaacaaaattgttcttaaactgt-atgttttttgc 39010176  T
Q  166 aattttagtca-tgccccctattttcaactcca 197  Q
    | |||||||||   | |||||||||||||||||    
T  39010177 agttttagtcacatctccctattttcaactcca 39010209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 4275906 - 4275752
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaatt-gaacaaaatcgtcactaaactatcatgttttttg 164  Q
    |||||| ||||||| |||||||| ||||| ||  ||||||||| |||||||| ||||||||||   ||||||||  |||  | || |||||| ||| |||    
T  4275906 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatg-ctcttttaaaacagaacaaaacggtcctttaattatcatttttgttg 4275808  T
Q  165 caattttagtcatgccccctattttcaa-ctccagaaacacacagaaatggcagtt 219  Q
    || |||| ||| | || ||||||||||| ||||| |||| || |||||||||||||    
T  4275807 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagtt 4275752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 8e-42; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 63 - 197
Target Start/End: Complemental strand, 20266461 - 20266327
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||| ||||||||||||| || |    
T  20266461 ggtttaattgcacttttggtcctcgtattttgaccagcttacgaaaatggtcatgtctctttcaaatcgaacaaaatcgtccctaaactatcatggttgt 20266362  T
Q  163 tgcaattttagtcatgccccctattttcaactcca 197  Q
    || | |||||||| | ||||||||||||| |||||    
T  20266361 tgtagttttagtcctaccccctattttcacctcca 20266327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 10721789 - 10721941
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| || |||| ||||||  |||||||||||||||||||||||||| ||||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  10721789 ttaattacatttttggtcctcacattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaatcgtc-ctaaactatcatgttttttgc 10721887  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| | || |||||||||||||||||||||  | ||||||| |||||    
T  10721888 agttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagtt 10721941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 27307064 - 27307216
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| || |||| |||||||||| || | |||||||||||||| ||||| ||||||||||||||| || |||||||||||||||||||||    
T  27307064 ttaattacacttttggttctcgcattttgaccaacttatgaaaatggtcatgtttctttcaaattgaacaaaatcatc-ctaaactatcatgttttttgc 27307162  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| | || ||||||||||||||||||||| || ||||||| |||||    
T  27307163 agttttagtcttacctcctattttcaactccagaaacgcatagaaatgacagtt 27307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 219
Target Start/End: Original strand, 4966818 - 4966971
Alignment:
Q  65 tttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttg 164  Q
    ||||||| ||||||| ||||||| |||||||||| ||||||||||| ||  || ||||||||||| ||||||||||||| ||||||||| |||||||| |    
T  4966818 tttaattacacttttggtcctcgcattttgaccaactcacgaaaatagtactgcctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttag 4966916  T
Q  165 caattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || ||||||||||  ||||||||| |||||| |||||  |||||||||| |||||    
T  4966917 cagttttagtcatatcccctatttccaactctagaaatgcacagaaatgacagtt 4966971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 22651348 - 22651501
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| || |||| || |||||||||||||||||||||| ||||||||||| |||||||||||  ||||||| | ||  |||||||||||| |||||||    
T  22651348 ttaattacatttttggttctcgtattttgaccagctcacggaaatggtcatgcctcttttaaatcaaacaaaaccatccttaaactatcatg-tttttgc 22651446  T
Q  166 aattttagtcatgcc-ccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| | || || ||||||||||||||||||| |||| |||||||||||    
T  22651447 agttttagtcctacctccttattttcaactccagaaacgcacaaaaatggcagtt 22651501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 41834602 - 41834449
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| ||||||| |||||||||||||||||||||||||| || |||||| | || |||||||| |||| ||||||||||||| |||||||    
T  41834602 ttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtc-ctaaactatcatgtttttttg 41834504  T
Q  165 caattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| | || ||||||||||||||  ||||| || ||||||| |||||    
T  41834503 cagttttagtcctacctcctattttcaactcttgaaacgcagagaaatgacagtt 41834449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 16752585 - 16752731
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||  | ||||||||||||||||||||||| |||||  ||||| |||| |||||||||||||  |||||||| |||||||||||    
T  16752585 ttaattacacttttggtccctgcattttgaccagctcacgaaaatgatcatgcttctttcaaatcgaacaaaatcgtccataaactat-atgttttttgc 16752683  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatg 213  Q
    | |||| ||||| || |||||||||||||||| |||| || |||||||    
T  16752684 agtttttgtcatacctcctattttcaactccataaacgcaaagaaatg 16752731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 76 - 219
Target Start/End: Original strand, 32305831 - 32305973
Alignment:
Q  76 ttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtc 175  Q
    |||| ||| ||| ||||||| |||||||||||||| ||  |  ||||||||||| ||||||||||||| ||||||||||||| |||||||| ||||||||    
T  32305831 ttttggtcatcgcattttgatcagctcacgaaaattgttctacctcttttaaatcgaacaaaatcgtccctaaactatcatg-tttttgcagttttagtc 32305929  T
Q  176 atgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
     | || | |||||||||||||||||||||| ||||||| |||||    
T  32305930 ctacctcttattttcaactccagaaacacagagaaatgacagtt 32305973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 197
Target Start/End: Original strand, 28595183 - 28595313
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||||||||||| ||||||||||||||||||||| || ||||||||||||  ||||| |||  ||||||||||||| ||||||||||||| || |||     
T  28595183 ttaattgcacttttggtcctcgtattttgaccagcttacaaaaatggtcatgcttctttcaaaacgaacaaaatcgtccctaaactatcatggttcttg- 28595281  T
Q  166 aattttagtcatgccccctattttcaactcca 197  Q
     | ||||||||| |||| |||||||| |||||    
T  28595282 tagtttagtcataccccatattttcacctcca 28595313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 13557011 - 13557140
Alignment:
Q  82 tcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcatgccc 181  Q
    |||||| ||||||||||||||||||||||||||||| |||||| ||||  ||||||||||||  ||||||||||||||||||||| |||||||| | |      
T  13557011 tcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcaaacaaaatcgtc-ttaaactatcatgttttttgcagttttagtcctacat 13557109  T
Q  182 cctattttcaactccagaaacacacagaaat 212  Q
    | |||||| |||| ||||||| || ||||||    
T  13557110 cttattttgaactgcagaaacgcagagaaat 13557140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 28290187 - 28290034
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   |||||||||| ||||||||||||||| | ||  |||||||| |||||||||||||  |||||||| |||||||||||    
T  28290187 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 28290089  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |||||||| ||||||||||||| |||||||||| |||||    
T  28290088 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtt 28290034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 66 - 202
Target Start/End: Original strand, 28494847 - 28494982
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   ||||||||||| ||| |||||||||  || |||||| |||| ||||||||  ||| |||||||||||||||||||||    
T  28494847 ttaattacacttttggtccttacattttgaccagttcaggaaaatggttctgcctctttcaaatcgaacaaaactgtc-ctaaactatcatgttttttgc 28494945  T
Q  166 aattttagtcatgccccctattttcaactccagaaac 202  Q
    | |||||||| | || |||||||||||||||||||||    
T  28494946 agttttagtcctacctcctattttcaactccagaaac 28494982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 67 - 222
Target Start/End: Original strand, 38900648 - 38900803
Alignment:
Q  67 taattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgca 166  Q
    ||||| ||||||| ||||||| |||||||||| |||||||||||| || |  ||||||||||| ||||||||||||| ||||| ||| ||||||||||||    
T  38900648 taattacacttttggtcctcgcattttgaccaactcacgaaaatgatcctacctcttttaaatcgaacaaaatcgtccctaaattat-atgttttttgca 38900746  T
Q  167 attttagtcat-gccccctattttcaactccagaaacacacagaaatggcagttagt 222  Q
     |||||||| |  | |||||||| |||||||| ||||  ||| ||||| ||||||||    
T  38900747 gttttagtcctatctccctatttccaactccataaacgtacataaatgacagttagt 38900803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 28289687 - 28289840
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| |||||||  |||| | |||||||||| ||||||||| | |||||  ||||||||||| ||||||||||||| ||||| ||| ||||||||| |    
T  28289687 ttaattacacttttgatccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaattat-atgttttttcc 28289785  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |||||||| ||||||||||||| |||||||||| |||||    
T  28289786 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtt 28289840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 213
Target Start/End: Complemental strand, 32697769 - 32697619
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtt---ttt 162  Q
    |||||| ||||||| ||| | | |||||||||| ||||||||| ||||| |  ||||||||||| ||||| ||||||| ||||||||| |||||   |||    
T  32697769 ttaattacacttttggtcattgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacagaatcgtccctaaactat-atgttttattt 32697671  T
Q  163 tgcaattttagtcatgcc-ccctattttcaactccagaaacacacagaaatg 213  Q
    |||| ||||||| || || |||||||| ||||||||||||||||||||||||    
T  32697670 tgcagttttagtgatacctccctatttccaactccagaaacacacagaaatg 32697619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 213
Target Start/End: Complemental strand, 8419163 - 8419017
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   |||||||||| |||||||| |||||| | ||| ||||||||||||||||||||||  |||||||| || ||||||||    
T  8419163 ttaattacacttttggtcctaccattttgaccaactcacgaatatggtcctatcttttttaaattgaacaaaatcgtccttaaactat-at-ttttttgc 8419066  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatg 213  Q
    | |||||||| |  | |||||||| ||||||||||||| ||||||||||    
T  8419065 agttttagtcctatctccctatttccaactccagaaacgcacagaaatg 8419017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 15029852 - 15029699
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||  |||||||||| ||||||||||||||| |  || |||||||| |||||||||||||  |||||||| |||||||||||    
T  15029852 ttaattacacttttggtcctcccattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 15029754  T
Q  166 aattttag-tcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||| ||   | ||||||||  |||||||||||| |||| ||||| |||||    
T  15029753 agttttagttcgatctccctatttcaaactccagaaacgcacataaatgacagtt 15029699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 21371239 - 21371086
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| |||||||  |||| | |||||||||| ||||  ||| ||||| |  |||||||||||  |||||||||||| ||||||||| |||||||||||    
T  21371239 ttaattacacttttgatccttgcattttgaccaactcataaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaactat-atgttttttgc 21371141  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||||||||| |  | |||||||| ||||||||||||| |||| ||||| |||||    
T  21371140 aattttagtcctatctccctatttccaactccagaaacgcacataaatgacagtt 21371086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 160
Target Start/End: Complemental strand, 22651854 - 22651760
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttt 160  Q
    |||||| ||||||| ||||||| |||||||||||||||||||||||||  || || ||| |||| |||||||||||||  |||||||| ||||||    
T  22651854 ttaattacactttttgtcctcgcattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaatcgtccataaactattatgttt 22651760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 4967314 - 4967218
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt 163  Q
    |||||| ||||||| ||||||  |||||||||| ||||| ||||||||| |  ||||||||||| ||||||||||||| ||||||||| |||||||||    
T  4967314 ttaattacacttttggtcctcacattttgaccaactcacaaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 4967218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 213
Target Start/End: Complemental strand, 28495374 - 28495237
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||  | |||||||||||||||||||||||||||||| |||||| |||| ||||||||| |||          | ||||||||||    
T  28495374 ttaattacacttttggtctccatattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaattgtc----------cctgttttttgc 28495285  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatg 213  Q
    | |||||||| | || ||||||||||||||||||| | || |||||||    
T  28495284 agttttagtcctacctcctattttcaactccagaaccgcagagaaatg 28495237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 39083384 - 39083516
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatc-atgttttttgcaattttagtcatgccccc-tat 186  Q
    |||||||||| ||||||||||||||| | | | |||||||| ||||||||| ||   ||||||||  || ||||||||| ||||||||||  | || |||    
T  39083384 attttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaattgttcttaaactatatatattttttgcagttttagtcatatctccatat 39083483  T
Q  187 tttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||||||||||||||||||| |||||    
T  39083484 ttccaactccagaaacacacagaaatgacagtt 39083516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 19291359 - 19291513
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| |||||  |||||||| || ||||| ||||||||| | ||| |||||||| |||||||||||||  |||||||| ||| |||||||    
T  19291359 ttaattacacttttggtcctactattttgaacaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttg 19291457  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| |  | || ||||| |||||||| |||| |||||||||| |||||    
T  19291458 cagttttagtcttatctccttatttccaactccataaacgcacagaaatgacagtt 19291513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 18149759 - 18149844
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtc 175  Q
    |||| ||||| ||||||||||||||| | ||| |||||||| |||||||||||||  |||||||| |||||||||||| ||||||||    
T  18149759 atttggaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtc 18149844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 15115635 - 15115485
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| |||||||  |||||  |||||||||| ||||||||||||||| |  ||||||||||| |||||||||||||  ||||||||     |||||||    
T  15115635 ttaattacacttttgatcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccttaaactat----atttttgc 15115540  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||||||||||  | |||||||| |||||| | |||| |||| ||||| |||||    
T  15115539 agttttagtcatatcgccctatttccaactcaaaaaacgcacataaatgacagtt 15115485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 18150251 - 18150119
Alignment:
Q  82 tcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgcaattttagtcat-gc 179  Q
    |||| |||||||||| | ||||||||| ||||| |  ||||||||||| |||||||||| || ||||||||| ||| ||||||||| |||||||| |  |    
T  18150251 tccttgtattttgacaaactcacgaaattggtcctacctcttttaaatcgaacaaaatcatccctaaactat-atgtttttttgcagttttagtcctatc 18150153  T
Q  180 cccctattttcaactccagaaacacacagaaatg 213  Q
     |||||||| ||||||||||||| |||| |||||    
T  18150152 tccctatttccaactccagaaacgcacataaatg 18150119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 16753113 - 16752959
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt-- 163  Q
    |||||| || |||| ||| ||| |||||||||| ||||||||||||||  || |||||| |||| |||| ||| | || ||||| |||||||||||||      
T  16753113 ttaattacatttttggtcatcgcattttgaccaactcacgaaaatggttctgcctctttcaaatcgaacgaaaccatc-ctaaattatcatgtttttttt 16753015  T
Q  164 gcaattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||| |||||| | |  | ||||||||||||||||||||| || | |||||||||||    
T  16753014 gcagttttagacctaactcctattttcaactccagaaacgcagaaaaatggcagtt 16752959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 191
Target Start/End: Original strand, 17260350 - 17260454
Alignment:
Q  87 gtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcatgccccctat 186  Q
    ||||||||| ||| |||| ||||||||  ||  ||||| |||| ||||||||| |||  |||| |||||||||||||||| |||||||| | ||||||||    
T  17260350 gtattttgatcagttcacaaaaatggttctgcatctttcaaatcgaacaaaattgtccataaattatcatgttttttgcagttttagtcctaccccctat 17260449  T
Q  187 tttca 191  Q
    |||||    
T  17260450 tttca 17260454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 197
Target Start/End: Complemental strand, 14465029 - 14464929
Alignment:
Q  97 cagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcatgccccctattttcaactcc 196  Q
    ||||||||||||||  | |||||  ||| |||| ||| ||||||||| ||||| |||||| ||||||||| ||||| |||| |||| |||||||| ||||    
T  14465029 cagctcacgaaaattattatgtccttttcaaatcgaataaaatcgtccctaaattatcatattttttgcagttttaatcataccccttattttcacctcc 14464930  T
Q  197 a 197  Q
    |    
T  14464929 a 14464929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 201
Target Start/End: Complemental strand, 27307595 - 27307466
Alignment:
Q  74 acttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg---ttttttgcaattt 170  Q
    |||||| |||| || ||||||||||| |||||||||||||  |  |||||| |||| |||||||| ||||  |||||||| |||   ||||||| | |||    
T  27307595 acttttggtccccgcattttgaccagttcacgaaaatggttctccctctttcaaatcgaacaaaaccgtccataaactat-atgtttttttttgtagttt 27307497  T
Q  171 tagtcatgccccctattttcaactccagaaa 201  Q
    ||||| | || ||||||||||||||||||||    
T  27307496 tagtcctacctcctattttcaactccagaaa 27307466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 21370686 - 21370776
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactat 153  Q
    |||||||||  | |||| |||||  ||||||||||| || ||||||||||| || ||| |||||||| |||||||||||||  ||||||||    
