View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19473_high_8 (Length: 440)

Name: NF19473_high_8
Description: NF19473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19473_high_8
NF19473_high_8
[»] chr2 (22 HSPs)
chr2 (18-430)||(40262568-40262979)
chr2 (17-175)||(9293406-9293565)
chr2 (23-175)||(9723481-9723634)
chr2 (17-175)||(3989152-3989310)
chr2 (19-175)||(33380283-33380439)
chr2 (19-175)||(35160833-35160991)
chr2 (19-175)||(7475341-7475497)
chr2 (23-175)||(23267899-23268051)
chr2 (21-175)||(14941199-14941355)
chr2 (22-175)||(21936157-21936311)
chr2 (17-175)||(31174666-31174823)
chr2 (19-175)||(10661963-10662120)
chr2 (17-175)||(13354922-13355082)
chr2 (17-175)||(16767293-16767461)
chr2 (91-175)||(27847708-27847792)
chr2 (17-175)||(43330988-43331146)
chr2 (19-175)||(21393518-21393677)
chr2 (94-175)||(22591558-22591639)
chr2 (17-87)||(22592874-22592946)
chr2 (162-198)||(9293602-9293638)
chr2 (17-57)||(14941354-14941394)
chr2 (20-68)||(34320991-34321039)
[»] chr6 (19 HSPs)
chr6 (17-175)||(8515558-8515715)
chr6 (17-175)||(2309254-2309412)
chr6 (17-175)||(17175852-17176010)
chr6 (17-175)||(28675224-28675382)
chr6 (17-175)||(33696772-33696931)
chr6 (17-175)||(17705300-17705454)
chr6 (50-175)||(9752110-9752234)
chr6 (17-175)||(18365405-18365562)
chr6 (17-175)||(18370669-18370826)
chr6 (50-175)||(33695190-33695316)
chr6 (17-175)||(23290912-23291073)
chr6 (19-175)||(32702281-32702437)
chr6 (17-175)||(6031571-6031730)
chr6 (22-175)||(6127351-6127506)
chr6 (17-146)||(29693543-29693679)
chr6 (55-175)||(25987006-25987126)
chr6 (18-140)||(18889476-18889597)
chr6 (18-175)||(11548421-11548577)
chr6 (20-57)||(18889685-18889722)
[»] chr3 (34 HSPs)
chr3 (17-175)||(33145788-33145946)
chr3 (17-198)||(40327878-40328065)
chr3 (17-175)||(24343623-24343783)
chr3 (17-175)||(47738181-47738345)
chr3 (17-175)||(41883053-41883212)
chr3 (23-175)||(37522129-37522281)
chr3 (17-175)||(22426176-22426333)
chr3 (19-175)||(3137247-3137403)
chr3 (17-175)||(8320413-8320573)
chr3 (17-175)||(33113869-33114028)
chr3 (17-175)||(37216884-37217042)
chr3 (17-175)||(2754793-2754953)
chr3 (21-175)||(42297940-42298092)
chr3 (17-175)||(3456140-3456298)
chr3 (17-175)||(33839607-33839769)
chr3 (17-175)||(6041960-6042111)
chr3 (17-175)||(3574357-3574516)
chr3 (50-175)||(48160981-48161107)
chr3 (83-175)||(30385087-30385179)
chr3 (53-175)||(42297430-42297549)
chr3 (23-175)||(3089493-3089647)
chr3 (17-155)||(19650731-19650868)
chr3 (17-119)||(30385533-30385634)
chr3 (17-175)||(36864864-36865016)
chr3 (17-175)||(9796860-9797018)
chr3 (50-175)||(11347344-11347470)
chr3 (17-109)||(26612891-26612980)
chr3 (19-119)||(34482721-34482821)
chr3 (82-175)||(8361941-8362034)
chr3 (100-175)||(34482824-34482899)
chr3 (23-98)||(42921278-42921353)
chr3 (19-175)||(41224309-41224466)
chr3 (129-175)||(42921219-42921265)
chr3 (17-175)||(46918978-46919128)
[»] chr7 (24 HSPs)
chr7 (19-175)||(42696159-42696315)
chr7 (17-175)||(4974566-4974724)
chr7 (17-175)||(24395048-24395205)
chr7 (23-175)||(42611887-42612039)
chr7 (19-175)||(48880760-48880916)
chr7 (17-175)||(29737215-29737378)
chr7 (17-175)||(20009930-20010087)
chr7 (17-175)||(45637788-45637945)
chr7 (22-175)||(3962055-3962207)
chr7 (19-175)||(15329349-15329506)
chr7 (19-175)||(30848645-30848801)
chr7 (17-175)||(34482911-34483072)
chr7 (17-175)||(18037054-18037211)
chr7 (17-175)||(37476911-37477069)
chr7 (19-175)||(25167689-25167839)
chr7 (60-175)||(36790340-36790455)
chr7 (17-175)||(15577678-15577839)
chr7 (23-175)||(15238458-15238612)
chr7 (95-175)||(35444634-35444714)
chr7 (19-102)||(35445546-35445629)
chr7 (164-198)||(15238385-15238419)
chr7 (164-204)||(3961976-3962016)
chr7 (131-175)||(40880737-40880781)
chr7 (164-204)||(48880955-48880995)
[»] chr8 (35 HSPs)
chr8 (17-175)||(20091632-20091790)
chr8 (17-175)||(24844692-24844848)
chr8 (17-175)||(34665458-34665615)
chr8 (19-175)||(26041946-26042102)
chr8 (19-175)||(17841683-17841839)
chr8 (23-175)||(3596878-3597030)
chr8 (19-175)||(25581072-25581228)
chr8 (19-175)||(40779962-40780118)
chr8 (22-175)||(1645800-1645954)
chr8 (17-175)||(37985887-37986044)
chr8 (19-175)||(6108066-6108222)
chr8 (23-175)||(42754879-42755031)
chr8 (19-175)||(8453910-8454065)
chr8 (19-175)||(14128940-14129091)
chr8 (17-153)||(30055615-30055750)
chr8 (17-175)||(15187636-15187794)
chr8 (17-175)||(3890446-3890606)
chr8 (17-175)||(41819599-41819767)
chr8 (17-175)||(30834887-30835036)
chr8 (19-175)||(35353117-35353273)
chr8 (17-175)||(10044419-10044582)
chr8 (17-175)||(31347607-31347771)
chr8 (17-156)||(37132512-37132646)
chr8 (17-175)||(39772633-39772790)
chr8 (23-175)||(32064821-32064974)
chr8 (50-175)||(32393934-32394058)
chr8 (17-175)||(7022054-7022213)
chr8 (83-175)||(24211450-24211542)
chr8 (49-155)||(27835316-27835422)
chr8 (82-175)||(7017761-7017854)
chr8 (17-138)||(38017047-38017167)
chr8 (96-175)||(27782027-27782106)
chr8 (82-198)||(30797095-30797210)
chr8 (17-87)||(24211203-24211273)
chr8 (131-175)||(15972822-15972866)
[»] chr5 (23 HSPs)
chr5 (17-175)||(14138744-14138901)
chr5 (19-175)||(33584162-33584318)
chr5 (17-175)||(11360962-11361120)
chr5 (19-175)||(25398314-25398470)
chr5 (17-175)||(31640772-31640929)
chr5 (17-175)||(8145451-8145607)
chr5 (19-175)||(12850877-12851034)
chr5 (23-175)||(2477712-2477864)
chr5 (19-175)||(4892278-4892434)
chr5 (23-175)||(6043349-6043500)
chr5 (17-175)||(27481898-27482057)
chr5 (23-175)||(4433845-4433996)
chr5 (19-175)||(37321626-37321782)
chr5 (19-175)||(38899559-38899715)
chr5 (17-175)||(22912888-22913043)
chr5 (50-175)||(3362854-3362980)
chr5 (17-175)||(12614569-12614722)
chr5 (18-103)||(13664708-13664792)
chr5 (23-175)||(3521844-3521995)
chr5 (82-162)||(36880219-36880299)
chr5 (89-175)||(17545588-17545674)
chr5 (148-198)||(13664645-13664695)
chr5 (164-198)||(17545713-17545747)
[»] chr4 (31 HSPs)
chr4 (17-175)||(30563285-30563443)
chr4 (19-175)||(46441920-46442076)
chr4 (17-175)||(7744943-7745101)
chr4 (19-175)||(47290142-47290298)
chr4 (17-175)||(21802151-21802311)
chr4 (19-175)||(9088946-9089102)
chr4 (19-175)||(36073426-36073581)
chr4 (17-175)||(22199337-22199493)
chr4 (17-175)||(37934773-37934930)
chr4 (17-175)||(42671745-42671902)
chr4 (23-175)||(4751522-4751675)
chr4 (19-175)||(49387720-49387877)
chr4 (17-175)||(10442618-10442778)
chr4 (23-175)||(24128315-24128467)
chr4 (19-175)||(31078652-31078808)
chr4 (23-175)||(44893050-44893202)
chr4 (23-175)||(44893502-44893654)
chr4 (19-175)||(50156412-50156567)
chr4 (19-175)||(53123107-53123263)
chr4 (17-175)||(17655506-17655664)
chr4 (17-175)||(37219701-37219865)
chr4 (17-175)||(23964295-23964454)
chr4 (19-175)||(36073023-36073183)
chr4 (17-175)||(2624913-2625071)
chr4 (17-175)||(33530515-33530677)
chr4 (82-195)||(9111321-9111434)
chr4 (82-175)||(36073639-36073732)
chr4 (80-175)||(24392743-24392838)
chr4 (17-175)||(44744511-44744666)
chr4 (17-54)||(25063406-25063443)
chr4 (17-73)||(36073293-36073349)
[»] chr1 (27 HSPs)
chr1 (18-205)||(52329315-52329508)
chr1 (17-175)||(40215064-40215222)
chr1 (17-175)||(27523087-27523244)
chr1 (19-175)||(51737581-51737737)
chr1 (17-175)||(25463752-25463910)
chr1 (19-175)||(6883563-6883719)
chr1 (19-175)||(19015480-19015636)
chr1 (19-175)||(36966541-36966697)
chr1 (19-175)||(41876275-41876431)
chr1 (17-175)||(44690853-44691018)
chr1 (19-175)||(37821667-37821823)
chr1 (17-175)||(44094774-44094931)
chr1 (49-198)||(51620983-51621131)
chr1 (19-175)||(9910124-9910282)
chr1 (17-175)||(20304961-20305120)
chr1 (17-175)||(18404518-18404682)
chr1 (17-175)||(32000097-32000256)
chr1 (17-175)||(3559693-3559851)
chr1 (18-137)||(22157370-22157489)
chr1 (19-175)||(25973489-25973639)
chr1 (17-175)||(33786462-33786624)
chr1 (19-175)||(40273778-40273940)
chr1 (50-197)||(7335427-7335574)
chr1 (50-175)||(10167476-10167600)
chr1 (20-119)||(29202405-29202509)
chr1 (17-57)||(44691017-44691057)
chr1 (135-175)||(34519834-34519874)
[»] scaffold0096 (1 HSPs)
scaffold0096 (17-175)||(41087-41244)
[»] scaffold0085 (1 HSPs)
scaffold0085 (17-175)||(47926-48083)
[»] scaffold0471 (1 HSPs)
scaffold0471 (23-175)||(12918-13070)
[»] scaffold0228 (3 HSPs)
scaffold0228 (19-175)||(26012-26168)
scaffold0228 (19-175)||(16060-16216)
scaffold0228 (50-175)||(8478-8603)
[»] scaffold0204 (1 HSPs)
scaffold0204 (23-175)||(4472-4624)
[»] scaffold0178 (1 HSPs)
scaffold0178 (23-175)||(11697-11849)
[»] scaffold0665 (1 HSPs)
scaffold0665 (76-175)||(3144-3238)
[»] scaffold0041 (1 HSPs)
scaffold0041 (131-175)||(85502-85546)


Alignment Details
Target: chr2 (Bit Score: 302; Significance: 1e-170; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 18 - 430
Target Start/End: Original strand, 40262568 - 40262979
Alignment:
Q  18 gattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40262568 gattcaagaatgacatggtagaataataactcttagatttcagttttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatt 40262667  T
Q  118 tctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaattttttcttgatatatagcattgttcaaattaaaaataacct 217  Q
    || | ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||| ||||||||||    
T  40262668 tccggtcagggtgagattttattggctaatattaatttcgggacaatttcttgataaaatctttcttgatatataacattgttcaaatt-aaaataacct 40262766  T
Q  218 tttttcagtgtatctaatagtatgtaatattgttcatattggagtgtggttcatattttaataggatttaacaataaaattgacttaaggtgatgagaag 317  Q
    ||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  40262767 ttttttagtgtatctaatagtatgtaatattgttcatattggagcgcggttcatattttaataggatttaacaataacatttacttaaggtgatgagaag 40262866  T
Q  318 agggcgtttgatttagatgggtgatttttgggtgagtagcaagtagaagggggtttatgannnnnnnnnnnnnagtggccgtttgtgatggagtttgact 417  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||             || || |||||||||||||||||||||    
T  40262867 agggcgtttgatttagaggggtgatttttgggtgagtagcaagtagaagggggtttatgatttttgcttttttagcggtcgtttgtgatggagtttgact 40262966  T
Q  418 tgagtgatgatgt 430  Q
    | |||||||||||    
T  40262967 ttagtgatgatgt 40262979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 9293406 - 9293565
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa-tacataacacccaccaccccataa 115  Q
    ||||||||||||||||||  | |||||| || ||||||||||||||| |||| ||||  |||||||||||| ||| |||||||||||||||||||||| |    
T  9293406 agattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaatctttcataaaaaaaaaaatacataacacccaccaccccatga 9293505  T
Q  116 tttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||| |  |||| |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  9293506 tttccggccaggctgagattttattggctaacattaatttcaggacaatttcttgataaa 9293565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 9723634 - 9723481
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa-tacataacacccaccaccccataatttctg 121  Q
    ||||||||||||  |||||||| ||  ||||||||||||||||||| || || |||||||||||| ||| |||||||||||||||||||||| ||||| |    
T  9723634 aagaatgacatgacagaataatcacctttagatttcagtcttatttattcacttttcataaaaaaaaaaatacataacacccaccaccccatgatttccg 9723535  T
Q  122 atcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     | ||| |||||||||||| ||||| ||||||||||||||||||||||||||||    
T  9723534 gtgaggctgagattttattagctaacattaatttcgggacaatttcttgataaa 9723481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 3989310 - 3989152
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    |||| |||||||||||||  | |||||||||  |||||||||||||| |||| ||||  |||||||||||| ||||||||||||||||||||||||| ||    
T  3989310 agatccaagaatgacatgacacaataataacctttagatttcagtctcatttattaatctttcataaaaaaaaaatacataacacccaccaccccatgat 3989211  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||  |||||||||||||||||| |||||||||  ||| |||||||||||||    
T  3989210 ttccggccagactgagattttattggctaacattaatttcaagactatttcttgataaa 3989152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 33380439 - 33380283
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||| ||||| | ||||||||||||||||||||||| ||||    
T  33380439 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcattaaaaaaagatacataacacccaccaccccatgattt 33380340  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  33380339 ccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 33380283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 35160991 - 35160833
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa--tacataacacccaccaccccataat 116  Q
    ||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| |||  |||||||||||||||||||||| ||    
T  35160991 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaagatacataacacccaccaccccatgat 35160892  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  35160891 ttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 35160833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 7475341 - 7475497
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    |||||||||||| |||  | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||||||||| ||||    
T  7475341 attcaagaatgatatgacataataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccaccccatgattt 7475440  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  7475441 ccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 7475497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 23 - 175
Target Start/End: Original strand, 23267899 - 23268051
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctga 122  Q
    ||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||||||||| ||||| |     
T  23267899 aagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccaccccatgatttccgg 23267998  T
Q  123 tcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     |||  |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  23267999 ccagactgagattttattggttaacattaatttcaggactatttcttgataaa 23268051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 14941199 - 14941355
Alignment:
Q  21 tcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaa---aataaatacataacacccaccaccccataatt 117  Q
    ||||||||||||||  | |||||| |  ||||||||||| |||||||| ||||| ||||||||||   || ||||||||||||||||||||| ||| |||    
T  14941199 tcaagaatgacatgacacaataatcatccttagatttcaatcttatttattaacctttcataaaataaaaaaaatacataacacccaccacctcatgatt 14941298  T
Q  118 tctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||||  |||| |||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  14941299 tctggccaggctgagattt-attggctaacattaatttcaggacaatttcttgataaa 14941355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 175
Target Start/End: Complemental strand, 21936311 - 21936157
Alignment:
Q  22 caagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctg 121  Q
    |||||||||||||| | |||||| ||  |||||||||||| | |||| ||||  |||||||||||| ||||||||||||||||||||||||| ||||| |    
T  21936311 caagaatgacatggcacaataatcacctttagatttcagtttcatttattaatctttcataaaaaaaaaatacataacacccaccaccccatgatttccg 21936212  T
Q  122 atcagg-ttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
      |||| | ||||||||||||||||| |||||||||  ||| |||||||||||||    
T  21936211 gccaggctagagattttattggctaacattaatttcaagactatttcttgataaa 21936157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 31174666 - 31174823
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||  | |||||   |  |||||||||| ||| |||| ||||  |||||||||||| ||||||||||||||||||||||||| ||    
T  31174666 agattcaagaatgacatgacacaataaactcctttagatttcaatctcatttattaatctttcataaaaaa-aaatacataacacccaccaccccatgat 31174764  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| | ||||  |||||||||||||||||| ||||||||| |||| |||||||||||||    
T  31174765 ttccggtcagactgagattttattggctaacattaatttcaggactatttcttgataaa 31174823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 10662120 - 10661963
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataa-atacataacacccaccaccccataatt 117  Q
    ||||||||||||||||  | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| || |||||||||||||||||||| || |||    
