View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19475_high_14 (Length: 498)

Name: NF19475_high_14
Description: NF19475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19475_high_14
NF19475_high_14
[»] chr3 (28 HSPs)
chr3 (54-305)||(50327319-50327574)
chr3 (94-302)||(13843374-13843582)
chr3 (54-305)||(40291676-40291922)
chr3 (54-305)||(4156553-4156806)
chr3 (54-311)||(20252550-20252805)
chr3 (69-305)||(50874614-50874854)
chr3 (103-300)||(44415058-44415266)
chr3 (102-315)||(33638201-33638405)
chr3 (133-269)||(37486298-37486435)
chr3 (54-115)||(25614680-25614741)
chr3 (63-116)||(44773529-44773582)
chr3 (54-115)||(50327545-50327606)
chr3 (185-305)||(32862015-32862135)
chr3 (368-455)||(3267092-3267179)
chr3 (234-305)||(13859792-13859863)
chr3 (54-115)||(4156504-4156565)
chr3 (54-115)||(10222369-10222429)
chr3 (54-115)||(44415404-44415464)
chr3 (63-116)||(50309728-50309781)
chr3 (241-305)||(4317532-4317596)
chr3 (241-304)||(34121630-34121693)
chr3 (54-115)||(4156313-4156374)
chr3 (54-108)||(44772955-44773009)
chr3 (54-115)||(50874839-50874900)
chr3 (54-104)||(40292539-40292590)
chr3 (54-115)||(50309538-50309599)
chr3 (54-114)||(10222540-10222600)
chr3 (57-104)||(33638445-33638493)
[»] chr8 (35 HSPs)
chr8 (54-305)||(4884248-4884499)
chr8 (75-304)||(40616780-40616995)
chr8 (103-250)||(21182895-21183033)
chr8 (124-268)||(9540726-9540870)
chr8 (202-305)||(15255645-15255748)
chr8 (63-116)||(10903645-10903698)
chr8 (54-115)||(17033278-17033339)
chr8 (54-115)||(17563714-17563775)
chr8 (54-115)||(17563867-17563928)
chr8 (63-116)||(34361057-34361110)
chr8 (63-116)||(36369159-36369212)
chr8 (55-115)||(33690855-33690915)
chr8 (54-115)||(222355-222416)
chr8 (54-115)||(691510-691571)
chr8 (54-115)||(735978-736039)
chr8 (54-115)||(859873-859934)
chr8 (63-116)||(14334665-14334718)
chr8 (54-115)||(13948262-13948324)
chr8 (54-115)||(14334472-14334533)
chr8 (54-115)||(17564102-17564162)
chr8 (54-115)||(17564250-17564311)
chr8 (54-115)||(33691392-33691453)
chr8 (54-115)||(34360920-34360981)
chr8 (103-143)||(21183071-21183111)
chr8 (54-116)||(17564150-17564212)
chr8 (54-116)||(33691272-33691334)
chr8 (54-116)||(222529-222590)
chr8 (54-116)||(691684-691745)
chr8 (54-116)||(736152-736213)
chr8 (54-116)||(860047-860108)
chr8 (54-115)||(10904107-10904169)
chr8 (54-115)||(10903858-10903917)
chr8 (54-116)||(10903985-10904049)
chr8 (54-115)||(36369353-36369413)
chr8 (54-104)||(4885116-4885168)
[»] chr4 (48 HSPs)
chr4 (54-305)||(49705163-49705414)
chr4 (54-305)||(23391942-23392193)
chr4 (155-305)||(45621644-45621794)
chr4 (69-304)||(15666909-15667142)
chr4 (133-269)||(35259040-35259177)
chr4 (174-305)||(27512067-27512198)
chr4 (237-305)||(9764383-9764451)
chr4 (54-115)||(6583251-6583311)
chr4 (54-115)||(6583356-6583416)
chr4 (54-115)||(15667161-15667222)
chr4 (63-116)||(31878886-31878939)
chr4 (171-252)||(48511697-48511778)
chr4 (182-265)||(34441996-34442079)
chr4 (54-108)||(23517775-23517829)
chr4 (63-116)||(26464415-26464468)
chr4 (54-115)||(38936517-38936577)
chr4 (241-305)||(16041322-16041386)
chr4 (244-304)||(22771909-22771969)
chr4 (63-115)||(38936272-38936324)
chr4 (54-121)||(46172886-46172956)
chr4 (241-305)||(48997123-48997187)
chr4 (54-116)||(6583055-6583118)
chr4 (258-305)||(40140450-40140497)
chr4 (63-110)||(46172391-46172438)
chr4 (54-115)||(27511723-27511785)
chr4 (54-115)||(6582870-6582931)
chr4 (54-116)||(6583484-6583548)
chr4 (54-115)||(35653021-35653082)
chr4 (54-91)||(38936874-38936911)
chr4 (54-104)||(23516419-23516469)
chr4 (54-115)||(23516807-23516868)
chr4 (54-104)||(26464180-26464230)
chr4 (54-108)||(26466213-26466267)
chr4 (54-108)||(35652182-35652236)
chr4 (54-108)||(35652292-35652346)
chr4 (54-116)||(35652558-35652619)
chr4 (63-116)||(35652847-35652901)
chr4 (54-104)||(35653070-35653120)
chr4 (54-99)||(38936321-38936367)
chr4 (54-115)||(46172562-46172624)
chr4 (54-115)||(55374964-55375026)
chr4 (63-104)||(5837038-5837079)
chr4 (63-116)||(23516628-23516681)
chr4 (54-115)||(26464218-26464279)
chr4 (54-115)||(46172183-46172244)
chr4 (54-115)||(46172662-46172722)
chr4 (54-105)||(30819313-30819364)
chr4 (75-115)||(38936741-38936781)
[»] chr2 (17 HSPs)
chr2 (54-305)||(17562804-17563061)
chr2 (54-305)||(43178209-43178460)
chr2 (368-483)||(29483306-29483420)
chr2 (54-115)||(17563049-17563110)
chr2 (63-116)||(9623484-9623537)
chr2 (182-263)||(45369274-45369355)
chr2 (206-269)||(24133930-24133993)
chr2 (54-108)||(41193545-41193599)
chr2 (54-115)||(2153263-2153324)
chr2 (54-115)||(41194557-41194617)
chr2 (54-115)||(31366236-31366297)
chr2 (63-116)||(41194707-41194760)
chr2 (63-115)||(9623658-9623710)
chr2 (55-115)||(31365997-31366056)
chr2 (54-104)||(43177547-43177598)
chr2 (54-115)||(12997600-12997661)
chr2 (55-116)||(31366098-31366158)
[»] chr7 (33 HSPs)
chr7 (79-310)||(31846423-31846647)
chr7 (368-482)||(22616330-22616444)
chr7 (182-305)||(46401182-46401305)
chr7 (368-483)||(41970609-41970723)
chr7 (368-455)||(38364183-38364269)
chr7 (116-310)||(17189288-17189478)
chr7 (182-305)||(32027371-32027494)
chr7 (54-108)||(28682929-28682983)
chr7 (54-115)||(10165784-10165844)
chr7 (63-116)||(40474913-40474966)
chr7 (54-115)||(40475140-40475200)
chr7 (54-115)||(45918999-45919060)
chr7 (54-109)||(28682559-28682613)
chr7 (54-116)||(28682357-28682422)
chr7 (54-108)||(32746842-32746896)
chr7 (69-143)||(46401099-46401172)
chr7 (54-91)||(10165588-10165625)
chr7 (54-115)||(10166136-10166197)
chr7 (54-115)||(35086913-35086974)
chr7 (54-115)||(40474726-40474787)
