View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1946_high_82 (Length: 320)

Name: NF1946_high_82
Description: NF1946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1946_high_82
NF1946_high_82
[»] chr6 (2 HSPs)
chr6 (170-320)||(22053021-22053170)
chr6 (20-98)||(22053245-22053317)
[»] chr2 (2 HSPs)
chr2 (170-320)||(44363406-44363555)
chr2 (20-98)||(44363630-44363702)
[»] chr8 (4 HSPs)
chr8 (159-319)||(24924416-24924581)
chr8 (211-293)||(31387078-31387158)
chr8 (23-98)||(31386891-31386965)
chr8 (25-84)||(1086556-1086616)
[»] chr3 (4 HSPs)
chr3 (159-293)||(13822804-13822935)
chr3 (29-98)||(13822995-13823064)
chr3 (22-98)||(4264441-4264517)
chr3 (248-316)||(4264644-4264712)
[»] chr1 (12 HSPs)
chr1 (163-320)||(17224295-17224453)
chr1 (238-320)||(25871893-25871975)
chr1 (25-98)||(17224158-17224231)
chr1 (24-98)||(25871695-25871769)
chr1 (23-98)||(19151977-19152052)
chr1 (25-98)||(23679036-23679109)
chr1 (165-223)||(25871838-25871895)
chr1 (238-316)||(19151765-19151843)
chr1 (238-316)||(23678821-23678899)
chr1 (167-216)||(19151847-19151897)
chr1 (167-216)||(23678903-23678953)
chr1 (38-98)||(38245596-38245656)
[»] chr7 (4 HSPs)
chr7 (159-283)||(12103324-12103444)
chr7 (35-98)||(12103200-12103263)
chr7 (25-98)||(41546039-41546112)
chr7 (167-216)||(41546192-41546242)
[»] scaffold0008 (1 HSPs)
scaffold0008 (205-320)||(86386-86501)
[»] chr4 (4 HSPs)
chr4 (24-98)||(14056230-14056304)
chr4 (246-318)||(14056021-14056094)
chr4 (23-98)||(55039335-55039410)
chr4 (167-216)||(55039490-55039540)
[»] chr5 (1 HSPs)
chr5 (33-73)||(1501226-1501266)


Alignment Details
Target: chr6 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 170 - 320
Target Start/End: Complemental strand, 22053170 - 22053021
Alignment:
Q  170 cctctctcatttcaattcattcggtggaaaatttttctttcttcaccctagttccatccattccccccttcattctgccaccaccattcattccgccaca 269  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||| ||    
T  22053170 cctctctcatttcaattcatttggtggaaaatttctctttcttcaccctagttccatccattccccccttcattccgccacaaccattc-ttccgcccca 22053072  T
Q  270 cccttcattccgttcaaccctagctgtcgtctcctgctccatcttccgttc 320  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  22053071 cccttcattccgttcaaccctagttgccgtctcctgctccatcttccgttc 22053021  T

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Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 22053317 - 22053245
Alignment:
Q  20 ttaaagagcagtgataggtataccaccataggtggtaatacaccttataccacctttgtgtggcaatacaattaataat 98  Q
    |||| |||||||||||| ||||||||||||| ||      ||||||||||||||||| |||||||||||||||||||||    
T  22053317 ttaatgagcagtgatagatataccaccatagatg------caccttataccacctttatgtggcaatacaattaataat 22053245  T

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Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 170 - 320
Target Start/End: Complemental strand, 44363555 - 44363406
Alignment:
Q  170 cctctctcatttcaattcattcggtggaaaatttttctttcttcaccctagttccatccattccccccttcattctgccaccaccattcattccgccaca 269  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||| ||    
T  44363555 cctctctcatttcaattcatttggtggaaaatttctctttcttcaccctagttccatccattccccccttcattccgccacaaccattc-ttccgcccca 44363457  T
Q  270 cccttcattccgttcaaccctagctgtcgtctcctgctccatcttccgttc 320  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  44363456 cccttcattccgttcaaccctagttgccgtctcctgctccatcttccgttc 44363406  T

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Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 44363702 - 44363630
Alignment:
Q  20 ttaaagagcagtgataggtataccaccataggtggtaatacaccttataccacctttgtgtggcaatacaattaataat 98  Q
    |||| |||||||||||| ||||||||||||| ||      ||||||||||||||||| |||||||||||||||||||||    
T  44363702 ttaatgagcagtgatagatataccaccatagatg------caccttataccacctttatgtggcaatacaattaataat 44363630  T