T  10662120 attcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaagatacataacacccaccaccctatgatt 10662021  T
Q  118 tctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    || |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  10662020 tccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 10661963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 13355082 - 13354922
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataa-aaaataaatacataacacccaccaccccataa 115  Q
    |||| |||||||||||||| | |||||| ||| |||||||||||||| |||| ||||  |||||||| |||| |||||||||||||||||||| |||| |    
T  13355082 agatccaagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttcataaaaaaaaaaatacataacacccaccactccatga 13354983  T
Q  116 tttctgatcagg-ttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||| |  |||| | ||||||||||||||||| |||||||||  ||| |||||||||||||    
T  13354982 tttccggccaggctagagattttattggctaacattaatttcaagactatttcttgataaa 13354922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 16767293 - 16767461
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaa--------aataaa--tacataacacccacc 106  Q
    ||||||||||||||||||  | |||||| |||||||||||||||||| |||| ||||| ||||||||||        ||||||  |||||||||||||||    
T  16767293 agattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttcataaaataaaataaaataaaaatacataacacccacc 16767392  T
Q  107 accccataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||| || ||||| |  |||  |||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  16767393 accctatgatttccggccagactgagattttattggctaacattaatttcaggataatttcttgataaa 16767461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 91 - 175
Target Start/End: Complemental strand, 27847792 - 27847708
Alignment:
Q  91 atacataacacccaccaccccataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||||||||| |||| ||||||||| ||||||||| ||||||||    
T  27847792 atacataacacccaccaccccatgatttctggtcaggctgagattttattgactaacattaatttcaggacaattttttgataaa 27847708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 43331146 - 43330988
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcat--aaaaaataaatacataacacccaccaccccata 114  Q
    ||||||||||||||||||||| |||||| ||  |||||||||||||| |||| ||  | | ||||  |||||| |||||||||||||||||||||||||     
T  43331146 agattcaagaatgacatggtacaataatcacctttagatttcagtctcatttatt--cctctcataaaaaaaaaaaatacataacacccaccaccccatg 43331049  T
Q  115 atttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||||| |  | |   || |||||||||||||| ||||||||| | ||||||||||||||||    
T  43331048 atttccggcccgacagaaattttattggctaacattaatttcagtacaatttcttgataaa 43330988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 21393518 - 21393677
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaata-----aatacataacacccaccaccccat 113  Q
    ||||||||||||||||  | |||||| || |||| |||||||||| |||| ||  | |||||||||||| |     ||||||||||||||||||||||||    
T  21393518 attcaagaatgacatgacacaataatcacccttaaatttcagtctcatttatt--cctttcataaaaaaaataaaaaatacataacacccaccaccccat 21393615  T
Q  114 aatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     ||||| |  | |    |||||||||||| ||| ||||||||| | ||||||||||||||||    
T  21393616 gatttccggcccgacatagattttattggttaacattaatttcagtacaatttcttgataaa 21393677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 22591639 - 22591558
Alignment:
Q  94 cataacacccaccaccccataatttc-tgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||||| |||||||||||||| ||||| || | ||| |||||||||||||||||| ||||||||| |||||||||||| |||||    
T  22591639 cataatacccaccaccccatgatttcctgct-aggctgagattttattggctaacattaatttcaggacaatttcttaataaa 22591558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 22592946 - 22592874
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagattt--cagtcttatttgttaacgtttcataaaaaa 87  Q
    ||||||||||||||||||  | |||||| || |||||||||  ||||||||||| ||||| ||||||||||||    
T  22592946 agattcaagaatgacatgacacaataatcacccttagatttttcagtcttatttattaacctttcataaaaaa 22592874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 9293602 - 9293638
Alignment:
Q  162 aatttcttgataaattttttcttgatatatagcattg 198  Q
    |||||||||||||| | ||||||||||||||||||||    
T  9293602 aatttcttgataaaatctttcttgatatatagcattg 9293638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 14941394 - 14941354
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagattt 57  Q
    ||||||||||||||||||| |||||||| || |||||||||    
T  14941394 agattcaagaatgacatggcagaataatcacccttagattt 14941354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 34320991 - 34321039
Alignment:
Q  20 ttcaagaatgacatggtagaataataactcttagatttcagtcttattt 68  Q
    |||||||||||||||| | |||||| || ||||||||||||||| ||||    
T  34320991 ttcaagaatgacatggcacaataatcacccttagatttcagtctcattt 34321039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 7e-56; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 8515558 - 8515715
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||| || ||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||| |||||||||||| |||||||||||| ||    
T  8515558 agatttaaaaatgacatggtagaataatcactcttagatttcagtcttatttattaacatttcataaaaaa-aaatacataacatccaccaccccatgat 8515656  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  8515657 ttccgatcaggctgagattttattggctaacattaatttcgggacaatttcttgataaa 8515715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 2309254 - 2309412
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||| | |||||| || ||||||||||||||| |||| ||||| |||||||||||| ||||||||||||||||| ||||||| ||    
T  2309254 agattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcataaaaaaaaaatacataacacccacaaccccatgat 2309353  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  || | |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  2309354 ttccggccaagctgagattttattggctaacattaatttcaggacaatttcttgataaa 2309412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 17175852 - 17176010
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||||| |||||| ||  |||||||||||||| |||| ||||  |||||||||||| ||||||||||||||||||||||||| ||    
T  17175852 agattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaatacataacacccaccaccccatgat 17175951  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||| |||||||||||||||||| |||||||||  ||  |||||||||||||    
T  17175952 ttccggccaggctgagattttattggctaacattaatttcatgattatttcttgataaa 17176010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 28675382 - 28675224
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||  | |||||| || ||||||||||||||| |||| ||||| ||||||||| || ||||||||||| ||||||||||||| ||    
T  28675382 agattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacctttcataaataaaaaatacataacccccaccaccccatgat 28675283  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||| |||||||||||| ||||| ||||||||| ||||||||||||||||||    
T  28675282 ttccggccaggctgagattttattagctaacattaatttcaggacaatttcttgataaa 28675224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 33696931 - 33696772
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaat-acataacacccaccaccccataa 115  Q
    ||||| ||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| |||| ||||||||||||||||||||| |    
T  33696931 agatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaattacataacacccaccaccccatga 33696832  T
Q  116 tttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||| |  |||| |||||||||||||||||| ||||||||| |||| |||||||||||||    
T  33696831 tttccggccaggctgagattttattggctaacattaatttcaggactatttcttgataaa 33696772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 17705300 - 17705454
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||  | |||||| || ||||||||||||||| |||| ||||| |||||||||||||   |||||||||||||||| ||||| ||    
T  17705300 agattcaagaatgacatgacacaataatcac-cttagatttcagtctcatttattaacctttcataaaaaat---tacataacacccaccatcccatgat 17705395  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||  |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  17705396 ttccggccagactgagattttattggctaacattaatttcaggacaatttcttgataaa 17705454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 9752110 - 9752234
Alignment:
Q  50 ttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctgatcaggttgagattttattggctaatat 149  Q
    |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||| |||||||| ||||| |  |||| |||||||||||||||||| ||    
T  9752110 ttagatttcagtctcatttattaacctttcataaaaaa-aaatacataacacccatcaccccatgatttccggccaggctgagattttattggctaacat 9752208  T
Q  150 taatttcgggacaatttcttgataaa 175  Q
    ||||||| |||||||||||| |||||    
T  9752209 taatttcaggacaatttcttaataaa 9752234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 18365405 - 18365562
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    |||| |||||||||||| | | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| ||||||||||||||||| ||||||| ||    
T  18365405 agatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaa-aaatacataacacccactaccccatgat 18365503  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||| |||||||||||||||||| |||||||||  ||| |||||||||||||    
T  18365504 ttccggccaggatgagattttattggctaacattaatttcaagactatttcttgataaa 18365562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 18370669 - 18370826
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    |||| |||||||||||| | | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| ||||||||||||||||| ||||||| ||    
T  18370669 agatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaa-aaatacataacacccactaccccatgat 18370767  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||| |||||||||||||||||| |||||||||  ||| |||||||||||||    
T  18370768 ttccggccaggatgagattttattggctaacattaatttcaagactatttcttgataaa 18370826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 33695190 - 33695316
Alignment:
Q  50 ttagatttcagtcttatttgttaacgtttcataaaaaataaat-acataacacccaccaccccataatttctgatcaggttgagattttattggctaata 148  Q
    |||||||||||||| |||| ||||  |||||||||||| |||| ||||||||||||||||||||| ||||| |  |||| |||||||||||||||||| |    
T  33695190 ttagatttcagtctcatttattaatctttcataaaaaaaaaattacataacacccaccaccccatgatttccggccaggctgagattttattggctaaca 33695289  T
Q  149 ttaatttcgggacaatttcttgataaa 175  Q
    |||||||| |||| |||||||||||||    
T  33695290 ttaatttcaggactatttcttgataaa 33695316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 23290912 - 23291073
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaata---aatacataacacccaccaccccat 113  Q
    |||||||||||||| |||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| |   ||||||||||||||| ||||||||    
T  23290912 agattcaagaatgatatggcacaataattacctttagatttcagtctcatttattaatctttcataaaaaaaagaaaatacataacacccatcaccccat 23291011  T
Q  114 aatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     |||||||  |||| |||||||||||||| ||| ||||||||| | || |||||||||||||    
T  23291012 gatttctggccaggctgagattttattggttaacattaatttcagaactatttcttgataaa 23291073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 32702437 - 32702281
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||  | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | |||||||| |||||||||||||| ||||    
T  32702437 attcaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataagacccaccaccccatgattt 32702338  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |   ||  | |||||||||||| ||||||||||||| |||| |||||||||||||    
T  32702337 ccggctagactcagattttattggttaatattaatttcaggactatttcttgataaa 32702281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 6031571 - 6031730
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa-tacataacacccaccaccccataa 115  Q
    ||||| ||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  ||| |||||||| ||| |||||||||||||||||||||| |    
T  6031571 agatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttttataaaaaaaaaaatacataacacccaccaccccatga 6031670  T
Q  116 tttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||| |  |||| || ||||||||||| ||| |||||||||  ||| |||||||||||||    
T  6031671 tttccggccaggctgggattttattggttaacattaatttcaagactatttcttgataaa 6031730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 175
Target Start/End: Complemental strand, 6127506 - 6127351
Alignment:
Q  22 caagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcata-aaaaataaatacataacacccaccaccccataatttct 120  Q
    |||||||||||||| | |||||| ||| |||||||||||||| |||| ||||  ||||||| ||||| ||||||||||||||||||||||||| ||||||    
T  6127506 caagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttcatataaaaaaaaatacataacacccaccaccccatgatttct 6127407  T
Q  121 gatcaggttgagattttattggctaatattaa-tttcgggacaatttcttgataaa 175  Q
    |  ||   ||| |||||||||||||| ||||| ||||  ||| |||||||||||||    
T  6127406 ggccaaactgatattttattggctaacattaattttcaagactatttcttgataaa 6127351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 29693679 - 29693543
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaat-------aaatacataacacccaccacc 109  Q
    ||||| ||||||||||||| |||||||| || |||||||||||||||||||| ||| | |||||||||||||       |||||||||||| ||||||||    
T  29693679 agatttaagaatgacatggcagaataatgacccttagatttcagtcttatttattatcctttcataaaaaataaaaataaaatacataacatccaccacc 29693580  T
Q  110 ccataatttctgatcaggttgagattttattggctaa 146  Q
    |||| ||||| |  |||| ||||||||||||||||||    
T  29693579 ccatgatttccggccaggctgagattttattggctaa 29693543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 25987126 - 25987006
Alignment:
Q  55 tttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctgatcaggttgagattttattggctaatattaatt 154  Q
    ||||||||| ||||  |||  |||||||||||| | ||||||||||||||||||||||| ||||| |  |||  |||||||||||||| ||| |||||||    
T  25987126 tttcagtctcatttactaatctttcataaaaaaaagatacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatt 25987027  T
Q  155 tcgggacaatttcttgataaa 175  Q
    || |||| |||||||||||||    
T  25987026 tcaggactatttcttgataaa 25987006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 18889476 - 18889597
Alignment:
Q  18 gattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatt 117  Q
    |||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| |||||||||| |||||||||||||| |||    
T  18889476 gattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaa-aaatacataaaacccaccaccccatgatt 18889574  T
Q  118 tctgatcaggttgagattttatt 140  Q
    || |   ||| ||||||||||||    
T  18889575 tccggcaaggctgagattttatt 18889597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 11548421 - 11548577
Alignment:
Q  18 gattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaa--ataaatacataacacccaccaccccataa 115  Q
    |||||||||||||||||| | |||||| || ||||||||||||||| |||| ||  | |||||||||||  | |||||||||||||||| |||||||| |    
T  11548421 gattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt--cctttcataaaaaagaaaaatacataacaccca-caccccatga 11548517  T
Q  116 tttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||| |  | |   ||||||||||||||||| |||||| || | ||||||||||||||||    
T  11548518 tttccggcccgacagagattttattggctaacattaatatcagtacaatttcttgataaa 11548577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 18889722 - 18889685
Alignment:
Q  20 ttcaagaatgacatggtagaataataactcttagattt 57  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  18889722 ttcaagaatgacatggcagaataataacccttagattt 18889685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 1e-48; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 33145946 - 33145788
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||  | |||||| || |||||||||||||||||||| ||||| |||||||||||| ||||||||| ||||||||||| ||||||    
T  33145946 agattcaagaatgacatgacacaataatcacccttagatttcagtcttatttattaacctttcataaaaaaaaaatacataccacccaccacctcataat 33145847  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| | ||||| |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  33145846 ttccggtcaggctgagattttattggctaacattaatttcaggacaatttcttgataaa 33145788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 40328065 - 40327878