chr7 (63-116)||(43986134-43986187)
chr7 (54-115)||(45919596-45919657)
chr7 (145-213)||(22628481-22628549)
chr7 (63-115)||(32746365-32746417)
chr7 (56-108)||(33381129-33381181)
chr7 (54-116)||(22628228-22628290)
chr7 (54-116)||(35087017-35087079)
chr7 (54-104)||(28682155-28682205)
chr7 (70-116)||(33381744-33381790)
chr7 (54-104)||(33381966-33382016)
chr7 (241-302)||(27859635-27859696)
chr7 (67-116)||(40474828-40474876)
chr7 (60-104)||(17189129-17189173)
[»] chr5 (21 HSPs)
chr5 (54-305)||(31506762-31507033)
chr5 (103-304)||(8466421-8466618)
chr5 (124-305)||(42545092-42545273)
chr5 (319-366)||(5818881-5818928)
chr5 (54-115)||(31070139-31070200)
chr5 (54-115)||(3523881-3523942)
chr5 (54-115)||(26817727-26817787)
chr5 (63-115)||(31508208-31508260)
chr5 (54-116)||(28748320-28748383)
chr5 (54-115)||(3523642-3523702)
chr5 (54-115)||(31069939-31069999)
chr5 (54-91)||(42906146-42906183)
chr5 (63-115)||(8465526-8465578)
chr5 (80-115)||(8466246-8466281)
chr5 (67-115)||(32956687-32956737)
chr5 (54-115)||(31069655-31069717)
chr5 (54-91)||(28748879-28748916)
chr5 (75-115)||(32956859-32956900)
chr5 (54-105)||(9270929-9270981)
chr5 (54-114)||(26817898-26817958)
chr5 (63-103)||(42908104-42908144)
[»] chr1 (38 HSPs)
chr1 (368-490)||(26209792-26209914)
chr1 (368-484)||(16136607-16136723)
chr1 (63-116)||(790821-790874)
chr1 (63-116)||(22871961-22872014)
chr1 (54-115)||(24918006-24918067)
chr1 (54-115)||(51235432-51235493)
chr1 (54-115)||(24187411-24187472)
chr1 (54-115)||(27841879-27841940)
chr1 (54-115)||(32714821-32714881)
chr1 (54-115)||(34386881-34386942)
chr1 (54-115)||(34394373-34394434)
chr1 (54-115)||(51235850-51235911)
chr1 (54-115)||(8066158-8066220)
chr1 (368-441)||(14244659-14244733)
chr1 (54-115)||(790625-790686)
chr1 (54-91)||(791172-791209)
chr1 (54-115)||(24187168-24187228)
chr1 (54-115)||(27842122-27842182)
chr1 (54-115)||(34387123-34387183)
chr1 (54-115)||(34394127-34394187)
chr1 (54-115)||(51235697-51235757)
chr1 (54-116)||(790736-790798)
chr1 (54-116)||(8065908-8065970)
chr1 (75-121)||(32715226-32715273)
chr1 (54-115)||(8066349-8066411)
chr1 (54-116)||(22872303-22872364)
chr1 (232-298)||(32001440-32001506)
chr1 (54-116)||(32714949-32715010)
chr1 (54-115)||(32715083-32715145)
chr1 (259-305)||(34715020-34715066)
chr1 (54-115)||(790987-791047)
chr1 (54-115)||(8065790-8065851)
chr1 (54-91)||(15648089-15648126)
chr1 (54-103)||(15648347-15648396)
chr1 (54-115)||(15648832-15648893)
chr1 (54-115)||(32130426-32130487)
chr1 (54-105)||(46240528-46240579)
chr1 (54-114)||(51235745-51235808)
[»] chr6 (11 HSPs)
chr6 (155-304)||(29396706-29396853)
chr6 (124-305)||(8635275-8635456)
chr6 (149-263)||(29489437-29489551)
chr6 (155-273)||(1800215-1800333)
chr6 (54-115)||(27597029-27597090)
chr6 (54-115)||(33703267-33703327)
chr6 (54-108)||(12896714-12896768)
chr6 (54-115)||(27596828-27596888)
chr6 (54-115)||(29397774-29397832)
chr6 (62-115)||(29396957-29397010)
chr6 (54-115)||(33703100-33703161)
[»] scaffold0196 (1 HSPs)
scaffold0196 (182-272)||(7922-8012)
[»] scaffold0488 (6 HSPs)
scaffold0488 (54-115)||(6576-6637)
scaffold0488 (54-115)||(6715-6776)
scaffold0488 (54-115)||(7112-7173)
scaffold0488 (54-116)||(7010-7072)
scaffold0488 (54-116)||(6834-6895)
scaffold0488 (54-115)||(6962-7022)


Alignment Details
Target: chr3 (Bit Score: 144; Significance: 2e-75; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 54 - 305
Target Start/End: Complemental strand, 50327574 - 50327319
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagt----tgtttttaaaattgatatggttaatggttcggttcggt-c 148  Q
    |||||| |||||| |||||| ||| |||||||||||||| |||||| ||||||| |    |||||||||||| || ||||||||||||||||||| || |    
T  50327574 aataagctgtttt-ataaaataagttgttttgaataagctgttttttaaaataaataagctgtttttaaaatagaaatggttaatggttcggttcagttc 50327476  T
Q  149 ggttcagataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattt 248  Q
     |||| ||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| ||||| ||||||||||||||| |||| |||||||    
T  50327475 cgttcggataattgtggttactaacggttcagttcggttagtgaattgttatcaaaataatggttcggttcgagaattggttaaatggttcaattaattt 50327376  T
Q  249 tgatatggttcggttcggttaaccgattcgaattggtttttggttatttttgcccac 305  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  50327375 tgatacggttcggttcggttaaccggttcgaattggtttttggttatttttgcccac 50327319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 94 - 302
Target Start/End: Original strand, 13843374 - 13843582
Alignment:
Q  94 gtttttaaaaataagttgtttttaaaattgatatggttaatggttcggttcggt-cggttcagataattgtggttaccaacggttcaggtcggttagtaa 192  Q
    |||||| ||||||||||||||||||| | |||||| |||||||||||||| ||| |||||| ||||||||||||||| |||||||||| ||||||||| |    
T  13843374 gttttttaaaataagttgtttttaaa-tagatatgcttaatggttcggtttggttcggttcggataattgtggttactaacggttcagttcggttagtga 13843472  T
Q  193 attgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttgatatggttcggttcggttaaccgattcgaattggtttttggt 292  Q
    ||||||||| ||||||||||| ||||| |||| |||||||||| ||||||||||||||||||||||| ||||||||||||| ||| |||||| |||||||    
T  13843473 attgttatccaaataatggttcggttcgagaaatggttaaatggttcagttaattttgatatggttcagttcggttaaccggttcaaattgggttttggt 13843572  T
Q  293 tatttttgcc 302  Q
    ||||||||||    
T  13843573 tatttttgcc 13843582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 54 - 305
Target Start/End: Complemental strand, 40291922 - 40291676
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaa-taagcagtttttaaaaataagttgtttttaaaattgatatggttaatggttcggttcggt-cgg 150  Q