T  21370686 ggtttaattatattttttgtcctactattttgaccaactgacgaaaatggttatatcttttttaaatcgaacaaaatcgtctttaaactat 21370776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 17260763 - 17260666
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt 163  Q
    |||||||||||||| ||||||| ||||||||||  ||||||||||| |  |  |||||| |||| |||||||| | || |||||||||| | ||||||    
T  17260763 ttaattgcacttttggtcctcgcattttgaccaattcacgaaaatgattctacctctttcaaatcgaacaaaaccatccctaaactatcgtttttttt 17260666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 14340930 - 14340866
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactat 153  Q
    |||||||||| ||||||||| |||||||   |||||||||| |||||||||||||  ||||||||    
T  14340930 attttgaccaactcacgaaattggtcatacatcttttaaatcgaacaaaatcgtccataaactat 14340866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 175
Target Start/End: Complemental strand, 5162089 - 5162003
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgcaattttagtc 175  Q
    |||||||||| |||| || | | |||||  ||||||||||| ||||||||||||| ||||| ||| ||| ||||||||||||||||||    
T  5162089 attttgaccaactcatgagattagtcatacctcttttaaatcgaacaaaatcgtccctaaattat-atgtttttttgcaattttagtc 5162003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 14340424 - 14340478
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtc 143  Q
    ||||||| || ||||||||||||||| | ||| |||||||| |||||||||||||    
T  14340424 attttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtc 14340478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 25973838 - 25973938
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    |||||||||| | |||| ||||||| |||| ||||  ||||||||| |||||||| || |||  ||| ||||||||  ||| | | ||||||||||||||    
T  25973838 ggtttaattgtattttttgtcctcgcatttagaccgactcacgaaattggtcatgcctttttcgaatcgaacaaaacagtccccatactatcatgttttt 25973937  T
Q  163 t 163  Q
    |    
T  25973938 t 25973938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 38901127 - 38901076
Alignment:
Q  122 ttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagt 174  Q
    |||||||| |||||||||||||  |||||||| |||||||||||| |||||||    
T  38901127 ttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagt 38901076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 8e-39; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 28143572 - 28143420
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||| |||||||||||||||||||||||||| || |||||| |||| ||||||||||||| |||||||||||||| ||||||    
T  28143572 ttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgt-ttttgc 28143474  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| | |  ||||||||||||||||||||| || ||||||| |||||    
T  28143473 agttttagtcctacgtcctattttcaactccagaaacgcagagaaatgacagtt 28143420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 31797320 - 31797168
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||  ||||||||||||||||||||||||||||| |||||| |||| |||||||| |||| ||||||||| |||||||||||    
T  31797320 ttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactat-atgttttttgc 31797222  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| | || |||||||||||||| |||||| || ||||||| |||||    
T  31797221 agttttagtcctacctcctattttcaactctagaaacgcagagaaatgacagtt 31797168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 42192786 - 42192632
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| ||||||| |||||||||| ||||||||||||||| |  ||||||||||| ||||||||||||| ||||||||  ||| |||||||    
T  42192786 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaacta-gatgtttttttg 42192688  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || ||||||||||  |||||||||| ||||||||||||| |||||||||| |||||    
T  42192687 cagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagtt 42192632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 4355758 - 4355911
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | |||||||||  ||||||||| |||||||  ||||||||||| ||||||||||||| ||||||||| |||||||||||    
T  4355758 ttaattacacttttggtccttgcattttgacctactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgc 4355856  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |||||||||||||||||||||| |||| ||||| |||||    
T  4355857 agttttagtcctatctccctattttcaactccagaaacgcacataaatgacagtt 4355911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 14942389 - 14942234
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtt--tttt 163  Q
    |||||| ||||||| ||| ||| |||||||||||||||||||||||||| ||||||||| |||| ||||||||| |||  |||| |||||||||  ||||    
T  14942389 ttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaattatcatgtttttttt 14942290  T
Q  164 gcaattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||| |||||||| | |  ||||||||||||||||||||  || |||||| ||||||    
T  14942289 gcagttttagtcctacatcctattttcaactccagaaatgcagagaaatcgcagtt 14942234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 219
Target Start/End: Complemental strand, 11540173 - 11540028
Alignment:
Q  74 acttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttag 173  Q
    |||||| ||| ||| |||||||||| ||||||||||||||| |  ||||||||||| |||||||||||||  |||||||| |||||||||||| ||||||    
T  11540173 acttttggtcatcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat-atgttttttgcagttttag 11540075  T
Q  174 tcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||||    |||||||| ||||||||||||| |||||||||| |||||    
T  11540074 tcatatatccctatttccaactccagaaacgcacagaaatgacagtt 11540028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 42192243 - 42192396
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||  |||||||||| ||||||||||||||| |  ||||||||||| ||||||||||||| ||||||||| |||||||||||    
T  42192243 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgc 42192341  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | ||||||||  |||||||||||| |||| ||||| |||||    
T  42192342 agttttagtcctatctccctatttctaactccagaaacgcacataaatgacagtt 42192396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 202
Target Start/End: Complemental strand, 44220188 - 44220050
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||| |||||||||| |||||||||||||||||  || ||||||||  |||||||||||| ||||||||| ||||||||||     
T  44220188 ttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtcataccttttttaaatcaaacaaaatcgtccctaaactat-atgttttttgt 44220090  T
Q  166 aattttagtcat---gccccctattttcaactccagaaac 202  Q
    | ||||||||||    |||||||||| |||||||||||||    
T  44220089 agttttagtcatatctccccctatttccaactccagaaac 44220050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 171
Target Start/End: Original strand, 20495193 - 20495301
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| ||||||| || |||| |||||||||| |||||||||||| ||||| |||||||||||  |||||||||||| |||||||||||| |||||    
T  20495193 ggtttaatttcacttttggttctcgcattttgaccaactcacgaaaatgatcatgcctcttttaaatctaacaaaatcgtccctaaactatcatattttt 20495292  T
Q  163 tgcaatttt 171  Q
    |||| ||||    
T  20495293 tgcactttt 20495301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 38007953 - 38008107
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| ||||| | |||||||||| ||||||||| ||||| |  ||||||||||| ||||||||||||| ||||||||| ||| |||||||    
T  38007953 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttg 38008051  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || ||||||||||  | |||||||| |||||||| |||| |||||||||| |||||    
T  38008052 cagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagtt 38008107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 33920615 - 33920768
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| || |||| ||||| | |||||||||| ||||||||| || ||||  ||||||||||| ||||||||||||| ||||||||| ||| |||||||    
T  33920615 ttaattacatttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactat-atgatttttgc 33920713  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |||||||||||||||||||||| || ||||||| |||||    
T  33920714 agttttagtcctatctccctattttcaactccagaaacgcatagaaatgacagtt 33920768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 219
Target Start/End: Original strand, 13399460 - 13399578
Alignment:
Q  101 tcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctattttcaactccaga 199  Q
    |||||||| |||||||  ||||||||||| ||||||||||||| ||||||||| |||||||||||| |||||||| |  | |||||||| ||||||||||    
T  13399460 tcacgaaattggtcatacctcttttaaatggaacaaaatcgtccctaaactat-atgttttttgcagttttagtcctatctccctatttccaactccaga 13399558  T
Q  200 aacacacagaaatggcagtt 219  Q
    ||| |||||||||| |||||    
T  13399559 aacgcacagaaatgacagtt 13399578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 43160012 - 43160166
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactat-catgttttttg 164  Q
    |||||| || |||| ||||| | ||||||| || ||||||||| |||||||  ||||||||||| ||||||||||||| ||||||||| ||| |||||||    
T  43160012 ttaattacatttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatacat-ttttttg 43160110  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| |  | |||||||||||||||||||||| |||| ||||| |||||    
T  43160111 cagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagtt 43160166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 219
Target Start/End: Original strand, 15550673 - 15550830
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-tttt 161  Q
    ||||||||| |||||||  |||| | ||| |||||| ||||||||| ||||| |  ||||||||||| ||||||||||||| ||||||||| ||| ||||    
T  15550673 ggtttaattacacttttgatccttgcattctgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttt 15550771  T
Q  162 ttgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||||| |||||||| |    |||||||||||||||||||||| |||||||||| |||||    
T  15550772 ttgcagttttagtcctatttccctattttcaactccagaaacgcacagaaatgacagtt 15550830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 20128280 - 20128127
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | ||||| |||| ||||||||| ||||| |  |||||||||||  ||||||||||||  |||||||| |||||||||||    
T  20128280 ttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccttaaactat-atgttttttgc 20128182  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||||||||| |  | |||||||| ||||||||||||| |||| ||||| |||||    
T  20128181 aattttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagtt 20128127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 649530 - 649677
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | || ||||||| || |||||| ||||| |  ||||||||||| ||||||||||||| ||||||||| |||||||||||    
T  649530 ttaattacacttttggtccttgcatcttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgc 649628  T
Q  166 aattttagtcatg-ccccctattttcaactccagaaacacacagaaatg 213  Q
    | |||||||  || | |||||||| ||||||||||||| |||| |||||    
T  649629 agttttagttctgtctccctatttccaactccagaaacgcacataaatg 649677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 177
Target Start/End: Complemental strand, 5037241 - 5037130
Alignment:
Q  65 tttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttg 164  Q
    |||||||||| ||||| |||||  ||||||| | | ||| ||||||||||||| ||||||||||||||||||||||||| |||||||| ||||| |||||    
T  5037241 tttaattgcattttta-tcctcacattttgatcggttcatgaaaatggtcatgcctcttttaaattgaacaaaatcgtccctaaactaacatgtcttttg 5037143  T
Q  165 caattttagtcat 177  Q
    |  ||||||||||    
T  5037142 ctgttttagtcat 5037130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 174
Target Start/End: Original strand, 5560054 - 5560161
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   |||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||  |||||||| || ||||||||    
T  5560054 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaattgaacaaaatcgtccttaaactat-atattttttgc 5560152  T
Q  166 aattttagt 174  Q
    | |||||||    
T  5560153 agttttagt 5560161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 213
Target Start/End: Complemental strand, 38008494 - 38008347
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   |||||||||| ||||||||||||||| | ||| |||||||| |||||||||||||  |||||||| |||||||||||    
T  38008494 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 38008396  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatg 213  Q
    | |||||||| |  | |||||||| |||||||| |||| |||| |||||    
T  38008395 agttttagtcctatctccctatttccaactccataaacgcacataaatg 38008347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 213
Target Start/End: Complemental strand, 43216252 - 43216105
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||||||||| |  ||||||||| ||||||||| ||||| |  ||||||||||| ||||||||||||| ||||||||| || ||||||||    
T  43216252 ttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atattttttgc 43216154  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatg 213  Q
    | |||||||| |  | | |||||| ||||||||||||  ||||||||||    
T  43216153 agttttagtcctatctctctatttccaactccagaaatgcacagaaatg 43216105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 4356299 - 4356146
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   |||||||||| ||||||| ||||||||| ||| |||||||| |||||||||||||  |||||||| |||||||||||    
T  4356299 ttaattacacttttggtcctatcattttgaccaactcacgataatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 4356201  T
Q  166 aatttt-agtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||| | ||     |||||||| ||||||||||||| |||||||||| |||||    
T  4356200 agttttaattctatttccctatttccaactccagaaacgcacagaaatgacagtt 4356146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 13399962 - 13399810
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    ||||||||| ||||||||||   |||||||||| ||||||||||||||| | | |||||||||| ||||||||| |||  |||||||| || ||||||||    
T  13399962 ttaattgcaattttagtcctaccattttgaccaactcacgaaaatggtc-tatttcttttaaatcgaacaaaattgtccttaaactat-atattttttgc 13399865  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||||||||||  | |||||||| |||||||| |||| || ||||||| |||||    
T  13399864 agttttagtcatatctccctatttccaactccataaacgcatagaaatgacagtt 13399810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 219
Target Start/End: Complemental strand, 9330340 - 9330184
Alignment:
Q  64 gtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttt 162  Q
    |||||||| ||||||| ||||| | |||||||||| ||||||||| | |||||  ||||||||||| ||||||||||||| | ||||||| ||| |||||    
T  9330340 gtttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgtccccaaactat-atgtttttt 9330242  T
Q  163 tgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||| |||||||| |  |  |||||||||||||  ||||||||| ||||||| |||||    
T  9330241 tgcagttttagtcctatctacctattttcaactatagaaacacatagaaatgacagtt 9330184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 63510 - 63411
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    |||||||||  | |||| ||||| |||||||||||| ||||||||||||||| | ||||||||||||  |||||||||||| ||||||||| ||||||||    
T  63510 ggtttaattatatttttggtccttgtattttgaccaactcacgaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactat-atgttttt 63412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 11539640 - 11539794
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| |||||   |||||||||| ||||||||||||||| | | | |||||||| |||||||||||||  |||||||| ||| |||||||    
T  11539640 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttg 11539738  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| |  | |||||||| ||||||||||||| |||| ||||| |||||    
T  11539739 cagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagtt 11539794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 33921155 - 33921001
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| |||||   |||||||||| ||||||||||||||| | ||| |||||||| |||||||||||||  |||||||  ||| |||||||    
T  33921155 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaacta-aatgtttttttg 33921057  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| |  | |||||||| |||||| |||||| |||||||||| |||||    
T  33921056 cagttttagtcctatctccctatttccaactctagaaacgcacagaaatgacagtt 33921001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 202
Target Start/End: Complemental strand, 2190612 - 2190482
Alignment:
Q  73 cacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgcaatttt 171  Q
    ||||||| ||| ||| |||||||||||||||||||| ||||| || || ||| |||| ||||||||||||| ||||| ||||| | ||||||||| ||||    
T  2190612 cacttttggtcatcgcattttgaccagctcacgaaattggtcctgcctttttcaaatcgaacaaaatcgtccctaaattatcacgcttttttgcagtttt 2190513  T
Q  172 agtcatgccccctattttcaactccagaaac 202  Q
    |||| | ||||| | ||||| ||||| ||||    
T  2190512 agtcctacccccgaatttcatctccaaaaac 2190482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 4808882 - 4809035
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| || ||||||| || | |||||||||| ||||||||| || || |  ||||||||||| |||||||||||||  |||||||| ||||||||||     
T  4808882 ttaattacatttttagttcttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccataaactat-atgttttttgt 4808980  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  |  ||||||| ||||||||||||| |||||||||| |||||    
T  4808981 agttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagtt 4809035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 67 - 219
Target Start/End: Complemental strand, 16175892 - 16175739
Alignment:
Q  67 taattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgc 165  Q
    ||||| ||||||| |||||   ||||| |||| ||||||||| |||||||  ||||||||||| |||||||||||||  |||||||| ||| ||||||||    
T  16175892 taattacacttttggtccttacatttttaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccttaaactat-atgtttttttgc 16175794  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |||||||| ||||||||||||| |||| ||||| |||||    