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaa-----ataaa-tacataacacccaccaccc 110  Q
    ||||||||||||||||||  | |||||| || |||||||||||||||||||| || || ||| |||||||     ||||| |||||||||||||||||||    
T  40328065 agattcaagaatgacatgacacaataatcacccttagatttcagtcttatttatttacctttgataaaaataaaaataaaatacataacacccaccaccc 40327966  T
Q  111 cataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaattttttcttgatatatagcattg 198  Q
     || ||||| |  ||||||||||||||||||||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||    
T  40327965 tatgatttccggccaggttgagattttattggctaacattaatttcaggacaatttcttgataaaatctttcttgatatatagcattg 40327878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 24343783 - 24343623
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa--tacataacacccaccaccccata 114  Q
    |||||||||||||||||| ||  ||||| || |||||||||||||||||||| ||||| ||||| |||||| |||  ||||||||||||||||||| ||     
T  24343783 agattcaagaatgacatgatatgataatcacccttagatttcagtcttatttattaacctttcaaaaaaaaaaaaaatacataacacccaccacccgatg 24343684  T
Q  115 atttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||||  | ||||| |||||||||||||||||| ||||||||||| ||||||||||||||||    
T  24343683 attttcggtcaggatgagattttattggctaacattaatttcggaacaatttcttgataaa 24343623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 47738345 - 47738181
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa------tacataacacccaccaccc 110  Q
    ||||||||||||||||||| | |||||| |  ||||||||||||||| |||| ||||| ||||||||||||||||      |||||||||||||||||||    
T  47738345 agattcaagaatgacatggcacaataatcatccttagatttcagtctcatttattaacctttcataaaaaataaaaaaaaatacataacacccaccaccc 47738246  T
Q  111 cataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| ||||||| ||||| |||||||||||||||||| ||||||||| ||||||||| || |||||    
T  47738245 catgatttctggtcaggctgagattttattggctaacattaatttcaggacaatttttttataaa 47738181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 41883053 - 41883212
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa-tacataacacccaccaccccataa 115  Q
    ||||||||||||||||||||| |||||| |   || |||||||||||||||| | ||| ||| |||||||| ||| |||||||||||||||||||||| |    
T  41883053 agattcaagaatgacatggtaaaataatcatctttggatttcagtcttatttatcaaccttttataaaaaaaaaaatacataacacccaccaccccatga 41883152  T
Q  116 tttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||||   |||  ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  41883153 tttctagccagtctgagattttattgactaacattaatttcgggacaatttcttgataaa 41883212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 37522281 - 37522129
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctga 122  Q
    ||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||||||||||||||| |     
T  37522281 aagaatgacatggcataataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccaccccataatttccgg 37522182  T
Q  123 tcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     ||||||||||||||||||| ||| |||||||||  ||| ||||||| |||||    
T  37522181 ccaggttgagattttattggttaacattaatttcatgactatttctttataaa 37522129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 22426176 - 22426333
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| ||||||||||||||||||||||||| ||    
T  22426176 agattcaagaatgacatggcacaataatcacatttagatttcagtctcatttattaatctttcataaaaaa-aaatacataacacccaccaccccatgat 22426274  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||  ||| |||||||||||||| |||||||||  ||| |||||||||||||    
T  22426275 ttccggccagactgaaattttattggctaacattaatttcaagactatttcttgataaa 22426333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 3137247 - 3137403
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  ||||||| |||| | |||||||||||||| |||||||| ||||    
T  3137247 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcatacaaaaaagatacataacacccatcaccccatgattt 3137346  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  3137347 ccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 3137403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 8320413 - 8320573
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa-tacataacacccaccacccc-ata 114  Q
    ||||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| ||| |||||||||||||| ||||| ||     
T  8320413 agattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaaatacataacacccactacccccatg 8320512  T
Q  115 atttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||||||  |||| |||||||||||||||||| |||||||||  ||| |||||||||||||    
T  8320513 atttctggccaggctgagattttattggctaacattaatttcaagactatttcttgataaa 8320573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 33114028 - 33113869
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa-tacataacacccaccaccccataa 115  Q
    ||||||||||||||||||| | |||||| ||  |||||||||| ||| |||| ||||  |||||||||||| ||| |||||||||||||||||||||| |    
T  33114028 agattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttcataaaaaaaaaaatacataacacccaccaccccatga 33113929  T
Q  116 tttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||| |  |||  ||| |||||||||||||| ||||||||| |||| |||||||||||||    
T  33113928 tttccggccagactgaaattttattggctaacattaatttcaggactatttcttgataaa 33113869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 37216884 - 37217042
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||||| |||||| ||  |||||||||||||| |||| ||||  |||||||||||| |||||||||||||||||||||| || ||    
T  37216884 agattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaatacataacacccaccaccctatgat 37216983  T
Q  117 ttctgatc-aggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    || | | | ||| |||||||||||||| ||| |||||||||  ||| |||||||||||||    
T  37216984 tt-tcagcaaggctgagattttattggttaacattaatttcatgactatttcttgataaa 37217042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 2754953 - 2754793
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa--tacataacacccaccaccccata 114  Q
    ||||| ||||||||||||| | |||||| ||  ||| |||||||||| |||| ||||  |||||||||||| |||  |||||||||||||| |||||||     
T  2754953 agatttaagaatgacatggcacaataatcacctttaaatttcagtctcatttattaatctttcataaaaaaaaaaaatacataacacccactaccccatg 2754854  T
Q  115 atttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||||| | ||||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  2754853 atttccggtcaggctgagattttattggttaacattaatttcaggactatttcttgataaa 2754793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 175
Target Start/End: Complemental strand, 42298092 - 42297940
Alignment:
Q  21 tcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttct 120  Q
    ||||||||||||||  | |||||  || ||||||||||||||| |||| ||||| ||||||||||||  ||||||||||| | |||||||||| |||||     
T  42298092 tcaagaatgacatgacacaataaccacccttagatttcagtctcatttattaacctttcataaaaaa--aatacataacatctaccaccccatgatttcc 42297995  T
Q  121 gatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |  |||  |||||||||||||||||| ||||||||| |||| |||||||||||||    
T  42297994 ggccagactgagattttattggctaacattaatttcaggactatttcttgataaa 42297940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 3456298 - 3456140
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||  | | |||| |   |||||||||||||| |||| ||||  |||||||||||| ||||||||||||||||||||||||| ||    
T  3456298 agattcaagaatgacatgacacactaatcatctttagatttcagtctcatttattaatctttcataaaaaaaaaatacataacacccaccaccccatgat 3456199  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||  |||||||||||||| ||| ||||||| | |||| |||||||||||||    
T  3456198 ttccggccagactgagattttattggttaacattaattccaggactatttcttgataaa 3456140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 33839769 - 33839607
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaat----aaatacataacacccaccacccca 112  Q
    ||||||||||||||||||  | |||||| || |||| |||||||||| |||| ||||| ||||||||||||     |||||||||||||| |||||||||    
T  33839769 agattcaagaatgacatgacacaataatcacccttaaatttcagtctcatttattaacctttcataaaaaaagaaaaaatacataacacctaccacccca 33839670  T
Q  113 taatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | ||||  |  ||| ||||||||||||||||||| |||||||||   ||||||||||||||||    
T  33839669 tgatttacggccagattgagattttattggctaacattaatttcaaaacaatttcttgataaa 33839607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 6042111 - 6041960
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    |||| |||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  ||||||||||||       |||||| |||||||||||| ||    
T  6042111 agatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatttttcataaaaaa-------ataacaaccaccaccccatgat 6042019  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| | ||||| |||||||||||||||||| ||||||||| |||| |||||||||||||    
T  6042018 ttccggtcaggctgagattttattggctaacattaatttcaggactatttcttgataaa 6041960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 3574357 - 3574516
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    |||| |||||||||||||  | |||||| ||   ||||||||||||| |||| ||||  |||||||||||| ||||||||||||||||||||||||| ||    
T  3574357 agatccaagaatgacatgacacaataatcacctctagatttcagtctcatttattaatctttcataaaaaaaaaatacataacacccaccaccccatgat 3574456  T
Q  117 ttctgatcaggttgagattttattggctaatattaa-tttcgggacaatttcttgataaa 175  Q
    ||| |  || | |||||||||||||||||| ||||| ||||  ||| |||||||||||||    
T  3574457 ttccggccaagctgagattttattggctaacattaattttcaagactatttcttgataaa 3574516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 48161107 - 48160981
Alignment:
Q  50 ttagatttcagtcttatttgttaacgtttcataaaaaataaa-tacataacacccaccaccccataatttctgatcaggttgagattttattggctaata 148  Q
    |||||||||||||| |||| ||||  |||||||||||| ||| ||||||||||||||||||||||  |||| |   ||| ||||||||||||||||||||    
T  48161107 ttagatttcagtctcatttattaatttttcataaaaaaaaaaatacataacacccaccaccccatggtttccggctaggctgagattttattggctaata 48161008  T
Q  149 ttaatttcgggacaatttcttgataaa 175  Q
    ||||||||  ||| |||||||||||||    
T  48161007 ttaatttcaagactatttcttgataaa 48160981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 30385179 - 30385087
Alignment:
Q  83 aaaaataaatacataacacccaccaccccataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||||||||||||||||||||||||||||||| ||||| |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  30385179 aaaaataaatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 30385087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 53 - 175
Target Start/End: Complemental strand, 42297549 - 42297430
Alignment:
Q  53 gatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctgatcaggttgagattttattggctaatattaa 152  Q
    ||||| ||||| |||| ||||| ||||||||||||   |||||||||| |||||||||||| ||||| | ||||| |||||||||||||||||| |||||    
T  42297549 gattttagtctcatttattaacctttcataaaaaa---atacataacatccaccaccccatgatttccggtcaggctgagattttattggctaacattaa 42297453  T
Q  153 tttcgggacaatttcttgataaa 175  Q
    |||| | || |||||||||||||    
T  42297452 tttcagaactatttcttgataaa 42297430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 3089647 - 3089493
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataa--atacataacacccaccaccccataatttct 120  Q
    ||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| ||  ||||||| ||||||||||||||| |||||     
T  3089647 aagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaataatacatagcacccaccaccccatgatttcc 3089548  T
Q  121 gatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |  || | |||||||||||||||||| |||||||||  ||  |||||||||||||    
T  3089547 ggccaagctgagattttattggctaacattaatttcaagaatatttcttgataaa 3089493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 19650731 - 19650868
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    |||| |||||||||||||  | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| ||||||||||||||||||||||||| ||    
T  19650731 agatccaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcataaaaaa-aaatacataacacccaccaccccatgat 19650829  T
Q  117 ttctgatcaggttgagattttattggctaatattaattt 155  Q
    ||| |  || | ||||||||||| |||||| ||||||||    
T  19650830 ttccggccaagctgagattttatcggctaacattaattt 19650868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 30385634 - 30385533
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  ||||||| |||||||||||||||||||||||||||||| ||    
T  30385634 agattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcata-aaaataaatacataacacccaccaccccatgat 30385536  T
Q  117 ttc 119  Q
    |||    
T  30385535 ttc 30385533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 36864864 - 36865016
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||  | |||||| || ||||||||||||||| |||| ||||| ||||||| |||  ||||||||||||||||||| ||||| ||    
T  36864864 agattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacatttcatataaa--aaatacataacacccaccatcccatgat 36864961  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||    | |  ||||||| |||||||||| ||||||||| |||| |||| ||||||||    
T  36864962 ttc----cggcctgagattctattggctaacattaatttcaggactattttttgataaa 36865016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 9796860 - 9797018
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaa--ataaatacataacacccaccaccccata 114  Q
    ||||||||||||||||||  | |||||| |||||||||||||||||| |||| ||  | |||||||||||  | |||||||||| ||||||||||||||     
T  9796860 agattcaagaatgacatgtcacaataatcactcttagatttcagtctcatttatt--cctttcataaaaaagaaaaatacataagacccaccaccccatg 9796957  T
Q  115 atttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||||  |  | |   ||||||||||||||||| ||||||||  | ||||||||||||||||    
T  9796958 attttcggcccgacagagattttattggctaacattaatttaagtacaatttcttgataaa 9797018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 11347470 - 11347344
Alignment:
Q  50 ttagatttcagtcttatttgttaacgtttcataaaaaataaa-tacataacacccaccaccccataatttctgatcaggttgagattttattggctaata 148  Q
    |||||||||| ||| |||| ||||  |||||||||||| ||| |||||||||||||||||||||| ||||||   ||   |||||||||||||||||| |    
T  11347470 ttagatttcaatctcatttattaatttttcataaaaaaaaaaatacataacacccaccaccccatgatttctagccactctgagattttattggctaaca 11347371  T
Q  149 ttaatttcgggacaatttcttgataaa 175  Q
    |||||||| |||| ||||| |||||||    
T  11347370 ttaatttcaggactatttcctgataaa 11347344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 26612980 - 26612891
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccacc 109  Q
    |||||||||||| |||||| | |||||| || ||||||||||||||| |||| ||||| ||||||||||   |||||||||||||||||||||    
T  26612980 agattcaagaataacatggcacaataatcacccttagatttcagtctcatttattaacctttcataaaa---aaatacataacacccaccacc 26612891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 34482721 - 34482821
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | |||||||| |||||||| ||||| ||||    
T  34482721 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataatacccaccatcccatgattt 34482820  T
Q  119 c 119  Q
    |    
T  34482821 c 34482821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 175
Target Start/End: Original strand, 8361941 - 8362034
Alignment:
Q  82 aaaaaataaatacataacacccaccaccccataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||||| |||||||| |||||||||||||||| ||||| |  | |   ||||||||||||||||| ||||||||| | ||||||||||||||||    
T  8361941 aaaaaaaaaatacatgacacccaccaccccatgatttccggcccgacagagattttattggctaacattaatttcagtacaatttcttgataaa 8362034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 175
Target Start/End: Original strand, 34482824 - 34482899
Alignment:
Q  100 acccaccaccccataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||||||||||||| ||||| |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  34482824 acccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 34482899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 42921353 - 42921278
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataa 98  Q
    ||||||||||||| | || ||| || |||| |||||||||| |||| ||||| |||||||||||| ||||||||||    
T  42921353 aagaatgacatggcacaacaatcacccttaaatttcagtctcatttattaacctttcataaaaaaaaaatacataa 42921278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 41224466 - 41224309
