View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1946_low_24 (Length: 486)

Name: NF1946_low_24
Description: NF1946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1946_low_24
NF1946_low_24
[»] chr6 (17 HSPs)
chr6 (209-419)||(17951956-17952166)
chr6 (209-415)||(35175781-35175987)
chr6 (311-377)||(34343937-34344003)
chr6 (209-298)||(4641355-4641444)
chr6 (217-300)||(34345324-34345407)
chr6 (209-301)||(17950561-17950653)
chr6 (217-300)||(4289426-4289509)
chr6 (209-300)||(24662480-24662571)
chr6 (207-262)||(30639609-30639664)
chr6 (209-262)||(3018534-3018587)
chr6 (209-262)||(29077328-29077381)
chr6 (209-262)||(2968139-2968192)
chr6 (209-262)||(29112300-29112353)
chr6 (224-300)||(3018465-3018541)
chr6 (209-261)||(29114815-29114867)
chr6 (209-259)||(35174391-35174441)
chr6 (350-411)||(9398822-9398883)
[»] chr4 (36 HSPs)
chr4 (209-419)||(39921494-39921704)
chr4 (209-419)||(43779781-43779991)
chr4 (209-419)||(5484540-5484750)
chr4 (209-419)||(39083639-39083849)
chr4 (210-415)||(39189383-39189588)
chr4 (209-419)||(44994201-44994411)
chr4 (208-419)||(42880675-42880880)
chr4 (214-419)||(32652104-32652309)
chr4 (208-301)||(5486051-5486144)
chr4 (210-300)||(6999300-6999390)
chr4 (209-300)||(44558526-44558617)
chr4 (208-262)||(2350578-2350632)
chr4 (252-333)||(15450383-15450464)
chr4 (207-300)||(25995112-25995205)
chr4 (217-333)||(32653598-32653714)
chr4 (209-301)||(35997766-35997858)
chr4 (209-301)||(39923006-39923098)
chr4 (203-262)||(10762575-10762634)
chr4 (209-262)||(10372777-10372830)
chr4 (249-298)||(13451015-13451064)
chr4 (209-260)||(47941811-47941862)
chr4 (347-409)||(4519535-4519597)
chr4 (208-262)||(44794831-44794885)
chr4 (209-262)||(42879275-42879328)
chr4 (209-262)||(44992808-44992861)
chr4 (347-411)||(11255841-11255905)
chr4 (217-301)||(44792942-44793026)
chr4 (209-300)||(13450304-13450395)
chr4 (208-262)||(2828449-2828503)
chr4 (208-262)||(10371056-10371110)
chr4 (208-262)||(35996062-35996116)
chr4 (200-257)||(4520494-4520551)
chr4 (209-262)||(10767988-10768041)
chr4 (358-411)||(27382287-27382340)
chr4 (209-262)||(39085190-39085243)
chr4 (350-411)||(51012087-51012148)
[»] chr7 (30 HSPs)
chr7 (209-419)||(45463670-45463880)
chr7 (209-419)||(4322486-4322696)
chr7 (209-419)||(48303563-48303773)
chr7 (208-419)||(34690994-34691205)
chr7 (210-291)||(30109708-30109789)
chr7 (209-300)||(47341719-47341810)
chr7 (207-301)||(40785547-40785641)
chr7 (209-301)||(4321038-4321130)
chr7 (249-333)||(48302191-48302275)
chr7 (207-262)||(35344361-35344416)
chr7 (209-300)||(38613514-38613605)
chr7 (350-409)||(38613625-38613684)
chr7 (205-300)||(46812615-46812710)
chr7 (209-300)||(46996735-46996826)
chr7 (209-262)||(8423352-8423405)
chr7 (209-301)||(8421416-8421508)
chr7 (209-301)||(30108565-30108657)
chr7 (224-300)||(34785112-34785188)
chr7 (209-261)||(46994660-46994712)
chr7 (211-301)||(46810707-46810797)
chr7 (246-301)||(48704246-48704302)
chr7 (350-409)||(2167641-2167700)
chr7 (207-301)||(45465183-45465277)
chr7 (209-298)||(33038832-33038921)
chr7 (208-333)||(34692715-34692840)
chr7 (209-282)||(34784067-34784140)
chr7 (209-301)||(23955284-23955376)
chr7 (311-343)||(29996504-29996536)
chr7 (209-301)||(35342425-35342517)
chr7 (217-301)||(36762679-36762763)
[»] chr2 (23 HSPs)
chr2 (209-419)||(28246663-28246873)
chr2 (208-419)||(11022927-11023137)
chr2 (209-419)||(38148495-38148706)
chr2 (45-208)||(43140445-43140597)
chr2 (208-411)||(11315258-11315460)
chr2 (202-258)||(15372492-15372548)
chr2 (204-262)||(41706534-41706592)
chr2 (208-301)||(33192-33285)
chr2 (209-262)||(41180-41233)
chr2 (208-301)||(11021532-11021625)
chr2 (207-300)||(37417271-37417364)
chr2 (213-262)||(39560-39609)
chr2 (209-301)||(28248174-28248266)
chr2 (208-262)||(42880849-42880903)
chr2 (207-300)||(29909693-29909786)
chr2 (208-301)||(41708429-41708522)
chr2 (209-261)||(37418808-37418860)
chr2 (210-300)||(25619661-25619751)
chr2 (350-411)||(44709666-44709727)
chr2 (246-298)||(14387386-14387438)
chr2 (208-300)||(17948927-17949019)
chr2 (248-288)||(38150026-38150066)
chr2 (246-298)||(39664803-39664855)
[»] chr8 (24 HSPs)
chr8 (209-419)||(40020549-40020759)
chr8 (215-419)||(28433630-28433834)
chr8 (218-333)||(23811532-23811647)
chr8 (209-261)||(31201215-31201267)
chr8 (198-300)||(42897807-42897909)
chr8 (209-301)||(31199485-31199577)
chr8 (208-300)||(33160181-33160273)
chr8 (209-261)||(33748332-33748384)
chr8 (209-300)||(32822361-32822452)
chr8 (224-301)||(24526911-24526988)
chr8 (217-262)||(31823514-31823559)
chr8 (217-301)||(461184-461268)
chr8 (347-411)||(13108258-13108322)
chr8 (347-411)||(38547386-38547450)
chr8 (208-300)||(44620669-44620761)
chr8 (209-299)||(9186646-9186736)
chr8 (350-411)||(5036611-5036672)
chr8 (347-411)||(8609709-8609773)
chr8 (207-259)||(8654498-8654550)
chr8 (246-298)||(29239187-29239239)
chr8 (246-298)||(33762713-33762765)
chr8 (209-257)||(37526099-37526147)
chr8 (209-257)||(38882873-38882921)
chr8 (209-301)||(40019156-40019248)
[»] chr1 (27 HSPs)
chr1 (209-419)||(5783364-5783574)
chr1 (209-262)||(11152545-11152598)
chr1 (209-262)||(45379085-45379138)
chr1 (209-262)||(47269527-47269580)
chr1 (209-301)||(5784866-5784958)
chr1 (209-261)||(31803739-31803791)
chr1 (208-300)||(42134481-42134573)
chr1 (208-262)||(33685319-33685373)
chr1 (209-262)||(27940608-27940661)
chr1 (209-262)||(35478087-35478140)
chr1 (208-301)||(44157432-44157525)
chr1 (217-301)||(27952499-27952583)
chr1 (224-300)||(34041828-34041904)
chr1 (209-300)||(36895543-36895634)
chr1 (347-406)||(42134641-42134700)
chr1 (209-300)||(46638840-46638931)
chr1 (350-411)||(2869741-2869802)
chr1 (350-411)||(26225455-26225516)
chr1 (209-262)||(33679259-33679312)
chr1 (350-411)||(34778040-34778101)
chr1 (209-262)||(35480046-35480099)
chr1 (209-262)||(47264124-47264177)
chr1 (246-298)||(9121703-9121755)
chr1 (347-411)||(15104600-15104664)
chr1 (350-410)||(18183846-18183906)
chr1 (347-411)||(27087441-27087505)
chr1 (246-298)||(34776606-34776658)
[»] chr5 (17 HSPs)
chr5 (208-419)||(42620677-42620888)
chr5 (203-300)||(1344814-1344911)
chr5 (209-301)||(38596868-38596960)
chr5 (208-300)||(18728635-18728727)
chr5 (209-301)||(40330514-40330606)
chr5 (209-262)||(32835876-32835929)
chr5 (209-301)||(32089924-32090016)
chr5 (209-301)||(35291048-35291140)
chr5 (209-300)||(43318093-43318184)
chr5 (208-301)||(35395332-35395425)
chr5 (224-301)||(38176647-38176724)
chr5 (224-301)||(38203871-38203948)
chr5 (209-262)||(42619289-42619342)
chr5 (347-411)||(17574476-17574540)
chr5 (217-301)||(33257759-33257843)
chr5 (350-411)||(7268004-7268065)
chr5 (209-262)||(32087514-32087567)
[»] chr3 (34 HSPs)
chr3 (202-419)||(41944569-41944784)
chr3 (209-300)||(40963398-40963489)
chr3 (209-300)||(23774152-23774243)
chr3 (209-262)||(40508982-40509035)
chr3 (217-333)||(41946066-41946182)
chr3 (209-301)||(48635372-48635464)
chr3 (209-300)||(26447723-26447814)
chr3 (209-300)||(48633877-48633968)
chr3 (208-262)||(41021074-41021128)
chr3 (247-300)||(30501155-30501208)
chr3 (209-262)||(40508493-40508546)
chr3 (207-300)||(45257253-45257346)
chr3 (204-301)||(45897045-45897142)
chr3 (209-300)||(23888805-23888896)
chr3 (347-409)||(31887355-31887417)
chr3 (209-262)||(33850982-33851035)
chr3 (347-411)||(2226074-2226138)
chr3 (209-301)||(33111841-33111933)
chr3 (206-262)||(40998512-40998568)
chr3 (209-257)||(51454326-51454374)
chr3 (209-296)||(18430308-18430395)
chr3 (207-301)||(23887196-23887290)
chr3 (209-262)||(1847683-1847736)
chr3 (350-411)||(7884795-7884856)
chr3 (349-406)||(23888678-23888735)
chr3 (350-411)||(53190681-53190742)
chr3 (246-298)||(7883365-7883417)
chr3 (209-257)||(24382969-24383017)
chr3 (347-411)||(30599839-30599903)
chr3 (209-257)||(31887528-31887576)
chr3 (358-410)||(33113083-33113135)
chr3 (209-257)||(39641915-39641963)
chr3 (209-241)||(45898440-45898472)
chr3 (246-298)||(46609186-46609238)
[»] scaffold0477 (1 HSPs)
scaffold0477 (209-298)||(6669-6758)
[»] scaffold0006 (1 HSPs)
scaffold0006 (198-269)||(38309-38380)
[»] scaffold1454 (1 HSPs)
scaffold1454 (347-411)||(1421-1485)


Alignment Details
Target: chr6 (Bit Score: 183; Significance: 9e-99; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 209 - 419
Target Start/End: Complemental strand, 17952166 - 17951956
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatatt 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |     
T  17952166 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 17952067  T
Q  309 cgtcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatgg 408  Q
    | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17952066 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 17951967  T
Q  409 aaaatacgaaa 419  Q
    |||||||||||    
T  17951966 aaaatacgaaa 17951956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 209 - 415
Target Start/End: Complemental strand, 35175987 - 35175781
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatatt 308  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||  |     
T  35175987 gagtgaaccatcaatttcgtccttgaattttcagggatcggccaaattcgtctccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 35175888  T
Q  309 cgtcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatgg 408  Q
    | |||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35175887 catcaatttcgtccctccgtccaaaaggtctgatagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 35175788  T
Q  409 aaaatac 415  Q
    |||||||    
T  35175787 aaaatac 35175781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 311 - 377
Target Start/End: Original strand, 34343937 - 34344003
Alignment:
Q  311 tcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaag 377  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34343937 tcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaag 34344003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 4641355 - 4641444
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaattt 298  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||  ||||   |||||||||||  || |||||||||||    
T  4641355 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaattt 4641444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 34345407 - 34345324
Alignment:
Q  217 catcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||| || |||||||||||| ||  | ||| |||||| ||||||  ||||||||||||||||||||||||||||||||||||    
T  34345407 catcaacttggtccctgaatttgcactgatcgaccaaatccgtccctcaatttaatgaaatatcaaaatagtccctgaatttgt 34345324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 17950561 - 17950653
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    |||||||||||||||||| |||||||||||| | ||||||||||| ||||||||  ||||    ||||||||||  || ||||||||||||||    
T  17950561 gagtgaaccatcaatttcatccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 17950653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 4289426 - 4289509