    ||||||||||||| ||||||| |||||||||| || ||||  ||||| ||   ||||||||||||||||| |||| || ||||||||||||| ||| |||    
T  40291922 aataagttgttttgcataaaataagctgttttaaaataagttgttttgaa---taagttgtttttaaaatagataaggctaatggttcggtttggttcgg 40291826  T
Q  151 ttcagataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttg 250  Q
    ||| ||||||||||||||| |||||||||| ||||||| | |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||    
T  40291825 ttcggataattgtggttactaacggttcagttcggttaatgaattgttatcaaaataatggttcggttcaagaattggttaaatggttcagttaattctg 40291726  T
Q  251 atatggttcggttcggttaaccgattcgaattggtttttggttatttttgcccac 305  Q
    |||     ||||||||||||||| |||||||||||||||||||||||||||||||    
T  40291725 ata-----cggttcggttaaccggttcgaattggtttttggttatttttgcccac 40291676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 54 - 305
Target Start/End: Original strand, 4156553 - 4156806
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaataagttgtttttaaaattgatatggttaatggttcggttcggt-cggt 151  Q
    ||||| ||||||| ||||||| ||| ||| |||||||||| |||||| |||||||| |||||||||||| ||||||||||||||||| ||| | | ||||    
T  4156553 aataacttgttttgcataaaataagttgtcttgaataagctgttttttaaaataagctgtttttaaaatagatatggttaatggttcagtttgattcggt 4156652  T
Q  152 tcagataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttga 251  Q
    || ||||||||||||||| ||| |||||| ||||||||  ||||||||||||||||||||||  |||| |||||| |||||||||||||||||| |||||    
T  4156653 tcggataattgtggttactaacagttcagttcggttagcgaattgttatcaaaataatggttccgttcgagaattagttaaatgattcagttaactttga 4156752  T
Q  252 tatggttcggttcggttaaccgattcgaattggtttttggttatttttgcccac 305  Q
    ||  |||||||||||||||| | ||| |||||  ||||||||||||||||||||    
T  4156753 tacagttcggttcggttaactggttcaaattgaattttggttatttttgcccac 4156806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 54 - 311
Target Start/End: Complemental strand, 20252805 - 20252550
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaataagttgtttttaaaattgatatggttaatggttcggttcggt-cggt 151  Q
    ||||||||||||| ||||||  ||| |||||||||||||  | |||||||| |||||||||||||||   |||||| |||||||||||||| ||| ||||    
T  20252805 aataagttgttttgcataaat-aagttgttttgaataagttgattttaaaa-taagttgtttttaaaga-gatatgcttaatggttcggtttggttcggt 20252709  T
Q  152 tcagataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttga 251  Q
    || ||||||||||||||| |||||||||| | |||| || |||||||||||||||||| ||| ||||| ||||||||||||||  |||||||||||||||    
T  20252708 tcggataattgtggttactaacggttcagtttggtt-gtgaattgttatcaaaataattgttcggttcgagaattggttaaattgttcagttaattttga 20252610  T
Q  252 tatggttcggttcggttaaccgattcgaattggtttttggttatttttgcccacgcttac 311  Q
    |||||||||||||||||||||| ||| |||||| |||| ||||||||||||||| |||||    
T  20252609 tatggttcggttcggttaaccggttcaaattgggttttagttatttttgcccacccttac 20252550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 69 - 305
Target Start/End: Complemental strand, 50874854 - 50874614
Alignment:
Q  69 taaaacaagctgttttgaataagcagtttt-taaaa---ataagttgtttttaaaattgatatggttaatggttcggttcggtc-ggttcagataattgt 163  Q
    ||||| ||| |||||||||||||| ||||| |||||   ||||| |||||||||||| || ||||||||||||||||||| ||  ||||| |||||||||    
T  50874854 taaaataagttgttttgaataagctgttttataaaataaataagctgtttttaaaatagaaatggttaatggttcggttcagtttggttcggataattgt 50874755  T
Q  164 ggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttgatatggttcggtt 263  Q
    |||||| |||||||||| || |||||| |||||||||||||||||||||||||||| | |||| |||||||| ||||||||||||||||| |||||||||    
T  50874754 ggttactaacggttcagttccgttagtgaattgttatcaaaataatggtttggttcgaaaatttgttaaatggttcagttaattttgatacggttcggtt 50874655  T
Q  264 cggttaaccgattcgaattggtttttggttatttttgcccac 305  Q
     ||||||||||||  ||||||||||||  |||||||||||||    
T  50874654 tggttaaccgatt-aaattggtttttgcgtatttttgcccac 50874614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 103 - 300
Target Start/End: Complemental strand, 44415266 - 44415058
Alignment:
Q  103 aataagttgtttttaaaattgatatggttaatggttcggttcggt-----------cggttcagataattgtggttaccaacggttcaggtcggttagta 191  Q
    |||||| |||||||||||| |||||||||||||||| |||| |||           |||||| ||||||||||||||| |||||||||| |||||||||     
T  44415266 aataagctgtttttaaaatagatatggttaatggttaggtttggttaggtttggttcggttcggataattgtggttactaacggttcagttcggttagtg 44415167  T
Q  192 aattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttgatatggttcggttcggttaaccgattcgaattggtttttgg 291  Q
    | |||||||||||||||||||| | ||| ||||||||||||||  ||||||||||||||||| ||| || |||| |||||||||||||||||||||||||    
T  44415166 agttgttatcaaaataatggttcgattcgagaattggttaaatagttcagttaattttgatacggtgcgattcgattaaccgattcgaattggtttttgg 44415067  T
Q  292 ttatttttg 300  Q
    |||||||||    
T  44415066 ttatttttg 44415058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 102 - 315
Target Start/End: Complemental strand, 33638405 - 33638201
Alignment:
Q  102 aaataagttgtttttaaaattgatatggttaatggttcggttcggtcggttcagataattgtggttaccaacggttcaggtcggttagtaaattgttatc 201  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||         ||||||||  |||| ||||||| || ||||||||| |||||| |||    
T  33638405 aaataagctgtttttaaaatagatatggttaatggttcggttcgg---------ataattgtaattactaacggttaagttcggttagtgaattgtcatc 33638315  T
Q  202 aaaataatggtttggttcaagaattggttaaatgattcagttaattttgatatggttcggttcggttaaccgattcgaattggtttttggttatttttgc 301  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||| |||||||||||||||| |||||||| ||| |||||  |||||||||||||| |    
T  33638314 aaaataatggtttggttcgagaattggttaaatggttcagtttattgtgatatggttcggttcagttaaccggttcaaattgaattttggttatttttac 33638215  T