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa---tacataacacccaccaccccataa 115  Q
    ||||||||||||||||| | |||||| || |||| |||||| ||| |||| ||    |||||||||||| |||   |||||||||||||||||||||| |    
T  41224466 attcaagaatgacatggcacaataatcacccttaaatttcaatctcatttatttc--tttcataaaaaaaaaaaaatacataacacccaccaccccatga 41224369  T
Q  116 tttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||| || |     ||||||||||| ||||| |||||||||   |||||||||| |||||    
T  41224368 tttccgacccaacagagattttattagctaacattaatttcaatacaatttcttaataaa 41224309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 42921265 - 42921219
Alignment:
Q  129 tgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  42921265 tgagattttattggctaacattaaattcaggacaatttcttgataaa 42921219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 46919128 - 46918978
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    |||||||| |||||||||| |||||||| ||   |||||||| ||||||||| ||||  | |||||||   || ||| |||||| |||||||||||| ||    
T  46919128 agattcaataatgacatggcagaataatcacctctagatttcggtcttatttattaatctatcataaa---tatatatataacatccaccaccccatgat 46919032  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||    ||     | |||||||| ||||| |||||||||| |||||||||||||||||    
T  46919031 ttccagcca-----acattttatttgctaacattaatttcgagacaatttcttgataaa 46918978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 4e-45; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 42696315 - 42696159
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||||| |||||| || ||||||||||||||| |||| ||||| |||||||||||| |||||||||||| |||||||||| | ||||    
T  42696315 attcaagaatgacatggtacaataatcacccttagatttcagtctcatttattaacttttcataaaaaaaaaatacataacatccaccaccccttgattt 42696216  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||||||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  42696215 ccggccaggttgagattttattgactaacattaatttcaggacaatttcttgataaa 42696159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 4974566 - 4974724
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||| | |||||| || ||||||||||||||| |||| ||||| |||||||||||| ||||||||||||||||||||| ||| ||    
T  4974566 agattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcataaaaaaaaaatacataacacccaccacctcatgat 4974665  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  ||   |||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  4974666 ttccggccaaactgagattttattggctaacattaatttcaggataatttcttgataaa 4974724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 24395205 - 24395048
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  ||||||||||| |||||||||||||||||||||||||| ||    
T  24395205 agattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaa-taaatacataacacccaccaccccatgat 24395107  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  ||||||||||||||||||||||| ||||||||| | || |||| ||||||||    
T  24395106 ttccggccaggttgagattttattggctaacattaatttcagaactattttttgataaa 24395048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 42612039 - 42611887
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctga 122  Q
    ||||||||||||| | |||||| ||  ||||||||||||||||||| ||||  |||||||||||| ||||||||||||||||||||||||| ||||| |     
T  42612039 aagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttcataaaaaaaaaatacataacacccaccaccccatgatttccgg 42611940  T
Q  123 tcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||||  ||| |||||||||||||| |||||||||  ||| |||||||||||||    
T  42611939 tcagactgaaattttattggctaacattaatttcaagactatttcttgataaa 42611887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 48880760 - 48880916
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| ||  |||||||||||| | |||| ||||  |||||||||||| | ||||||||||||||||||||||| ||||    
T  48880760 attcaagaatgacatggcacaataatcacatttagatttcagtttcatttattaatctttcataaaaaaaagatacataacacccaccaccccatgattt 48880859  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  48880860 ccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 48880916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 29737378 - 29737215
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcata-----aaaaataaatacataacacccaccacccc 111  Q
    ||||| |||||| |||||  | |||||| || ||||||||||||||| |||| ||||| |||||||     ||||| ||||||||||| ||||| |||||    
T  29737378 agatttaagaataacatgtcacaataatcacccttagatttcagtctcatttattaacctttcatagaaagaaaaaaaaatacataactcccactacccc 29737279  T
Q  112 ataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    || ||||| | |||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  29737278 atgatttccggtcaggttgagattttattggctaacattaatttcgggacaatttcttaataaa 29737215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 20009930 - 20010087
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||  | |||||| |  ||||||||| ||||| |||| ||||| ||| |||| ||| ||||||||||||||||  ||||||||||    
T  20009930 agattcaagaatgacatgacacaataatcatacttagattttagtctcatttattaacctttaataagaaa-aaatacataacacccataaccccataat 20010028  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  ||||||||||||||||||||||| ||||||||| ||||||||| ||||||||    
T  20010029 ttccggccaggttgagattttattggctaacattaatttcaggacaattttttgataaa 20010087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 45637945 - 45637788
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| |||||||||||| |||||||||||| ||    
T  45637945 agattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaa-aaatacataacatccaccaccccatgat 45637847  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||  |||||||||||||||||  ||||||||| |||| |||||||||||||    
T  45637846 ttccggccagactgagattttattggctagcattaatttcaggactatttcttgataaa 45637788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 175
Target Start/End: Complemental strand, 3962207 - 3962055
Alignment:
Q  22 caagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctg 121  Q
    |||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| ||||||||||||||||||||||||| ||||| |    
T  3962207 caagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaa-aaatacataacacccaccaccccatgatttccg 3962109  T
Q  122 atcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
      || | |||||||||||||||||| |||||||||  ||| |||||||||||||    
T  3962108 gccaagctgagattttattggctaacattaatttcaagactatttcttgataaa 3962055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 15329506 - 15329349
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaat-aaatacataacacccaccaccccataatt 117  Q
    ||||||||||||||||| | |||||| ||| |||||||||||||| |||| ||||  ||||||||||||| ||| | ||||||| ||||||||||| |||    
T  15329506 attcaagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttcataaaaaataaaaaaaataacactcaccaccccatgatt 15329407  T
Q  118 tctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    || |  |||  ||||||||||||| |||| |||||||||  ||| |||||||||||||    
T  15329406 tccggccagtctgagattttattgactaacattaatttcaagactatttcttgataaa 15329349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 30848801 - 30848645
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| ||  ||| |||||||||| |||| ||||  |||||||||||| | ||||||||||||||| | ||||| ||||    
T  30848801 attcaagaatgacatggcacaataatcacctttaaatttcagtctcatttattaatctttcataaaaaaaagatacataacacccactatcccatgattt 30848702  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||  |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  30848701 ccggccagactgagattttattggttaacattaatttcaggactatttcttgataaa 30848645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 34483072 - 34482911
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaa----ataaatacataacacccaccacccca 112  Q
    ||||||||||||||||||| | |||||| ||  |||||||||| ||| |||| ||||  |||||||||||    | |||||||||||||||||||||| |    
T  34483072 agattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttcataaaaataaaaaaaatacataacacccaccaccc-a 34482974  T
Q  113 taatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | ||||| |  |||  |||||||||||||||||| ||||||||| |||| |||||||||||||    
T  34482973 tgatttccggccagactgagattttattggctaacattaatttcaggactatttcttgataaa 34482911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 18037211 - 18037054
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa-tacataacacccaccaccccataa 115  Q
    ||||| ||||||||||||||| |||||| || ||||||||||||||  |||| ||  | | |||||||||| ||| |||||||||||||||||||||| |    
T  18037211 agatttaagaatgacatggtacaataatcacccttagatttcagtcacatttatt--cctctcataaaaaaaaaaatacataacacccaccaccccatga 18037114  T
Q  116 tttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||||||  | |   ||||||||||||||||| ||||||||| | ||||||| ||||||||    
T  18037113 tttctggcccgacagagattttattggctaacattaatttcagtacaattttttgataaa 18037054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 37476911 - 37477069
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||| || |||||||||| | |||||| || ||||||||||||||| |||| || |  ||  | | |||| ||||||||||||||||||||||||| ||    
T  37476911 agatttaataatgacatggcacaataatcacccttagatttcagtctcatttattcattttatacagaaaaaaaatacataacacccaccaccccatgat 37477010  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  | |   ||||||||||||||||| ||||||||| | ||||||||||||||||    
T  37477011 ttccggcccgacagagattttattggctaacattaatttcagtacaatttcttgataaa 37477069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 25167689 - 25167839
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| ||  |||||||||||||| |      ||  |||||||||||| | |||||||||||||| |||||||| ||||    
T  25167689 attcaagaatgacatggcacaataatcacctttagatttcagtctca------aatctttcataaaaaaaagatacataacacccatcaccccatgattt 25167782  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||  |||||||||||||| ||| ||||||||| | || |||||||||||||    
T  25167783 ccggccagactgagattttattggttaacattaatttcagaactatttcttgataaa 25167839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 36790340 - 36790455
Alignment:
Q  60 gtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataa-tttctgatcaggttgagattttattggctaatattaatttcgg 158  Q
    |||| |||| ||||| |||||||||| | |||||||||||||||||||||| | || |||| | | ||  |||||||||||||||||| ||||||||| |    
T  36790340 gtctcatttattaacctttcataaaacaaaaatacataacacccaccacccaaaaaatttcggct-agactgagattttattggctaacattaatttcag 36790438  T
Q  159 gacaatttcttgataaa 175  Q
     ||||||||||||||||    
T  36790439 aacaatttcttgataaa 36790455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 15577678 - 15577839
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa---tacataacacccaccaccccat 113  Q
    |||| |||||||||||||  | |||||| ||  |||||||||||||| |||| ||||  ||| |||||||| |||   |||||||||||||||| |||||    
T  15577678 agatccaagaatgacatgtcacaataatcacctttagatttcagtctcatttattaatcttttataaaaaaaaaaaaatacataacacccaccaacccat 15577777  T
Q  114 aatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     ||||| |  |||  ||||||| |||||||||| |||||||||  |||  ||||||||||||    
T  15577778 gatttccggccagactgagattatattggctaacattaatttcaagactttttcttgataaa 15577839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 15238612 - 15238458
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaata----aatacataacacccaccaccccataattt 118  Q
    ||||||||||||  | |||||| |  ||||||||||||||| |||| ||  | |||||||||||| |    |||| ||||||||||||||||||| ||||    
T  15238612 aagaatgacatgacacaataatcatccttagatttcagtctcatttatt--cctttcataaaaaaaataaaaataaataacacccaccaccccatgattt 15238515  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  | |   |||||||||||| |||| ||||||||| | ||||||||||||||||    
T  15238514 ccggcccgacagagattttattgactaacattaatttcagtacaatttcttgataaa 15238458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 35444714 - 35444634
Alignment:
Q  95 ataacacccaccaccccataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||||||||||||| ||||| ||||  |  |||| |||||||||||||| ||| ||||||||| | || |||||||||||||    
T  35444714 ataacacccaccatcccatgattttcggccaggctgagattttattggttaacattaatttcagaactatttcttgataaa 35444634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 35445629 - 35445546
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacc 102  Q
    |||||||||||| |||  | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||    
T  35445629 attcaagaatgatatgacacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacc 35445546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 198
Target Start/End: Complemental strand, 15238419 - 15238385
Alignment:
Q  164 tttcttgataaattttttcttgatatatagcattg 198  Q
    |||||||| ||||||||||||||||||||||||||    
T  15238419 tttcttgagaaattttttcttgatatatagcattg 15238385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 3962016 - 3961976
Alignment:
Q  164 tttcttgataaattttttcttgatatatagcattgttcaaa 204  Q
    |||||||||||| | |||||||||||||||||||| |||||    
T  3962016 tttcttgataaaatctttcttgatatatagcattgctcaaa 3961976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 40880737 - 40880781
Alignment:
Q  131 agattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||||||||||||||| ||||||||| ||| |||||||| |||||    
T  40880737 agattttattggctaacattaatttcaggataatttcttcataaa 40880781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 48880955 - 48880995
Alignment:
Q  164 tttcttgataaattttttcttgatatatagcattgttcaaa 204  Q
    |||||||||||| | |||||||||||||||||||| |||||    
T  48880955 tttcttgataaaatctttcttgatatatagcattgctcaaa 48880995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 6e-44; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 20091632 - 20091790
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||| | |||||| || ||||||||||||||| |||| ||||| |||||||||||| ||||||||||||||||||||||||| ||    
T  20091632 agattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcataaaaaaaaaatacataacacccaccaccccatgat 20091731  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |   ||| |||||||||||||||||| ||||||||| |||| |||||||||||||    
T  20091732 ttccggctaggctgagattttattggctaacattaatttcaggacgatttcttgataaa 20091790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 24844692 - 24844848
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||| ||||||| ||||| | |||||| |||||||||||| | ||||| || ||||| ||||||||||||  ||||||||||||||||||||| || ||    
T  24844692 agatttaagaatggcatggcaaaataatcactcttagattttaatcttaattattaacctttcataaaaaa--aatacataacacccaccaccctatgat 24844789  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||  |||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  24844790 ttccaatcaggatgagattttattggctaacattaatttcgggacaatttcttgataaa 24844848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 34665615 - 34665458
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||| | |||||| || ||||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||||| |||| ||    
T  34665615 agattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcataaaaaa-aaatacataacacccaccactccatgat 34665517  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||  |  || | |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  34665516 tttcggccaagctgagattttattggctaacattaatttcaggacaatttcttgataaa 34665458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 26041946 - 26042102
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||||||||| ||||    
T  26041946 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccaccccatgattt 26042045  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | | ||||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  26042046 ccggtcaggctgagattttattggttaacattaatttcaggactatttcttgataaa 26042102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 17841683 - 17841839
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||||||||| ||||    
T  17841683 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccaccccatgattt 17841782  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  17841783 ccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 17841839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 23 - 175