Alignment:
Q  217 catcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||| || || ||||||||| ||  | |||| ||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  4289426 catcaacttggttcctgaatttgcactgatcggtcaaattcgtccctcaatttaatgaaatatcaaaatagtccctaaatttgt 4289509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 24662480 - 24662571
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    ||||||| |||||| ||||||| ||||||| || |  |  | ||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  24662480 gagtgaatcatcaacttcgtccttgaatttgcacgaatatgtcaaattcgtcccccaatttaacgaaatatcaaaatagtccatgaatttgt 24662571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 30639609 - 30639664
Alignment:
Q  207 aagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||||| |||||| |||||||||||||||||| |||||||||||||| |||||    
T  30639609 aagagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattagtccc 30639664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 3018587 - 3018534
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    |||||||||||||| |||||||||||||||||| | ||||||||| ||||||||    
T  3018587 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaacttcgtccc 3018534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 29077328 - 29077381
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||| |||||    
T  29077328 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccc 29077381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 2968139 - 2968192
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||||||||||||| |||||| |||||||| |||||  |||||||||||||    
T  2968139 gagtgaaccatcaatttagtccctcaattttcacgggtctcccaaattcgtccc 2968192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 29112300 - 29112353
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    |||||||||||||| || ||||||||||||||| | |||||||||||| |||||    
T  29112300 gagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccc 29112353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 300
Target Start/End: Complemental strand, 3018541 - 3018465
Alignment:
Q  224 ttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||||||||||||||| | ||||||||| ||||||||  ||||    ||||||||||  ||||||||||||||||    
T  3018541 ttcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 3018465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 29114867 - 29114815
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtcc 261  Q
    |||||||||||||| || ||||||||||||||| | |||||||||||| ||||    
T  29114867 gagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtcc 29114815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 35174391 - 35174441
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgt 259  Q
    ||||||| |||||| |||||||||||||||| | ||||||||||| |||||    
T  35174391 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgt 35174441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 411
Target Start/End: Original strand, 9398822 - 9398883
Alignment:
Q  350 tgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    ||||||| | ||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  9398822 tgtgttgtcctgtacacgtgtcaacaagacagccacgtgtacaaggactaaattgatggaaa 9398883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 179; Significance: 2e-96; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 209 - 419
Target Start/End: Original strand, 39921494 - 39921704
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatatt 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |     
T  39921494 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 39921593  T
Q  309 cgtcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatgg 408  Q
    | |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  39921594 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacatgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 39921693  T
Q  409 aaaatacgaaa 419  Q
    |||||||||||    
T  39921694 aaaatacgaaa 39921704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 209 - 419
Target Start/End: Complemental strand, 43779991 - 43779781
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatatt 308  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |     
T  43779991 gagtgaaccttcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 43779892  T
Q  309 cgtcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatgg 408  Q
    | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43779891 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 43779792  T
Q  409 aaaatacgaaa 419  Q
    |||||||||||    
T  43779791 aaaatacgaaa 43779781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 209 - 419
Target Start/End: Original strand, 5484540 - 5484750
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatatt 308  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |     
T  5484540 gagtgaaccatcaatttcgtccatgaatttttaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 5484639  T
Q  309 cgtcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatgg 408  Q
    | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5484640 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 5484739  T
Q  409 aaaatacgaaa 419  Q
    |||||||||||    
T  5484740 aaaatacgaaa 5484750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 209 - 419
Target Start/End: Original strand, 39083639 - 39083849
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatatt 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||  |     
T  39083639 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 39083738  T
Q  309 cgtcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatgg 408  Q
    | |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39083739 catcaatttcgtccctccgtccaaaaggtccgttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 39083838  T
Q  409 aaaatacgaaa 419  Q
    |||||||||||    
T  39083839 aaaatacgaaa 39083849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 210 - 415
Target Start/End: Original strand, 39189383 - 39189588
Alignment:
Q  210 agtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatattc 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  | |    
T  39189383 agtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtcc 39189482  T
Q  310 gtcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatgga 409  Q
     |||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39189483 atcaatttcgtccctccgtccaaaaggtccgttaatgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgga 39189582  T
Q  410 aaatac 415  Q
    ||||||    
T  39189583 aaatac 39189588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 209 - 419
Target Start/End: Complemental strand, 44994411 - 44994201
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatatt 308  Q
    ||||| || ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |     
T  44994411 gagtgtactatcaatttcatccctaaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 44994312  T
Q  309 cgtcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatgg 408  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  44994311 catcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagtcatgtgtacagggactaaattgatgg 44994212  T
Q  409 aaaatacgaaa 419  Q
    |||||||||||    
T  44994211 aaaatacgaaa 44994201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 208 - 419
Target Start/End: Complemental strand, 42880880 - 42880675
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatat 307  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |    
T  42880880 agagtgaaccatcaattttgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 42880781  T
Q  308 tcgtcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatg 407  Q
     | ||||||||||||||      |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42880780 ccatcaatttcgtccct------aaaaggtccgttagtgtgctgtgttgacttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatg 42880687  T
Q  408 gaaaatacgaaa 419  Q
    ||||||||||||    
T  42880686 gaaaatacgaaa 42880675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 214 - 419
Target Start/End: Original strand, 32652104 - 32652309
Alignment:
Q  214 aaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatattcgtca 313  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||  | | |||    
T  32652104 aaccatcaatttcgtcactgaattttcagggttcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttgtttgacgtccatca 32652203  T
Q  314 atttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaaat 413  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| ||||||||||||||||||||    
T  32652204 atttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttatacacgtgggaaaaaggaagccacgtgtacatggactaaattgatggaaaat 32652303  T
Q  414 acgaaa 419  Q
    ||||||    
T  32652304 acgaaa 32652309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 5486144 - 5486051
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  5486144 agagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcatccctaaatttaacgaaatatcaaaatagtccctgaatttgtt 5486051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 210 - 300
Target Start/End: Complemental strand, 6999390 - 6999300
Alignment:
Q  210 agtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||| |||||||||||||| ||||||| || |  ||||||||||||||||   ||||||||||||||||||||||||| ||||||||||    
T  6999390 agtgaatcatcaatttcgtccttgaatttgcacgaatcggccaaattcgtccttcaatttaatgaaatatcaaaatagtctctgaatttgt 6999300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 44558617 - 44558526
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||||| ||||  ||||    ||||||||||  ||||||||||||||||    
T  44558617 gagtgaaccatcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 44558526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 2350632 - 2350578
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||| |||||    
T  2350632 agagtgaaccatcaatttagtccctgaattttcatgggtcggccaaatttgtccc 2350578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 15450464 - 15450383
Alignment:
Q  252 aaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatattcgtcaatttcgtccctccatccaaa 333  Q
    ||||| |||||  ||||||| ||||||||||||||||||||||||||||   || ||||||||||| |||||||| ||||||    
T  15450464 aaatttgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtaaaatgttcgtcaattttgtccctccgtccaaa 15450383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 300
Target Start/End: Complemental strand, 25995205 - 25995112
Alignment:
Q  207 aagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    ||||||||| |||||| ||||||| | ||||| || |  |||||||||||  ||||| ||||||| |||||||||||||||| |||||||||||    
T  25995205 aagagtgaatcatcaacttcgtccataaatttgcacgaatcggccaaatttatcccccaatttaacgaaatatcaaaatagttcctgaatttgt 25995112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 217 - 333
Target Start/End: Complemental strand, 32653714 - 32653598
Alignment:
Q  217 catcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatattcgtcaatt 316  Q
    |||||| || || ||||||||| ||  | |||| |||||||||||   ||||||| |||||||||||||||| |||||||||||   || ||||||||||    
T  32653714 catcaacttggttcctgaatttgcactgatcggtcaaattcgtccttcaatttaacgaaatatcaaaatagtgcctgaatttgtaaaatgttcgtcaatt 32653615  T
Q  317 tcgtccctccatccaaa 333  Q
    | |||||||| ||||||    
T  32653614 ttgtccctccgtccaaa 32653598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 35997858 - 35997766
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||| |||||| || ||||||||||||||| ||||||||||||||||| ||  ||||  | ||||||||||  || ||||||||||||||    
T  35997858 gagtgaatcatcaactttgtccctgaattttcacgggtcggccaaattcgttcctcaattataagaaatatcaatttaatccctgaatttgtt 35997766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 39923098 - 39923006
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||||||||||||||||||||||||||| |  |||||||||| ||||||||  ||||    ||||||||||  || ||||||||||||||    
T  39923098 gagtgaaccatcaatttcgtccctgaatttttacaggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 39923006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 10762575 - 10762634
Alignment:
Q  203 aaataagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||| |||||||||||||| |||||||||||||||||| | |||||||||||| |||||    
T  10762575 aaatatgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccc 10762634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 10372830 - 10372777
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||| |||||    
T  10372830 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccc 10372777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 13451064 - 13451015
Alignment:
Q  249 gccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaattt 298  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||||||    
T  13451064 gccaaattcgtcccccaatttaacgaaatatcaaaatagtccttgaattt 13451015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 260
Target Start/End: Original strand, 47941811 - 47941862
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtc 260  Q
    ||||||||||||||||| ||||||||||||| | ||||||| ||||||||||    
T  47941811 gagtgaaccatcaatttagtccctgaatttttacgggtcggtcaaattcgtc 47941862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 409
Target Start/End: Original strand, 4519535 - 4519597
Alignment:
Q  347 tgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatgga 409  Q
    |||||||||| ||||||||||||| |||||||||| ||| ||| || ||||||| ||||||||    
T  4519535 tgctgtgttgtcttgtacacgtggcaaaaagaaagtcacgtgttcaaggactaatttgatgga 4519597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 44794885 - 44794831
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    |||||||||||||||||| |||||||||||||||   ||||| ||||||||||||    
T  44794885 agagtgaaccatcaatttagtccctgaattttcacacgtcggtcaaattcgtccc 44794831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 42879275 - 42879328
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||| |||||| |||||||||||||||| | ||||||||||| ||||||||    
T  42879275 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccc 42879328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 44992808 - 44992861
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||| |||||| |||||||||||||||| | ||||||||||| ||||||||    
T  44992808 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccc 44992861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 411
Target Start/End: Complemental strand, 11255905 - 11255841
Alignment:
Q  347 tgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    |||||||||| ||||||||||||  || |||  |||||| |||||| ||||||||||||||||||    
T  11255905 tgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 11255841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 301
Target Start/End: Original strand, 44792942 - 44793026
Alignment:
Q  217 catcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    |||||| || ||||||||||| ||| ||||||||||||||||||||  ||||    ||||||||||  || ||||||||||||||    
T  44792942 catcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 44793026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 13450395 - 13450304
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    ||||||| |||||| ||||||| ||||||| || |  |  | |||||| |||||| |||||||  |||||| ||||||||||||||||||||    
T  13450395 gagtgaatcatcaacttcgtccttgaatttgcacgaatatgtcaaatttgtcccccaatttaacaaaatatgaaaatagtccctgaatttgt 13450304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 2828503 - 2828449
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    |||||||| |||||| |||||||||||||||| | ||||||||||| || |||||    
T  2828503 agagtgaatcatcaacttcgtccctgaatttttatgggtcggccaactttgtccc 2828449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 10371056 - 10371110
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||||||||||| || ||||||||||||||| | |||||| ||||| |||||    
T  10371056 agagtgaaccatcaacttagtccctgaattttcacgcgtcggctaaattagtccc 10371110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 35996062 - 35996116
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    |||||||||||||||||| ||| ||| ||||| | ||||||| ||||||||||||    
T  35996062 agagtgaaccatcaatttagtctctggatttttatgggtcggtcaaattcgtccc 35996116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 257
Target Start/End: Complemental strand, 4520551 - 4520494
Alignment:
Q  200 ataaaataagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattc 257  Q
    |||||| ||||||||| |||||| ||||||| |||||||| | | |||||||||||||    
T  4520551 ataaaagaagagtgaatcatcaacttcgtccttgaatttttatgagtcggccaaattc 4520494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 10768041 - 10767988
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    |||||||||||||| || || |||||||||||| | |||||||||||| |||||    
T  10768041 gagtgaaccatcaagttagttcctgaattttcacgcgtcggccaaattagtccc 10767988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 411
Target Start/End: Original strand, 27382287 - 27382340
Alignment:
Q  358 cttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    ||||||||||||  || ||||||||||| |||||| ||||||| ||||||||||    
T  27382287 cttgtacacgtgtcaacaagaaagccacgtgtacaaggactaatttgatggaaa 27382340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 39085243 - 39085190
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||| |||||| |||||||||||||||| | ||||||| ||| ||||||||    
T  39085243 gagtgaatcatcaacttcgtccctgaatttttacgggtcggtcaacttcgtccc 39085190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 411
Target Start/End: Original strand, 51012087 - 51012148
Alignment:
Q  350 tgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    ||||||| ||||||||||||  || |||  |||||| |||||| ||||||||||||||||||    
T  51012087 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 51012148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 175; Significance: 5e-94; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 209 - 419
Target Start/End: Original strand, 45463670 - 45463880
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatatt 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||  |     
T  45463670 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 45463769  T
Q  309 cgtcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatgg 408  Q
    | |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  45463770 catcaatttcgtccctccgtccaaaaggtccgttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 45463869  T
Q  409 aaaatacgaaa 419  Q
    |||||||||||    
T  45463870 aaaatacgaaa 45463880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 209 - 419
Target Start/End: Complemental strand, 4322696 - 4322486
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatatt 308  Q
    |||| ||||||||||||||||||||||| ||||||| ||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| ||     
T  4322696 gagtaaaccatcaatttcgtccctgaatattcagggatcggccaaactcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacatc 4322597  T
Q  309 cgtcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatgg 408  Q
    | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  4322596 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagtcacgtgtacagggactaaattgatgg 4322497  T
Q  409 aaaatacgaaa 419  Q
    |||||||||||    
T  4322496 aaaatacgaaa 4322486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 209 - 419
Target Start/End: Complemental strand, 48303773 - 48303563
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatatt 308  Q
    |||| ||||||||||||||||||||||||||||| | |||| ||||| ||||| | |||||||  ||||||||||||||||||||||||| |||||  |     
T  48303773 gagtaaaccatcaatttcgtccctgaattttcagcgatcggtcaaatccgtcctctaatttaacaaaatatcaaaatagtccctgaatttatttgacgtc 48303674  T
Q  309 cgtcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatgg 408  Q
    | |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  48303673 catcaatttcgtccctccgtccaaaaggtctgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatag 48303574  T
Q  409 aaaatacgaaa 419  Q
    |||||||||||    
T  48303573 aaaatacgaaa 48303563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 208 - 419
Target Start/End: Original strand, 34690994 - 34691205
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatat 307  Q
    ||||| ||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||  |||||||||||||||| |||||||||| |||  |    
T  34690994 agagtaaaccatcaatttcatccctgaatttttagggatcggccaaattcgtccccaaatttaacaaaatatcaaaatagtctctgaatttgtctgacgt 34691093  T
Q  308 tcgtcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatg 407  Q
     | |||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||| || ||| ||||||| |||||||||| ||||||||||    
T  34691094 ccatcaatttcgtccctccatccaaaaggtatgttagtgtgttgtgttggcttgtacacgtggcaacaaggaagccacgtgtacagggattaaattgatg 34691193  T
Q  408 gaaaatacgaaa 419  Q
    ||||||||||||    
T  34691194 gaaaatacgaaa 34691205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 210 - 291
Target Start/End: Complemental strand, 30109789 - 30109708
Alignment:
Q  210 agtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccc 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30109789 agtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccc 30109708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 47341810 - 47341719
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||||| ||||  ||||    ||||||||||  ||||||||||||||||    
T  47341810 gagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 47341719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 207 - 301
Target Start/End: Complemental strand, 40785641 - 40785547
Alignment:
Q  207 aagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||||| |||||||||||||| |||||||||| ||||||||||||||| || |  ||||   |||||||||||  || ||||||||||||||    
T  40785641 aagagtgaatcatcaatttcgtccttgaattttcacgggtcggccaaattcatctctcaattatgtgaaatatcaatctaatccctgaatttgtt 40785547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 4321038 - 4321130