T  16175793 agttttagtcctatctccctatttccaactccagaaacgcacataaatgacagtt 16175739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 16953477 - 16953324
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | |||||||||| |||| |||| ||||| |  ||||||||||| ||||||||  ||| ||||| ||| |||||||||||    
T  16953477 ttaattacacttttggtccttgcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaaatgtccctaaagtat-atgttttttgc 16953379  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |||||||| |||||||| |||| |||||||||| |||||    
T  16953378 agttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagtt 16953324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 32418162 - 32418307
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||| | ||||| | |||||||||| ||||||||| ||||| |  ||||||  ||| ||||||||||||| ||||||||| || ||||||||    
T  32418162 ttaattacacttatggtccttgcattttgaccaactcacgaaattggtcctacctcttt--aatcgaacaaaatcgtccctaaactat-atattttttgc 32418258  T
Q  166 aattttagtcatgccccct-attttcaactccagaaacacacagaaatg 213  Q
    | ||||||||||  | ||| |||| ||||||||||||| ||||||||||    
T  32418259 agttttagtcatatctccttatttccaactccagaaacgcacagaaatg 32418307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 13315493 - 13315634
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| ||||||| |||||   |||||||||| |||| |||||||||||| ||| |||||||| |||||||||||||  |||||||| ||||||||    
T  13315493 ggtttaattacactttttgtcctaccattttgaccaactcatgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 13315591  T
Q  163 t---gcaattttagtcatgcc-ccctattttcaactccagaaa 201  Q
    |   ||| |||||||| |  | |||||||| ||||||||||||    
T  13315592 ttttgcagttttagtcctatctccctatttccaactccagaaa 13315634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 43160531 - 43160400
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgcaattttagtcat-gccccctat 186  Q
    |||||||| | ||||||||||||||| | ||| |||||||| |||| ||||||||  |||||||| ||| ||||||||| |||||||| |  | ||||||    
T  43160531 attttgacaaactcacgaaaatggtcctatcttttttaaatcgaactaaatcgtccttaaactat-atgtttttttgcagttttagtcctatctccctat 43160433  T
Q  187 tttcaactccagaaacacacagaaatggcagtt 219  Q
    || ||||||||||||| |||||||||| |||||    
T  43160432 ttccaactccagaaacgcacagaaatgacagtt 43160400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 62983 - 63113
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctatt 187  Q
    |||||||||| ||||||||||||||| |  || ||| |||| |||||||||||||  |||||||| |||||||||||| |||||||| |  | |||||||    
T  62983 attttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccctatt 63081  T
Q  188 ttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||| |||||| |||| ||||| |||||    
T  63082 tccaactcaagaaacgcacataaatgacagtt 63113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 5035903 - 5035977
Alignment:
Q  103 acgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat 177  Q
    |||||||||||| ||||| |||||||| |||||||| |||| |||||||||||| ||||||||| ||||| ||||    
T  5035903 acgaaaatggtcctgtcttttttaaatcgaacaaaaccgtccctaaactatcatattttttgcagttttaatcat 5035977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 16952961 - 16953093
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg--ttttttgcaattttagtcat-gcccccta 185  Q
    |||||||||| ||||||||||| ||| | ||| |||||||| |||||||||||||  |||||||| |||  ||||||||  ||||||||||  | |||||    
T  16952961 attttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttttgcggttttagtcatatctcccta 16953059  T
Q  186 ttttcaactccagaaacacacagaaatggcagtt 219  Q
    ||| |||||| |||||| |||||||||| |||||    
T  16953060 tttccaactctagaaacgcacagaaatgacagtt 16953093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 17060932 - 17061064
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg--ttttttgcaattttagtcat-gcccccta 185  Q
    |||||||||| ||||||||||| ||| | ||| |||||||| |||||||||||||  |||||||| |||  ||||||||  ||||||||||  | |||||    
T  17060932 attttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttttgcggttttagtcatatctcccta 17061030  T
Q  186 ttttcaactccagaaacacacagaaatggcagtt 219  Q
    ||| |||||| |||||| |||||||||| |||||    
T  17061031 tttccaactctagaaacgcacagaaatgacagtt 17061064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 175
Target Start/End: Complemental strand, 4809422 - 4809314
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   |||||||| | ||||||||||||||| | | | |||||||||||||||| |||||  |||||||| |||||||||||    
T  4809422 ttaattacacttttggtcctaccattttgactaactcacgaaaatggtcctatgttttttaaattgaacaaagtcgtccttaaactat-atgttttttgc 4809324  T
Q  166 aattttagtc 175  Q
    | ||||||||    
T  4809323 agttttagtc 4809314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 20127739 - 20127887
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| |||||   ||||||||||  |||||||||||||| | ||| |||||||| |||||||||||||  |||||||| ||| |||||||    
T  20127739 ttaattacacttttggtcctaccattttgaccaattcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttg 20127837  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatg 213  Q
    || |||||||| |  | |||||||| |||| |||||||| |||| |||||    
T  20127838 cagttttagtcctatctccctatttccaaccccagaaacgcacaaaaatg 20127887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 6949477 - 6949608
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgcaattttagtcat-gccccctat 186  Q
    |||||||| | ||||||||||||||| | ||| |||||||| |||||||||||||  | |||||| ||| ||||||||| |||||||| |  | ||||||    
T  6949477 attttgactaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctttaactat-atgtttttttgcagttttagtcctatctccctat 6949575  T
Q  187 tttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| |||| |||||||||| |||||    
T  6949576 ttccaactccataaacgcacagaaatgacagtt 6949608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 6949987 - 6949900
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactat 153  Q
    |||||| ||||||| ||||| | |||||||||| ||||||||| ||||| |   |||||||||| ||||||||||||| |||||||||    
T  6949987 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacatcttttaaatagaacaaaatcgtccctaaactat 6949900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 25336143 - 25336032
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | |||||||||| ||||||||| ||||| |   |||||||||| ||||||||||||| ||||| |||    ||||||||    
T  25336143 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacttcttttaaatcgaacaaaatcgtccctaaattatatatttttttgc 25336044  T
Q  166 aattttagtcat 177  Q
    | ||||||||||    
T  25336043 agttttagtcat 25336032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 5561023 - 5560940
Alignment:
Q  136 aaatcgtcactaaactatcatgttttttgcaattttagtcatgcc-ccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||||||| ||||||||| |||||||||||| |||||||| |  | |||||||| ||||||||||||| |||||||||| |||||    
T  5561023 aaatcgtccctaaactat-atgttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtt 5560940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 212
Target Start/End: Complemental strand, 15551221 - 15551071
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-tttt 161  Q
    ||||||||| ||||||| | |||   |||||||||| ||||| ||||||||||| | | |||||||| |||||||||||||  |||  ||| ||| ||||    
T  15551221 ggtttaattacacttttggccctaccattttgaccaactcacaaaaatggtcatatattttttaaatcgaacaaaatcgtccttaagttat-atgttttt 15551123  T
Q  162 ttgcaattttagtcat-gccccctattttcaactccagaaacacacagaaat 212  Q
    ||||| |||||||| |  | |||||||| ||||||||||||| |||| ||||    
T  15551122 ttgcagttttagtcctatctccctatttccaactccagaaacgcacataaat 15551071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 44219647 - 44219800
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   ||||||| || ||||| |||||| || |  || |||||||| ||||||||| |||  |||| ||| |||||||||||    
T  44219647 ttaattacacttttggtccttccattttgatcaactcacaaaaatgatcctaccttttttaaatcgaacaaaattgtccttaaattat-atgttttttgc 44219745  T
Q  166 aattttagtcatgcc-ccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |||| ||| ||||||||||||| |||||||||| |||||    
T  44219746 agttttagtcctatctccctgtttccaactccagaaacgcacagaaatgacagtt 44219800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 649880 - 649803
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtc 143  Q
    |||||| ||||||| |||||   |||||||||| ||||||||||||||| | | | |||||||| |||||||||||||    
T  649880 ttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtc 649803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 239887 - 239740
Alignment:
Q  73 cacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaatttta 172  Q
    ||||||| |||||||| ||||| ||  ||||||||| ||||| || |  ||| |||  ||||||||| |||  | || |||||| ||| ||||  ||||     
T  239887 cacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcgtttttc 239788  T
Q  173 gtcatgccccctattttcaa-ctccagaaacacacagaaatggcagtt 219  Q
    ||||| || ||||||||||| |||||||||| || |||||||||||||    
T  239787 gtcatacctcctattttcaaactccagaaacgcagagaaatggcagtt 239740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 24140217 - 24140130
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactat 153  Q
    |||||| |||||||  |||||| || ||||||| ||||||||||||||| |  || ||||||||  ||||||||||||  ||||||||    
T  24140217 ttaattacacttttgttcctcgcatcttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccataaactat 24140130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 18450833 - 18450987
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||||| ||||| ||  ||||||||| |||||  | |  ||| |||  ||||||||  |||  | || |||||| ||||||||    
T  18450833 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttttttgc 18450932  T
Q  166 aattttagtcatgccccctattttc-aactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| | || ||||||||| |||||||||||| || ||||||| |||||    
T  18450933 atttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagtt 18450987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 28617156 - 28617002
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||||| ||||| ||  ||||||||| ||||  ||||  ||| |||  ||||||||| |||  | || |||||| ||| ||||    
T  28617156 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 28617057  T
Q  166 aattttagtcatgccccctattttc-aactccagaaacacacagaaatggcagtt 219  Q
    | |||| ||| | || ||||||||| |||||||||||| || |||||| ||||||    
T  28617056 atttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagtt 28617002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 63 - 192
Target Start/End: Original strand, 35163184 - 35163312
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||||||| |||| ||||||||||||||||||    
T  35163184 ggtttaattacacttttagtcctcgcattttgaccagctcacaaaaatggtcttgtctctttcaaatcgaacaaaaccgtc-ctaaactatcatgttttt 35163282  T
Q  163 tgcaattttagtcatgccccctattttcaa 192  Q
    |||| |||||||| | || |||||||||||    
T  35163283 tgcagttttagtcctacctcctattttcaa 35163312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 66 - 213
Target Start/End: Complemental strand, 31574268 - 31574121
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | |||||||||| ||||||||| | |||||  ||||||||||| ||||||||||||| ||||||||| |||||||||||    
T  31574268 ttaattacacttttggtccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgc 31574170  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatg 213  Q
    | ||||||||||  | |||||||||||||||||||||| |||| |||||    
T  31574169 agttttagtcatatctccctattttcaactccagaaacgcacataaatg 31574121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 31073685 - 31073532
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | |||||||||||||||||||| |||||||  ||||||||||| ||||||||| ||| ||||||||| ||||||| |||    
T  31073685 ttaattacacttttggtccttgcattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaattgtccctaaactat-atgttttgtgc 31073587  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |||||||| ||||||||||||| |||||||||| |||||    
T  31073586 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtt 31073532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 66 - 209
Target Start/End: Complemental strand, 33096154 - 33096007
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatc----gtcactaaactatcatgtttt 161  Q
    ||||||||||||||  || ||| ||||| ||||||||| |||||||||||||||||||| |||| |||||||| |    |||  ||||||||||||||||    
T  33096154 ttaattgcacttttgttcttcgcatttttaccagctcatgaaaatggtcatgtctctttcaaatcgaacaaaaccaactgtccttaaactatcatgtttt 33096055  T
Q  162 ttgcaattttagtcatgccccctattttcaactccagaaacacacaga 209  Q
    |||||||||||||| | ||||||||||||| ||||| |||| ||||||    
T  33096054 ttgcaattttagtcctaccccctattttcacctccaaaaacgcacaga 33096007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 35163730 - 35163576
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg--tttttt 163  Q
    |||||| ||||||| |||| || |||||||||||||||||||||||||  || |||||| ||||  |||||||||||| ||||||||| |||  ||||||    
T  35163730 ttaattacacttttggtccccgcattttgaccagctcacgaaaatggttctgcctctttcaaatcaaacaaaatcgtccctaaactat-atgtttttttt 35163632  T
Q  164 gcaattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||| |||||||| | || |||||||||||||||| ||||||| ||||||| |||||    
T  35163631 gcagttttagtcctacctcctattttcaactccaaaaacacagagaaatgacagtt 35163576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 208
Target Start/End: Original strand, 33095717 - 33095859
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||||||||||| ||||||| ||||| | |||||| |||||||||||    |||||| |||| |||||||| |||| |||||||||||||||||||||    
T  33095717 ttaattgcacttttggtcctcgcatttttatcagctcgcgaaaatggtctcacctctttcaaatcgaacaaaaccgtccctaaactatcatgttttttgc 33095816  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacag 208  Q
    | |||||||| | || |||||||||| ||||| |||| |||||    
T  33095817 agttttagtcctacctcctattttcacctccaaaaacgcacag 33095859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 219
Target Start/End: Original strand, 25468849 - 25469007
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttt- 161  Q
    ||||||||| ||||||| |||||   |||||||||| ||||||||| ||||||| |||||||||||| ||||||||||||| ||||||||| |||||||     
T  25468849 ggtttaattacacttttggtccttacattttgaccaactcacgaaattggtcatatctcttttaaatcgaacaaaatcgtccctaaactat-atgttttt 25468947  T
Q  162 -ttgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
     ||||| |||||||| |  | ||||||||| || ||||||||| |||||||||| |||||    
T  25468948 cttgcagttttagtcctatctccctattttaaattccagaaacgcacagaaatgacagtt 25469007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 202
Target Start/End: Complemental strand, 32836539 - 32836404
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||||||||| | ||||||||||||||||||||||||||||| |||||| |||| |||||||| |||   |||||| | |||||||||||    
T  32836539 ttaattacacttttagtccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcttaaactgt-atgttttttgc 32836441  T
Q  166 aattttagtcatgccccctattttcaactccagaaac 202  Q
    | |||||||| | ||  |||||||||||| |||||||    
T  32836440 agttttagtcctaccttctattttcaacttcagaaac 32836404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 5114494 - 5114624
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctatt 187  Q
    ||||||| || ||||||||||||||| | ||| |||||||| |||||||||||||  |||||||| |||||||||||| |||||||| |  | |||||||    
T  5114494 attttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccctatt 5114592  T
Q  188 ttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||||||||||||||||||| |||||    
T  5114593 tccaactccagaaacacacagaaatgacagtt 5114624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 835397 - 835537
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||||||||||| ||||||  ||||| | |||||||||||||||||| || |||||| |||| ||||||||  ||| |||||||||||| ||||||||    
T  835397 ttaattgcacttttggtcctcacatttttagcagctcacgaaaatggtcttgcctctttcaaatcgaacaaaactgtccctaaactatcat-ttttttgc 835495  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacaca 207  Q
    |  ||||||| | ||||||||||||| ||||| |||| ||||    
T  835496 agctttagtcctaccccctattttcacctccaaaaacgcaca 835537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 5121012 - 5120859
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | |||||||||| ||||||||| |  || |  ||||||||||| ||||||||||||| ||||||||| |||||||||||    
T  5121012 ttaattacacttttggtccttgcattttgaccaactcacgaaattattcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgc 5120914  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |||||||| |||||||| |||| |||||||||| |||||    
T  5120913 agttttagtcctatctccctatttccaactccataaacgcacagaaatgacagtt 5120859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 25472533 - 25472402
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgcaattttagtcat-gccccctat 186  Q
    |||||||||| ||||||||||||||| | ||| |||||||| |||||||||||||  |||||||| ||| ||||||||| |||||||| |  | ||||||    
T  25472533 attttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttgcagttttagtcctatctccctat 25472435  T
Q  187 tttcaactccagaaacacacagaaatggcagtt 219  Q
    || || |||||||||| |||||||||| |||||    
T  25472434 ttccagctccagaaacgcacagaaatgacagtt 25472402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 219
Target Start/End: Original strand, 32836007 - 32836157
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| |||||||  |||| | |||||||||||||||| |||| |||| || |||||| |||| |||||||| |||| ||||||||||||||||      
T  32836007 ggtttaattacacttttgatccttgcattttgaccagctcacaaaaacggtcctgcctctttcaaatcgaacaaaaccgtc-ctaaactatcatgttt-- 32836103  T
