View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1946_low_166 (Length: 207)
Name: NF1946_low_166
Description: NF1946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1946_low_166 |
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Alignment Details
Target: chr3 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 17 - 188
Target Start/End: Original strand, 55174104 - 55174275
Alignment:
| Q |
17 |
aagtttgaataacgttcaaacctccatgtcttgccttatcaagaatgtctggccacgcctgaaaagtacaacatcaatcaatcttatgaatccatcattt |
116 |
Q |
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| T |
55174104 |
aagtttgaataacgttcaaacctccatgtcttgccttatcaagaatgtctggccacgcctgaaaagtacaacatcaatcaatcttatgaatccatcatct |
55174203 |
T |
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| Q |
117 |
gttgttgttatattattgtaatgatcatggatgtagtaattnnnnnnnnnnccatgaatgaattatacatca |
188 |
Q |
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| T |
55174204 |
gttgttattatattattgtaatgatcatggatgtagtgattaaataaaaaaccatgaatgaattatacatca |
55174275 |
T |
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