Target Start/End: Original strand, 3596878 - 3597030
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctga 122  Q
    |||||||| |||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||||||||| ||||| |     
T  3596878 aagaatgatatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccaccccatgatttccgg 3596977  T
Q  123 tcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  3596978 tcaggctgagattttattggttaacattaatttcaggactatttcttgataaa 3597030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 25581072 - 25581228
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    |||||||||||||||   | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||||||||| ||||    
T  25581072 attcaagaatgacataacacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccaccccatgattt 25581171  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | | ||||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  25581172 ccggtcaggctgagattttattggttaacattaatttcaggactatttcttgataaa 25581228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 40779962 - 40780118
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | |||||||||| |||||||||||| ||||    
T  40779962 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacatccaccaccccatgattt 40780061  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  40780062 ccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 40780118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 22 - 175
Target Start/End: Original strand, 1645800 - 1645954
Alignment:
Q  22 caagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa-tacataacacccaccaccccataatttct 120  Q
    |||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| ||| |||||||||||||||||||||| |||||     
T  1645800 caagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaaatacataacacccaccaccccatgatttcc 1645899  T
Q  121 gatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    || |||| |||||||||||| ||||| |||||||||  ||| |||||||||||||    
T  1645900 gaccaggctgagattttattagctaacattaatttcaagactatttcttgataaa 1645954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 37985887 - 37986044
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||| | |||||| ||  |||||||||||||  |||| ||||  |||||||||||| ||||||||||||||||||||||||| ||    
T  37985887 agattcaagaatgacatggcacaataatcacctttagatttcagtcccatttattaatctttcataaaaaa-aaatacataacacccaccaccccatgat 37985985  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||  |||||||||||||||||  ||||||||| |||| |||||||||||||    
T  37985986 ttccggccagactgagattttattggctagcattaatttcaggactatttcttgataaa 37986044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 6108066 - 6108222
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||  | |||||| ||  |||||||||||||| |||| ||||  |||||||||||  | ||||||||||||||||||||||| ||||    
T  6108066 attcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcataaaaagaagatacataacacccaccaccccatgattt 6108165  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  6108166 ccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 6108222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 23 - 175
Target Start/End: Original strand, 42754879 - 42755031
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctga 122  Q
    ||||||||||||||| |||||| ||  |||||||||||||| |||| ||||  |||||||||||| ||||||||||||||||||| ||||| ||||  |     
T  42754879 aagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaatacataacacccaccatcccatgattttcgg 42754978  T
Q  123 tcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     |||| |||||||||||||| ||| |||||||||  ||| |||||||||||||    
T  42754979 ccaggctgagattttattggttaacattaatttcatgactatttcttgataaa 42755031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 8454065 - 8453910
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | |||||||||||||||||| |||||||||    
T  8454065 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaa-agatacataacacccaccacaccataattt 8453967  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||| |||||||||||||  | | ||||||||| |||| |||||||||||||    
T  8453966 ccggccaggctgagattttattgtgttacattaatttcaggactatttcttgataaa 8453910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 14129091 - 14128940
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| |||||||||||||||||||||| || ||||    
T  14129091 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaatacataacacccaccaccctatgattt 14128992  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
        || || |||||||||||||||||| |||||||||  ||| |||||||||||||    
T  14128991 ----tc-ggctgagattttattggctaacattaatttcaagactatttcttgataaa 14128940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 30055750 - 30055615
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||  | |||||| || ||||||||| ||||| |||| ||||| |||||||||||| |||||||||||| |||||||||||| ||    
T  30055750 agattcaagaatgacatgacacaataatcacccttagattttagtctcatttattaacctttcataaaaaaaaaatacataacatccaccaccccatgat 30055651  T
Q  117 ttctgatcaggttgagattttattggctaatattaat 153  Q
    ||| |  || | |||||||||||||||||| ||||||    
T  30055650 ttccggcca-gctgagattttattggctaacattaat 30055615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 15187794 - 15187636
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    |||| |||||||||||| | | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| |||||||||||||||||||| |||| ||    
T  15187794 agatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaa-aaatacataacacccaccactccatgat 15187696  T
Q  117 ttctgatcaggtt-gagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||| | ||||||||||||||||| |||||||||  ||| |||||||||||||    
T  15187695 ttccggccaggctagagattttattggctaacattaatttcaagactatttcttgataaa 15187636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 3890446 - 3890606
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtt--tcataaaaaataaatacataacacccaccaccccata 114  Q
    |||||||||||||| |||| |||||||| ||  |||||||| | |||||||| ||||| ||  |  || |||| |||||||||||||||||||||||||     
T  3890446 agattcaagaatgatatggcagaataatcaccattagattttaatcttatttattaaccttaattttataaaaaaaatacataacacccaccaccccatg 3890545  T
Q  115 atttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||||     || | |||||||||||||||||| |||||||||| |||||||||||||||||    
T  3890546 attttcagccatgatgagattttattggctaacattaatttcgagacaatttcttgataaa 3890606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 41819599 - 41819767
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa----------tacataacacccacc 106  Q
    ||||||||||||||||||  | |||||| || ||||||||||||||| |||| ||||| | |||||||||| |||          |||||||||| ||||    
T  41819599 agattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacctatcataaaaaaaaaaaaaaaaaaaatacataacacacacc 41819698  T
Q  107 accccataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||||||| ||||| |  | || |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  41819699 accccatgatttccggccgggctgagattttattggctaacattaatttcaggacaatttcttgataaa 41819767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 30834887 - 30835036
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||| ||||||||||||  |||||||  || ||||||||||||| |||||| | ||| ||| |||||| | ||||||||||||||||||||||||| ||    
T  30834887 agattaaagaatgacatgacagaataaccacccttagatttcagtgttatttttcaacttttgataaaata-aaatacataacacccaccaccccatgat 30834985  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||         ||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  30834986 ttc--------ctgagattttattgactaacattaatttcaggacaatttcttgataaa 30835036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 35353273 - 35353117
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| ||  ||| |||| | ||| |||| ||||  |||||||||||| | ||||||||||||||||||| ||| ||||    
T  35353273 attcaagaatgacatggcacaataatcacctttaaattttaatctcatttattaatctttcataaaaaaaagatacataacacccaccacctcatgattt 35353174  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||| |||||||||||||| ||| |||||||||  ||  |||||||||||||    
T  35353173 ccggccaggctgagattttattggttaacattaatttcatgattatttcttgataaa 35353117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 10044582 - 10044419
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa-----tacataacacccaccacccc 111  Q
    ||||||||||||||||||| | |||||| ||  |||||||||| ||| |||| ||||  |||||||||||| |||     ||||||||| ||||||| ||    
T  10044582 agattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttcataaaaaaaaaaaaaaatacataacaaccaccactcc 10044483  T
Q  112 ataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    || ||||| || ||| ||||||||||||||||||| ||||||| |   || |||||||||||||    
T  10044482 atgatttccgaccagattgagattttattggctaacattaattccaaaactatttcttgataaa 10044419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 31347607 - 31347771
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttg--ttaa-cgtttcataaaaaataaa---tacataacacccaccaccc 110  Q
    ||||||||||||||||||| | |||||| ||  |||||||||||||| ||||   |||  | |||||||||||| |||   |||||||||||||| ||||    
T  31347607 agattcaagaatgacatggcacaataatcacctttagatttcagtctcatttaatttattcctttcataaaaaaaaaaaaatacataacacccactaccc 31347706  T
Q  111 cataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |||||||  | |   ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  31347707 catgatttctggcccgacagagattttattggctaacattaatttcaggacaatttcttgataaa 31347771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 37132512 - 37132646
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||| ||||||||||  | |||||| || |||||||||||||||||||| ||||| ||||| |||||| ||| ||||||    ||||||||||| ||    
T  37132512 agattcatgaatgacatgacacaataatcacccttagatttcagtcttatttattaacctttca-aaaaaaaaaaaacataa----caccaccccatgat 37132606  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttc 156  Q
    |||  |||||  |||||||||||||||||| |||||||||    
T  37132607 ttccaatcagactgagattttattggctaacattaatttc 37132646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 39772633 - 39772790
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    |||| |||||||||||||  | |||||| ||  |||||||||||| |  ||| ||||  |||||||||||| ||||||||||||||||||| ||||| ||    
T  39772633 agatccaagaatgacatgacacaataatcacctttagatttcagtttcgtttattaatctttcataaaaaaaaaatacataacacccaccatcccatgat 39772732  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  | || |||||||||||||||||| |||||||||  ||| |||| ||||||||    
T  39772733 ttccg-gctggctgagattttattggctaacattaatttcaagactattttttgataaa 39772790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 32064974 - 32064821
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataa-atacataacacccaccaccccataatttctg 121  Q
    ||||||||||||  | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| || |||||||||||||| || ||||| ||||| |    
T  32064974 aagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaagatacataacacccatcagcccatgatttccg 32064875  T
Q  122 atcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
      |||| |||||||||||||| ||| ||||||||| | |  |||||||||||||    
T  32064874 gccaggctgagattttattggttaacattaatttcagaattatttcttgataaa 32064821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 32394058 - 32393934
Alignment:
Q  50 ttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctgatcaggttgagattttattggctaatat 149  Q
    |||||||||||||| |||| ||||  |||||||||||| |||||||||||||| |||||||||| ||||  |   ||  |||||||||||||||||| ||    
T  32394058 ttagatttcagtctcatttattaatctttcataaaaaa-aaatacataacacctaccaccccatgattttcggctagactgagattttattggctaacat 32393960  T
Q  150 taatttcgggacaatttcttgataaa 175  Q
    |||||||  ||| |||||||||||||    
T  32393959 taatttcaagactatttcttgataaa 32393934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 7022213 - 7022054
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa---tacataacacccaccaccccat 113  Q
    |||||||||||||||| |  | ||||||  | ||||||||||||||| |||| ||  | |||||||||||| |||   ||||||||||||||||||||||    
T  7022213 agattcaagaatgacaagtcacaataatcgcccttagatttcagtctcatttatt--cctttcataaaaaaaaaaaaatacataacacccaccaccccat 7022116  T
Q  114 aatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     ||||| |  | |    |||||||||||||||| ||||||||||| ||||||||||||||||    
T  7022115 gatttccggcccgacatagattttattggctaacattaatttcggtacaatttcttgataaa 7022054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 24211450 - 24211542
Alignment:
Q  83 aaaaataaatacataacacccaccaccccataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||||| ||||||||||||||||||||||||| ||||| |  |||| |||||||||||||| ||| |||||||||  ||| |||||||||||||    
T  24211450 aaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaagactatttcttgataaa 24211542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 155
Target Start/End: Original strand, 27835316 - 27835422
Alignment:
Q  49 cttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctgatcaggttgagattttattggctaata 148  Q
    ||||||||||| ||| |||| ||||| ||| |||||| | ||||||||||||||||||| ||||| ||||| |   ||| |||||||||||||||||| |    
T  27835316 cttagatttcaatctcatttattaaccttttataaaacaaaaatacataacacccaccatcccatgatttccgtctaggctgagattttattggctaaca 27835415  T
Q  149 ttaattt 155  Q
    |||||||    
T  27835416 ttaattt 27835422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 82 - 175
Target Start/End: Original strand, 7017761 - 7017854
Alignment:
Q  82 aaaaaataaatacataacacccaccaccccataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||||||||||||||||||||||||||||||| ||||| |  | |   ||||||||||||||||| ||||||||  | ||||||||||||||||    
T  7017761 aaaaaataaatacataacacccaccaccccatgatttccggcccgacagagattttattggctaacattaattttagtacaatttcttgataaa 7017854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 38017167 - 38017047
Alignment:
Q  17 agattcaagaatgacatggtagaataata-actcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataa 115  Q
    ||||||||||||||||||  | ||||||  ||  |||||||||||||| |||| ||||  ||||| ||||||  |||||||||||||||||||||||| |    
T  38017167 agattcaagaatgacatgacacaataatttacctttagatttcagtctcatttattaatctttcaaaaaaaa--aatacataacacccaccaccccatga 38017070  T
Q  116 tttctgatcaggttgagatttta 138  Q
    |||| |  |||| ||||||||||    
T  38017069 tttccggccaggctgagatttta 38017047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 175
Target Start/End: Original strand, 27782027 - 27782106
Alignment:
Q  96 taacacccaccaccccataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||||||||||||||| || ||||| |  |||  | |||||||||||||||| |||||||||  |||||||||||||||||    
T  27782027 taacacccaccacccaatgatttccggccagactaagattttattggctaacattaatttcaagacaatttcttgataaa 27782106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 198
Target Start/End: Complemental strand, 30797210 - 30797095
Alignment:
Q  82 aaaaaataaatacataacacccaccaccccataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaatttttt 181  Q
    |||||| || ||||||| ||||||||||| || ||||| | | |||  || |||||||||||||| || ||||||| ||| |||| || ||||| | |||    
T  30797210 aaaaaaaaagtacataagacccaccaccc-atgatttccggttagggagaaattttattggctaacatcaatttcgagactattttttaataaaatcttt 30797112  T
Q  182 cttgatatatagcattg 198  Q
     ||||||||||||||||    
T  30797111 tttgatatatagcattg 30797095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 24211203 - 24211273
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaa 87  Q
    |||| |||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  ||||||||||||    
T  24211203 agatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaa 24211273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 15972822 - 15972866
Alignment:
Q  131 agattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||||||||||||||| ||||| ||| | ||||||||||||||||    
T  15972822 agattttattggctaacattaaattcagaacaatttcttgataaa 15972866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 1e-41; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 14138901 - 14138744
