View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19473_high_18 (Length: 239)
Name: NF19473_high_18
Description: NF19473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19473_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 8768127 - 8767899
Alignment:
| Q |
1 |
aaacaagagatacattcttctctgacatacgcccccaatatcgcctctactgttgttgttacctacttgaagaaattgagtaacacttgtaacacaatta |
100 |
Q |
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| T |
8768127 |
aaacaagggatacattcttctctcatatactcccccaatattgc-tctactgttgttgttacctacttgaagaaattgagtaacacttgtaacacaatta |
8768029 |
T |
|
| Q |
101 |
catctcc----aaagaaaaaatatatggctatataaacactctcaactcacttattagagttgtcaagnnnnnnntataaaacaagacaagggaagatgg |
196 |
Q |
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||||||| ||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||| |
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| T |
8768028 |
catctccaaaaaaaaaaaaaaaatatggctatataaacactctcaactcacttcttagagttgtcaagaaaaaaatacaaaacaagacaagggaagatgg |
8767929 |
T |
|
| Q |
197 |
attgcaaaatatctaataataatatcacag |
226 |
Q |
| |
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|||| |||||||||||||||||||||||| |
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| T |
8767928 |
gttgcgaaatatctaataataatatcacag |
8767899 |
T |
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