Q  163 tgcaattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
       | |||||||  | || ||||||||||||||| |||||||| ||||||| |||||    
T  32836104 ---agttttagttctacctcctattttcaactcctgaaacacagagaaatgacagtt 32836157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 24640705 - 24640575
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctatt 187  Q
    ||||||| || ||||||||||||||| | ||| |||||||| |||||||||||||  |||||||| |||||||||||| |||||||| |  | |||||||    
T  24640705 attttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcttatctccctatt 24640607  T
Q  188 ttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||  |||| |||||||||| |||||    
T  24640606 tccaactccgaaaacgcacagaaatgacagtt 24640575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 29891566 - 29891476
Alignment:
Q  123 tttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcatgcc-ccctattttcaactccagaaacacacagaaatg 213  Q
    |||||||||||||||||||||  |||||||| |||||||||||| |||||||| |  | |||||||| ||||||||||||| ||||||||||    
T  29891566 tttaaattgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatg 29891476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 213
Target Start/End: Complemental strand, 30251235 - 30251087
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgt-tttttg 164  Q
    |||||| |||||||  ||||  ||||||||||| ||||| ||||| ||||| ||| |||||||| |||||||||||||  ||||||||  ||| ||||||    
T  30251235 ttaattacacttttgatcctactattttgaccaactcacaaaaattgtcatatcttttttaaatcgaacaaaatcgtccttaaactat-ttgtatttttg 30251137  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatg 213  Q
     | |||||||| |  | |||||||| ||||||||||||| ||||||||||    
T  30251136 tagttttagtcttatctccctatttccaactccagaaacgcacagaaatg 30251087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 138
Target Start/End: Original strand, 22534068 - 22534139
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaa 138  Q
    |||||| ||||||| |||| |||||||||| ||| ||| ||||||||||||||||||||||||| ||||||||    
T  22534068 ttaattacactttt-gtccccgtattttgatcagttcaagaaaatggtcatgtctcttttaaatcgaacaaaa 22534139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 219
Target Start/End: Original strand, 11523727 - 11523841
Alignment:
Q  106 aaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgcaattttagtcatgccccctattttcaactccagaaacac 204  Q
    |||||||| |||  ||||| ||||  ||||||| |||| ||||||||||||| ||||||||| |||||||| | || | |||||||||||||| |||| |    
T  11523727 aaaatggttatgcttctttcaaatcaaacaaaaccgtccctaaactatcatgtttttttgcagttttagtcctacctcatattttcaactccataaacgc 11523826  T
Q  205 acagaaatggcagtt 219  Q
    ||| |||| ||||||    
T  11523827 acaaaaattgcagtt 11523841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 136
Target Start/End: Complemental strand, 18297732 - 18297662
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaa 136  Q
    |||||| ||||||||||| ||| ||||| |||| ||||||||| ||||||| ||| |||||||||||||||    
T  18297732 ttaattacacttttagtcttcgaattttaaccaactcacgaaattggtcatctcttttttaaattgaacaa 18297662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 835768 - 835695
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaat 139  Q
    |||||||||||||| ||||||| ||||| | ||||| |||||||||||| || |||||| |||| |||||||||    
T  835768 ttaattgcacttttggtcctcgcatttttagcagcttacgaaaatggtcctgcctctttcaaatcgaacaaaat 835695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 22534267 - 22534219
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtc 114  Q
    |||||| ||||||| |||||||||||||||||| |||||||||||||||    
T  22534267 ttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtc 22534219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 197
Target Start/End: Original strand, 28636295 - 28636425
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| || |||| ||| | |||||||||||| ||||||||| ||||| |   |||||||||| ||||||||||||  ||||||||| ||| |||||||    
T  28636295 ttaattacatttttggtcattgtattttgaccaactcacgaaattggtcttacttcttttaaatcgaacaaaatcgttcctaaactat-atg-tttttgc 28636392  T
Q  166 aattttagtcat-gccccctattttcaactcca 197  Q
    | ||||||||||  | |||||||| ||||||||    
T  28636393 agttttagtcatatctccctatttccaactcca 28636425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 28636669 - 28636586
Alignment:
Q  136 aaatcgtcactaaactatcatgttttttgcaattttagtcatgcc-ccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||||||||  |||||||| |||||||||||| |||||||| |  | |||||||| ||||||||||||| |||||||||| |||||    
T  28636669 aaatcgtccttaaactat-atgttttttgcagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagtt 28636586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 162
Target Start/End: Original strand, 31242806 - 31242905
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| |||||||   ||||| |||||||||| |||||||||||| || || || |||||||| ||||| ||  ||| | |||||||||| |||||    
T  31242806 ggtttaattacacttttgaccctcgcattttgaccaactcacgaaaatgatcctgccttttttaaatcgaacataactgtccccaaactatcatattttt 31242905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 31470318 - 31470472
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaatt-gaacaaaatcgtcactaaactatcatgttttttg 164  Q
    |||||| |||||||  ||||||| ||||| ||  ||||||||| |||||||| ||||||||||   ||||||||  |||| | || ||| || ||| |||    
T  31470318 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatg-ctcttttaaaacagaacaaaacagtcattcaattattatttttgttg 31470416  T
Q  165 caattttagtcatgccccctattttcaa-ctccagaaacacacagaaatggcagtt 219  Q
    || |||| ||| | || ||||||||||| |||||||||| || |||||||||||||    
T  31470417 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtt 31470472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 139
Target Start/End: Complemental strand, 3835271 - 3835195
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaat 139  Q
    ||||||||| ||||||| ||||  || ||||||||  ||||||||||||||| || |||||| |||  |||||||||    
T  3835271 ggtttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaat 3835195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 29033437 - 29033485
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtc 114  Q
    |||||| ||||||| |||||||||||||| || |||||||||| |||||    
T  29033437 ttaattacacttttggtcctcgtattttggcctgctcacgaaattggtc 29033485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 31073146 - 31073222
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgt 142  Q
    |||||| ||||||| |||||   |||||||||| | || |||||||||| | ||| |||||||| ||||||||||||    
T  31073146 ttaattacacttttggtcctttaattttgaccaacacatgaaaatggtcctatcttttttaaatcgaacaaaatcgt 31073222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 63 - 202
Target Start/End: Complemental strand, 40160636 - 40160498
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| || |||| ||||| | |||||||||| ||||||||||| |||||| |||||| ||||||||||||| |||| ||||||||||||||||||    
T  40160636 ggtttaattacatttttggtccttgcattttgaccaactcacgaaaatagtcatgcctctttcaaattgaacaaaaccgtc-ctaaactatcatgttttt 40160538  T
Q  163 tgcaattttagtcatgccccctattttcaactccagaaac 202  Q
    |||| |||||||| | || |||||||||||||||||||||    
T  40160537 tgcagttttagtcttacctcctattttcaactccagaaac 40160498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 63 - 207
Target Start/End: Original strand, 229161 - 229305
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| ||||||| |||||||||||||||||||||| ||||||||||| || |||||| ||||||||||||||||||  |||||||||||| ||||    
T  229161 ggtttaattacacttttggtcctcgtattttgaccagctcgcgaaaatggtcttgcctctttcaaattgaacaaaatcgtccttaaactatcatg-tttt 229259  T
Q  163 tgcaattttagtcatgc-cccctattttcaactccagaaacacaca 207  Q
    |||| |||||||  | | ||| |||||||||||||| |||| ||||    
T  229260 tgcagttttagttctactcccttattttcaactccataaacgcaca 229305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 66 - 175
Target Start/End: Original strand, 23986523 - 23986632
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||  |||||||||||||||||||||||||||||||||||| |||| ||||||||  ||| |||||||||||||||||||||    
T  23986523 ttaatttcacttttggtcctcacattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaactgtccctaaactatcatgttttttgc 23986622  T
Q  166 aattttagtc 175  Q
    | ||||||||    
T  23986623 agttttagtc 23986632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 66 - 202
Target Start/End: Complemental strand, 51310048 - 51309912
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||||||||||| ||||||| ||||| ||||||||||||||||||||||| |||||| |||| ||||||||  ||| ||||||||||||||||||| |    
T  51310048 ttaattgcacttttggtcctcgcatttttaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaacagtccctaaactatcatgttttttac 51309949  T
Q  166 aattttagtcatgccccctattttcaactccagaaac 202  Q
      ||||||||||  || ||||||||| ||||| ||||    
T  51309948 ggttttagtcatagcctctattttcacctccaaaaac 51309912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 24336306 - 24336155
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| |||||||  |||||| |||||||| ||||||||||||||||| || |||||| |||| |||||||| |||  ||||| |||||||||||||||    
T  24336306 ttaattacacttttgatcctcgcattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgttcctaaattatcatgttttttgc 24336207  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatggcag 217  Q
      |||||||| | |||| |||||||||||||||||||  | |||||||||||    
T  24336206 tcttttagtcctaccccatattttcaactccagaaacgtatagaaatggcag 24336155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 17503992 - 17504129
Alignment:
Q  81 gtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcatgcc 180  Q
    ||||||| |||||||||| ||||||||||||||| || |||||| |||| ||||| || |||| |||||||||||||||||||||| |||||||| | ||    
T  17503992 gtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtc-ctaaactatcatgttttttgcagttttagtcctacc 17504090  T
Q  181 ccctattttcaactccagaaacacacagaaatggcagtt 219  Q
     |||||||||||||||||||||  | ||||||| |||||    
T  17504091 tcctattttcaactccagaaacgtagagaaatgacagtt 17504129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 24335787 - 24335917
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcatgccccctattt 188  Q
    ||||||||||||||||||||||||||||| |||||| |||| |||||||| |||  || ||||||||||||||||| | |||||||| | | ||||||||    
T  24335787 attttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtatctgaactatcatgttttttggagttttagtcctacaccctattt 24335886  T
Q  189 tcaactccagaaacacacagaaatggcagtt 219  Q
    ||||||||| |||| |||| ||||| |||||    
T  24335887 tcaactccaaaaacgcacataaatgacagtt 24335917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 63 - 210
Target Start/End: Complemental strand, 229705 - 229558
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| ||||||| ||| ||| |||||||||||||||||||||||||| || |||||| ||||  ||||||||||||  ||||||||||||| |||    
T  229705 ggtttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgcctctttcaaatcaaacaaaatcgtccttaaactatcatgt-ttt 229607  T
Q  163 tgcaattttagtcatgcc-ccctattttcaactccagaaacacacagaa 210  Q
    |||| ||||| || | || || ||||||||||||||||||| |||||||    
T  229606 tgcagttttaatcctacctccttattttcaactccagaaacgcacagaa 229558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 219
Target Start/End: Original strand, 14439829 - 14439984
Alignment:
Q  64 gtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt 163  Q
    |||||||| || |||| ||||| | |||||||||| ||||||||| |||||||  || ||||||||| |||||||||||| ||||||||| |||||||||    
T  14439829 gtttaattacatttttggtccttgcattttgaccaactcacgaaattggtcataccttttttaaattaaacaaaatcgtccctaaactat-atgtttttt 14439927  T
Q  164 gcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||| |||||||| |  | |||||||| ||||||||||||| |||||||||| |||||    
T  14439928 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtt 14439984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 12593027 - 12593180
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   | |||||||| |||||||||||||||||  || |||||||| |||||||||||||  |||||||| |||||||||||    
T  12593027 ttaattacacttttggtcctaccagtttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 12593125  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||||||| || |  | |||||||||||||||||||||| |||||||||| |||||    
T  12593126 aattttaatcctatctccctattttcaactccagaaacgcacagaaatgacagtt 12593180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 12593566 - 12593413
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | |||||||||| ||||||||| |||||||  ||||||||||| |||||||||||||  |||||||| || ||||||||    
T  12593566 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtctgtaaactat-atattttttgc 12593468  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |||||||||||||||||||||| ||||| |||| |||||    
T  12593467 agttttagtcctatctccctattttcaactccagaaacgcacaggaatgacagtt 12593413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 35193326 - 35193463
Alignment:
Q  81 gtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcatgcc 180  Q
    ||||||| ||||||| |||||||||||||||||| |  |||||| |||| ||||||||||||| ||||||||| |||||||||||| |||||||| |  |    
T  35193326 gtcctcgcattttgatcagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagtcctatc 35193424  T
Q  181 ccctattttcaactccagaaacacacagaaatggcagtt 219  Q
     ||||||||||||| ||||||| || ||||||| |||||    
T  35193425 tcctattttcaacttcagaaacgcagagaaatgacagtt 35193463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 46737198 - 46737045
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | |||||||||| ||||||||| ||||| |  ||||||||||| ||||||||||||| ||||||||| |||||||||||    
T  46737198 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgc 46737100  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||||||||||  |  ||||| | ||||||||||||| |||||||||| |||||    
T  46737099 agttttagtcatatcttcctatctccaactccagaaacgcacagaaatgacagtt 46737045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 35193845 - 35193694
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | |||||||  ||||||||||||||||| || |||||| ||||  ||||||| |||| ||||||||||||||||||||     
T  35193845 ttaattacacttttggtccttgcattttgataagctcacgaaaatggtcctgcctctttcaaatctaacaaaaccgtc-ctaaactatcatgttttttga 35193747  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
      |||||||||| || ||||||||||||||||||||| || || ||||||||||    
T  35193746 tgttttagtcatacctcctattttcaactccagaaacgcagag-aatggcagtt 35193694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 28465084 - 28465237
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| |||||||||||||   |||||||||| || |||||| || || |  ||||||||||| |||||||||||||  |||||||| |||||||||||    
T  28465084 ttaattacacttttagtccttccattttgaccaacttacgaaattgatcctacctcttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 28465182  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||||||||||  | |||||||||||||||||||||| |||| ||||| |||||    
T  28465183 agttttagtcatatctccctattttcaactccagaaacgcacataaatgacagtt 28465237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 28465624 - 28465471
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   |||||||||| ||||||||||||||| | ||| |||||||| |||||||||||||  |||||||| |||||||||||    
T  28465624 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 28465526  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||||||||| |  | |||||||| |||||||| |||| |||| |||| ||||||    
T  28465525 aattttagtcctatctccctatttccaactccataaacgcacataaatagcagtt 28465471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 89 - 195
Target Start/End: Original strand, 40160120 - 40160225
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcatgccccctattt 188  Q
    ||||| |||||||||||||||| |||||| ||||||||||| |||||||| |||| ||||||||| |||||||||||| |||||||| | || |||||||    
T  40160120 attttaaccagctcacgaaaatagtcatgcctcttttaaatcgaacaaaaccgtccctaaactat-atgttttttgcagttttagtcctacctcctattt 40160218  T
Q  189 tcaactc 195  Q
    |||||||    
T  40160219 tcaactc 40160225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 54440574 - 54440725
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | |||||||||| ||||||||| ||||| |  ||||||||||| ||||||||||||| |||||||   |||||||||||    
T  54440574 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact---atgttttttgc 54440670  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |||||||||||||| ||||||  |||||||||| |||||    
T  54440671 agttttagtcctatctccctattttcaacttcagaaatgcacagaaatgacagtt 54440725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 17504479 - 17504349
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcatgcccccta-tt 187  Q
    ||||||| |||||||||||||||||| | |||||||||||| |||||||| ||||  |||||||| ||||||||||||||||||||  | || |||| ||    
T  17504479 attttgaacagctcacgaaaatggtcctatctcttttaaatcgaacaaaaccgtccttaaactat-atgttttttgcaattttagtactacctcctattt 17504381  T
Q  188 ttcaactccagaaacacacagaaatggcagtt 219  Q
    |||||||| |||||| || ||||||| |||||    
T  17504380 ttcaactctagaaacgcagagaaatgacagtt 17504349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 55677501 - 55677347
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| ||||| |||||||||||| ||||||||| ||||| |  ||||||||||| ||||||||||||| ||||||||| ||| ||||||     
T  55677501 ttaattacacttttggtccttgtattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaactat-atgttttttta 55677403  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||||||||||| |  | |||||||| |||||||| |||| |||| ||||| |||||    
T  55677402 caattttagtcctatctccctatttccaactccataaacgcacataaatgacagtt 55677347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 21034780 - 21034626