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||| | |||||| ||  |||||||||| ||| |||| ||||  |||||||||||| ||||||||||||||||||||||||| ||    
T  14138901 agattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttcataaaaaa-aaatacataacacccaccaccccatgat 14138803  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| ||||||| |||||||||||||||||| ||||||||| |||| |||||||||||||    
T  14138802 ttccgatcaggctgagattttattggctaacattaatttcaggactatttcttgataaa 14138744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 33584162 - 33584318
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||||||||| ||||    
T  33584162 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccaccccatgattt 33584261  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  33584262 ccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 33584318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 11360962 - 11361120
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||| | |||||| |   |||||||||| ||| |||| ||||  ||||||| |||| ||||||||||||||||||||||||| ||    
T  11360962 agattcaagaatgacatggcacaataatcatctttagatttcaatctaatttattaatctttcatacaaaaaaaatacataacacccaccaccccatgat 11361061  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||| |||||||||||||||||| ||||||||| |||| |||||||||||||    
T  11361062 ttccggccaggctgagattttattggctaacattaatttcaggactatttcttgataaa 11361120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 25398470 - 25398314
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    |||||| |||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||||||||| ||||    
T  25398470 attcaacaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccaccccatgattt 25398371  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  25398370 ccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 25398314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 31640772 - 31640929
Alignment:
Q  17 agattcaagaatgacatggtagaataata-actcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataa 115  Q
    ||||||||||||||||||| ||||||||  ||| |||||||    |||||||| ||||| |||||||||||| ||||||||||||||||||||||||| |    
T  31640772 agattcaagaatgacatggcagaataatcgact-ttagattgatatcttatttattaacctttcataaaaaa-aaatacataacacccaccaccccatga 31640869  T
Q  116 tttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||| |  |||| |||||||||||||||||| |||||||||  |||||||||||||||||    
T  31640870 tttccggccaggctgagattttattggctaacattaatttcatgacaatttcttgataaa 31640929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 8145607 - 8145451
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| ||||||||||||||||||| ||||| ||    
T  8145607 agattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaa-aaatacataacacccacca-cccatgat 8145510  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| || |||| |||||||||||||||||| |||| ||||  ||| |||||||||||||    
T  8145509 ttccgaccaggctgagattttattggctaacattagtttcaagactatttcttgataaa 8145451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 12851034 - 12850877
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa-tacataacacccaccaccccataatt 117  Q
    ||||||||||||||||| | |||||  ||  |||||||||||||| |||| ||||  |||||||||||| ||| |||||||||||||||||||||| |||    
T  12851034 attcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcataaaaaagaaaatacataacacccaccaccccatgatt 12850935  T
Q  118 tctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    || |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  12850934 tccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 12850877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 2477864 - 2477712
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctga 122  Q
    ||||||||||||| | ||| || ||  ||||||||||||||||||| ||||  |||||||||||| ||||||||||||||||||||||||| ||||| |     
T  2477864 aagaatgacatggcacaatgatcacctttagatttcagtcttatttattaatctttcataaaaaaaaaatacataacacccaccaccccatgatttccgg 2477765  T
Q  123 tcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     |||| ||| ||||||||| |||| |||||||||  ||| |||||||||||||    
T  2477764 ccaggctgaaattttattgactaacattaatttcaagactatttcttgataaa 2477712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 4892434 - 4892278
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||| ||||  | ||||||||||||||||||||||| ||||    
T  4892434 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcattaaaagaagatacataacacccaccaccccatgattt 4892335  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  4892334 ccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 4892278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 23 - 175
Target Start/End: Original strand, 6043349 - 6043500
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctga 122  Q
    ||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| |||||||||||||||| |||||||| ||||| |     
T  6043349 aagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaa-aaatacataacacccaacaccccatgatttccgg 6043447  T
Q  123 tcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     |||| |||||||||||||| ||||||||||||| | || |||||||||||||    
T  6043448 ccaggctgagattttattggttaatattaatttcagcactatttcttgataaa 6043500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 27482057 - 27481898
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttc-agtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataa 115  Q
    |||||||||||||||||   |||||||| ||  ||||||||  | |||||||| ||||| ||| |||||||| ||||||||||||||||||||||||| |    
T  27482057 agattcaagaatgacataacagaataatcacctttagatttttaatcttatttattaaccttttataaaaaaaaaatacataacacccaccaccccatga 27481958  T
Q  116 tttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||| ||  ||| ||| |||||||||||||| |||||||||| ||||||||||| |||||    
T  27481957 tttccgactaggatgaaattttattggctaacattaatttcgtgacaatttcttcataaa 27481898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 23 - 175
Target Start/End: Original strand, 4433845 - 4433996
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctga 122  Q
    ||||||||||||| | |||||| ||  ||||||||||||||||||| ||||  |||||||||||| ||||||||||||||||||| ||||| ||||| |     
T  4433845 aagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttcataaaaaa-aaatacataacacccaccatcccatgatttccgg 4433943  T
Q  123 tcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     |||  |||||||||||||| ||| ||||||||| | || |||||||||||||    
T  4433944 ccagactgagattttattggttaacattaatttcagaactatttcttgataaa 4433996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 37321626 - 37321782
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    |||||||||||| |||| | |||||| ||  |||||||||||||| |||| ||||  ||||||||| || ||||||||||||||||||||||||| ||||    
T  37321626 attcaagaatgaaatggcacaataatcacctttagatttcagtctcatttattaatctttcataaataaaaaatacataacacccaccaccccatgattt 37321725  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |   ||  |||||||||||||||||| |||||||||  ||| |||| ||||||||    
T  37321726 ccggctagactgagattttattggctaacattaatttcaagactatttattgataaa 37321782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 38899559 - 38899715
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||  ||  |||||||||||||| |||| ||||  |||||||||||| | ||| ||||||||||||||||||| ||||    
T  38899559 attcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcataaaaaaaagatatataacacccaccaccccatgattt 38899658  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
      |  |||  |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  38899659 tcggccagactgagattttattggttaacattaatttcaggactatttcttgataaa 38899715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 22912888 - 22913043
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||| | |||||| || ||||||||||||||| |||| ||    | |||||||||| |||||||||||| |||||||||||| ||    
T  22912888 agattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatttc--tctcataaaaaa-aaatacataacatccaccaccccatgat 22912984  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||||  | |   ||||||||||||||||| ||||||||| | ||||||||||||||||    
T  22912985 ttctggcccgacagagattttattggctaacattaatttcagtacaatttcttgataaa 22913043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 3362980 - 3362854
Alignment:
Q  50 ttagatttcagtcttatttgttaacgtttcataaaaaataa-atacataacacccaccaccccataatttctgatcaggttgagattttattggctaata 148  Q
    |||||||||||||| |||| ||||  |||||||||||| || ||||||||||||||||||||||| ||||| |  |||  |||||||||||||| ||| |    
T  3362980 ttagatttcagtctcatttattaatctttcataaaaaaaaagatacataacacccaccaccccatgatttccggccagactgagattttattggttaaca 3362881  T
Q  149 ttaatttcgggacaatttcttgataaa 175  Q
    |||||||| |||| |||||||||||||    
T  3362880 ttaatttcaggactatttcttgataaa 3362854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 12614569 - 12614722
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaataca--taacacccaccaccccata 114  Q
    ||||| ||||||||||||| | |||||| ||  |||||||||||||| |||| ||||| |||||||||||| ||| | |  |||||||||||| ||||||    
T  12614569 agatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcataaaaaaaaaaaaaaaataacacccaccatcccata 12614668  T
Q  115 atttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |        |||| |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  12614669 aa-------caggctgagattttattggctaacattaatttcaggacaatttcttgataaa 12614722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 13664792 - 13664708
Alignment:
Q  18 gattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacaccc 103  Q
    ||||||||||||||||| ||||||||| || |||||||||||||||||||| |||| |||| |||||||| |||||||||||||||    
T  13664792 gattcaagaatgacatgatagaataatcacccttagatttcagtcttatttattaatgttttataaaaaa-aaatacataacaccc 13664708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 23 - 175
Target Start/End: Original strand, 3521844 - 3521995
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctga 122  Q
    ||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||||||||| ||||| |     
T  3521844 aagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaa-agatacataacacccaccaccccatgatttccgg 3521942  T
Q  123 tcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     ||   | |||||||||||| ||| ||||||||| | || |||||||||||||    
T  3521943 ccaaactaagattttattggttaacattaatttcagaactatttcttgataaa 3521995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 36880219 - 36880299
Alignment:
Q  82 aaaaaataaatacataacacccaccaccccataatttctgatcaggttgagattttattggctaatattaatttcgggaca 162  Q
    |||||| |||||||||||| |||||| ||||||||||| || |||  ||| |||||||||||||| ||||||||| |||||    
T  36880219 aaaaaaaaaatacataacatccaccatcccataatttccgaccagactgaaattttattggctaacattaatttcaggaca 36880299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 17545588 - 17545674
Alignment:
Q  89 aaatacataacacccaccaccccataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||||| ||||||||||||||||||| ||||| |  | |   |||||||||||| |||| ||||||||| | ||||||||||||||||    
T  17545588 aaataaataacacccaccaccccatgatttccggcccgacagagattttattgactaacattaatttcagtacaatttcttgataaa 17545674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 13664695 - 13664645
Alignment:
Q  148 attaatttcgggacaatttcttgataaattttttcttgatatatagcattg 198  Q
    ||||||||||| |||||||||||||||| | |||||| ||||||| |||||    
T  13664695 attaatttcggaacaatttcttgataaaatctttcttaatatataacattg 13664645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 198
Target Start/End: Original strand, 17545713 - 17545747
Alignment:
Q  164 tttcttgataaattttttcttgatatatagcattg 198  Q
    |||||||| ||||||||||||||||||||||||||    
T  17545713 tttcttgagaaattttttcttgatatatagcattg 17545747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 1e-41; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 30563443 - 30563285
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||  | |||||| || |||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||| ||    
T  30563443 agattcaagaatgacatgacacaataatcacacttagatttcagtcttatttattaacctttcataaaaaaaaaatacataacacccaccaccccatgat 30563344  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||| ||||||||||||||| || ||||||| | ||| ||||||||||||||    
T  30563343 ttccggccaggctgagattttattggccaacattaattgcaggataatttcttgataaa 30563285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 46442076 - 46441920
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||||||||| ||||    
T  46442076 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccaccccatgattt 46441977  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  ||||||||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  46441976 ccggccaggttgagattttattggttaacattaatttcaggactatttcttgataaa 46441920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 7744943 - 7745101
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||| | | |||||| ||  |||||||||| ||| |||| ||||  |||||||||||| ||||||||||||||||||||||||| ||    
T  7744943 agattcaagaatgacattgcacaataatcacctttagatttcaatctcatttattaatatttcataaaaaaaaaatacataacacccaccaccccatgat 7745042  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||| |||||||||||||||||| ||||||||| |||| |||||||||||||    
T  7745043 ttccggccaggctgagattttattggctaacattaatttcaggactatttcttgataaa 7745101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 47290298 - 47290142
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||||| |||||| ||  |||||||||||||| |||| |||   |||||||||||| | ||||||||||||||||||||||| ||||    
T  47290298 attcaagaatgacatggtacaataatcacctttagatttcagtctcatttattattctttcataaaaaaaagatacataacacccaccaccccatgattt 47290199  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  47290198 ccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 47290142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 21802151 - 21802311
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccac---caccccat 113  Q
    ||||||||||||||||||  | |||||| || ||||||||||||||| |||| ||||  |||||||||||| |||||||||||||||||   ||||||||    
T  21802151 agattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaatctttcataaaaaa-aaatacataacacccaccaccaccccat 21802249  T
Q  114 aatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     ||||| |  |||  |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  21802250 gatttccggccagactgagattttattggctaacattaatttcaggacaatttcttgataaa 21802311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 9089102 - 9088946
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| |   |||||||||||||| |||| ||||  ||||||| |||| | ||||||||||||||||||||||| ||||    
T  9089102 attcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttcatacaaaaaagatacataacacccaccaccccatgattt 9089003  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  9089002 ccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 9088946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 36073581 - 36073426
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||||||||| ||||    
T  36073581 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaa-agatacataacacccaccaccccatgattt 36073483  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | | ||||| |||||||||||||| ||| |||||||||  ||  |||||||||||||    
T  36073482 ccggtcaggctgagattttattggttaacattaatttcatgaatatttcttgataaa 36073426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 22199493 - 22199337
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    |||| |||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| |||||||||||||||||||||| || ||    
T  22199493 agatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaa-aaatacataacacccaccaccc-atgat 22199396  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||||  |||| |||||||||||||||||| |||| ||||  ||| |||||||||||||    
T  22199395 ttctggccaggctgagattttattggctaacattagtttcaagactatttcttgataaa 22199337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 37934773 - 37934930
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    |||||||| ||||| |||  | |||||| || ||||||||||| ||| |||| ||||| |||||||||||| |||||||||||| |||||| ||||||||    