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Target: chr8 (Bit Score: 102; Significance: 1e-50; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 159 - 319
Target Start/End: Complemental strand, 24924581 - 24924416
Alignment:
Q  159 tttagccgtaccctctctcatttcaattcattcggtggaaaatttttctttcttcaccctagttccatccattccccccttcattctgccaccaccattc 258  Q
    |||| ||||| ||||||||||||||||||||| | |||||||||| |||||||||||||||||||||| |||||| || |||| ||||||||||||||||    
T  24924581 tttaaccgtatcctctctcatttcaattcatttgttggaaaatttctctttcttcaccctagttccattcattccaccattcactctgccaccaccattc 24924482  T
Q  259 attccgccacacccttcattccgttcaaccctag-----ctgtcgtctcctgctccatcttccgtt 319  Q
    ||||||||||||||||||||||||||||||||||     | | |||||||||||||||||||||||    
T  24924481 attccgccacacccttcattccgttcaaccctagccgcaccgccgtctcctgctccatcttccgtt 24924416  T

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Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 211 - 293
Target Start/End: Original strand, 31387078 - 31387158
Alignment:
Q  211 ttcaccctagttccatccattccccccttcattctgccaccaccattcattccgccacacccttcattccgttcaaccctagc 293  Q
    |||||||| ||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  31387078 ttcacccttgttccatccattcccc--ttcattccgccaccaccattcattccggcacacccttcattccgttcaaccttagc 31387158  T

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Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 31386891 - 31386965
Alignment:
Q  23 aagagcagtgataggtataccaccataggtggtaatacaccttataccacctttgtgtggcaatacaattaataat 98  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||||  || |||||| ||| ||||||||||    
T  31386891 aagagcagtgataggtgtaccaccataggtggcaacacaccttataccactcttatgtggc-ataaaattaataat 31386965  T

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Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 1086616 - 1086556
Alignment:
Q  25 gagcagtgataggtataccaccataggtggtaata-caccttataccacctttgtgtggca 84  Q
    ||||||||||| || ||||||||||||||| |||| |||| ||||||||||||||||||||    
T  1086616 gagcagtgataagtgtaccaccataggtggcaataccaccatataccacctttgtgtggca 1086556  T

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Target: chr3 (Bit Score: 101; Significance: 5e-50; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 159 - 293
Target Start/End: Complemental strand, 13822935 - 13822804
Alignment:
Q  159 tttagccgtaccctctctcatttcaattcattcggtggaaaatttttctttcttcaccctagttccatccattccccccttcattctgccaccaccattc 258  Q
    |||||||||||||| | ||||||||||||||||||||||| |||| ||||||   ||||||||||||||||||||||||||||||| |||||||||||||    
T  13822935 tttagccgtaccctttatcatttcaattcattcggtggaacatttctctttc---accctagttccatccattccccccttcattccgccaccaccattc 13822839  T
Q  259 attccgccacacccttcattccgttcaaccctagc 293  Q
    |||||||||||||||||||||||||||||||||||    
T  13822838 attccgccacacccttcattccgttcaaccctagc 13822804  T

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Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 13823064 - 13822995
Alignment:
Q  29 agtgataggtataccaccataggtggtaatacaccttataccacctttgtgtggcaatacaattaataat 98  Q
    |||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||    
T  13823064 agtgataggtataccaccataggtggcaatacaccttataccacccttatgtggcaatacaattaataat 13822995  T

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Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 4264441 - 4264517
Alignment:
Q  22 aaagagcagtgataggtataccaccataggtggtaatacaccttataccacctttgtgtggcaatacaattaataat 98  Q
    ||||||||||||||||| ||||||||||||||| | |||||||||||||||| || |||||||  |||| |||||||    
T  4264441 aaagagcagtgataggtgtaccaccataggtggcactacaccttataccacccttatgtggcaccacaaataataat 4264517  T

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Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 316
Target Start/End: Original strand, 4264644 - 4264712
Alignment:
Q  248 caccaccattcattccgccac-acccttcattccgttcaaccctagctgtcgtctcctgctccatcttcc 316  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||| | ||||||||| ||||||||||    
T  4264644 caccaccattcattcagccaccaccattcattcc-ttcaaccctagccgccgtctcctgatccatcttcc 4264712  T