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| ||||||||  ||||    ||||||||||  || ||||||||||||||    
T  4321038 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgtt 4321130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 249 - 333
Target Start/End: Original strand, 48302191 - 48302275
Alignment:
Q  249 gccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatattcgtcaatttcgtccctccatccaaa 333  Q
    ||||||||||||||  ||||||| ||||||||||||||||| ||||||||||   || ||||||||||| |||| ||| ||||||    
T  48302191 gccaaattcgtccctcaatttaacgaaatatcaaaatagtctctgaatttgtaaaatgttcgtcaattttgtccttccgtccaaa 48302275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 35344416 - 35344361
Alignment:
Q  207 aagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||    
T  35344416 aagagtgaaccatcaatttagtccccgaattttcacgggtcagccaaattcgtccc 35344361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 38613605 - 38613514
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||||||||||| ||||||| | |||||||| ||||||||||||||| ||||  ||||    ||||||||||  ||||||||||||||||    
T  38613605 gagtgaaccatcaaattcgtccttcaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 38613514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 409
Target Start/End: Original strand, 38613625 - 38613684
Alignment:
Q  350 tgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatgga 409  Q
    ||||||| |||||||||||||||||||||||||||| ||| || ||||||| ||||||||    
T  38613625 tgtgttgtcttgtacacgtgggaaaaagaaagccacgtgttcaaggactaacttgatgga 38613684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 300
Target Start/End: Complemental strand, 46812710 - 46812615
Alignment:
Q  205 ataagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||||||||||||||| ||||||| |||||||| | | ||||||||||||| ||||  ||||   |||||||||||  |||||||| |||||||    
T  46812710 ataagagtgaaccatcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgt 46812615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 46996826 - 46996735
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||||||||||| |||||||||||||||||| | ||||||||| ||||||||  ||||    ||||||||||  ||||| ||||||||||    
T  46996826 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgt 46996735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 8423405 - 8423352
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||||||||||||| ||||||||||||||| ||||| |||||||| |||||    
T  8423405 gagtgaaccatcaatttagtccctgaattttcacgggtcagccaaatttgtccc 8423352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 8421416 - 8421508
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||| |||||| || ||||||||||| ||| ||||||||||||||||||||  ||||    ||||||||||  || ||||||||||||||    
T  8421416 gagtgaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 8421508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 30108565 - 30108657
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||| |||||| |||||||||||||||| | ||||||||||| ||||||||  ||||    ||||||||||  || ||||||||||||||    
T  30108565 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 30108657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 300
Target Start/End: Complemental strand, 34785188 - 34785112
Alignment:
Q  224 ttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||||||||||||  | |  ||||||||| |||||| | || |||| ||||||||||||||||||||||||||||    
T  34785188 ttcgtccctgaatttgtacgaatcggccaaagtcgtcctccaaattaacgaaatatcaaaatagtccctgaatttgt 34785112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 46994660 - 46994712
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtcc 261  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| |||||||    
T  46994660 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcc 46994712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 301
Target Start/End: Original strand, 46810707 - 46810797
Alignment:
Q  211 gtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||| |||||| |||||||||||||||||| || ||||||||||| |||||  ||||    ||||||||||  || ||||||||||||||    
T  46810707 gtgaatcatcaacttcgtccctgaattttcacggatcggccaaattagtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 46810797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 301
Target Start/End: Original strand, 48704246 - 48704302
Alignment:
Q  246 tcggccaaattcgtccccaaattt-aatgaaatatcaaaatagtccctgaatttgtt 301  Q
    |||||||||||||||||| | ||| || ||||||||||||||||||| |||||||||    
T  48704246 tcggccaaattcgtcccccagttttaacgaaatatcaaaatagtccccgaatttgtt 48704302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 409
Target Start/End: Original strand, 2167641 - 2167700
Alignment:
Q  350 tgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatgga 409  Q
    ||||||| ||||||||||||| ||||||||||||||  || || ||||||| ||||||||    
T  2167641 tgtgttgtcttgtacacgtggcaaaaagaaagccacgcgttcaaggactaatttgatgga 2167700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 301
Target Start/End: Complemental strand, 45465277 - 45465183
Alignment:
Q  207 aagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||||| |||||| ||||||| |||||||| | ||||||| ||| ||||||||  ||||    ||||||||||  || ||||||||||||||    
T  45465277 aagagtgaatcatcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 45465183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 298
Target Start/End: Complemental strand, 33038921 - 33038832
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaattt 298  Q
    ||||||| |||||| ||||||| |||||||| | ||||||| ||||||| ||||  ||||    ||||||||||  ||||||||||||||    
T  33038921 gagtgaatcatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaattt 33038832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 333
Target Start/End: Complemental strand, 34692840 - 34692715
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatat 307  Q
    |||||||| |||||| ||  || |||||||| ||  | |||| |||||| || ||  ||||||| ||||||| ||||||||||||||||||||   || |    
T  34692840 agagtgaatcatcaacttgatctctgaatttgcactgatcggtcaaatttgtacctcaatttaacgaaatatgaaaatagtccctgaatttgtaaaatgt 34692741  T
Q  308 tcgtcaatttcgtccctccatccaaa 333  Q
     | ||||||| |||||||| ||||||    
T  34692740 ccatcaattttgtccctccgtccaaa 34692715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 34784067 - 34784140
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaa 282  Q
    ||||||| |||||| ||||||| ||||||| || |  |||||||||||||||| | ||||||| ||||| ||||    
T  34784067 gagtgaatcatcaacttcgtccttgaatttgcacgaatcggccaaattcgtcctccaatttaacgaaatgtcaa 34784140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 23955376 - 23955284
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||| |||||| |||||| ||||||||| | || | |||||||||||||||  ||||   |||||||||||  || || |||||||||||    
T  23955376 gagtgaatcatcaacttcgtctctgaatttttatggattggccaaattcgtcccttaattatgtgaaatatcaatttaatctctgaatttgtt 23955284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 343
Target Start/End: Complemental strand, 29996536 - 29996504
Alignment:
Q  311 tcaatttcgtccctccatccaaaaggtccgtta 343  Q
    |||| ||||||||||||||||||||||||||||    
T  29996536 tcaaattcgtccctccatccaaaaggtccgtta 29996504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 35342425 - 35342517
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||| |||||| || ||||||||||| | | |||||||||||||| |||||  ||||    ||||||||||  || ||||||||||||||    
T  35342425 gagtgaatcatcaacttagtccctgaattattacgggtcggccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 35342517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 301
Target Start/End: Complemental strand, 36762763 - 36762679
Alignment:
Q  217 catcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    |||||| |||||||||||||||| | || ||||||||||| |||||  ||||   |||||||||||  ||  |||||||||||||    
T  36762763 catcaacttcgtccctgaatttttacggatcggccaaattagtccctcaattatgtgaaatatcaatttaacccctgaatttgtt 36762679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 171; Significance: 1e-91; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 209 - 419
Target Start/End: Original strand, 28246663 - 28246873
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatatt 308  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||  |     
T  28246663 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagttcctgaatttgtttgacgtc 28246762  T
Q  309 cgtcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatgg 408  Q
    | |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28246763 catcaatttcgtccctctgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 28246862  T
Q  409 aaaatacgaaa 419  Q
    |||||||||||    
T  28246863 aaaatacgaaa 28246873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 208 - 419
Target Start/End: Complemental strand, 11023137 - 11022927
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatat 307  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||  |    
T  11023137 agagggaaccatcaatttcgtccctgaattttcaggg-tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 11023039  T
Q  308 tcgtcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatg 407  Q
     | |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11023038 ccatcaattccgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatg 11022939  T
Q  408 gaaaatacgaaa 419  Q
    ||||||||||||    
T  11022938 gaaaatacgaaa 11022927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 209 - 419
Target Start/End: Original strand, 38148495 - 38148706
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcgg-ccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatat 307  Q
    |||| ||||||||||||||||||||||||||||| | |||| ||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||  |    
T  38148495 gagtaaaccatcaatttcgtccctgaattttcagagatcgggccaaatttgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 38148594  T
Q  308 tcgtcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatg 407  Q
     | |||||||||||| ||| ||||||||||| ||||||||| ||| ||||||||||||||| |||||||| ||||||| |||||||||||||||||||||    
T  38148595 ccatcaatttcgtccatccgtccaaaaggtctgttagtgtgttgtattggcttgtacacgtcggaaaaaggaagccacgtgtacagggactaaattgatg 38148694  T
Q  408 gaaaatacgaaa 419  Q
    ||||||| ||||    
T  38148695 gaaaatatgaaa 38148706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 45 - 208
Target Start/End: Complemental strand, 43140597 - 43140445
Alignment:
Q  45 ataaaatcttaatttaacatattaggttggtttggtgatacaaggaaagacacatccagaatggaaagtttacaagaatattgaacctatccttgnnnnn 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||          
T  43140597 ataaaatcttaatttaacatattaggttggtttggtgatacaaggaaagacacatccaggatggaaagtttacaagaatattcaacctatccttcttttt 43140498  T
Q  145 nnattcttctcgtaaatcctcatttctatgtaatgacatacaagatgtgacggatataaaataa 208  Q
      ||||||||||| |||||||          |||||||||||||||||||||||||||||||||    