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| || |||| ||||| | |||||||||| ||||||||| ||||| | |||||||||||| ||||||||||||| || ||||||  | ||||||||    
T  21034780 ttaattacaattttggtccttgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgtccctgaactatatttttttttgc 21034681  T
Q  166 aattttag-tcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||| ||   | |||||||| |||||||||||||||||| ||||| |||||    
T  21034680 agttttagttctatctccctatttccaactccagaaacacacaaaaatgacagtt 21034626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 202
Target Start/End: Complemental strand, 54441112 - 54440976
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   ||||||| |||||||||||||||||| | ||| |||||||| |||||||||||||  |||||||| |||||||||||    
T  54441112 ttaattacacttttggtcctaccattttgatcagctcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 54441014  T
Q  166 aattttagtcat-gccccctattttcaactccagaaac 202  Q
    | |||||||| |  | |||||||| |||||||||||||    
T  54441013 agttttagtcctatctccctatttccaactccagaaac 54440976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 34789385 - 34789532
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   |||||||||| ||||||||||||||| | ||| |||||||| |||||||||||||  |||||||| |||||||||||    
T  34789385 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 34789483  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatg 213  Q
    | |||||||| |  | ||||||||  |||||||||||| |||| |||||    
T  34789484 agttttagtcctatctccctatttcaaactccagaaacgcacataaatg 34789532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 14440348 - 14440218
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctatt 187  Q
    |||||||||| || |||||||||||| | ||| |||||||| |||||||||| ||  |||||||| |||||||||||| ||||||||||  | |||||||    
T  14440348 attttgaccaacttacgaaaatggtcctatcttttttaaatcgaacaaaatcatccttaaactat-atgttttttgcagttttagtcatatctccctatt 14440250  T
Q  188 ttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||| |||||| |||||||||| |||||    
T  14440249 tccaactctagaaacgcacagaaatgacagtt 14440218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 56077844 - 56077714
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctatt 187  Q
    |||||||||| ||||||||||||||| | ||| |||||||| |||||||||||||  |||||||| |||||||||||| |||||||| |  | |||||||    
T  56077844 attttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccctatt 56077746  T
Q  188 ttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||| |||||| |||| ||||| |||||    
T  56077745 tccaactctagaaacgcacaaaaatgacagtt 56077714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 73 - 175
Target Start/End: Original strand, 45838557 - 45838658
Alignment:
Q  73 cacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaatttta 172  Q
    ||||||| ||||| |||||||||||| |||||| || ||||| |  ||||||||||| ||||||||||||| ||||||||| |||||||||||| |||||    
T  45838557 cacttttggtccttgtattttgaccaactcacgtaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcagtttta 45838655  T
Q  173 gtc 175  Q
    |||    
T  45838656 gtc 45838658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 218
Target Start/End: Original strand, 33689832 - 33689983
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | |||||||||| ||||| ||| ||||| |  ||||||||||| |||||||||||||  |||||||| ||| |||||||    
T  33689832 ttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactat-atg-tttttgc 33689929  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagt 218  Q
    | ||||||||||  | |||||||| ||||||||||||| |||| ||||| ||||    
T  33689930 agttttagtcatatctccctatttacaactccagaaacgcacataaatgacagt 33689983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 219
Target Start/End: Complemental strand, 18965645 - 18965526
Alignment:
Q  100 ctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcatgc-cccctattttcaactccag 198  Q
    ||||| |||||||||||| || |||| | ||||||||||||||  |||||||||||||| ||||| | |||||||||| | ||||||||||||||||||     
T  18965645 ctcacaaaaatggtcatgccttttttgatttgaacaaaatcgttcctaaactatcatgt-ttttgtagttttagtcatactcccctattttcaactccat 18965547  T
Q  199 aaacacacagaaatggcagtt 219  Q
    |||| |||| ||||| |||||    
T  18965546 aaacgcacataaatgacagtt 18965526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 219
Target Start/End: Original strand, 46736680 - 46736811
Alignment:
Q  88 tattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctat 186  Q
    ||||||||||| ||||||||||||||| | | | |||||||| ||||||||| |||  |||||||| ||||||||||||  |||| || |  | ||||||    
T  46736680 tattttgaccaactcacgaaaatggtcttattttttttaaatcgaacaaaattgtccttaaactat-atgttttttgcagatttaatcctatctccctat 46736778  T
Q  187 tttcaactccagaaacacacagaaatggcagtt 219  Q
    |||||||||||||||| |||||||||| |||||    
T  46736779 tttcaactccagaaacgcacagaaatgacagtt 46736811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 19528872 - 19529026
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| ||||| | ||||||||||  |||||||| ||||| |  ||||||||||| ||| ||||||||| ||||||||| ||| |||||||    
T  19528872 ttaattacacttttggtccttgcattttgaccaattcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactat-atgtttttttg 19528970  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| |  | |||||||| ||||||| ||||| |||||||||| |||||    
T  19528971 cagttttagtcctatctccctatttccaactccggaaacgcacagaaatgacagtt 19529026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 21034238 - 21034392
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| |||||   |||||||||| ||||||||||||||| | ||| |||||||| |||||||||||||  |||||||| ||| ||||||     
T  21034238 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttta 21034336  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || ||||||||||  | |||||||| |||||||| |||| |||| ||||| |||||    
T  21034337 cagttttagtcatatctccctatttccaactccataaacgcacataaatgacagtt 21034392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 26974286 - 26974440
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttg- 164  Q
    |||||| ||||||| |||||   ||||| || | ||||||||||||||||| ||| |||||||| |||||||||||||  |||||||| |||||||||      
T  26974286 ttaattacacttttggtcctaccattttaacaaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttta 26974384  T
Q  165 caattttagtcatgcc-ccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| |  | |||||||| ||||||||||||| |||||||||| |||||    
T  26974385 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtt 26974440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 213
Target Start/End: Original strand, 28166004 - 28166154
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    |||||||||  | |||| |||||  ||||||||||| ||||||||||||||| | ||| |||||||| ||||||||| |||  |||||||| || |||||    
T  28166004 ggtttaattaaatttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-attttttt 28166102  T
Q  163 tgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatg 213  Q
    |||| |||||||| |  | |||||||||||||| || |||| ||||||||||    
T  28166103 tgcagttttagtcctatctccctattttcaactacaaaaacgcacagaaatg 28166154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 34789926 - 34789772
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| ||||| | |||||||||| ||||||||| ||||| |  ||||||||||| ||||||||| ||| ||||||||| ||| |||||||    
T  34789926 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactat-atgtttttttg 34789828  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| |  | |||||||| |||||||| |||| |||| ||||| |||||    
T  34789827 cagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagtt 34789772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 34807119 - 34807273
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| ||||| | ||||||| || ||||||||| |||||||  ||||||||||| ||||||||||||| ||||| ||| ||| |||||||    
T  34807119 ttaattacacttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtat-atgtttttttg 34807217  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| |  | || ||||| ||||||||||||| |||| ||||| |||||    
T  34807218 cagttttagtcctatctccatatttccaactccagaaacgcacataaatgacagtt 34807273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 219
Target Start/End: Complemental strand, 45839095 - 45838937
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg---tt 159  Q
    ||||||||| ||||||| |||||  ||||||||||| |||||| |||||||| | ||| |||||||| |||||||||||||  |||||||| |||   ||    
T  45839095 ggtttaattacacttttggtcctactattttgaccaactcacg-aaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 45838998  T
Q  160 ttttgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||||||| |||||||| |  |  ||||||| ||||||||||||| |||||||||| |||||    
T  45838997 ttttgcagttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagtt 45838937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 213
Target Start/End: Complemental strand, 24852001 - 24851861
Alignment:
Q  74 acttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgcaatttta 172  Q
    |||||| ||||| | |||||||||| ||||||||| || || |  ||||||||||| ||||||||||||| ||||||||| ||| ||||||||| |||||    
T  24852001 acttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttgcagtttta 24851903  T
Q  173 gtcat-gccccctattttcaactccagaaacacacagaaatg 213  Q
    ||| |  |   |||||| ||||||||||||| ||||||||||    
T  24851902 gtcctatctttctatttccaactccagaaacgcacagaaatg 24851861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 172
Target Start/End: Original strand, 33777632 - 33777740
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| |||||||  ||||   |||||||||| |||||||||||| |||| | | ||| |||| |||||||||||||  |||||||| ||||||||    
T  33777632 ggtttaattacacttttgttcctaccattttgaccaactcacgaaaatgatcatatttttttaaaatcgaacaaaatcgtccttaaactat-atgttttt 33777730  T
Q  163 tgcaatttta 172  Q
    ||||||||||    
T  33777731 tgcaatttta 33777740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 51309670 - 51309767
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt 163  Q
    ||||||| |||||| ||||||||||||| |  |||||||||||||| |||||  ||||| |||| ||||||||  ||| ||||| |||||||||||||    
T  51309670 ttaattgtacttttggtcctcgtatttttattagctcacgaaaatgatcatgcgtctttcaaatcgaacaaaactgtccctaaattatcatgtttttt 51309767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 30598055 - 30597979
Alignment:
Q  73 cacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaa 149  Q
    ||||||| |||||||| ||||||||| |||||| || ||||  |||||||||||||| ||||||||||||| |||||    
T  30598055 cacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatcgaacaaaatcgtccctaaa 30597979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 171
Target Start/End: Complemental strand, 31297235 - 31297127
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    |||| |||||||||||| || |||||||||  |||| ||||||||| |||||||| || |||||||| ||||||| | | | |||  ||||| |||||||    
T  31297235 ggttaaattgcacttttggttctcgtatttaaaccaactcacgaaattggtcatgccttttttaaatcgaacaaagttgcccctatgctatcttgttttt 31297136  T
Q  163 tgcaatttt 171  Q
    |||||||||    
T  31297135 tgcaatttt 31297127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 213
Target Start/End: Complemental strand, 16215040 - 16214891
Alignment:
Q  64 gtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt 163  Q
    ||||||||  |||||| |||||   ||||||| || || ||||||||| |||| ||| |||||||||||| |||||||||  |||||||| || ||||||    
T  16215040 gtttaattatacttttggtcctatcattttgatcaacttacgaaaatgatcatatcttttttaaattgaataaaatcgtccttaaactat-atatttttt 16214942  T
Q  164 gcaatttt-agtcatgccccctattttcaactccagaaacacacagaaatg 213  Q
    ||| |||| | ||   |  |||||||||||||||||||||||||| |||||    
T  16214941 gcagttttaattctatcttcctattttcaactccagaaacacacataaatg 16214891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 136
Target Start/End: Original strand, 44219378 - 44219448
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaa 136  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||||| | ||| |||||||||||||||    
T  44219378 ttaattacacttttggtcctcgtattttaaccaactcacgaaattggtcctctcttttttaaattgaacaa 44219448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 151
Target Start/End: Complemental strand, 10795854 - 10795769
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaact 151  Q
    |||||| |||||||  ||| || ||||||| |||||||||||| ||||| | ||||||| |||| ||||||||||||| |||||||    
T  10795854 ttaattacacttttgatccccgcattttgaacagctcacgaaattggtcctctctctttcaaatcgaacaaaatcgtctctaaact 10795769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 219
Target Start/End: Original strand, 18965177 - 18965296
Alignment:
Q  100 ctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcatgcc-ccctattttcaactccag 198  Q
    |||||||||| |||| || |||||| |||| |||||||||||||  |||||||||||| |||||||| |||||||  | || || |||||||||||| ||    
T  18965177 ctcacgaaaacggtcttgcctctttcaaatcgaacaaaatcgtccttaaactatcatg-tttttgcagttttagttctacctccttattttcaactctag 18965275  T
Q  199 aaacacacagaaatggcagtt 219  Q
    |||| || | ||||| |||||    
T  18965276 aaacgcatataaatgacagtt 18965296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 24851342 - 24851406
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactat 153  Q
    |||||||||| ||||||||||||||  | ||| ||||||||||||||||||||||  ||||||||    
T  24851342 attttgaccaactcacgaaaatggtgctatcttttttaaattgaacaaaatcgtccttaaactat 24851406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 143
Target Start/End: Original strand, 41608374 - 41608454
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtc 143  Q
    ||||||||| ||||||| ||||| | ||||||| || |||| |||| |||||||  ||||||||||| |||||||||||||    
T  41608374 ggtttaattacacttttggtccttgcattttgatcaactcatgaaattggtcatacctcttttaaatcgaacaaaatcgtc 41608454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 219
Target Start/End: Original strand, 6616672 - 6616829
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-tttt 161  Q
    ||||||||| ||||||| || ||   ||||||| || ||||||||||||||| | | | |||||||| |||||||||||||  |||||||| ||| ||||    
T  6616672 ggtttaattacacttttggttctatcattttgatcaactcacgaaaatggtcttattttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 6616770  T
Q  162 ttgcaattttagtcatgcc-ccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||||  | |||||| | || | |||||| ||||||||||||| |||| ||||| |||||    
T  6616771 ttgctgtgttagtcctacctctctatttccaactccagaaacgcacataaatgacagtt 6616829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 175
Target Start/End: Complemental strand, 6617182 - 6617097
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtc 175  Q
    |||||||| | ||||||||| ||||| |  ||||||||||| ||| ||||||||| ||||||||| || ||||||||| ||||||||    
T  6617182 attttgactaactcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactat-attttttttgcagttttagtc 6617097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 35643581 - 35643654
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt 163  Q
    |||||||||| ||||||||||||||| | ||| ||| |||||||| |||||||||  |||||||| |||||||||    
T  35643581 attttgaccaactcacgaaaatggtcctatctttttaaaattgaataaaatcgtccttaaactat-atgtttttt 35643654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 20958401 - 20958353
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtc 114  Q
    |||||| |||||||||||||||||||||| ||  |||||||||||||||    
T  20958401 ttaattacacttttagtcctcgtattttggcctactcacgaaaatggtc 20958353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 143
Target Start/End: Original strand, 36168329 - 36168409
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtc 143  Q
    ||||||||| |||||||  |||| | |||||||||| | ||||||| ||||| |  ||||||||||| |||||||||||||    
T  36168329 ggtttaattacacttttgctccttgcattttgaccaacccacgaaattggtcttacctcttttaaatcgaacaaaatcgtc 36168409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 25938213 - 25938059
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| || ||||| ||  ||||||||| ||||| || |  ||| |||  ||||||||  |||  | || |||||| ||| ||||    
T  25938213 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttgttgc 25938114  T
Q  166 aattttagtcatgccccctattttcaa-ctccagaaacacacagaaatggcagtt 219  Q
    | |||| ||| | || ||||||||||| ||||||||||||| |||||||||||||    
T  25938113 attttttgtcctacctcctattttcaaactccagaaacacaaagaaatggcagtt 25938059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 19529185 - 19529141
Alignment:
Q  118 tctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt 163  Q
    ||||||||||||||||||||||||||  |||||||| |||||||||    
T  19529185 tctcttttaaattgaacaaaatcgtctttaaactat-atgtttttt 19529141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 26974753 - 26974677
Alignment:
Q  101 tcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgcaattttagtcat 177  Q
    |||||||| ||||| |  ||||||||||| ||||||||| ||| ||||||||| ||| ||||||||| ||||||||||    
T  26974753 tcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactat-atgtttttttgcagttttagtcat 26974677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 219
Target Start/End: Complemental strand, 34807660 - 34807529
Alignment:
Q  88 tattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctat 186  Q
    |||||||| || |||||||||||  |  | ||| |||||| | |||||||||||||  |||||||| |||||||| ||| |||||||| |  | ||||||    
T  34807660 tattttgatcaactcacgaaaattattctatcttttttaattcgaacaaaatcgtccttaaactat-atgtttttggcagttttagtcctatctccctat 34807562  T
Q  187 tttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| |||| || ||||||| |||||    