Q  302 ccacgcttacttct 315  Q
    |||| | |||||||    
T  33638214 ccacccctacttct 33638201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 269
Target Start/End: Original strand, 37486298 - 37486435
Alignment:
Q  133 atggttcggttcggt-cggttcagataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggtta 231  Q
    ||||||||||||||| |||||  ||||| ||||||||  || ||||| | ||||||| | || || ||||||||||||||||  |||||  || | || |    
T  37486298 atggttcggttcggttcggtttggataactgtggttattaatggttcggttcggttaattaactgctatcaaaataatggttcagttcataaacttgtga 37486397  T
Q  232 aatgattcagttaattttgatatggttcggttcggtta 269  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  37486398 aatggttcagttaattttgatatggttcggttcagtta 37486435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 25614741 - 25614680
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||||||||||||||  |||||| |||||||| ||||||    
T  25614741 aataagttgttttcataaaataagctgttttgaataagttgttttttaaaataaggtgtttt 25614680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 44773529 - 44773582
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||    
T  44773529 ttttcataaaagaagctgttttgaataagctgttttaaaaaataagttgttttt 44773582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 50327606 - 50327545
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| |||||||||||||||| ||||||||||||||| |||||  |||||||||||||||    
T  50327606 aataagctgttttcataaaacaaactgttttgaataagctgttttataaaataagttgtttt 50327545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 185 - 305
Target Start/End: Complemental strand, 32862135 - 32862015
Alignment:
Q  185 gttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttgatatggttcggttcggttaaccgattcgaattgg 284  Q
    |||||| ||||||| | ||||||| |||||||||||| || |  |  ||||||||||||||||||  | |||||| |||||| |||||| || || |  |    
T  32862135 gttagtgaattgtttttaaaataacggtttggttcaataaataatgcaatgattcagttaattttagtttggttcagttcggctaaccggtttgactcag 32862036  T
Q  285 tttttggttatttttgcccac 305  Q
    |||||||||||||||||||||    
T  32862035 tttttggttatttttgcccac 32862015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 455
Target Start/End: Original strand, 3267092 - 3267179
Alignment:
Q  368 gacacaaatacgacaccatgggtagtttggatatttccaccattaagcaggggcagttttgtcaaatccccacagacccatcttcttc 455  Q
    ||||||||||| ||||||||| |||||| || ||||| ||||| ||  ||||||| |||||||||||| | ||| |||||||||||||    
T  3267092 gacacaaatacaacaccatggatagtttagacatttcaaccataaattaggggcaattttgtcaaatcacaacaaacccatcttcttc 3267179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 305
Target Start/End: Original strand, 13859792 - 13859863
Alignment:
Q  234 tgattcagttaattttgatatggttcggttcggttaaccgattcgaattggtttttggttatttttgcccac 305  Q
    |||||| ||||||||| |||||||||||||| |||||||| |||  |||||||||||||||  |||||||||    
T  13859792 tgattcggttaattttaatatggttcggttcagttaaccggttcagattggtttttggttaactttgcccac 13859863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 4156504 - 4156565
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| ||||||||| ||||||| |||||||||||||| |||||| ||||||| |||||||    
T  4156504 aataagctgttttcatgaaacaagttgttttgaataagctgttttttaaaataacttgtttt 4156565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 10222369 - 10222429
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||| ||||||||||| |||||| |||||||| ||||||    
T  10222369 aataagttgttttcataaaataagctg-tttgaataagctgttttttaaaataaggtgtttt 10222429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 44415464 - 44415404
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||  ||||| || |||||||||||||||||||||| |||||||||||||||    
T  44415464 aataagttgttttt-taaaataaactgttttgaataagcagttttttaaaataagttgtttt 44415404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 50309781 - 50309728
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    ||||||||||| |||||||||||||||||  ||||| |||||||||||||||||    
T  50309781 ttttcataaaagaagctgttttgaataaggtgttttcaaaaataagttgttttt 50309728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 305
Target Start/End: Original strand, 4317532 - 4317596
Alignment:
Q  241 gttaattttgatatggttcggttcggttaaccgattcgaattggtttttggttatttttgcccac 305  Q
    |||||||||  ||||| |||||||||||||||| |||| ||||||| ||||||| ||||||||||    
T  4317532 gttaattttagtatggatcggttcggttaaccggttcggattggttattggttaattttgcccac 4317596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 241 - 304
Target Start/End: Complemental strand, 34121693 - 34121630
Alignment:
Q  241 gttaattttgatatggttcggttcggttaaccgattcgaattggtttttggttatttttgccca 304  Q
    ||||||||| ||||||||| |||||||||| ||||||  | |||||||| ||||||||||||||    
T  34121693 gttaattttaatatggttcagttcggttaatcgattcagaatggtttttagttatttttgccca 34121630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 4156313 - 4156374
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    ||||||||||||| ||||||| ||| |||||||||||||| |||||| |||||||||||||||    
T  4156313 aataagttgttttgcataaaataagttgttttgaataagctgttttt-aaaataagttgtttt 4156374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 44773009 - 44772955
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataag 108  Q
    |||||||||||||||||||| || ||||||||||||||  |||||| ||||||||    
T  44773009 aataagttgttttcataaaataaactgttttgaataagttgttttttaaaataag 44772955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 50874900 - 50874839
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| ||||||||||||||||  ||||||||||||   |||||| |||||||||||||||    