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Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 163 - 320
Target Start/End: Original strand, 17224295 - 17224453
Alignment:
Q  163 gccgtaccctctctcatttcaattcattcggtggaaaatttttctttcttcaccctagttccatcc-attccccccttcattctgccaccaccattcatt 261  Q
    |||||||||||||||||||||||||||| | | |||||||| |||||||||||||||||||  ||| |  || || |||||||  |||||||||||||||    
T  17224295 gccgtaccctctctcatttcaattcatttgatagaaaatttctctttcttcaccctagttcattccgacaccaccattcattcctccaccaccattcatt 17224394  T
Q  262 ccgccacacccttcattccgttcaaccctagctgtcgtctcctgctccatcttccgttc 320  Q
    ||||| |||||||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  17224395 ccgccccacccttcattccgttcaaccctagccgccgtctcccgctccatcttccgttc 17224453  T

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Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 238 - 320
Target Start/End: Original strand, 25871893 - 25871975
Alignment:
Q  238 ttcattctgccaccaccattcattccgccacacccttcattccgttcaaccctagctgtcgtctcctgctccatcttccgttc 320  Q
    ||||||| ||||||||||||||||||| | |||||||||||| ||||||||||||  ||||||||||||||||||||||||||    
T  25871893 ttcattccgccaccaccattcattccgtcccacccttcattctgttcaaccctagtcgtcgtctcctgctccatcttccgttc 25871975  T

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Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 17224158 - 17224231
Alignment:
Q  25 gagcagtgataggtataccaccataggtggtaatacaccttataccacctttgtgtggcaatacaattaataat 98  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||    
T  17224158 gagcagtgataggtgtaccaccataggtggcaatacaccttataccacctttgtgtggcaacacaaataataat 17224231  T

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Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 25871695 - 25871769
Alignment:
Q  24 agagcagtgataggtataccaccataggtggtaatacaccttataccacctttgtgtggcaatacaattaataat 98  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||| || |||||||| |||| |||||||    
T  25871695 agagcagtgataggtgtaccaccataggtggcaatacaccttataccacccttttgtggcaacacaaataataat 25871769  T

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Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 19152052 - 19151977
Alignment:
Q  23 aagagcagtgataggtataccaccataggtggtaatacaccttataccacctttgtgtggcaatacaattaataat 98  Q
    |||||||||||||||| ||||||||||||||| | |||||||||||||||| || |||||||  |||| |||||||    
T  19152052 aagagcagtgataggtgtaccaccataggtggcactacaccttataccacccttatgtggcaccacaaataataat 19151977  T

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Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 23679109 - 23679036
Alignment:
Q  25 gagcagtgataggtataccaccataggtggtaatacaccttataccacctttgtgtggcaatacaattaataat 98  Q
    |||||||||||||| ||||||||||||||| | |||||||||||||||| || |||||||  |||| |||||||    
T  23679109 gagcagtgataggtgtaccaccataggtggcactacaccttataccacccttatgtggcaccacaaataataat 23679036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 25871838 - 25871895
Alignment:
Q  165 cgtaccctctctcatttcaattcattcggtggaaaatttttctttcttcaccctagttc 223  Q
    |||||||||||||||| ||||||||| |||||||| ||| |||||||||||||||||||    
T  25871838 cgtaccctctctcatt-caattcatttggtggaaattttctctttcttcaccctagttc 25871895  T

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Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 19151843 - 19151765
Alignment:
Q  238 ttcattctgccaccaccattcattccgccac-acccttcattccgttcaaccctagctgtcgtctcctgctccatcttcc 316  Q
    ||||||| ||| ||||||||||||| ||||| ||| |||||||| |||||||||||| | ||||||||| ||||||||||    
T  19151843 ttcattccgccgccaccattcattcagccaccaccattcattcc-ttcaaccctagccgccgtctcctgatccatcttcc 19151765  T

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Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 23678899 - 23678821
Alignment:
Q  238 ttcattctgccaccaccattcattccgccac-acccttcattccgttcaaccctagctgtcgtctcctgctccatcttcc 316  Q
    ||||||| ||| ||||||||||||| ||||| ||| |||||||| |||||||||||| | ||||||||| ||||||||||    
T  23678899 ttcattccgccgccaccattcattcagccaccaccattcattcc-ttcaaccctagccgccgtctcctgatccatcttcc 23678821  T

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Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 19151897 - 19151847
Alignment:
Q  167 taccctctctcatttcaattca-ttcggtggaaaatttttctttcttcacc 216  Q
    |||||||||||||||||||||| || | |||||||||| ||||||||||||    
T  19151897 taccctctctcatttcaattcattttgttggaaaatttctctttcttcacc 19151847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 23678953 - 23678903
Alignment:
Q  167 taccctctctcatttcaattca-ttcggtggaaaatttttctttcttcacc 216  Q
    |||||||||||||||||||||| || | |||||||||| ||||||||||||    
T  23678953 taccctctctcatttcaattcattttgttggaaaatttctctttcttcacc 23678903  T