T  43140497 ttattcttctcgt-aatcctc----------aatgacatacaagatgtgacggatataaaataa 43140445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 208 - 411
Target Start/End: Complemental strand, 11315460 - 11315258
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatat 307  Q
    |||||||| |||||| ||||||| | |||||| | |  |||||||||||||| ||| ||||||| |||||||||||||||| |||||||||||  ||  |    
T  11315460 agagtgaatcatcaacttcgtccttaaatttttatgaatcggccaaattcgttccctaatttaacgaaatatcaaaatagttcctgaatttgtcagacgt 11315361  T
Q  308 tcgtcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatg 407  Q
     | ||||  | |||||||| |||||| | || | ||   || ||||||| ||||||||||||  || ||| |||||||||||||| |||| || ||||||    
T  11315360 ccatcaaaatggtccctccgtccaaatgttctgcta-catgttgtgttgtcttgtacacgtgtcaacaaggaagccacatgtacaaggaccaatttgatg 11315262  T
Q  408 gaaa 411  Q
    ||||    
T  11315261 gaaa 11315258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 15372492 - 15372548
Alignment:
Q  202 aaaataagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcg 258  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  15372492 aaaatatgagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcg 15372548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 41706534 - 41706592
Alignment:
Q  204 aataagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    |||||||||||||||||||||| || |||||||||||| ||||||| ||||||||||||    
T  41706534 aataagagtgaaccatcaatttagttcctgaattttcacgggtcggtcaaattcgtccc 41706592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 33192 - 33285
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||| |||||||   ||||   |||||||||||  || ||||||||||||||    
T  33192 agagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgtgaaatatcaatttaatccctgaatttgtt 33285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 41233 - 41180
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||||||||||||    
T  41233 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattcgtccc 41180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 11021532 - 11021625
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||| ||||||||  ||||    ||||||||||  || ||||||||||||||    
T  11021532 agagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 11021625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 300
Target Start/End: Original strand, 37417271 - 37417364
Alignment:
Q  207 aagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||||||||||||  ||||||| |||||||||| ||||||||||||||| ||||  ||||    ||||||||||  ||||||||||||||||    
T  37417271 aagagtgaaccatcatattcgtccttgaattttcatgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 37417364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 39560 - 39609
Alignment:
Q  213 gaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||||||||| ||||||||||||| | ||||||||||||||||||||    
T  39560 gaaccatcaatttagtccctgaatttttacgggtcggccaaattcgtccc 39609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 28248266 - 28248174
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||| |||||| |||||||||||||||| | ||||||||||| ||||||||  ||||    ||||||||||  || ||||||||||||||    
T  28248266 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 28248174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 42880903 - 42880849
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    |||||||| |||||| |||||||||||||||| | ||||||| ||||||||||||    
T  42880903 agagtgaatcatcaacttcgtccctgaatttttacgggtcggtcaaattcgtccc 42880849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 207 - 300
Target Start/End: Complemental strand, 29909786 - 29909693
Alignment:
Q  207 aagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||||||||||||| || ||||||||||||||| | ||||||||| || |||||  ||||    ||||||||||  |||||||| |||||||    
T  29909786 aagagtgaaccatcaaatttgtccctgaattttcacgcgtcggccaactttgtccctcaattatgcgaaatatcaatttagtcccttaatttgt 29909693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 41708522 - 41708429
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    |||||||| |||||| || ||| ||||||| ||| ||||||||||||||||||||  ||||    ||||||||||  || ||||||||||||||    
T  41708522 agagtgaatcatcaacttagtctctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 41708429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 37418860 - 37418808
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtcc 261  Q
    ||||||| |||||| ||||| | |||||||||| |||||||||||||||||||    
T  37418860 gagtgaatcatcaacttcgtacttgaattttcacgggtcggccaaattcgtcc 37418808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 300
Target Start/End: Original strand, 25619661 - 25619751
Alignment:
Q  210 agtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    ||||||||||||| ||||||| |||||||| | ||||||| ||||||| ||||  ||||     |||||||||  ||||||||||||||||    
T  25619661 agtgaaccatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgt 25619751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 411
Target Start/End: Complemental strand, 44709727 - 44709666
Alignment:
Q  350 tgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    ||||||| ||||||||||||  || |||| | |||| |||||| ||||||||||||||||||    
T  44709727 tgtgttgtcttgtacacgtgtcaacaagacatccacgtgtacaaggactaaattgatggaaa 44709666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 14387386 - 14387438
Alignment:
Q  246 tcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaattt 298  Q
    |||||||| ||||||||  ||||| | ||||||||||| ||||||||||||||    
T  14387386 tcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 14387438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 17949019 - 17948927
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||||| |||||| ||||||| ||||||| || |  || |||||| ||||||||||||||   ||||||||||  | |||| |||||||||    
T  17949019 agagtgaatcatcaacttcgtccatgaatttgcaagcatcagccaaaatcgtccccaaattttgcgaaatatcaatttcgtccttgaatttgt 17948927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 38150066 - 38150026
Alignment:
Q  248 ggccaaattcgtccccaaatttaatgaaatatcaaaatagt 288  Q
    |||||||||||||||  ||||||| ||||||||||||||||    
T  38150066 ggccaaattcgtccctcaatttaacgaaatatcaaaatagt 38150026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 39664855 - 39664803
Alignment:
Q  246 tcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaattt 298  Q
    |||||||||||||||||| ||||| | |||||||| |  ||||||||||||||    
T  39664855 tcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattt 39664803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 167; Significance: 3e-89; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 209 - 419
Target Start/End: Complemental strand, 40020759 - 40020549
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatatt 308  Q
    |||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |     
T  40020759 gagtgaaccatcaatttcgtccctgaatctttaggggtctgccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 40020660  T
Q  309 cgtcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatgg 408  Q
    | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  40020659 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaaaccacgtgtacagggactaaattgatgg 40020560  T
Q  409 aaaatacgaaa 419  Q
    |||||||||||    
T  40020559 aaaatacgaaa 40020549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 215 - 419
Target Start/End: Complemental strand, 28433834 - 28433630
Alignment:
Q  215 accatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatattcgtcaa 314  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||  | | || |    
T  28433834 accatcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcga 28433735  T
Q  315 tttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaaata 414  Q
    |||||||||||| |||||||||| ||||||| || |||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  28433734 tttcgtccctccgtccaaaaggttcgttagtttgttgtgttggcttgtacacgtgggaaaaaggaagccacgtgtacatggactaaattgatggaaaata 28433635  T
Q  415 cgaaa 419  Q
    |||||    
T  28433634 cgaaa 28433630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 218 - 333
Target Start/End: Complemental strand, 23811647 - 23811532
Alignment:
Q  218 atcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatattcgtcaattt 317  Q
    ||||| ||||||||||||||  || || |||||||||||||||||| ||||| |  ||||||||||||||||| |||||||||   || |  ||||||||    
T  23811647 atcaacttcgtccctgaattcgcacggatcggccaaattcgtcccccaattttacaaaatatcaaaatagtccttgaatttgtaaaatgtcagtcaattt 23811548  T
Q  318 cgtccctccatccaaa 333  Q
    ||||||||| ||||||    
T  23811547 cgtccctccgtccaaa 23811532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 31201267 - 31201215
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtcc 261  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  31201267 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtcc 31201215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 198 - 300
Target Start/End: Complemental strand, 42897909 - 42897807
Alignment:
Q  198 atataaaataagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatt 297  Q
    |||||||||  |||||||||||||| | ||||| |||||||| | ||||||||||||||||||||  ||||   |||||||||||  |||||| ||||||    
T  42897909 atataaaatttgagtgaaccatcaaatccgtccttgaatttttacgggtcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatt 42897810  T
Q  298 tgt 300  Q
    |||    
T  42897809 tgt 42897807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 31199485 - 31199577
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||| |||||| || ||||||||||| ||| ||||||||||||||||||||  ||||    ||||||||||  || ||||||||||||||    
T  31199485 gagtgaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtcccttaattatgagaaatatcaatttaatccctgaatttgtt 31199577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 33160273 - 33160181
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    ||||| ||||||||| ||||||| ||||||||||  |||||||||||||| ||||  ||||   |||||||||||  ||||| ||||||||||    
T  33160273 agagtaaaccatcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaatttgt 33160181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 33748332 - 33748384
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtcc 261  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| |||||||    
T  33748332 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcc 33748384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 32822361 - 32822452
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||||||||||| ||||||| |||||||| | || |||||||||||| ||||  ||||   | |||||||||  ||||||||||||||||    
T  32822361 gagtgaaccatcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccctgaatttgt 32822452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 224 - 301
Target Start/End: Original strand, 24526911 - 24526988
Alignment:
Q  224 ttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||||||||||| || ||||||||||| ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  24526911 ttcgtccctgaatttacacgggtcggccaacttcgtccctcaattatgtgaaatatcaatttaatccctgaatttgtt 24526988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 31823559 - 31823514
Alignment:
Q  217 catcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||    
T  31823559 catcaacttcgtccctgaattttcacgggtcggccaacttcgtccc 31823514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 301
Target Start/End: Original strand, 461184 - 461268
Alignment:
Q  217 catcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    |||||| ||||||| |||||||||| ||||||||||||||| ||||  ||||   ||||||| |||  || ||||||||||||||    
T  461184 catcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgtgaaataacaatttaatccctgaatttgtt 461268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 411
Target Start/End: Complemental strand, 13108322 - 13108258
Alignment:
Q  347 tgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    |||||||||| ||||||||||||  || |||  |||||| |||||| ||||||||||||||||||    
T  13108322 tgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 13108258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 411
Target Start/End: Original strand, 38547386 - 38547450
Alignment:
Q  347 tgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    |||||||||| ||||||||||||  || |||  |||||| |||||| ||||||||||||||||||    
T  38547386 tgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 38547450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 44620761 - 44620669
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||||| |||||| ||||||||||||||| || |  |||| |||| ||||||||||||||    |||||||||  | ||||||||||||||    
T  44620761 agagtgaatcatcaacttcgtccctgaatttgcaagcatcggtcaaaatcgtccccaaattttgcaaaatatcaatttcgtccctgaatttgt 44620669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 299
Target Start/End: Complemental strand, 9186736 - 9186646
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttg 299  Q
    ||||||| |||||| | ||||| ||||||| || || || |||||| |||||||||||||    ||||||||||| |||||||| ||||||    
T  9186736 gagtgaatcatcaactccgtccttgaatttacaaggatcagccaaaatcgtccccaaattatgcgaaatatcaaattagtccctaaatttg 9186646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 411
Target Start/End: Original strand, 5036611 - 5036672
Alignment:
Q  350 tgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    ||||||| ||||||||||||  || |||  |||||| |||||| ||||||||||||||||||    
T  5036611 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 5036672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 411
Target Start/End: Complemental strand, 8609773 - 8609709
Alignment:
Q  347 tgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    |||||||||| ||||||||||||   | |||  |||||| |||||| ||||||||||||||||||    
T  8609773 tgctgtgttgtcttgtacacgtgtcgacaaggcagccacgtgtacaaggactaaattgatggaaa 8609709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 8654498 - 8654550
Alignment:
Q  207 aagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgt 259  Q
    ||||||||||||||||||| ||| ||||||||| | | ||||| |||||||||    
T  8654498 aagagtgaaccatcaatttagtctctgaatttttacgagtcggtcaaattcgt 8654550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 29239239 - 29239187
Alignment:
Q  246 tcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaattt 298  Q
    |||||||| |||||||| ||||||   ||||||||||| ||||||||||||||    
T  29239239 tcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 33762765 - 33762713
Alignment:
Q  246 tcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaattt 298  Q
    |||||||| ||||||||  ||||| | ||||||||||| ||||||||||||||    
T  33762765 tcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33762713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 37526147 - 37526099
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattc 257  Q
    |||||||||||||| ||||||| |||||||||| | ||||| |||||||    
T  37526147 gagtgaaccatcaaattcgtccttgaattttcacgcgtcggtcaaattc 37526099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 38882921 - 38882873
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattc 257  Q
    |||||||||||||| ||||||| |||||||||| || |||| |||||||    
T  38882921 gagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattc 38882873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 40019156 - 40019248
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||| |||||| ||||||  |||||||| | ||||||||||| ||||||||  ||||    ||||||||||  || ||||||||||||||    
T  40019156 gagtgaatcatcaacttcgtctttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 40019248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 163; Significance: 7e-87; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 209 - 419
Target Start/End: Original strand, 5783364 - 5783574
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatatt 308  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||||| ||||||||||||||||||||||||||||||||  |     
T  5783364 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcatctcccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 5783463  T
Q  309 cgtcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatgg 408  Q
    | |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5783464 catcaatttcgtccctccgtccaaaaggtccgttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 5783563  T
Q  409 aaaatacgaaa 419  Q
    |||||||||||    
T  5783564 aaaatacgaaa 5783574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 11152545 - 11152598
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| ||||||||    
T  11152545 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaatttcgtccc 11152598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 45379085 - 45379138
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| ||||||||    
T  45379085 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccc 45379138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 47269580 - 47269527
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||| |||||    
T  47269580 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccc 47269527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 5784958 - 5784866
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||| |||||| |||||||||||||||||| ||||||| ||| ||||||||  ||||    ||||||||||  || ||||||||||||||    
T  5784958 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 5784866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 31803791 - 31803739
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtcc 261  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| |||||||    
T  31803791 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcc 31803739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 42134481 - 42134573
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    ||||||||||||||| ||||||| |||||||| | |||||||||||| || ||||  ||||    ||||||||||  ||||||||||||||||    
T  42134481 agagtgaaccatcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 42134573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 33685373 - 33685319
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||||||||||| |||||||||||||||| | ||||||| ||||||| ||||    
T  33685373 agagtgaaccatcaaattcgtccctgaatttttacgggtcggtcaaattcatccc 33685319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 27940608 - 27940661
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||||||||||||| |||||||||||||||  ||| || ||||||||||||    
T  27940608 gagtgaaccatcaatttagtccctgaattttcacaggttggtcaaattcgtccc 27940661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 35478087 - 35478140
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||| |||||| ||| |||||||||||||| |||||||||||||| |||||    
T  35478087 gagtgaatcatcaacttcatccctgaattttcacgggtcggccaaattagtccc 35478140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 44157432 - 44157525
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    |||||||||||||||  |||||| | |||||||| ||||||||||||||| ||||  ||||     |||||||||  |||||||||||||||||    
T  44157432 agagtgaaccatcaaactcgtccttaaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtt 44157525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 301
Target Start/End: Complemental strand, 27952583 - 27952499
Alignment:
Q  217 catcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    |||||| || ||||||||||| ||| ||||||||||||||||||||  ||||    ||||||||||  || ||||||||||||||    
T  27952583 catcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 27952499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 300
Target Start/End: Complemental strand, 34041904 - 34041828
Alignment:
Q  224 ttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    ||||||||||||||| || |  | | |||||||||||||  ||||||| |||  |||||||||||||||||||||||    
T  34041904 ttcgtccctgaatttgcacgaatggaccaaattcgtccctcaatttaacgaataatcaaaatagtccctgaatttgt 34041828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 36895634 - 36895543
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||||||||||| || ||||||||||||||| | ||||| ||| |||||||   ||||    ||||||||||  ||||||||||||||||    
T  36895634 gagtgaaccatcaaatttgtccctgaattttcacgcgtcggtcaacttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgt 36895543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 406
Target Start/End: Original strand, 42134641 - 42134700
Alignment:
Q  347 tgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgat 406  Q
    |||||||||| ||||||||||||| || ||| ||||||||||| || ||||||| |||||    
T  42134641 tgctgtgttgtcttgtacacgtggcaagaaggaagccacatgttcaaggactaatttgat 42134700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 46638931 - 46638840
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||||||||||| ||||| |||||||||||| | ||||||||| ||| ||||  ||||    ||||||||||  |||||| |||||||||    
T  46638931 gagtgaaccatcaaattcgttcctgaattttcacgcgtcggccaacttcatccctcaattatgcgaaatatcaacttagtccttgaatttgt 46638840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 411
Target Start/End: Original strand, 2869741 - 2869802
Alignment:
Q  350 tgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    ||||||| | ||||||||||  || |||  ||||||||||||| ||||||||||||||||||    
T  2869741 tgtgttgtcctgtacacgtgtcaacaaggcagccacatgtacaaggactaaattgatggaaa 2869802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 411
Target Start/End: Complemental strand, 26225516 - 26225455
Alignment:
Q  350 tgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    ||||||| ||||||||||||  || ||   ||||||||||||| ||||||||||||||||||    
T  26225516 tgtgttgtcttgtacacgtgtcaacaaagcagccacatgtacaaggactaaattgatggaaa 26225455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 33679259 - 33679312
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||| ||||||||| |||| |||||||| | ||||| ||||||||||||||    
T  33679259 gagtgaatcatcaattttgtccatgaatttttacgggtcagccaaattcgtccc 33679312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 411