T  34807561 ttccaactccataaacgcatagaaatgacagtt 34807529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 41608958 - 41608882
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgt 142  Q
    |||||| ||||||| |||||   |||||||||| ||||||||| ||||| |  |||||||||||  |||||||||||    
T  41608958 ttaattacacttttggtcctaccattttgaccaactcacgaaattggtcctacctcttttaaatccaacaaaatcgt 41608882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 34595315 - 34595162
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||  |||||||||| ||||||||||||||| ||  |||||||||| ||||||||||||| |||||||||||||| ||||||    
T  34595315 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatcgaacaaaatcgtccctaaactatcatgt-ttttgc 34595217  T
Q  166 aattttagtcatgccccc-tattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||  | ||||| ||||||||||||||||||| |||||||||| |||||    
T  34595216 agttttagtgctacccccttattttcaactccagaaacgcacagaaatgacagtt 34595162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 64 - 219
Target Start/End: Original strand, 26026318 - 26026474
Alignment:
Q  64 gtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttt 162  Q
    |||||||| ||||||| ||||| |||||||||||||||||||||| |||||||  ||||||||||| |||||||||||||  |||||||| ||| |||||    
T  26026318 gtttaattacacttttggtccttgtattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccataaactat-atgtttttt 26026416  T
Q  163 tgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||| |||||||| |  | |||||||||||||||||||||| |||||||||| |||||    
T  26026417 tgcagttttagtcttatctccctattttcaactccagaaacgcacagaaatgacagtt 26026474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 9393739 - 9393891
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| |||||||  |||||| ||||||| |||||||||||||| ||| || |||||| |||| |||||||| |||| |||||||||||||||||||||    
T  9393739 ttaattacacttttgatcctcgcattttgatcagctcacgaaaattgtcttgcctctttcaaatcgaacaaaaccgtc-ctaaactatcatgttttttgc 9393837  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
      |||||||| | || ||||||||||||||||||||||||  |||||| |||||    
T  9393838 tgttttagtcctacctcctattttcaactccagaaacacagtgaaatgacagtt 9393891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 65 - 219
Target Start/End: Complemental strand, 25637742 - 25637588
Alignment:
Q  65 tttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttg 164  Q
    ||||||| ||||||| |||||   |||||||||| ||||||||||||||| | ||| |||||||| |||||||||||||  |||||||| ||||||||||    
T  25637742 tttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttg 25637644  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| |  | |||||||| |||||||||||||||||||||||| |||||    
T  25637643 cagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagtt 25637588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 201
Target Start/End: Original strand, 49064037 - 49064171
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||  || |||||| |||| |||||||||| ||  |||||||||||| |||||||    
T  49064037 ttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaatcttccataaactatcatg-tttttgc 49064135  T
Q  166 aattttagtcatgccccctattttcaactccagaaa 201  Q
    | |||||||| |  | ||||||||||||||||||||    
T  49064136 acttttagtcctaactcctattttcaactccagaaa 49064171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 212
Target Start/End: Original strand, 33880623 - 33880769
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    ||||||||| |||| |||||||||||||||||||||||| ||||| ||  || |||||| |||| |||||||| |||| ||||| |||||| ||||||||    
T  33880623 ttaattgcatttttggtcctcgtattttgaccagctcacaaaaattgttctgcctctttcaaatcgaacaaaaccgtccctaaattatcatattttttgc 33880722  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaat 212  Q
    | |||||||| | |||| |||||||| || ||||||| |||| ||||    
T  33880723 acttttagtcctaccccttattttcaccttcagaaacgcacataaat 33880769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 35579428 - 35579300
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| |||||||  |||||| ||||||| ||||||||||||||| | ||| |||||| ||||  ||||||| |||| |||||||||||||||||||||    
T  35579428 ttaattacacttttgatcctcgcattttgatcagctcacgaaaatgattatgcctctttcaaatcaaacaaaaccgtc-ctaaactatcatgttttttgc 35579330  T
Q  166 aattttagtcatgccccctattttcaactc 195  Q
    | |||||||||| || ||||||||||||||    
T  35579329 agttttagtcatacctcctattttcaactc 35579300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 201
Target Start/End: Original strand, 5333883 - 5334018
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| |||||||  |||| | |||||||||| ||||||||||||||| |  ||||||||||| ||||||||||||| ||||||||| |||||||||||    
T  5333883 ttaattacacttttgatccttgcattttgaccaactcacgaaaatggtcgtacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgc 5333981  T
Q  166 aattttagtcat-gccccctattttcaactccagaaa 201  Q
    | ||||||||||  |||||||||| | ||||||||||    
T  5333982 agttttagtcatatccccctatttcctactccagaaa 5334018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 35578902 - 35579048
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||| | | |||||||||||||||| ||||||||| || | |||| |||| |||||||| ||||| ||||||||||||||||||||    
T  35578902 ttaattacacttttggtcattgcattttgaccagctcacaaaaatggtcctgccactttcaaatcgaacaaaaccgtca-taaactatcatgttttttgc 35579000  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatg 213  Q
    | ||||| || | |  ||||||||||||||||||||| || |||||||    
T  35579001 agttttaatcctacatcctattttcaactccagaaacgcagagaaatg 35579048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 9181535 - 9181688
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   |||||||||| ||||||||||||||| | ||| |||||||| |||||||||||||  |||||||| || ||||||||    
T  9181535 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-attttttttgc 9181633  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |||||||| ||||||||||||| |||||||||| |||||    
T  9181634 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtt 9181688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 76 - 219
Target Start/End: Complemental strand, 28688032 - 28687889
Alignment:
Q  76 ttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtc 175  Q
    |||| ||||| | |||||||||| ||||||||| || ||||  ||||||||||| ||||||||||||| ||||||||| |||||||||||| ||||||||    
T  28688032 ttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcacttttagtc 28687934  T
Q  176 at-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
     |  |  ||||||| ||||||||||||| |||||||||| |||||    
T  28687933 ctatcttcctatttccaactccagaaacgcacagaaatgacagtt 28687889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 65 - 219
Target Start/End: Complemental strand, 33881133 - 33880975
Alignment:
Q  65 tttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatc--gtcactaaactatcatgttttt 162  Q
    |||||||||||||||  |||||| |||||||| || |||||||||||||  ||| | |||| ||| ||||||||||  |||  |||||||||||||||||    
T  33881133 tttaattgcacttttgatcctcgcattttgactagttcacgaaaatggttctgtatgttttcaatcgaacaaaatctcgtccataaactatcatgttttt 33881034  T
Q  163 t--gcaattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |  ||| |||||||| |  ||||||||||||||||||||||| |||| ||||| |||||    
T  33881033 tttgcagttttagtcttatcccctattttcaactccagaaacgcacataaatgacagtt 33880975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 4477728 - 4477858
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcatgccccctattt 188  Q
    ||||||||||  ||||||||||||||  | ||||||||||||||| ||||||||| ||||||||||||| |||||||| |||||||| | || |||||||    
T  4477728 attttgaccaattcacgaaaatggtcccgcctcttttaaattgaataaaatcgtccctaaactatcatg-tttttgcagttttagtcctacctcctattt 4477826  T
Q  189 tc-aactccagaaacacacagaaatggcagtt 219  Q
    || |||||||||||| ||  |||||| |||||    
T  4477827 tcaaactccagaaacgcagggaaatgacagtt 4477858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 7733030 - 7732884
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   |||||||||| |||||||||||| || | ||| |||||||| |||||||||||||  |||||||| |||||||||||    
T  7733030 ttaattacacttttggtcctaccattttgaccaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 7732932  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaat 212  Q
    |||||||||| |  | ||||||||||||||||| |||  |||||||||    
T  7732931 aattttagtcctatctccctattttcaactccataaatgcacagaaat 7732884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 787332 - 787242
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactat 153  Q
    ||||||||| ||||||| || ||||||||||||||| ||||||||||||||| |  ||||||||||| ||||||||||||| |||||||||    
T  787332 ggtttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 787242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 39136689 - 39136841
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| |||||||  |||| | |||||||||||||||||||||||||  || |||||| |||| ||||||||||||| |||||||||||||||| | ||    
T  39136689 ttaattacacttttgatccttgcattttgaccagctcacgaaaatggttctgactctttcaaatcgaacaaaatcgtccctaaactatcatgtttat-gc 39136787  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |  ||||||||||||||||||  ||| ||||| |||||    
T  39136788 acttttagtcctaactctaattttcaactccagaaactaacaaaaatgacagtt 39136841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 27245724 - 27245601
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctatt 187  Q
    ||||||| || ||||||||||||||| | ||| |||||||| |||||||||||||  |||| ||| |||| ||||||||||||||||||  | |||||||    
T  27245724 attttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaattat-atgtattttgcaattttagtcatatctccctatt 27245626  T
Q  188 ttcaactccagaaacacacagaaat 212  Q
    | ||||||||||||| |||||||||    
T  27245625 tccaactccagaaacgcacagaaat 27245601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 39137076 - 39136980
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    |||||| |||||||  |||||||||||||||| |||||||||||||||| || ||||||||||| |||||||||||||  |||||| |||| |||||    
T  39137076 ttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcgtccataaactctcatattttt 39136980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 65 - 219
Target Start/End: Original strand, 5745641 - 5745795
Alignment:
Q  65 tttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttg 164  Q
    ||||||| ||||||| |||||   |||||||||| ||||||||||||||||| ||| |||||||| |||||||||| |   |||||||| ||||||||||    
T  5745641 tttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatctttcttaaactat-atgttttttg 5745739  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| |  | |||||||| | ||||||||||| |||| ||||| |||||    
T  5745740 cagttttagtcttatctccctatttcctactccagaaacgcacataaatgacagtt 5745795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 177
Target Start/End: Original strand, 16917716 - 16917826
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   |||||||||| ||||||||||||||||| ||| |||||||| |||||||||| ||  |||||||| |||||||||||    
T  16917716 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgc 16917814  T
Q  166 aattttagtcat 177  Q
    | ||||||||||    
T  16917815 agttttagtcat 16917826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 34594586 - 34594732
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||| |||||||| | |||||||||||  ||  |  |||||| |||  ||||||||| || |||||||||||||||||| ||    
T  34594586 ttaattacacttttggtcctcgcattttgactaactcacgaaaattatctcgcatcttttcaatcaaacaaaatcatccctaaactatcatgttttt-gc 34594684  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatg 213  Q
    | |||||||| | ||||||||||||||||| ||||||| ||| |||||    
T  34594685 agttttagtcctaccccctattttcaactcgagaaacaaacataaatg 34594732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 2758241 - 2758088
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||| ||||||  || ||||||||||||||  |  ||||||||||| |||||||||||||  |||||||| |||||||||||    
T  2758241 ttaattacacttttggtcctcgcattttgttcaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactat-atgttttttgc 2758143  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |  |||||||||  ||||||||||  |||||||||||| || | ||||| |||||    
T  2758142 aggtttagtcatatccccctatttctaactccagaaacgcatataaatgacagtt 2758088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 7732491 - 7732644
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| || |||| ||||| | ||||||| || ||||||||| ||||| |  ||||||||||| |||||||||||||  |||||||| |||||||||||    
T  7732491 ttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 7732589  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | ||||||||||||||||| |||| |||| ||||| |||||    
T  7732590 agttttagtcctatctccctattttcaactccataaacgcacataaatgacagtt 7732644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 16081302 - 16081455
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||  ||||||||||| |||| | |||||||| | ||| |||||||| |||||||||||||  ||||||||  ||||||||||    
T  16081302 ttaattacacttttggtccttctattttgaccaactcatggaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-ttgttttttgc 16081400  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  |  ||||||| |||||||| ||||||||||||||| |||||    
T  16081401 agttttagtcctatctacctatttccaactccaaaaacacacagaaatgacagtt 16081455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 175
Target Start/End: Complemental strand, 5334362 - 5334254
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||  |||||||||| ||||||||||| ||| |  ||||||||||| ||||||||||||| ||||||||| || ||||||||    
T  5334362 ttaattacacttttggtcctcacattttgaccaactcacgaaaatagtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atattttttgc 5334264  T
Q  166 aattttagtc 175  Q
    | ||||||||    
T  5334263 agttttagtc 5334254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 48248135 - 48247981
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt-g 164  Q
    |||||| ||||||| |||||   |||||||||| ||||| ||||||||| | ||| |||||||| |||||||||||||  |||||||| ||||||||| |    
T  48248135 ttaattacacttttggtcctaccattttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttg 48248037  T
Q  165 caattttagtc--atgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || ||||||||  || | |||||||| ||||||||||||| |||||||||| |||||    
T  48248036 cagttttagtcccat-ctccctatttccaactccagaaacgcacagaaatgacagtt 48247981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 175
Target Start/End: Original strand, 45815347 - 45815454
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| ||||| | |||||||||||||   ||||||||||||| |||||| |||| |||||||| |||| ||||||||||||| |||||||    
T  45815347 ttaattacacttttggtccttgcattttgaccagct---gaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactatcatgtttttttg 45815443  T
Q  165 caattttagtc 175  Q
    || ||||||||    
T  45815444 cagttttagtc 45815454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 213
Target Start/End: Complemental strand, 14311805 - 14311683
Alignment:
Q  91 tttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctatttt 189  Q
    |||||||| ||||| ||||||||| | ||| |||||||| |||||||||||||  |||||||| |||||||||||| |||||||| |  | ||||||||     
T  14311805 tttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactat-atgttttttgcagttttagtcttatctccctatttc 14311707  T
Q  190 caactccagaaacacacagaaatg 213  Q
    |||||| |||||| ||||||||||    
T  14311706 caactctagaaacgcacagaaatg 14311683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 207
Target Start/End: Complemental strand, 39388811 - 39388669
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| ||||| | |||||||||| ||||||||| | ||| |  ||||||||||| ||||||||||||| ||||||||| ||| |||||||    
T  39388811 ttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcctacctcttttaaatcgaacaaaatcgtctctaaactat-atgtttttttg 39388713  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacaca 207  Q
    || |||||||| |  | ||||||||||||||||| |||| ||||    
T  39388712 cagttttagtcctatctccctattttcaactccaaaaacgcaca 39388669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 15712368 - 15712521
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   |||||||||| ||||||||||||||| | ||| |||||||| |||||||||||||  |||||||| || |||||||     
T  15712368 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atattttttgt 15712466  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |||||||| |||||| |||||| |||| ||||| |||||    
T  15712467 agttttagtcctatctccctatttccaactctagaaacgcacataaatgacagtt 15712521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 16081842 - 16081689
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||| ||| ||||| | |||||||||| ||||||||| || || |  ||||||||||| |||||||||| || ||||||||| |||||||||||    
T  16081842 ttaattacacctttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcatccctaaactat-atgttttttgc 16081744  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |||||||| |||||||| |||| |||| ||||| |||||    
T  16081743 agttttagtcctatctccctatttccaactccaaaaacgcacaaaaatgacagtt 16081689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 213
Target Start/End: Complemental strand, 35161338 - 35161197
Alignment:
Q  73 cacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgcaatttt 171  Q
    ||||||| ||||| | |||||||||| |||||| || ||||| |  ||||||||||| ||||||||||||| ||||||||| ||| ||||||||| ||||    
T  35161338 cacttttggtccttgcattttgaccaactcacggaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttgcagtttt 35161240  T
Q  172 agtcat-gccccctattttcaactccagaaacacacagaaatg 213  Q
    ||||||  | |||||||| |||||||| |||| |||| |||||    
T  35161239 agtcatatctccctatttccaactccataaacgcacataaatg 35161197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 9394272 - 9394121
