View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1946_high_89 (Length: 309)
Name: NF1946_high_89
Description: NF1946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1946_high_89 |
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Alignment Details
Target: chr2 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 37351591 - 37351739
Alignment:
| Q |
1 |
aatggttgcaataaagaccccgccatgtgcttaagcatttgaaacaggtaagcaccgaagaagaagaacactaacttcttcataaagttttttacttaaa |
100 |
Q |
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| T |
37351591 |
aatggttgcaataaagaccccgccatgtgcttaagcatttaaaacaggtaagcaccgaagaagaagaacactaacttcttcataaagttttttacttaaa |
37351690 |
T |
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| Q |
101 |
tattacactgctgtctacttgtctttcaccctctccaatatacaactaa |
149 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37351691 |
tattacactgctgtctacttgtctttcaccctctccaatatacaactaa |
37351739 |
T |
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