T  50874900 aataagctgttttcataaaacaaattgttttgaataaattgttttttaaaataagttgtttt 50874839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 40292539 - 40292590
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaa 104  Q
    ||||||||||||| ||||||| |||||||||||||||||| |||||| ||||    
T  40292539 aataagttgttttgcataaaataagctgttttgaataagctgttttttaaaa 40292590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 50309599 - 50309538
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| ||||||||||||||||||  |||||  ||||||| ||||||    
T  50309599 aataaggtattttcataaaataagctgttttgaataagctattttttgaaataaggtgtttt 50309538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 10222540 - 10222600
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttt 114  Q
    |||||| | ||||||||||| |||||||||||||||| |  ||||| |||||||| |||||    
T  10222540 aataaggtattttcataaaataagctgttttgaataatctattttttaaaataaggtgttt 10222600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 33638493 - 33638445
Alignment:
Q  57 aagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaa 104  Q
    |||||||||| ||||||| ||||||||||||||||||  ||||||||||    
T  33638493 aagttgttttgcataaaataagctgttttgaataagctttttttaaaaa 33638445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 1e-73; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 54 - 305
Target Start/End: Complemental strand, 4884499 - 4884248
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaa-taagcagtttttaaaaataagttgtttttaaaattgatatggttaatggttcggttcggt-cgg 150  Q
    ||||||||||||| ||||||| |||||||||| || ||||  ||||| ||   ||||||||||||||||| |||| || ||||||||||||| ||| |||    
T  4884499 aataagttgttttgcataaaataagctgttttaaaataagttgttttgaa---taagttgtttttaaaatagataaggctaatggttcggtttggttcgg 4884403  T
Q  151 ttcagataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttg 250  Q
    ||| ||||||||||||||| |||||||||| ||||||| | |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||    
T  4884402 ttcggataattgtggttactaacggttcagttcggttaatgaattgttatcaaaataatggttcggttcaagaattggttaaatggttcagttaattctg 4884303  T
Q  251 atatggttcggttcggttaaccgattcgaattggtttttggttatttttgcccac 305  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4884302 atacggttcggttcggttaaccggttcgaattggtttttggttatttttgcccac 4884248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 75 - 304
Target Start/End: Original strand, 40616780 - 40616995
Alignment:
Q  75 aagctgttttgaataagcagtttttaaaaataagttgtttttaaaattgatatggttaatggttcggttcggtcggttcagataattgtggttaccaacg 174  Q
    |||||||||||||||||| |||||| |||||||| |||||||||||||||||||||| ||||||||||||||         |||||||||||||| ||||    
T  40616780 aagctgttttgaataagctgttttttaaaataagctgtttttaaaattgatatggttgatggttcggttcgg---------ataattgtggttactaacg 40616870  T
Q  175 gttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttgatatggttcggttcggttaaccga 274  Q
    |||||| |||||| || ||||||||| |||||||||||| |     ||||||||||||||||||||||||||||||||||||||||||||||||||  |     
T  40616871 gttcagttcggttggtgaattgttattaaaataatggttcg-----agaattggttaaatgattcagttaattttgatatggttcggttcggttaatagg 40616965  T
Q  275 ttcgaattggtttttggttatttttgccca 304  Q
    ||| ||||| ||||||||||||||||||||    
T  40616966 ttcaaattgatttttggttatttttgccca 40616995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 103 - 250
Target Start/End: Complemental strand, 21183033 - 21182895
Alignment:
Q  103 aataagttgtttttaaaattgatatggttaatggttcggttcggtcggttcagataattgtggttaccaacggttcaggtcggttagtaaattgttatca 202  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||         |||||| | ||||| ||| |||||| ||||||||| |||| ||||||    
T  21183033 aataagttgtttttaaaatagatatggctaatggttcggttcgg---------ataattatagttactaactgttcagttcggttagtgaattattatca 21182943  T
Q  203 aaataatggtttggttcaagaattggttaaatgattcagttaattttg 250  Q
    ||||||| ||| ||||| ||||||| ||||||| ||||||||||||||    
T  21182942 aaataatagttcggttcgagaattgattaaatggttcagttaattttg 21182895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 124 - 268
Target Start/End: Original strand, 9540726 - 9540870
Alignment:
Q  124 atatggttaatggttcggttcggt-cggttcagataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaag 222  Q
    ||||||||| ||||| |||||||| |||||  ||||| ||||||||  || ||||| | ||||||| | || |||||||||||||||||||  ||||||     
T  9540726 atatggtta-tggtttggttcggttcggtttggataactgtggttattaatggttcggttcggttaattaactgttatcaaaataatggttcagttcaaa 9540824  T
Q  223 aattggttaaatgattcagttaattttgatatggttcggttcggtt 268  Q
    |||| || ||||| |||||||||||||||||||||||| |||||||    
T  9540825 aatttgtgaaatggttcagttaattttgatatggttcgattcggtt 9540870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 15255645 - 15255748
Alignment:
Q  202 aaaataatggtttggttcaagaattggttaaatgattcagttaattttgatatggttcggttcggttaaccgattcgaattggtttttggttatttttgc 301  Q
    ||||||||||||  |||||| ||||  | ||||| |||||||||||||||||| |||||||||| ||||| ||||||| | |||| ||||||| ||||||    
T  15255645 aaaataatggttcagttcaaaaatttatgaaatggttcagttaattttgatatagttcggttcgattaactgattcgattcggttattggttaattttgc 15255744  T
Q  302 ccac 305  Q
    ||||    
T  15255745 ccac 15255748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 10903698 - 10903645
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||    
T  10903698 ttttcataaaagaagctgttttgaataagctgttttaaaaaataagttgttttt 10903645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 17033339 - 17033278
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||||||||||||||  |||||| |||||||| ||||||    
T  17033339 aataagttgttttcataaaataagctgttttgaataagttgttttttaaaataaggtgtttt 17033278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 17563775 - 17563714