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||| ||| |||||||||||||||| ||||||||| |  || ||| |||| |||||||| |||| ||||||||| || ||||||||    
T  9394272 ttaattacacttttggtc-tcgcattttgaccagctcacaaaaatggtcctacctttttcaaatcgaacaaaaccgtccctaaactat-atattttttgc 9394175  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | ||||||| ||||| || ||||||| ||||||| |||||    
T  9394174 agttttagtcctatctcctatttccaacttcaaaaacacaaagaaatgacagtt 9394121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 27245206 - 27245354
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| ||||| | |||||||||| ||||||||| ||||| |  ||||||||||| ||||||||||||| | |||| || ||| |||||||    
T  27245206 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccccaaaccat-atgtttttttg 27245304  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatg 213  Q
    || |||||||| |  | || ||||| ||||||||||||| ||||||||||    
T  27245305 cagttttagtcctatctccttatttccaactccagaaacgcacagaaatg 27245354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 25637200 - 25637354
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt-g 164  Q
    |||||| ||||||| ||||| | || ||||||| |||| |||| ||||| |  ||||||||||| ||||||||||||| ||||||||| ||||||||| |    
T  25637200 ttaattacacttttggtccttgcatattgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttg 25637298  T
Q  165 caattttagtcatgcc-ccctattttcaactccagaaacacacagaaatggcagtt 219  Q
     | |||||||| |  | |||||||| ||||||||||||| |||| ||||| |||||    
T  25637299 tagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagtt 25637354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 156
Target Start/End: Complemental strand, 49064240 - 49064173
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcat 156  Q
    |||||| |||| ||||||||||||||||| |||||| |||| |||||||||||||| |||||||||||    
T  49064240 attttggccagttcacgaaaatggtcatgactctttcaaatcgaacaaaatcgtcaataaactatcat 49064173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 202
Target Start/End: Complemental strand, 45815556 - 45815473
Alignment:
Q  119 ctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt-gcaattttagtcatgccccctattttcaactccagaaac 202  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||| ||| |||||||  | || | |||||||||||||||||||    
T  45815556 ctcttttaaatcgaacaaaatcgtc-ctaaactatcatgtttttttgcagttttagttctacctcttattttcaactccagaaac 45815473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 9181955 - 9181799
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg---ttttt 162  Q
    |||||| |||||||  |||| | ||||||||||  |||||||| || ||||  ||||||||||| ||||||||||||| ||||||||| |||   |||||    
T  9181955 ttaattacacttttgatccttgcattttgaccaattcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttt 9181857  T
Q  163 tgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | || |||||||| |  | |||||||| ||||||||||||| |||| ||||| |||||    
T  9181856 tccagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagtt 9181799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 48247590 - 48247747
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactat---catgttttt 162  Q
    |||||| ||||||| ||||| | ||||||| || ||||||||| ||||| |  |||||||||||  |||||||||||| ||||| |||     | |||||    
T  48247590 ttaattacacttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaagtatatattttttttt 48247689  T
Q  163 tgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||| ||||||||||  | |||||||| |||||||| |||| |||||||||| |||||    
T  48247690 tgcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagtt 48247747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 2658842 - 2658996
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||||| ||||| ||  ||||||||| ||||| || |  ||| |||| ||||||||| |||  | || |||||| ||| ||||    
T  2658842 ttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 2658941  T
Q  166 aattttagtcatgccccctattttc-aactccagaaacacacagaaatggcagtt 219  Q
    | |||| ||||| || ||||||||| ||||||| |||| || |||||||||||||    
T  2658942 atttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagtt 2658996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 171
Target Start/End: Complemental strand, 18535418 - 18535321
Alignment:
Q  73 cacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaatttt 171  Q
    ||||||| ||||||||||||||||  ||||| |||||||||| |  |||||| |||| |||||||| |||| ||||||||| || ||||||||| ||||    
T  18535418 cacttttggtcctcgtattttgacatgctcaagaaaatggtc-tacctctttcaaatcgaacaaaaccgtccctaaactataatattttttgcactttt 18535321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 5746183 - 5746029
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg--tttttt 163  Q
    |||||| ||||||| ||||| | |||||||| | ||||||||| || || || ||||||||||| |||||||| ||||  |||||||| |||  ||||||    
T  5746183 ttaattacacttttggtccttgcattttgactaactcacgaaattgatc-tgcctcttttaaatcgaacaaaaccgtccataaactat-atgtttttttt 5746086  T
Q  164 gcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||||||||||| |  | |||||||| |||||||| |||| |||| ||||| |||||    
T  5746085 gcaattttagtcttatctccctatttccaactccataaacgcacataaatgacagtt 5746029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 24929851 - 24929693
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaac----tatcatgtttt 161  Q
    |||||| || |||| ||||| | |||||||||| ||||||||| ||||| |  |||||||||||  |||||||||||| ||||||    |||  | ||||    
T  24929851 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcaaacaaaatcgtccctaaactatatatattttttt 24929752  T
Q  162 ttgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||||| |||||||| |  | |||||||| |||||||| |||| |||||||||| |||||    
T  24929751 ttgcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagtt 24929693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 219
Target Start/End: Complemental strand, 26026864 - 26026708
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| ||||||| |||||  ||||||||| |  |||||||||||||| | ||| || ||||| |||||||| | ||  |||||||| ||||||||    
T  26026864 ggtttaattacacttttggtcctactattttgacaaattcacgaaaatggtcctatcttttataaatcgaacaaaaccatccttaaactat-atgttttt 26026766  T
Q  163 tgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||| |||||||  |  | |||||||| |||||||| |||| || ||||||| |||||    
T  26026765 tgcagttttagttttatctccctatttccaactccaaaaacgcatagaaatgacagtt 26026708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 786808 - 786939
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgcaattttagtcat-gccccctat 186  Q
    |||||||||| |||||||||||||||||  || |||||||| |||||||||  ||  |||||||| ||| ||||||||| |||||||| |  | ||||||    
T  786808 attttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaattttccttaaactat-atgtttttttgcagttttagtcctatctccctat 786906  T
Q  187 tttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||||| |||| ||||||| || |||||    
T  786907 ttccaactccataaacgcacagaagtgacagtt 786939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 28687619 - 28687749
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctatt 187  Q
    |||||||||| ||||||||||||||  | ||| || ||||| |||||||||||||  |||||||| || ||||||||| || ||||| |  |  ||||||    
T  28687619 attttgaccaactcacgaaaatggttctatcttttataaatcgaacaaaatcgtccttaaactat-attttttttgcagttctagtcctatcttcctatt 28687717  T
Q  188 ttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||||||||||||| |||| ||||| |||||    
T  28687718 tccaactccagaaacgcacataaatgacagtt 28687749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 11971360 - 11971433
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt 163  Q
    |||||||||  ||||||||||||||| | ||| |||||||| |||||||||||||  |||||||| |||||||||    
T  11971360 attttgacctactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 11971433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 219
Target Start/End: Complemental strand, 11973947 - 11973792
Alignment:
Q  64 gtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt 163  Q
    |||||||| || |||| ||||| | |||||||||| |  |||||| ||||  |  ||||||||||||||||||||||||| ||||| ||  ||| |||||    
T  11973947 gtttaattacatttttggtccttgcattttgaccaacgtacgaaattggttctacctcttttaaattgaacaaaatcgtccctaaatta-aatggttttt 11973849  T
Q  164 gcaattttag-tcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    ||| |||||| ||   |  ||||||| ||||| ||||||| |||||||||| |||||    
T  11973848 gcagttttagttctatcttcctatttccaacttcagaaacgcacagaaatgacagtt 11973792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 219
Target Start/End: Original strand, 14311371 - 14311472
Alignment:
Q  119 ctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgcaattttagtcat-gccccctattttcaactccagaaacacacagaaatggca 216  Q
    ||||||||||||||| ||||||||| ||||||||| ||| |||||| || ||||| || |  | |||||||| |||||||| ||||||||| ||||| ||    
T  14311371 ctcttttaaattgaataaaatcgtccctaaactat-atgtttttttacagttttaatcctatctccctatttccaactccataaacacacataaatgaca 14311469  T
Q  217 gtt 219  Q
    |||    
T  14311470 gtt 14311472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 219
Target Start/End: Complemental strand, 26048465 - 26048337
Alignment:
Q  90 ttttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctattt 188  Q
    ||||||||| ||||||||| ||||| |  |||||||||||  |||||||| |||  |||||||| ||| |||||||| ||||||||||  | ||||||||    
T  26048465 ttttgaccaactcacgaaattggtcctacctcttttaaatcaaacaaaattgtccttaaactat-atg-tttttgcagttttagtcatatctccctattt 26048368  T
Q  189 tcaactccagaaacacacagaaatggcagtt 219  Q
     |||||||| |||  |||| ||||| |||||    
T  26048367 ccaactccaaaaatgcacataaatgacagtt 26048337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 26047983 - 26048047
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactat 153  Q
    |||| ||||| ||||||||||||||||| ||| |||||||| ||| ||||| |||  ||||||||    
T  26047983 atttcgaccaactcacgaaaatggtcatatcttttttaaatcgaataaaattgtccttaaactat 26048047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 74; Significance: 5e-34; HSPs: 6)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 205910 - 205758
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||||||||||  |||||||||| ||||||||||||||| || |||||| |||| |||||||| |||| |||||||||||||| ||||||    
T  205910 ttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgt-ttttgc 205812  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| | |  |||||||||||||||| |||| || |||||||||||||    
T  205811 agttttagtcctacgtcctattttcaactccaaaaacgcagagaaatggcagtt 205758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 162
Target Start/End: Original strand, 204928 - 205027
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||||  |||||| |  |||||| ||||  |||||||| ||| ||||||||||||||||||    
T  204928 ggtttaattacacttttggtccttgtattttgaccagctcacgactatggtccttcctctttcaaatcaaacaaaattgtccctaaactatcatgttttt 205027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 205032 - 205106
Alignment:
Q  145 ctaaactatcatgttttttgcaattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||||||||||||||||||||| |||||||| | || |||||||||||||| ||||||||| |||||||| ||||    
T  205032 ctaaactatcatgttttttgcagttttagtcctacctcctattttcaactctagaaacacagagaaatggaagtt 205106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 210880 - 210783
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt 163  Q
    |||||| ||||||| ||||||  |||||||||| |||| |||||||||| || |||||| |||| |||||||| |||| |||||||||||| ||||||    
T  210880 ttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatttttttt 210783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 162
Target Start/End: Original strand, 205358 - 205457
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| |||||||  |||| ||||||||||||||||||||  |||||| |  |||||| |||| ||||||| | ||| ||||||||||||||||||    
T  205358 ggtttaattacacttttgatccttgtattttgaccagctcacgactatggtccttcctctttcaaatcgaacaaatttgtccctaaactatcatgttttt 205457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 205462 - 205535
Alignment:
Q  145 ctaaactatcatgttttttgcaattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||||||||||| ||||||| | ||||||||   || |||||||||||||| |||| |||| |||||||||||||    
T  205462 ctaaactatcat-ttttttgtagttttagtccaacctcctattttcaactctagaatcacagagaaatggcagtt 205535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 66 - 208
Target Start/End: Complemental strand, 159424 - 159282
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||||||| |||| ||||   ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||||   ||||||||||| ||||||||    
T  159424 ttaattgcacatttaatccttccatttttaccggctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcgttcataaactatcatattttttgc 159325  T
Q  166 aattttagtcatgccccctattttcaactccagaaacacacag 208  Q
    | |||||||||| ||||||||||||| ||||| |||| |||||    
T  159324 agttttagtcataccccctattttcacctccaaaaacgcacag 159282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 208
Target Start/End: Original strand, 159038 - 159165
Alignment:
Q  82 tcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcg--tcactaaactatcatgttttttgcaattttagtcatgc 179  Q
    |||||| ||||| ||||||||||||||||| || || |||||| |||| |||||||| ||  || |||||||||| | ||||||||| |||||||| | |    
T  159038 tcctcgcatttttaccagctcacgaaaatgatcctgcctctttcaaatcgaacaaaaccgtctctctaaactatcgt-ttttttgcagttttagtcctac 159136  T
Q  180 cccctattttcaactccagaaacacacag 208  Q
    || ||||||||| ||||| |||| |||||    
T  159137 cctctattttcacctccaaaaacgcacag 159165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 7911159 - 7911006
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| |||||||| |||||| |||||||||| ||||||||||||||  |  ||||||||||| ||||||||||||| ||||||||| || ||||||||    
T  7911159 ttaattacacttttaatcctcgcattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccctaaactat-atattttttgc 7911061  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||||||||||  ||| ||||||||||||||| |||| |||||||||| |||||    
T  7911060 agttttagtcatatccctctattttcaactccataaacgcacagaaatgacagtt 7911006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 202
Target Start/End: Complemental strand, 28877435 - 28877297
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| ||||||| ||||||| |||||||||| |||||||||||||| ||  |||||| |||||||||||||| ||| || |||||||||||||||    
T  28877435 ggtttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttatacctctttcaaattgaacaaaattgtccct-aactatcatgttttt 28877337  T
Q  163 tgcaattttagtcatgccccctattttcaactccagaaac 202  Q
    |||  |||||||| | ||  ||||||| ||||||||||||    
T  28877336 tgctgttttagtcctaccttctatttttaactccagaaac 28877297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 18050136 - 18049988
Alignment:
Q  64 gtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt 163  Q
    |||||||| || |||| ||||| | |||||||||| ||||||||| |||||||  ||||||||||| ||||||||||||| ||||||||| |||||||||    
T  18050136 gtttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttt 18050038  T
Q  164 gcaattttagtcat-gccccctattttcaactccagaaacacacagaaat 212  Q
    ||  ||||| || |  | |||||||||||||||||||||| |||||||||    
T  18050037 gctgttttaatcctatctccctattttcaactccagaaacgcacagaaat 18049988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 599535 - 599688
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| || |||| ||||| | |||||||||| ||||||||| |||||||  ||||||||||| |||||||||| || ||||| ||| |||||||||||    
T  599535 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcatccctaaattat-atgttttttgc 599633  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||||||||||  | |||||||| ||||||||||||| |||| ||||| |||||    
T  599634 agttttagtcatatctccctatttccaactccagaaacgcacacaaatgacagtt 599688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 28254969 - 28254816
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | |||||||||| ||||||||| ||||| |  ||||||||||| ||||||||||||| ||||||||| ||  |||||||    
T  28254969 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-ataatttttgc 28254871  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |||||||| ||||||||||||| |||||||||| |||||    
T  28254870 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtt 28254816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 41260781 - 41260651
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctatt 187  Q
    ||||||| || ||||||||| || ||||  ||||||||||| ||||||||||||| ||||||||| |||||||||||| |||||||| |  | |||||||    
T  41260781 attttgatcaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagtcctatctccctatt 41260683  T
Q  188 ttcaactccagaaacacacagaaatggcagtt 219  Q
    ||||||||||||||| |||| ||||| |||||    
T  41260682 ttcaactccagaaacgcacataaatgacagtt 41260651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 9796729 - 9796882
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | |||||||||| ||||| ||| ||||| |  ||||||||||| |||||||||| ||  |||||||| |||||||||||    
T  9796729 ttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcatccataaactat-atgttttttgc 9796827  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||||||||||  | |||||||| |||||||| |||| |||||||||| |||||    
T  9796828 agttttagtcatatctccctatttccaactccataaacgcacagaaatgacagtt 9796882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 175
Target Start/End: Original strand, 15255856 - 15255964
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||| | |||||||||| ||||||||| ||||| |  ||||||||||| ||||||||||||| ||||||||| |||||||||||    
T  15255856 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgc 15255954  T
Q  166 aattttagtc 175  Q
    | ||||||||    
T  15255955 agttttagtc 15255964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 35427355 - 35427202