T  37934773 agattcaataatgatatgacacaataatcacccttagatttcaatctcatttattaacctttcataaaaaa-aaatacataacaaccaccatcccataat 37934871  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| || |||  |||||||||||||| ||| ||||||||| ||| ||||||||||||||    
T  37934872 ttccgaccagactgagattttattggttaacattaatttcaggataatttcttgataaa 37934930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 42671902 - 42671745
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||  | |||||| | |||||||||| ||||| |||||||||| |||| ||||||| ||| ||||||||| || |||||||||||    
T  42671902 agattcaagaatgacatgacataataatcattcttagatttgagtctcatttgttaacctttcgtaaaaaa-aaaaacataacactcatcaccccataat 42671804  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  ||  ||||||||||||||| ||| ||||||||  ||||||||||||||||||    
T  42671803 ttccggccaaattgagattttattggttaacattaattttaggacaatttcttgataaa 42671745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 4751675 - 4751522
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa-tacataacacccaccaccccataatttctg 121  Q
    ||||||||||||| | |||||  ||  |||||||||||||| |||| ||||  |||||||||||| ||| |||||||||||||||||||||| ||||| |    
T  4751675 aagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcataaaaaagaaaatacataacacccaccaccccatgatttccg 4751576  T
Q  122 atcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |||  |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  4751575 accagactgagattttattggttaacattaatttcaggactatttcttgataaa 4751522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 49387720 - 49387877
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataa-atacataacacccaccaccccataatt 117  Q
    ||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| || |||||||||| |||||||||||| |||    
T  49387720 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaagatacataacatccaccaccccatgatt 49387819  T
Q  118 tctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    || |   ||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  49387820 tccggctaggctgagattttattggttaacattaatttcaggactatttcttgataaa 49387877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 10442618 - 10442778
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttattt-gttaacgtttc-ataaaaaataaatacataacacccaccaccccata 114  Q
    ||||||||||||||||||| | |||||| ||  |||||||||||||| ||||  ||||  |||| | |||||| ||| |||||||||||||||||||||     
T  10442618 agattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatttaatctttcaaaaaaaaaaaaaaacataacacccaccaccccatg 10442717  T
Q  115 atttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||||| |  |||| |||||||||||||||||| ||||||||| |||| |||||||||||||    
T  10442718 atttccggccaggctgagattttattggctaacattaatttcaggactatttcttgataaa 10442778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 24128467 - 24128315
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctga 122  Q
    ||||||||||||  | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | |||||||||| |||||||||||| ||||| |     
T  24128467 aagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacatccaccaccccatgatttccgg 24128368  T
Q  123 tcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  24128367 ccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 24128315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 31078652 - 31078808
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| |   |||||||||| ||| |||| ||||  |||||||||||| | |||||||||||||| |||||||| ||||    
T  31078652 attcaagaatgacatggcacaataatcatctttagatttcaatctcatttattaatctttcataaaaaaaagatacataacacccatcaccccatgattt 31078751  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  31078752 ccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 31078808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 23 - 175
Target Start/End: Original strand, 44893050 - 44893202
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctga 122  Q
    ||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||| ||||| ||||  |     
T  44893050 aagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccatcccatgattttcgg 44893149  T
Q  123 tcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  44893150 ccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 44893202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 44893654 - 44893502
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctga 122  Q
    ||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||| ||||| ||||  |     
T  44893654 aagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccatcccatgattttcgg 44893555  T
Q  123 tcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  44893554 ccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 44893502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 50156412 - 50156567
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||  | |||||| || ||||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||||||||| ||||    
T  50156412 attcaagaatgacatgacataataatcac-cttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccaccccatgattt 50156510  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||| |||||||||||||| ||| ||||||||   ||| |||||||||||||    
T  50156511 ccggccaggctgagattttattggttaacattaattttatgactatttcttgataaa 50156567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 53123263 - 53123107
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| |   |||||||||||||| |||| ||||  ||||||| |||| | ||||||||||||||||||||||| ||||    
T  53123263 attcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttcatacaaaaaagatacataacacccaccaccccatgattt 53123164  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||  |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  53123163 ccggccagactgagattttattggttaacattaatttcaggactatttcttgataaa 53123107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 17655664 - 17655506
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||| ||||||||||||  | |||||| ||  |||||||||||||| |||| ||||| |||||||||||| | | | |||||||||| || ||||| ||    
T  17655664 agatttaagaatgacatgacataataattacctttagatttcagtctcatttattaacctttcataaaaaaaatacatataacacccatcatcccatgat 17655565  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||| |||||||||||||||||| ||||||||| |||| |||||||||||||    
T  17655564 ttccggccaggctgagattttattggctaacattaatttcaggactatttcttgataaa 17655506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 37219865 - 37219701
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaat------aaatacataacacccaccaccc 110  Q
    ||||| ||||||||||||| |||||||| |  ||||||||||| |||||||| ||||| |||||||||||||      |||||||||||| ||| |||||    
T  37219865 agatttaagaatgacatggcagaataatcatccttagatttcaatcttatttattaacctttcataaaaaataaaaaaaaatacataacatccatcaccc 37219766  T
Q  111 cataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     || ||||| |  |||  ||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  37219765 aatgatttccggccagactgagattttattgactaacattaatttcaggacaatttcttgataaa 37219701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 23964295 - 23964454
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa-tacataacacccaccaccccataa 115  Q
    ||||| ||||||||||||| | |||||| |   |||||||||| ||| |||| ||||  |||||||||||| ||| |||||||||||||||||| ||| |    
T  23964295 agatttaagaatgacatggcataataatcatctttagatttcaatctcatttattaatctttcataaaaaaaaaaatacataacacccaccaccgcatga 23964394  T
Q  116 tttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||| | ||||| ||||||||||||| |||| |||||||||  ||| |||||||||||||    
T  23964395 tttccggtcaggctgagattttattgactaacattaatttcaagactatttcttgataaa 23964454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 36073183 - 36073023
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa----tacataacacccaccaccccata 114  Q
    ||||||||||||||||| | |||||  ||  |||||||||||||| |||| ||||  |||||||||||| |||    ||||||||||||||||||||||     
T  36073183 attcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcataaaaaaaaaaaagatacataacacccaccaccccatg 36073084  T
Q  115 atttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||||| |  |||  |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  36073083 atttccggccagactgagattttattggttaacattaatttcaggactatttcttgataaa 36073023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 2625071 - 2624913
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    |||||||| |||||||| | | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| |||||||||||||||||||| |||| ||    
T  2625071 agattcaaaaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaatacataacacccaccactccatgat 2624972  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||  |||||||||||||  ||| |||||||||  ||  |||||||||||||    
T  2624971 ttccggccagactgagattttattgattaacattaatttcatgattatttcttgataaa 2624913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 33530515 - 33530677
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaata-----aatacataacacccaccacccc 111  Q
    |||| |||||||||||||| | |||||| ||  ||||||||||||||||||| ||||  |||||||||||| |     || ||||||||||||||||||     
T  33530515 agatccaagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttcataaaaaaaataaaaaaaacataacacccaccaccc- 33530613  T
Q  112 ataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    || ||||| |  |||| ||| |||||||||||||| |||| ||||  ||| |||||||||||||    
T  33530614 atgatttccggccaggctgaaattttattggctaacattagtttcaagactatttcttgataaa 33530677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 195
Target Start/End: Complemental strand, 9111434 - 9111321
Alignment:
Q  82 aaaaaataaatacataacacccaccaccccataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaatttttt 181  Q
    |||||| |||||||||  ||||| |||||||| ||||  |  ||||| || |||||||||| |||  ||||||||| ||||||||||||||||| | |||    
T  9111434 aaaaaaaaaatacatataacccatcaccccatgattttcggccaggtagaaattttattggttaactttaatttcgagacaatttcttgataaaatcttt 9111335  T
Q  182 cttgatatatagca 195  Q
    |||| |||||||||    
T  9111334 cttggtatatagca 9111321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 175
Target Start/End: Original strand, 36073639 - 36073732
Alignment:
Q  82 aaaaaataaatacataacacccaccaccccataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||||| ||| ||||||||| ||||||||||| ||||| |  ||   |||||||||||||||||||||||||||  |||||||||||| |||||    
T  36073639 aaaaaaaaaagacataacacgcaccaccccatgatttccggccaaactgagattttattggctaatattaattttaggacaatttcttcataaa 36073732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 175
Target Start/End: Complemental strand, 24392838 - 24392743
Alignment:
Q  80 ataaaaaataaatacataacacccaccaccccataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||||||| |||||||||||||||| |||||||| ||||| |  | |   |||||||||||| |||| ||||||||| | ||||||||||||||||    
T  24392838 ataaaaaaaaaatacataacacccatcaccccatgatttccggcccgacagagattttattgactaacattaatttcagtacaatttcttgataaa 24392743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 44744666 - 44744511
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||    |||||| |  |||||||||||||||||||| ||||| | | | |||||| |||||||||||||||||||||| || ||    
T  44744666 agattcaagaatgacatgactcaataattatccttagatttcagtcttatttattaacctat-acaaaaaa-aaatacataacacccaccaccctatgat 44744569  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||  ||| ||||||| | |||| || |||||| ||||||||| ||||||||    
T  44744568 ttccggccagactga-attttatcgactaacatcaatttcaggacaattttttgataaa 44744511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 25063406 - 25063443
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttaga 54  Q
    |||||||||||||||||||||||||||| |||||||||    
T  25063406 agattcaagaatgacatggtagaataatcactcttaga 25063443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 36073293 - 36073349
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaa 73  Q
    ||||| |||||||| |||  |||||||| ||||||||||||||||||||||| ||||    
T  36073293 agatttaagaatgatatgccagaataattactcttagatttcagtcttatttattaa 36073349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 52329508 - 52329315
Alignment:
Q  18 gattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa-------tacataacacccaccaccc 110  Q
    |||||||||||||||| | |||||||| || ||||||||||||||||| || ||||||||||||||||||||||       ||||||||||| |||||||    
T  52329508 gattcaagaatgacatagcagaataatcacccttagatttcagtcttaattattaacgtttcataaaaaataaaaaataaatacataacacctaccaccc 52329409  T
Q  111 cataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaattttttcttgatatatagcattgttcaaat 205  Q
     || |||||||  |||| |||||||||||||| ||| ||||||||||| ||  |||||||||||||| |||||||||||||| ||||| ||||||    
T  52329408 -atgatttctggccaggctgagattttattggttaacattaatttcggaactctttcttgataaattctttcttgatatataacattgctcaaat 52329315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 40215222 - 40215064
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| ||||||||||||||||||||||||| ||    
T  40215222 agattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatatttcataaaaaaaaaatacataacacccaccaccccatgat 40215123  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||| |||||||||||||||||| |||||||||  ||| |||||||||||||    
T  40215122 ttccggccaggctgagattttattggctaacattaatttcaagactatttcttgataaa 40215064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 27523087 - 27523244
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||   |||| ||| |||| || ||| ||||| |||||||||| ||||| |||||||||||| |||||||||||||||| |||||||| ||    
T  27523087 agattcaagaatcgtatggcagattaatcaccctttgattttagtcttatttattaacttttcataaaaaa-aaatacataacacccatcaccccatgat 27523185  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  27523186 ttccggccaggatgagattttattggctaacattaatttcgggacaatttcttgataaa 27523244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 51737737 - 51737581
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||||||||| ||||    
T  51737737 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccaccccatgattt 51737638  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
      | ||||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  51737637 tcggtcaggctgagattttattggttaacattaatttcaggactatttcttgataaa 51737581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 25463910 - 25463752
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    |||| |||||||||||||| | |||||| ||  |||||||| ||||| |||| ||||  |||||||||||| ||||||||||||||||||||||||| ||    
T  25463910 agatccaagaatgacatggcacaataatcacctttagatttaagtctcatttattaatctttcataaaaaaaaaatacataacacccaccaccccatgat 25463811  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||| |||||||||||||||||| |||||||||  ||| |||||||||||||    
T  25463810 ttccggccaggctgagattttattggctaacattaatttcaagactatttcttgataaa 25463752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 6883719 - 6883563
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||| | ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||||||||| ||||    
T  6883719 attcaagaatgacatggcataatattcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccaccccatgattt 6883620  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  6883619 ccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 6883563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 19015636 - 19015480
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  ||||||| |||| | ||||||||||||||||||||||| ||||    
T  19015636 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcatacaaaaaagatacataacacccaccaccccatgattt 19015537  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  19015536 ccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 19015480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 36966541 - 36966697
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    |||||||||| |||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||||||||| ||||    