Target Start/End: Complemental strand, 34778101 - 34778040
Alignment:
Q  350 tgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    ||||||| ||||||||||||  || |||  |||||| |||||| ||||||||||||||||||    
T  34778101 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 34778040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 35480099 - 35480046
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    |||||||||||||| ||||||| |||||||||| || || ||||||||| ||||    
T  35480099 gagtgaaccatcaacttcgtccttgaattttcacggatcagccaaattcatccc 35480046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 47264124 - 47264177
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    |||||||||||||| || ||||||||||||||| | ||||||||| || |||||    
T  47264124 gagtgaaccatcaagttagtccctgaattttcacgcgtcggccaatttagtccc 47264177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 9121755 - 9121703
Alignment:
Q  246 tcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaattt 298  Q
    |||||||| |||||||| ||||||   ||||||||||| ||||||||||||||    
T  9121755 tcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 9121703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 411
Target Start/End: Original strand, 15104600 - 15104664
Alignment:
Q  347 tgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    |||||||||| ||||||||||||  || |||  |||||| |||||| ||||||| ||||||||||    
T  15104600 tgctgtgttgtcttgtacacgtgtcaataaggcagccacgtgtacaaggactaatttgatggaaa 15104664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 410
Target Start/End: Complemental strand, 18183906 - 18183846
Alignment:
Q  350 tgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaa 410  Q
    ||||||| ||||||||||||| |||||  ||||||| ||| || ||||||| |||||||||    
T  18183906 tgtgttgtcttgtacacgtggcaaaaaagaagccacgtgttcaaggactaatttgatggaa 18183846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 411
Target Start/End: Original strand, 27087441 - 27087505
Alignment:
Q  347 tgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    |||||||||| ||||||||||||  || |||  |||||| |||||| ||||| ||||||||||||    
T  27087441 tgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactgaattgatggaaa 27087505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 34776606 - 34776658
Alignment:
Q  246 tcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaattt 298  Q
    |||||||| ||||||||  ||||| | ||||||||||| ||||||||||||||    
T  34776606 tcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 148; Significance: 7e-78; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 208 - 419
Target Start/End: Complemental strand, 42620888 - 42620677
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatat 307  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||  |||||||||||||||| ||||||||||||||  |    
T  42620888 agagtcaaccatcaatttcatcccggaattttcaggggtcggccaaattcgtcccccaatttaaccaaatatcaaaatagtctctgaatttgtttgacgt 42620789  T
Q  308 tcgtcaatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatg 407  Q
     | |||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  42620788 ccatcaatttcatccctccgttcaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtatagggactaaattgatg 42620689  T
Q  408 gaaaatacgaaa 419  Q
    ||||||||||||    
T  42620688 gaaaatacgaaa 42620677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 203 - 300
Target Start/End: Complemental strand, 1344911 - 1344814
Alignment:
Q  203 aaataagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    ||||||||||||| |||||||||||||||||||||| || |  |||| |||||| |||||| ||||| | |||||||||||||||||| |||||||||    
T  1344911 aaataagagtgaatcatcaatttcgtccctgaatttgcatgaatcggtcaaatttgtcccccaattttacgaaatatcaaaatagtccttgaatttgt 1344814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 38596868 - 38596960
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    |||||||||||||| ||||||| |||||||| | ||||||||||||||||||||  ||||    ||||||||||  |||||||||||||||||    
T  38596868 gagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtt 38596960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 18728727 - 18728635
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    ||||||||||||||| ||||||||||||||||||   ||||||||| ||||||||  ||||    ||||||||||  ||||||||||||||||    
T  18728727 agagtgaaccatcaaattcgtccctgaattttcacttgtcggccaacttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgt 18728635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 40330606 - 40330514
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||| |||||| |||||||||||||||||| |||||||||||| |||||||  ||||    ||||||||||  || ||||||||||||||    
T  40330606 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaaatcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 40330514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 32835876 - 32835929
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||| |||||| |||||||||||||||||| ||||||| ||||||||||||    
T  32835876 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaaattcgtccc 32835929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 32090016 - 32089924
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||| |||||| |||||||||||||||| | ||||||||||| ||||||||  ||||    ||||||||||  || ||||||||||||||    
T  32090016 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 32089924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 35291048 - 35291140
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||| ||||||| ||||||||||||||||| || |||||||||||| ||||  || |   |||||||||||  || ||||||||||||||    
T  35291048 gagtgaatcatcaatgtcgtccctgaattttcacggttcggccaaattcatccctcaactatgtgaaatatcaatttaatccctgaatttgtt 35291140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 43318184 - 43318093
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||||||||||| ||||||| |||||||| | |||||||||||| || ||||  ||||    ||||||||||  ||||||||||||||||    
T  43318184 gagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 43318093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 35395332 - 35395425
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||||||||||| ||| ||||||||||||||   ||||||||| ||||||||  ||||    ||||||||||  |||| ||||||||||||    
T  35395332 agagtgaaccatcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgtt 35395425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 224 - 301
Target Start/End: Original strand, 38176647 - 38176724
Alignment:
Q  224 ttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    |||||||||||||||||| |||| |||||||||||||||  ||||    ||||||||||  || ||||||||||||||    
T  38176647 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgtt 38176724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 224 - 301
Target Start/End: Original strand, 38203871 - 38203948
Alignment:
Q  224 ttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    |||||||||||||||||| |||| |||||||||||||||  ||||    ||||||||||  || ||||||||||||||    
T  38203871 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgtt 38203948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 42619289 - 42619342
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||| |||||| |||||||||||||||||| ||||||| ||| ||||||||    
T  42619289 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaatttcgtccc 42619342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 411
Target Start/End: Original strand, 17574476 - 17574540
Alignment:
Q  347 tgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    |||||||||| ||||||||||||  || |||  |||||| |||||| ||||||||||||||||||    
T  17574476 tgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 17574540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 301
Target Start/End: Complemental strand, 33257843 - 33257759
Alignment:
Q  217 catcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    |||||| |||||||||||||||| | ||||||||||| ||||||||  ||||    ||||||||||  || ||||||||||||||    
T  33257843 catcaacttcgtccctgaatttttacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgtt 33257759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 411
Target Start/End: Original strand, 7268004 - 7268065
Alignment:
Q  350 tgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    ||||||| ||||||||||||  || |||  |||||| |||||| ||||||||||||||||||    
T  7268004 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 7268065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 32087514 - 32087567
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    |||||||||||||| |||||||||||||||||| | ||||  ||| ||||||||    
T  32087514 gagtgaaccatcaaattcgtccctgaattttcacgcgtcgatcaacttcgtccc 32087567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 7e-78; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 202 - 419
Target Start/End: Original strand, 41944569 - 41944784
Alignment:
Q  202 aaaataagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||    
T  41944569 aaaataagagtaaaccatcaatttcgtccctgaattttcagggatcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttttt 41944668  T
Q  302 tgatattcgtc--aatttcgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggacta 399  Q
    |||    ||||  |||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||    
T  41944669 tga----cgtcgaaatttcgtccttccgttcaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccgcgtgtacagggacta 41944764  T
Q  400 aattgatggaaaatacgaaa 419  Q
    ||||||||||||||||||||    
T  41944765 aattgatggaaaatacgaaa 41944784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 40963489 - 40963398
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    ||||||| |||||| ||||||||||||||| || |  |||| ||||||||| ||| ||||||| ||||||| ||||||||||||||||||||    
T  40963489 gagtgaatcatcaacttcgtccctgaatttgcatgaatcggtcaaattcgttccccaatttaacgaaatatgaaaatagtccctgaatttgt 40963398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 23774152 - 23774243
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||||||||||| ||||||| |||||||||| | ||||||||||||||||||  ||||    ||||||||||  ||||||||||||||||    
T  23774152 gagtgaaccatcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgt 23774243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 40509035 - 40508982
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||||||||||    
T  40509035 gagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcgtccc 40508982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 217 - 333
Target Start/End: Complemental strand, 41946182 - 41946066
Alignment:
Q  217 catcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtttgatattcgtcaatt 316  Q
    ||||||||| || ||||||||| ||  | |||| |||||| |||||  ||||||| |||||||||||||||||| |||||||||   || | ||||||||    
T  41946182 catcaatttggttcctgaatttgcactgatcggtcaaatttgtccctcaatttaacgaaatatcaaaatagtccatgaatttgtaaaatgtccgtcaatt 41946083  T
Q  317 tcgtccctccatccaaa 333  Q
    | |||||||| ||||||    