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||||||||||||||  |||||| |||||||| ||||||    
T  17563775 aataagttgttttcataaaataagctgttttgaataagttgttttttaaaataaggtgtttt 17563714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 17563928 - 17563867
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||||||||||||||  |||||| |||||||| ||||||    
T  17563928 aataagttgttttcataaaataagctgttttgaataagttgttttttaaaataaggtgtttt 17563867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 34361110 - 34361057
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||    
T  34361110 ttttcataaaagaagctgttttgaataagctgttttcaaaaataagttgttttt 34361057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 36369212 - 36369159
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||    
T  36369212 ttttcataaaagaagctgttttgaataagctgttttcaaaaataagttgttttt 36369159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 33690915 - 33690855
Alignment:
Q  55 ataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    ||||||||||||||||||| |||||||||||||||||  |||||| |||||||| ||||||    
T  33690915 ataagttgttttcataaaataagctgttttgaataagttgttttttaaaataaggtgtttt 33690855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 222416 - 222355
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| ||||||||||||||||||  |||||||||||||| ||||||    
T  222416 aataaggtattttcataaaataagctgttttgaataagctatttttaaaaataaggtgtttt 222355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 691571 - 691510
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| ||||||||||||||||||  |||||||||||||| ||||||    
T  691571 aataaggtattttcataaaataagctgttttgaataagctatttttaaaaataaggtgtttt 691510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 736039 - 735978
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| ||||||||||||||||||  |||||||||||||| ||||||    
T  736039 aataaggtattttcataaaataagctgttttgaataagctatttttaaaaataaggtgtttt 735978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 859934 - 859873
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| ||||||||||||||||||  |||||||||||||| ||||||    
T  859934 aataaggtattttcataaaataagctgttttgaataagctatttttaaaaataaggtgtttt 859873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 14334718 - 14334665
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    ||||||||||| || ||||||||||||||| ||||| |||||||||||||||||    
T  14334718 ttttcataaaagaaactgttttgaataagctgttttcaaaaataagttgttttt 14334665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 13948324 - 13948262
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    ||||||||||||| ||||||| | ||| |||||||||||| |||||| |||||||||||||||    
T  13948324 aataagttgtttttcataaaatatgcttttttgaataagctgttttttaaaataagttgtttt 13948262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 14334533 - 14334472
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| ||||||||||||||||||  ||||| |||||||||| ||||    
T  14334533 aataaggtattttcataaaataagctgttttgaataagctattttttaaaataagttatttt 14334472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 17564102 - 17564162
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||| ||||||||||  |||||| |||||||| ||||||    
T  17564102 aataagttgttttcataaaataagctg-tttgaataagttgttttttaaaataaggtgtttt 17564162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 17564250 - 17564311
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| ||||||||||||||||||  ||||| |||||||| ||||||    
T  17564250 aataaggtattttcataaaataagctgttttgaataagctattttttaaaataaggtgtttt 17564311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 33691392 - 33691453
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| ||||||||||||||||||  ||||| |||||||| ||||||    
T  33691392 aataaggtattttcataaaataagctgttttgaataagctattttttaaaataaggtgtttt 33691453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 34360981 - 34360920
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| ||||||||||||||||||  ||||| |||||||| ||||||    
T  34360981 aataaggtattttcataaaataagctgttttgaataagctattttttaaaataaggtgtttt 34360920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 21183111 - 21183071
Alignment:
Q  103 aataagttgtttttaaaattgatatggttaatggttcggtt 143  Q
    ||||||||||||||||||| ||||||| |||||||||||||    
T  21183111 aataagttgtttttaaaatagatatggctaatggttcggtt 21183071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 17564150 - 17564212
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    |||||| |||||| ||||||| |||||||||||||||||  |||||| ||||||||||||||||    
T  17564150 aataaggtgttttgcataaaataagctgttttgaataagttgttttt-aaaataagttgttttt 17564212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 33691272 - 33691334
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    |||||| |||||| ||||||| |||||||||||||||||  |||||| ||||||||||||||||    
T  33691272 aataaggtgttttgcataaaataagctgttttgaataagttgttttt-aaaataagttgttttt 33691334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 222529 - 222590
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    |||||||||||||   |||| |||||||||||||||||| |||||| |||||||| |||||||    
T  222529 aataagttgttttttgaaaataagctgttttgaataagcggttttt-aaaataaggtgttttt 222590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 691684 - 691745
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    |||||||||||||   |||| |||||||||||||||||| |||||| |||||||| |||||||    
T  691684 aataagttgttttttgaaaataagctgttttgaataagcggttttt-aaaataaggtgttttt 691745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 736152 - 736213