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Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 38245656 - 38245596
Alignment:
Q  38 tataccaccataggtggtaatacaccttataccacctttgtgtggcaatacaattaataat 98  Q
    ||||||||| ||  ||| |||||||||| ||||||| |||||||||||||  |||||||||    
T  38245656 tataccaccgtacatggcaatacaccttgtaccacccttgtgtggcaatatcattaataat 38245596  T

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Target: chr7 (Bit Score: 79; Significance: 6e-37; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 159 - 283
Target Start/End: Original strand, 12103324 - 12103444
Alignment:
Q  159 tttagccgtaccctctctcatttcaattcattcggtggaaaatttttctttcttcaccctagttccatccattccccccttcattctgccaccaccattc 258  Q
    ||||||||||||||||||||||||||||||||| ||| ||| ||| ||||||   ||||||||||||| |||||||| |||||||| |||||||||||||    
T  12103324 tttagccgtaccctctctcatttcaattcattcagtgaaaattttctctttc---accctagttccattcattcccc-cttcattccgccaccaccattc 12103419  T
Q  259 attccgccacacccttcattccgtt 283  Q
    |||||||||||||||||||||||||    
T  12103420 attccgccacacccttcattccgtt 12103444  T

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Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 12103200 - 12103263
Alignment:
Q  35 aggtataccaccataggtggtaatacaccttataccacctttgtgtggcaatacaattaataat 98  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  12103200 aggtataccaccataggtggcaatacaccttataccacccttgtgtggcaatacaattaataat 12103263  T

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Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 41546039 - 41546112
Alignment:
Q  25 gagcagtgataggtataccaccataggtggtaatacaccttataccacctttgtgtggcaatacaattaataat 98  Q
    |||||||||||||| ||||||||||||||| | |||||||||||||||| || |||||||  |||| |||||||    
T  41546039 gagcagtgataggtgtaccaccataggtggcactacaccttataccacccttatgtggcaccacaaataataat 41546112  T

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Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 41546192 - 41546242
Alignment:
Q  167 taccctctctcatttcaattca-ttcggtggaaaatttttctttcttcacc 216  Q
    |||||||||||||||||||||| || | |||||||||| ||||||||||||    
T  41546192 taccctctctcatttcaattcattttgttggaaaatttctctttcttcacc 41546242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 205 - 320
Target Start/End: Original strand, 86386 - 86501
Alignment:
Q  205 tctttcttcaccctagttccatccattccccccttcattctgccaccaccattcattccgccac-acccttcattccgttcaaccctagctgtcgtctcc 303  Q
    |||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||| ||| ||||||  ||||||||||||| |||||||||    
T  86386 tctttcttcaccctagttccatccattccccc-ttcattccaccaccaccattcattccgccaccaccattcattttgttcaaccctagccgtcgtctcc 86484  T
Q  304 tgctccatcttccgttc 320  Q
    |||| ||||||||||||    
T  86485 tgcttcatcttccgttc 86501  T

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Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 14056304 - 14056230
Alignment:
Q  24 agagcagtgataggtataccaccataggtggtaatacaccttataccacctttgtgtggcaatacaattaataat 98  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| |||| |||||||    
T  14056304 agagcagtgataggtgtaccaccataggtggcaatacaccttataccacccttgtgtggcaacacaaataataat 14056230  T

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Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 14056094 - 14056021
Alignment:
Q  246 gccaccaccattcattccgccac-acccttcattccgttcaaccctagctgtcgtctcctgctccatcttccgt 318  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||    
T  14056094 gccaccactgttcattccgccaccaccattcattccgttcaaccctagccgccgtctcctgctccatcttccgt 14056021  T

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Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 55039335 - 55039410
Alignment:
Q  23 aagagcagtgataggtataccaccataggtggtaatacaccttataccacctttgtgtggcaatacaattaataat 98  Q
    |||||||||||||||| ||||||||||||||| | |||||||||||||||| || |||||||  |||| |||||||    
T  55039335 aagagcagtgataggtgtaccaccataggtggcactacaccttataccacccttatgtggcaccacaaataataat 55039410  T

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Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 55039490 - 55039540
Alignment:
Q  167 taccctctctcatttcaattca-ttcggtggaaaatttttctttcttcacc 216  Q
    |||||||||||||||||||||| || | |||||||||| ||||||||||||    
T  55039490 taccctctctcatttcaattcattttgttggaaaatttctctttcttcacc 55039540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 1501266 - 1501226
Alignment:
Q  33 ataggtataccaccataggtggtaatacaccttataccacc 73  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  1501266 ataggtataccaccataggtggcaatacaccttctaccacc 1501226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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