T  41946082 ttgtccctccgtccaaa 41946066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 48635464 - 48635372
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||| ||||||||||||||||||||||||| || |||| ||||||||||||  ||||    ||||||||||  || ||||||||||||||    
T  48635464 gagtgaatcatcaatttcgtccctgaattttcacggatcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgtt 48635372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 26447723 - 26447814
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    ||||||| |||||| ||||||||| ||||| || |  |||| ||||||||| ||  | ||||||||||||||||||||||| ||||||||||    
T  26447723 gagtgaatcatcaacttcgtccctaaatttgcacgaatcggtcaaattcgttcctcattttaatgaaatatcaaaatagtctctgaatttgt 26447814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 48633877 - 48633968
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||||||||||| ||||||| |||||||||| ||||||| |||||||||||   ||||    ||||||||||  ||||||||||||||||    
T  48633877 gagtgaaccatcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgt 48633968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 41021128 - 41021074
Alignment:
Q  208 agagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||||||||||| |||||||||||||||||| | |||||||||||| |||||    
T  41021128 agagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccc 41021074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 30501155 - 30501208
Alignment:
Q  247 cggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    ||||||||||||||||| ||||||| ||||||||||||||||  ||||||||||    
T  30501155 cggccaaattcgtcccccaatttaacgaaatatcaaaatagtttctgaatttgt 30501208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 40508493 - 40508546
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||| |||||| |||||||||||||||||| ||||||| ||||||||||||    
T  40508493 gagtgaatcatcaacttcgtccctgaattttcacgggtcggacaaattcgtccc 40508546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 207 - 300
Target Start/End: Complemental strand, 45257346 - 45257253
Alignment:
Q  207 aagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||||||||||||| ||||| | |||||||||| ||||||||||||||| ||||  ||||   | |||||||||  |||| |||||||||||    
T  45257346 aagagtgaaccatcaaattcgttcttgaattttcacgggtcggccaaattcatccctcaattatgtaaaatatcaacttagttcctgaatttgt 45257253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 204 - 301
Target Start/End: Original strand, 45897045 - 45897142
Alignment:
Q  204 aataagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    |||||||||||| |||||| ||||||| |||||||| | ||||||||||| ||||||||  ||||    ||||||||||  || ||||||||||||||    
T  45897045 aataagagtgaatcatcaacttcgtccttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 45897142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 23888896 - 23888805
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgt 300  Q
    |||||||||||||| ||||||||||||||||||   ||||||||| ||||||||  ||||    |||||||||   ||||||||||||||||    
T  23888896 gagtgaaccatcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgt 23888805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 409
Target Start/End: Complemental strand, 31887417 - 31887355
Alignment:
Q  347 tgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatgga 409  Q
    |||||||||| ||||||||||||| |||||| |||||| |||| || ||||||| ||||||||    
T  31887417 tgctgtgttgtcttgtacacgtggcaaaaaggaagccatatgttcaaggactaatttgatgga 31887355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 33850982 - 33851035
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||| |||||||||||| |||||||||||| ||||||| ||| ||||||||    
T  33850982 gagtgaatcatcaatttcgttcctgaattttcacgggtcggtcaacttcgtccc 33851035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 411
Target Start/End: Complemental strand, 2226138 - 2226074
Alignment:
Q  347 tgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    |||||||||| ||||||||||||  || |||  |||||| |||||| ||||||||||||||||||    
T  2226138 tgctgtgttgtcttgtacacgtgtcaacaaggtagccacgtgtacaaggactaaattgatggaaa 2226074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 33111841 - 33111933
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||| |||||| |||||||||||||||||| || |||| ||||||| ||||  ||||    ||||||||||  || ||||||||||||||    
T  33111841 gagtgaatcatcaacttcgtccctgaattttcacggctcggtcaaattcatccctcaattatgcgaaatatcaatttaatccctgaatttgtt 33111933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 40998512 - 40998568
Alignment:
Q  206 taagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||||||||||||| || ||||||||||||||| | ||||| |||||| |||||    
T  40998512 taagagtgaaccatcaagttagtccctgaattttcacgcgtcggtcaaattagtccc 40998568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 51454374 - 51454326
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattc 257  Q
    |||||||||||||| ||||||| |||||||||| || ||||||||||||    
T  51454374 gagtgaaccatcaaattcgtccttgaattttcacggatcggccaaattc 51454326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 296
Target Start/End: Complemental strand, 18430395 - 18430308
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaat 296  Q
    |||||||||||||| ||||||| |||||||| | ||||| ||||||||| ||||  ||||    ||||||||||  ||||||||||||    
T  18430395 gagtgaaccatcaaattcgtccttgaattttaacgggtcagccaaattcatccctcaattatgcgaaatatcaacttagtccctgaat 18430308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 301
Target Start/End: Original strand, 23887196 - 23887290
Alignment:
Q  207 aagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaatttgtt 301  Q
    ||||||||| |||||| ||||||| |||||||| | |||||||| || ||||||||  ||||    ||||||||||  || ||||||||||||||    
T  23887196 aagagtgaatcatcaacttcgtccttgaatttttatgggtcggctaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 23887290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 1847736 - 1847683
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 262  Q
    ||||||| |||||| || |||| |||||||||| ||||||||||||||| ||||    
T  1847736 gagtgaatcatcaaatttgtccttgaattttcacgggtcggccaaattcatccc 1847683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 411
Target Start/End: Complemental strand, 7884856 - 7884795
Alignment:
Q  350 tgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    ||||||| ||||||||||||  || |||  ||||||||||| | ||||||||||||||||||    
T  7884856 tgtgttgtcttgtacacgtgtcaacaaggcagccacatgtataaggactaaattgatggaaa 7884795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 406
Target Start/End: Complemental strand, 23888735 - 23888678
Alignment:
Q  349 ctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgat 406  Q
    |||||||| ||||||| ||||| || ||| ||||||||||| |||||||||| |||||    
T  23888735 ctgtgttgtcttgtacgcgtggcaagaaggaagccacatgttcagggactaatttgat 23888678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 411
Target Start/End: Complemental strand, 53190742 - 53190681
Alignment:
Q  350 tgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    ||||||| ||||||||||||  || |||  |||||| |||||| ||||||||||||||||||    
T  53190742 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 53190681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 7883365 - 7883417
Alignment:
Q  246 tcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaattt 298  Q
    |||||||| |||||||| ||||||  |||||||||||| |||| |||||||||    
T  7883365 tcggccaatttcgtccctaaattttgtgaaatatcaaattagttcctgaattt 7883417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 24383017 - 24382969
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattc 257  Q
    |||||||||||||| || |||| |||||||| | |||||||||||||||    
T  24383017 gagtgaaccatcaaattggtccttgaatttttacgggtcggccaaattc 24382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 411
Target Start/End: Complemental strand, 30599903 - 30599839
Alignment:
Q  347 tgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    |||||||||| ||||||||| ||  || |||  |||||| |||||| ||||||||||||||||||    
T  30599903 tgctgtgttgtcttgtacacatgtcaataaggcagccacgtgtacaaggactaaattgatggaaa 30599839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 31887576 - 31887528
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattc 257  Q
    |||||||||||||| ||||||| |||||||||| || |||| |||||||    
T  31887576 gagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattc 31887528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 410
Target Start/End: Complemental strand, 33113135 - 33113083
Alignment:
Q  358 cttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaa 410  Q
    ||||||||||||| |||||| ||||||| ||| || ||||||| |||||||||    
T  33113135 cttgtacacgtggcaaaaaggaagccacgtgttcaaggactaatttgatggaa 33113083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 39641963 - 39641915
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattc 257  Q
    |||||||||||||| || |||| |||||||| | |||||||||||||||    
T  39641963 gagtgaaccatcaaatttgtccttgaatttttacgggtcggccaaattc 39641915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 45898472 - 45898440
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttca 241  Q
    |||||||||||||| ||||||||||||||||||    
T  45898472 gagtgaaccatcaaattcgtccctgaattttca 45898440  T

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Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 46609186 - 46609238
Alignment:
Q  246 tcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaattt 298  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    
T  46609186 tcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattt 46609238  T

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Target: scaffold0477 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 209 - 298
Target Start/End: Complemental strand, 6758 - 6669
Alignment:
Q  209 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaatgaaatatcaaaatagtccctgaattt 298  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||  ||||   |||||||||||  || |||||||||||    
T  6758 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaattt 6669  T

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Target: scaffold0006 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 269
Target Start/End: Complemental strand, 38380 - 38309
Alignment:
Q  198 atataaaataagagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaattt 269  Q
    |||||||| ||||||||| |||||| ||||||||||||||| || |  ||  ||||| ||||||||||||||    
T  38380 atataaaaaaagagtgaatcatcaacttcgtccctgaatttgcaagcatcaaccaaaatcgtccccaaattt 38309  T

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Target: scaffold1454 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 411
Target Start/End: Original strand, 1421 - 1485
Alignment:
Q  347 tgctgtgttggcttgtacacgtgggaaaaagaaagccacatgtacagggactaaattgatggaaa 411  Q
    |||||||||| ||||||||||||  || |||  | |||| |||||| ||||||||||||||||||    
T  1421 tgctgtgttgtcttgtacacgtgtcaacaaggcaaccacgtgtacaaggactaaattgatggaaa 1485  T

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