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    |||||||||||||   |||| |||||||||||||||||| |||||| |||||||| |||||||    
T  736152 aataagttgttttttgaaaataagctgttttgaataagcggttttt-aaaataaggtgttttt 736213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 860047 - 860108
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    |||||||||||||   |||| |||||||||||||||||| |||||| |||||||| |||||||    
T  860047 aataagttgttttttgaaaataagctgttttgaataagcggttttt-aaaataaggtgttttt 860108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 10904107 - 10904169
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcag-tttttaaaaataagttgtttt 115  Q
    ||||| |||||||||||||| |||||||||||||||||  | ||||| |||||||| ||||||    
T  10904107 aataaattgttttcataaaataagctgttttgaataagttgtttttttaaaataaggtgtttt 10904169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 10903917 - 10903858
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||| ||||||| ||||| |||||||||||| |||||| |||||||| ||||||    
T  10903917 aataagttgttt-cataaaataagct-ttttgaataagctgttttttaaaataaggtgtttt 10903858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 10903985 - 10904049
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagttttt--aaaaataagttgttttt 116  Q
    |||||||||||||   |||| |||||||||||||||||| ||||||   ||||||||||||||||    
T  10903985 aataagttgttttttgaaaataagctgttttgaataagctgtttttcataaaataagttgttttt 10904049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 36369413 - 36369353
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| ||||||||||||| ||| ||||| |||||||| |||||| |||||||| ||||||    
T  36369413 aataagctgttttcataaaataagttgttt-gaataagctgttttttaaaataaggtgtttt 36369353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 4885116 - 4885168
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagc-agtttttaaaaa 104  Q
    ||||||||||||| ||||||| |||||||||||||||||| | ||||||||||    
T  4885116 aataagttgttttgcataaaataagctgttttgaataagctattttttaaaaa 4885168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 141; Significance: 1e-73; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 54 - 305
Target Start/End: Complemental strand, 49705414 - 49705163
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaa-taagcagtttttaaaaataagttgtttttaaaattgatatggttaatggttcggttcggt-cgg 150  Q
    ||||||||||||| ||||||| |||||||||| || ||||  ||||| ||   ||||||||||||||||| |||| || ||||||||||||| ||| |||    
T  49705414 aataagttgttttgcataaaataagctgttttaaaataagttgttttgaa---taagttgtttttaaaatagataaggctaatggttcggtttggttcgg 49705318  T
Q  151 ttcagataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttg 250  Q
    ||| ||||||||||||||| |||||||||| ||||||| | |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||    
T  49705317 ttcggataattgtggttactaacggttcagttcggttaatgaattgttatcaaaataatggttcggttcaagaattggttaaatggttcagttaattctg 49705218  T
Q  251 atatggttcggttcggttaaccgattcgaattggtttttggttatttttgcccac 305  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  49705217 atacggttcggttcggttaaccggttcgaattggtttttggttatttttgcccac 49705163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 54 - 305
Target Start/End: Complemental strand, 23392193 - 23391942
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaa-taagcagtttttaaaaataagttgtttttaaaattgatatggttaatggttcggttcggt-cgg 150  Q
    ||||||||||||| ||||||| |||||||||| || ||||  ||||| ||   ||||||||||||||||| |||| || ||||||||||||| ||| |||    
T  23392193 aataagttgttttgcataaaataagctgttttaaaataagttgttttgaa---taagttgtttttaaaatagataaggctaatggttcggtttggttcgg 23392097  T
Q  151 ttcagataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttg 250  Q
    ||| ||||||||||||||| |||||||||| ||||||| | |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||    
T  23392096 ttcggataattgtggttactaacggttcagttcggttaatgaattgttatcaaaataatggttcggttcaagaattggttaaatggttcagttaattctg 23391997  T
Q  251 atatggttcggttcggttaaccgattcgaattggtttttggttatttttgcccac 305  Q
    ||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  23391996 atacggttcggttcggttaaccggttcgaattgatttttggttatttttgcccac 23391942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 155 - 305
Target Start/End: Original strand, 45621644 - 45621794
Alignment:
Q  155 gataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttgatat 254  Q
    ||||||||||||||| |||||||||| ||||| ||| |||||||||||||||||||||| ||||| ||||||||||||||| ||| ||||||||||||||    
T  45621644 gataattgtggttactaacggttcagttcggtcagtgaattgttatcaaaataatggttcggttcgagaattggttaaatggttcggttaattttgatat 45621743  T
Q  255 ggttcggttcggttaaccgattcgaattggtttttggttatttttgcccac 305  Q
    ||||||||| ||||||||| || ||||||||||||||||||||||| ||||    
T  45621744 ggttcggtttggttaaccggtttgaattggtttttggttatttttgtccac 45621794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 69 - 304
Target Start/End: Complemental strand, 15667142 - 15666909
Alignment:
Q  69 taaaacaagctgttttgaataagcagttttta-------aaaataagttgtttttaaaattgatatggttaatggttcggttcggtcggttcagataatt 161  Q
    ||||| ||| |||||||||||||| |||||||       |||||||| |||||||||||| | ||||||||||||||||||||||         ||||||    
T  15667142 taaaataagttgttttgaataagctgtttttatttatttaaaataagctgtttttaaaatagttatggttaatggttcggttcgg---------ataatt 15667052  T
Q  162 gtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttgatatggttcgg 261  Q
    |||||||| |||||||| | ||||||||| |||||||||||||||||| ||| | ||| | ||||||||||||  |||| |||||||||||| ||||| |    
T  15667051 gtggttactaacggttcggttcggttagtgaattgttatcaaaataatagttcgattcgaaaattggttaaatagttcaattaattttgatacggttcag 15666952  T