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||| |||||||||| ||||||||||||||  |  ||||||||||  ||||||||||||| ||||| ||| || ||||||||    
T  35427355 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattat-atattttttgc 35427257  T
Q  166 aattttagt--catgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||  ||| | |||||||| |||||||| |||| |||||||||| |||||    
T  35427256 agttttagtcccat-ctccctatttccaactccataaacgcacagaaatgacagtt 35427202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 600041 - 599888
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   |||||||||| || |||||||||||||| ||| |||||||| |||||||||||||  |||||||| |||||||||||    
T  600041 ttaattacacttttggtcctaccattttgaccaactaacgaaaatggtcatatcttttttaaatggaacaaaatcgtccttaaactat-atgttttttgc 599943  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | | |||||| ||| ||||||||| || ||||||| |||||    
T  599942 agttttagtcttatctctctatttccaattccagaaacgcatagaaatgacagtt 599888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 5730820 - 5730973
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   |||||||||| ||||||||||| ||| | ||| ||||||||  ||||||||||||  |||||||| |||||||||||    
T  5730820 ttaattacacttttggtcctaccattttgaccaactcacgaaaatagtcctatcttttttaaatcaaacaaaatcgtccttaaactat-atgttttttgc 5730918  T
Q  166 aattttagtcatgcc-ccctattttcaactccagaaacacacagaaatggcagtt 219  Q
      |||||||| | || ||||||||| ||||||||||||  ||||||||| |||||    
T  5730919 tgttttagtcctacctccctatttttaactccagaaacgtacagaaatgacagtt 5730973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 219
Target Start/End: Complemental strand, 18428308 - 18428151
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| ||||||| |||||   |||||||||| ||||||||||||||| | ||| |||||||| |||||||||||||  |||||||| ||||||||    
T  18428308 ggtttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 18428210  T
Q  163 t-gcaattttagtcatgcc-ccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||| ||||| || |  | |||||||| ||||||||||||| |||| ||||| |||||    
T  18428209 ttgcagttttactcctatctccctatttccaactccagaaacgcacaaaaatgacagtt 18428151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 18049595 - 18049747
Alignment:
Q  68 aattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgca 166  Q
    |||| ||||||| |||||   |||||||||| ||||||||||||||  | ||| |||||||| |||||||||||||  |||||||| ||| |||||||||    
T  18049595 aattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttgca 18049693  T
Q  167 attttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
     |||||||| |  | |||||||| ||||||||||||| |||||||||| |||||    
T  18049694 gttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtt 18049747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 28254428 - 28254576
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| |||||   ||||||| || ||||||||||||||| | ||| ||||||||||||||||||||||  |||||||| ||| |||||||    
T  28254428 ttaattacacttttggtcctaccattttgatcaactcacgaaaatggtcctatctattttaaattgaacaaaatcgtccttaaactat-atgtttttttg 28254526  T
Q  165 caattttagtcat-gccccctattttcaactccagaaacacacagaaatg 213  Q
    || |||||||| |  | |||||||| ||||||||||||| || |||||||    
T  28254527 cagttttagtcctatctccctatttccaactccagaaacgcatagaaatg 28254576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 219
Target Start/End: Original strand, 18805165 - 18805318
Alignment:
Q  64 gtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt 163  Q
    |||||||| ||||||| ||||  | |||||||| ||||||||||||||||  | |||||||||||| ||||||||  ||| |  |||||| |||||||||    
T  18805165 gtttaattacacttttggtccctgcattttgacaagctcacgaaaatggttct-tctcttttaaatcgaacaaaactgtcccagaactat-atgtttttt 18805262  T
Q  164 gcaattttagtcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
     |  |||||||| | || ||||| |||||||||||||||||| ||||||| |||||    
T  18805263 cctgttttagtcctacctcctatcttcaactccagaaacacagagaaatgacagtt 18805318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 162
Target Start/End: Original strand, 28876903 - 28877002
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    |||||| || ||||||| ||||||| ||||||| ||||||||||||||  |  || |||||| |||| ||||||||||||| ||||||||||||||||||    
T  28876903 ggtttatttacacttttggtcctcgcattttgatcagctcacgaaaataattctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgttttt 28877002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 16578639 - 16578486
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   |||||||| | |||||||||||||| || ||| ||| |||| |||||||||| ||| |||||||| |||||||||||    
T  16578639 ttaattacacttttggtcctaccattttgacgaactcacgaaaatggttatatctttttcaaatcgaacaaaatcatcattaaactat-atgttttttgc 16578541  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  | |||||||| |||| | |||||| |||||||||| |||||    
T  16578540 agttttagtcctatctccctatttccaacactagaaacgcacagaaatgacagtt 16578486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 42035775 - 42035928
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| ||||||  |||||||||| ||||||||||||||  |  ||||||||||| |||||||||||||  |||||||| || | ||||||    
T  42035775 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactat-atatattttgc 42035873  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    |||||||||| |  | ||||||||  ||||||| |||| |||| ||||| |||||    
T  42035874 aattttagtcctatctccctatttctaactccataaacgcacaaaaatgacagtt 42035928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 213
Target Start/End: Complemental strand, 15256374 - 15256224
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt-- 163  Q
    |||||| ||||||| |||||   |||||||||| |||| |||||||||| | ||| |||||||| |||||||||||||  |||||||| |||||||||      
T  15256374 ttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttt 15256276  T
Q  164 -gcaattttagtcatgcc-ccctattttcaactccagaaacacacagaaatg 213  Q
     ||| || |||||||  | |||||||| ||||||||||||| ||||||||||    
T  15256275 tgcagttctagtcatatctccctatttccaactccagaaacgcacagaaatg 15256224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 175
Target Start/End: Original strand, 41260274 - 41260382
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   |||||||||| |||| |||||||||| | ||| |||||||| |||||||||||||  |||||||| |||||||||||    
T  41260274 ttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 41260372  T
Q  166 aattttagtc 175  Q
    | ||||||||    
T  41260373 agttttagtc 41260382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 2208740 - 2208864
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctatt 187  Q
    |||||||||| ||||||||||| ||| | ||| |||||||| |||||||||||||  ||||||||    |||||| |||||||||||||  | |||||||    
T  2208740 attttgaccaactcacgaaaattgtcctatcttttttaaatcgaacaaaatcgtccttaaactatatatttttttacaattttagtcatatctccctatt 2208839  T
Q  188 ttcaactccagaaacacacagaaat 212  Q
    ||||| |||||||||  ||||||||    
T  2208840 ttcaattccagaaacgtacagaaat 2208864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 219
Target Start/End: Complemental strand, 6115646 - 6115500
Alignment:
Q  74 acttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgcaatttta 172  Q
    |||||| ||||| |||||||||||| ||| ||||| ||||| |  ||||||||||| ||||||||||||| ||||||||| ||| ||||||| | |||||    
T  6115646 acttttggtccttgtattttgaccaactcgcgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttgtagtttta 6115548  T
Q  173 g-tcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||   | || |||||||||||| |||||| |||||||||| |||||    
T  6115547 gttctatctccttattttcaactcaagaaacgcacagaaatgacagtt 6115500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 16578134 - 16578247
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctatt 187  Q
    |||||||||| ||||||||| ||||| |  ||||||||||| ||||||||||||| ||||| ||| |||||||||||| |||| ||| |  | |||||||    
T  16578134 attttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaattat-atgttttttgcagttttggtcctatctccctatt 16578232  T
Q  188 ttcaactccagaaac 202  Q
    | |||||||||||||    
T  16578233 tccaactccagaaac 16578247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 26252847 - 26252959
Alignment:
Q  101 tcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcat-gccccctattttcaactccaga 199  Q
    |||||||| |||| |  |||||||||||| ||||||||||||| ||||||||| ||||||| |||| |||||||| |  | |||||||| ||||||||||    
T  26252847 tcacgaaattggtaacatctcttttaaatcgaacaaaatcgtccctaaactat-atgttttgtgcagttttagtcctatctccctatttccaactccaga 26252945  T
Q  200 aacacacagaaatg 213  Q
    ||| | ||||||||    
T  26252946 aacgctcagaaatg 26252959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 166
Target Start/End: Original strand, 7910619 - 7910718
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| || |||| ||||||  ||||||| || |||||||||||||| ||  ||||||||||| ||||||||||||| ||||| ||| |||||||||||    
T  7910619 ttaattacatttttggtcctcacattttgatcaactcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaattat-atgttttttgc 7910717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 10047155 - 10047083
Alignment:
Q  90 ttttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    |||||| || ||||||||||| ||| ||| |||||||||| ||||||||| ||| ||||||||||||||||||    
T  10047155 ttttgatcaactcacgaaaatagtcttgtttcttttaaatcgaacaaaatggtctctaaactatcatgttttt 10047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 171
Target Start/End: Original strand, 2617746 - 2617853
Alignment:
Q  64 gtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt 163  Q
    |||||||| || |||| ||||| | ||||||||| | |||||||| |  |||||||| ||| |||||||||||| | |||  || |||||||||||||||    
T  2617746 gtttaattacattttttgtccttgcattttgaccggttcacgaaattaatcatgtctttttcaaattgaacaaagtagtccttatactatcatgtttttt 2617845  T
Q  164 gcaatttt 171  Q
    ||||||||    
T  2617846 gcaatttt 2617853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 175
Target Start/End: Complemental strand, 34799626 - 34799518
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||   ||||||||||  | |||||| ||||| |  ||||||||||| ||||||||| ||| ||||||||| |||||||||||    
T  34799626 ttaattacacttttggtcctttcattttgaccaattaacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactat-atgttttttgc 34799528  T
Q  166 aattttagtc 175  Q
    | ||||||||    
T  34799527 agttttagtc 34799518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 175
Target Start/End: Complemental strand, 42036292 - 42036206
Alignment:
Q  89 attttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttgcaattttagtc 175  Q
    |||||||||| || ||||||||| || |  ||||||||||| ||||||||||||| ||||||||| ||| ||||||||| ||||||||    
T  42036292 attttgaccaacttacgaaaatgatcttacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttgcagttttagtc 42036206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 9797270 - 9797116
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||| ||||||| |||||   |||||||||| ||||||||||||||  | ||| ||||||||  || |||||||||  |||||||| ||| |||||||    
T  9797270 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcaaataaaatcgtccttaaactat-atgtttttttg 9797172  T
Q  165 caattttag-tcatgccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    || |||||| ||   |  ||||||| |||||||| |||| |||||||||| |||||    
T  9797171 cagttttagttctatctacctatttccaactccataaacgcacagaaatgacagtt 9797116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 9930199 - 9930076
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| ||||||| |||||||||||||| ||  ||||||||| ||||| || |  ||| |||| ||||||||| |||  | ||||||||| ||| ||||    
T  9930199 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttgttgc 9930100  T
Q  166 aattttagtcatgccccctatttt 189  Q
    | |||| ||| | ||||| |||||    
T  9930099 atttttcgtcctaccccccatttt 9930076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 18674206 - 18674256
Alignment:
Q  121 cttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaatttta 172  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||||| |||||    
T  18674206 cttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcagtttta 18674256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 35426842 - 35426893
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtc 114  Q
    ||||||||| |||||||||||||   |||||||||| |||||||||||||||    
T  35426842 ggtttaattacacttttagtcctaccattttgaccaactcacgaaaatggtc 35426893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 202
Target Start/End: Complemental strand, 15623 - 15506
Alignment:
Q  84 ctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttagtcatgccccc 183  Q
    |||| ||||||| |||||||||||||||||| || |||||| |||| ||||||||  ||| |||||||||||||| ||||| | |||||||||| || ||    
T  15623 ctcgcattttgatcagctcacgaaaatggtcctgactctttcaaatcgaacaaaactgtccctaaactatcatgt-ttttgtagttttagtcatacctcc 15525  T
Q  184 tattttcaactccagaaac 202  Q
    |||||||||||||||||||    
T  15524 tattttcaactccagaaac 15506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 212
Target Start/End: Original strand, 15124 - 15261
Alignment:
Q  74 acttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgcaattttag 173  Q
    |||||| ||| ||| |||||||||||||| |||||||| |  || |||||| |||| |||||||| |  | ||||||||||||| |||||||| |||| |    
T  15124 acttttggtcatcgcattttgaccagctcgcgaaaatgattctgcctctttcaaatcgaacaaaaacaaccctaaactatcatg-tttttgcagtttttg 15222  T
Q  174 tcatgccccctattttcaactccagaaacacacagaaat 212  Q
    || | || ||||||||||||| || |||| |||||||||    
T  15223 tcttacctcctattttcaacttcataaacgcacagaaat 15261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 177
Target Start/End: Original strand, 46269 - 46380
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatg-ttttttg 164  Q
    |||||||||||||| ||||||| |||||||||| || |||||||||||  |  ||||||||||| |||||||||| || ||||||||| ||| |||||||    
T  46269 ttaattgcacttttggtcctcgcattttgaccaacttacgaaaatggttctacctcttttaaatcgaacaaaatcatccctaaactat-atgtttttttg 46367  T
Q  165 caattttagtcat 177  Q
    || ||||||||||    
T  46368 cagttttagtcat 46380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 46811 - 46715
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgtttttt 163  Q
    |||||| ||||||| |||||   |||||||||| ||||||||||||||| | | | |||||||| |||||||||||||  |||||||| |||||||||    
T  46811 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatatattttaaatcgaacaaaatcgtctttaaactat-atgtttttt 46715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1432 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 171
Target Start/End: Complemental strand, 608 - 504
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||| |||||||  |||||| |||||||| ||||||||||||||||| || |||||| |||| ||||||||  ||| ||||||||| |||||||||||    
T  608 ttaattacacttttgatcctcgcattttgacgagctcacgaaaatggtcttgcctctttcaaatcgaacaaaacagtctctaaactat-atgttttttgc 510  T
Q  166 aatttt 171  Q
    | ||||    
T  509 agtttt 504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 6395 - 6548
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||||||||||| |||||   ||||||| || |||| |||||||||  | ||| |||||||| |||||||||||||  |||| ||| |||||||||||    
T  6395 ttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattat-atgttttttgc 6493  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  |  ||||||| ||||| ||||||| |||||||||| |||||    
T  6494 agttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagtt 6548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 219
Target Start/End: Complemental strand, 6942 - 6781
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| | ||||| ||||| | ||||||||||  | |||||| ||||| |   |||||||||| ||||||||||||  |||||||| |||||||||    
T  6942 ggtttaattactcttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaacta-catgttttt 6844  T
Q  163 t-gcaattttagtcatgcc-----ccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||| |||||||| | ||     |||||||||||||||||||||| |||||||||| |||||    
T  6843 ttgcagttttagtcctacctatctccctattttcaactccagaaacgcacagaaatgacagtt 6781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 6413 - 6566
Alignment:
Q  66 ttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttttgc 165  Q
    |||||||||||||| |||||   ||||||| || |||| |||||||||  | ||| |||||||| |||||||||||||  |||| ||| |||||||||||    
T  6413 ttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattat-atgttttttgc 6511  T
Q  166 aattttagtcat-gccccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | |||||||| |  |  ||||||| ||||| ||||||| |||||||||| |||||    
T  6512 agttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagtt 6566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 219
Target Start/End: Complemental strand, 6960 - 6799
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtcatgtctcttttaaattgaacaaaatcgtcactaaactatcatgttttt 162  Q
    ||||||||| | ||||| ||||| | ||||||||||  | |||||| ||||| |   |||||||||| ||||||||||||  |||||||| |||||||||    
T  6960 ggtttaattactcttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaacta-catgttttt 6862  T
Q  163 t-gcaattttagtcatgcc-----ccctattttcaactccagaaacacacagaaatggcagtt 219  Q
    | ||| |||||||| | ||     |||||||||||||||||||||| |||||||||| |||||    
T  6861 ttgcagttttagtcctacctatctccctattttcaactccagaaacgcacagaaatgacagtt 6799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 6626 - 6575
Alignment:
Q  63 ggtttaattgcacttttagtcctcgtattttgaccagctcacgaaaatggtc 114  Q
    |||||||| |||||||||||||||| |||||||||| ||| ||||| |||||    
T  6626 ggtttaatagcacttttagtcctcgcattttgaccaactcgcgaaactggtc 6575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University