T  36966541 attcaagaataacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccaccccatgattt 36966640  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||  |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  36966641 ccggccagactgagattttattggttaacattaatttcaggactatttcttgataaa 36966697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 41876275 - 41876431
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||| | | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||||||||| ||||    
T  41876275 attcaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccaccccatgattt 41876374  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
      |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  41876375 tcggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 41876431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 44690853 - 44691018
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataa-------aaaataaatacataacacccaccacc 109  Q
    ||||||||||||||||||| |||||||| || |||||||| ||||||||||| ||||  ||| ||||       ||||||||||||||||||||| ||||    
T  44690853 agattcaagaatgacatggcagaataatcacccttagattccagtcttatttattaatcttttataaaaaataaaaaataaatacataacacccaacacc 44690952  T
Q  110 ccataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||| ||||| |  |||  |||||||||||||||||| |||||||| |||| ||||||||||||||    
T  44690953 ccatgatttccggccagactgagattttattggctaacattaattttgggataatttcttgataaa 44691018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 37821667 - 37821823
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||  | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | |||||||||||||| |||||||| ||||    
T  37821667 attcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaacaccccatgattt 37821766  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
      |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  37821767 tcggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 37821823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 44094931 - 44094774
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    |||| |||||||||||||  | |||||| ||  |||||||||||||| |||| ||||  ||||||||| || ||||||||||||||||||||||||| ||    
T  44094931 agatccaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcataaagaa-aaatacataacacccaccaccccatgat 44094833  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||  |||||||||||||||||| ||||||||| |||  |||||||||||||    
T  44094832 ttccggccagactgagattttattggctaacattaatttcaggattatttcttgataaa 44094774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 198
Target Start/End: Complemental strand, 51621131 - 51620983
Alignment:
Q  49 cttagatttcagtcttatttgttaacgtttcataaaa---aataaatacataacacccaccaccccataatttctgatcaggttgagattttattggcta 145  Q
    |||| |||||| |||||||| ||||||||| ||||||   || |||||||||||| |||||||||||| ||||| ||||    ||||||||||||| |||    
T  51621131 cttaaatttcaatcttatttattaacgttttataaaataaaaaaaatacataacatccaccaccccatgatttccgatc----tgagattttattgacta 51621036  T
Q  146 atattaatttcgggacaatttcttgataaattttttcttgatatatagcattg 198  Q
    | ||||||||| |||| ||||||| ||||| | ||||||||||||||||||||    
T  51621035 acattaatttctggactatttcttaataaaatctttcttgatatatagcattg 51620983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 9910124 - 9910282
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataa--atacataacacccaccaccccataat 116  Q
    ||||||||||||||||| | |||||| ||  ||||||||||| ||||||| ||||  |||||||||||| ||  || |||||||||||||||||||| ||    
T  9910124 attcaagaatgacatggcacaataatcacctttagatttcagacttatttattaatctttcataaaaaaaaaagatgcataacacccaccaccccatgat 9910223  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  ||   |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  9910224 ttccggccatactgagattttattggttaacattaatttcaggactatttcttgataaa 9910282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 20304961 - 20305120
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcat-aaaaaataaatacataacacccaccaccccataa 115  Q
    ||||||||||||||||||| | |||||| ||  |||||||||||||| |||| | ||  |||||| |||||| ||||||||||||||||||| ||||| |    
T  20304961 agattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatcaatctttcataaaaaaaaaaatacataacacccaccatcccatga 20305060  T
Q  116 tttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||  |  || | |||||||||||||||||| ||||||||| |||  |||||||||||||    
T  20305061 ttttcggccaagctgagattttattggctaacattaatttcaggattatttcttgataaa 20305120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 18404682 - 18404518
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaa------aataaatacataacacccaccaccc 110  Q
    ||||| ||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  ||||||||||      || ||||||||||||||||||||||    
T  18404682 agatttaagaatgacatggcacaataatcacatttagatttcagtctcatttattaatctttcataaaataaaataaaaaatacataacacccaccaccc 18404583  T
Q  111 cataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     || ||||| || ||   |||||||||||||||||| ||||||||| |||| |||||||||||||    
T  18404582 tatgatttccgaccaaactgagattttattggctaacattaatttcaggactatttcttgataaa 18404518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 32000097 - 32000256
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaat---aaatacataacacccaccaccccat 113  Q
    ||||||||||||||||||| | |||||| || ||||||||||||||| |||| ||  | |||||||||||||   |||||||||||||||||||||||||    
T  32000097 agattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt--catttcataaaaaataaaaaatacataacacccaccaccccat 32000194  T
Q  114 aatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     ||||| |    |    |||||||||||||||| ||||||||| | ||||||||||||||||    
T  32000195 gatttccggctcgacatagattttattggctaacattaatttcagtacaatttcttgataaa 32000256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 3559851 - 3559693
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacat-aacacccaccaccccataa 115  Q
    |||| ||||||||| |||  | |||||| ||  ||| |||||||||| |||| ||||  |||||||||||| |||||||| ||||||||||||||||| |    
T  3559851 agatccaagaatgatatgacacaataatcacctttatatttcagtctcatttattaatctttcataaaaaa-aaatacattaacacccaccaccccatga 3559753  T
Q  116 tttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||| |  |||| |||||||||||||||||| |||||||||  ||| |||||||||||||    
T  3559752 tttccgcccaggctgagattttattggctaacattaatttcaagactatttcttgataaa 3559693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 22157370 - 22157489
Alignment:
Q  18 gattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatt 117  Q
    |||| ||||||||||||| |||||||| || |||| |||||| |||||||| ||||| |||||||||| | |||||||||||||| |||| |||||||||    
T  22157370 gatttaagaatgacatgggagaataatcacacttaaatttcaatcttatttattaacatttcataaaagaaaaatacataacacctaccatcccataatt 22157469  T
Q  118 tctgatcaggttgagatttt 137  Q
    |  | |||||||||| ||||    
T  22157470 ttcggtcaggttgagttttt 22157489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 25973639 - 25973489
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||  | |||||| ||  ||| |||||||||| |||| ||||  ||||||||||||  |||||||||||||||||||||||| ||||    
T  25973639 attcaagaatgacatgacacaataatcacctttaaatttcagtctcatttattaatctttcataaaaaa--aatacataacacccaccaccccatgattt 25973542  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
        || |   ||||||||||||||||| ||||||||| |||  |||||||||||||    
T  25973541 ----tcggccagagattttattggctaacattaatttcaggattatttcttgataaa 25973489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 33786462 - 33786624
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaata------cataacacccaccaccc 110  Q
    ||||||||||||||||||| | |||||| || ||||||||||||||| |||| ||  | |||||||||||| ||| |      ||||||| |||||||||    
T  33786462 agattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt--cctttcataaaaaaaaaaaaaaaatgcataacatccaccaccc 33786559  T
Q  111 cataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| ||||| |  | |   ||||||||||||||||| ||||||||| | ||||||||||||||||    
T  33786560 catgatttccggcccgacagagattttattggctaacattaatttcagtacaatttcttgataaa 33786624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 40273940 - 40273778
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaa--------tacataacacccaccaccc 110  Q
    ||||||||||||||||| | |||||| || ||||||||||||||| |||| ||  | |||||||||||| |||        |||||||||||||||||||    
T  40273940 attcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt--cctttcataaaaaaaaaaaaaaataatacataacacccaccaccc 40273843  T
Q  111 cataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| ||||| |  | |   ||||||||||||||||| ||||||||| | |||||||||| |||||    
T  40273842 catgatttccggcccgacagagattttattggctaacattaatttcagtacaatttcttaataaa 40273778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 7335574 - 7335427
Alignment:
Q  50 ttagatttcagtcttatttgttaac-gtttcataaaaaataaatacataacacccaccaccccataatttctgatcaggttgagattttattggctaata 148  Q
    ||||||||||||||| |||| | || |||||||||||||  |||||| || ||| |||||||||||||||| |  ||    ||||||||||||||||||     
T  7335574 ttagatttcagtcttgtttgatcactgtttcataaaaaa--aatacaaaagacctaccaccccataatttccggccatacagagattttattggctaatt 7335477  T
Q  149 ttaatttcgggacaatttcttgataaattt-tttcttgatatatagcatt 197  Q
    ||||||||| ||| ||||| |||||||    |||||||||||||||||||    
T  7335476 ttaatttcgagactatttcgtgataaaaaaatttcttgatatatagcatt 7335427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 10167600 - 10167476
Alignment:
Q  50 ttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctgatcaggttgagattttattggctaatat 149  Q
    ||||||||||||||||||| ||||  |||||||||||| ||||||| ||||| |||||  |||||||||| | ||||    | |||||||||||||| ||    
T  10167600 ttagatttcagtcttatttattaatttttcataaaaaa-aaatacacaacacacaccaaaccataatttccggtcagaccaaaattttattggctaacat 10167502  T
Q  150 taatttcgggacaatttcttgataaa 175  Q
    ||||||   |||||||| ||||||||    
T  10167501 taatttaaagacaattttttgataaa 10167476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 29202509 - 29202405
Alignment:
Q  20 ttcaagaatgacatggtagaataataactcttagatttcagtcttatttg-ttaacgtttcat----aaaaaataaatacataacacccaccaccccata 114  Q
    ||||| |||||||||| |||||| || | ||||||||||||||||||||| ||| ||||||||    |||||| |||||||||  |  ||||||||||||    
T  29202509 ttcaaaaatgacatggcagaatactatcccttagatttcagtcttatttgattaccgtttcattaaaaaaaaaaaaatacatatgatacaccaccccata 29202410  T
Q  115 atttc 119  Q
    |||||    
T  29202409 atttc 29202405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 44691057 - 44691017
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagattt 57  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  44691057 agattcaagaattacatggcagaataataactcttagattt 44691017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 34519874 - 34519834
Alignment:
Q  135 tttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||||||||||| ||||||||| ||||||||| ||||||||    
T  34519874 tttattggctaacattaatttcaggacaattttttgataaa 34519834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 41244 - 41087
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    |||| ||||||||| |||||| |||||| ||  |||||||||||||| |||| ||||  |||||||||||| ||||||||||||||||||||||||| ||    
T  41244 agatccaagaatgatatggtacaataatcacctttagatttcagtctcatttattaatctttcataaaaaa-aaatacataacacccaccaccccatgat 41146  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||| |||||||||||||||||| |||||||||  ||| |||||||||||||    
T  41145 ttccggccaggctgagattttattggctaacattaatttcaagactatttcttgataaa 41087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 48083 - 47926
Alignment:
Q  17 agattcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataat 116  Q
    ||||||||||||||||| | | |||||| |   |||||||||||||| |||| ||||  ||||||||||| |||||||||||||||||||||||||| ||    
T  48083 agattcaagaatgacatagcacaataatcatctttagatttcagtctcatttattaatctttcataaaaa-taaatacataacacccaccaccccatgat 47985  T
Q  117 ttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    ||| |  |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  47984 ttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 47926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 13070 - 12918
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctga 122  Q
    ||||||||||||  | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | |||||||||| |||||||||||| ||||| |     
T  13070 aagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacatccaccaccccatgatttccgg 12971  T
Q  123 tcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  12970 ccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 12918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 65; Significance: 2e-28; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 26168 - 26012
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||| ||||| ||||    
T  26168 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccatcccatgattt 26069  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||  |||||||||||||| ||| ||||||||| | || |||||||||||||    
T  26068 ccggccagcctgagattttattggttaacattaatttcagaactatttcttgataaa 26012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 16216 - 16060
Alignment:
Q  19 attcaagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataattt 118  Q
    ||||||||||||||||| | |||||| |   |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||| ||||| ||||    
T  16216 attcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccatcccatgattt 16117  T
Q  119 ctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    | |  |||  |||||||||||||| ||| ||||||||| | || |||||||||||||    
T  16116 ccggccagcctgagattttattggttaacattaatttcagaactatttcttgataaa 16060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 8603 - 8478
Alignment:
Q  50 ttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctgatcaggttgagattttattggctaatat 149  Q
    |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||| ||||| ||||| |  |||  |||||||||||||| ||| ||    
T  8603 ttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccatcccatgatttccggccagcctgagattttattggttaacat 8504  T
Q  150 taatttcgggacaatttcttgataaa 175  Q
    ||||||| | || |||||||||||||    
T  8503 taatttcagaactatttcttgataaa 8478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 4624 - 4472
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctga 122  Q
    |||||||| |||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| | ||||||||||||||||||||||| ||||  |     
T  4624 aagaatgatatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaacagatacataacacccaccaccccatgattttcgg 4525  T
Q  123 tcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     |||| |||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  4524 ccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 4472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 11849 - 11697
Alignment:
Q  23 aagaatgacatggtagaataataactcttagatttcagtcttatttgttaacgtttcataaaaaataaatacataacacccaccaccccataatttctga 122  Q
    ||||||||||||| | |||||| ||  |||||||||||||| |||| ||||  |||||||||||| ||||||||||||| ||||||||||| ||||  |     
T  11849 aagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaatacataacactcaccaccccatgattttcgg 11750  T
Q  123 tcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
     |||| |||||||||||||| ||| |||||||||  ||| |||||||||||||    
T  11749 ccaggctgagattttattggttaacattaatttcatgactatttcttgataaa 11697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 76 - 175
Target Start/End: Complemental strand, 3238 - 3144
Alignment:
Q  76 tttcataaaaaataaatacataacacccaccaccccataatttctgatcaggttgagattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||||||||||| |||||||||||||||||||||| || ||||    || || |||||||||||||||||| |||||||||  ||| |||||||||||||    
T  3238 tttcataaaaaaaaaatacataacacccaccaccctatgattt----tc-ggctgagattttattggctaacattaatttcaagactatttcttgataaa 3144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 85546 - 85502
Alignment:
Q  131 agattttattggctaatattaatttcgggacaatttcttgataaa 175  Q
    |||||||||||||||| ||||||||| ||| |||||||| |||||    
T  85546 agattttattggctaacattaatttcaggataatttcttcataaa 85502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University