Q  262 ttcggttaaccgattcgaattggtttttggttatttttgccca 304  Q
    |||| ||||||| ||| | ||||||||||||||||||||||||    
T  15666951 ttcgattaaccggttcaatttggtttttggttatttttgccca 15666909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 133 - 269
Target Start/End: Original strand, 35259040 - 35259177
Alignment:
Q  133 atggttcggttcggt-cggttcagataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggtta 231  Q
    |||||| |||||||| |||||  ||||| ||||||||  || ||||| | ||||||| | || |||||||||||||||||||  |||||| |||| || |    
T  35259040 atggtttggttcggttcggtttggataactgtggttattaatggttcggttcggttaattaactgttatcaaaataatggttcagttcaaaaatttgtga 35259139  T
Q  232 aatgattcagttaattttgatatggttcggttcggtta 269  Q
    |||| |||||||||||||||||||||||||||||||||    
T  35259140 aatggttcagttaattttgatatggttcggttcggtta 35259177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 174 - 305
Target Start/End: Original strand, 27512067 - 27512198
Alignment:
Q  174 ggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttgatatggttcggttcggttaaccg 273  Q
    ||||||| ||||||||| ||||| | ||||||||||||||  |||| |||| |    ||||| |||| ||||||||||||| |||| |||||||||||||    
T  27512067 ggttcagttcggttagtgaattgctgtcaaaataatggttcagttcgagaactttcgaaatggttcaattaattttgatatagttcagttcggttaaccg 27512166  T
Q  274 attcgaattggtttttggttatttttgcccac 305  Q
     ||| |  |||||||||||||||||| |||||    
T  27512167 gttcaatatggtttttggttattttttcccac 27512198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 305
Target Start/End: Complemental strand, 9764451 - 9764383
Alignment:
Q  237 ttcagttaattttgatatggttcggttcggttaaccgattcgaattggtttttggttatttttgcccac 305  Q
    ||||||||||||||||| ||||| ||||| ||||| | ||||||||||||||||||||||||| |||||    
T  9764451 ttcagttaattttgatacggttcagttcgtttaactggttcgaattggtttttggttatttttacccac 9764383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 6583311 - 6583251
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| ||||||    
T  6583311 aataagttgttttcataaaataagctgttt-gaataagctgtttttaaaaataaggtgtttt 6583251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 6583416 - 6583356
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| ||||||    
T  6583416 aataagttgttttcataaaataagctgttt-gaataagctgtttttaaaaataaggtgtttt 6583356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 15667222 - 15667161
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||| ||||||| |||||||||||||| |||||| | |||||||||||||    
T  15667222 aataagttgttttcattaaacaagttgttttgaataagctgttttttagaataagttgtttt 15667161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 31878886 - 31878939
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||    
T  31878886 ttttcataaaagaagctgttttgaataagctgttttcaaaaataagttgttttt 31878939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 252
Target Start/End: Complemental strand, 48511778 - 48511697
Alignment:
Q  171 aacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttgat 252  Q
    |||||||||| ||||||||| ||  |||||||||||||||||  ||||||| ||||| | ||||| ||||||||||||||||    
T  48511778 aacggttcagttcggttagtgaaccgttatcaaaataatggtgcggttcaaaaattgatgaaatggttcagttaattttgat 48511697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 265
Target Start/End: Original strand, 34441996 - 34442079
Alignment:
Q  182 tcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttgatatggttcggttcg 265  Q
    ||||||| | || |||||||||||||||||||  || ||| |||| || ||||  |||||||||||||||||||||||||||||    
T  34441996 tcggttaattaagtgttatcaaaataatggttcagtccaaaaattagtgaaatagttcagttaattttgatatggttcggttcg 34442079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 23517775 - 23517829
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataag 108  Q
    |||||||||||||||||||| |||||||||||||||||  |||||| ||||||||    
T  23517775 aataagttgttttcataaaataagctgttttgaataagttgttttttaaaataag 23517829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 26464468 - 26464415
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    ||||||||||| |||||||||||||||||  ||||| |||||||||||||||||    
T  26464468 ttttcataaaagaagctgttttgaataagttgttttcaaaaataagttgttttt 26464415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 38936577 - 38936517
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||| ||||||||||| |||||| |||||||| ||||||    
T  38936577 aataagttgttttcataaaataagctg-tttgaataagctgttttttaaaataaggtgtttt 38936517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 16041386 - 16041322
Alignment:
Q  241 gttaattttgatatggttcggttcggttaaccgattcgaattggtttttggttatttttgcccac 305  Q
    ||||||||| |||||| ||||||||||| |||| |||| ||||||||||| ||| ||||||||||    
T  16041386 gttaattttaatatggatcggttcggttgaccggttcggattggtttttgattaattttgcccac 16041322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 22771969 - 22771909
Alignment:
Q  244 aattttgatatggttcggttcggttaaccgattcgaattggtttttggttatttttgccca 304  Q
    |||||| ||||||||| ||||||||||||  |||| || ||||||||||||||||||||||    
T  22771969 aattttaatatggttcagttcggttaaccagttcggatcggtttttggttatttttgccca 22771909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 38936324 - 38936272
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    ||||||||||| |||||||||||||||||| ||||| ||||||||| ||||||    
T  38936324 ttttcataaaagaagctgttttgaataagctgttttcaaaaataagctgtttt 38936272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 46172886 - 46172956
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagttttt---aaaaataagttgtttttaaaat 121  Q
    |||||||||||||||||||| |||||||||||||||||  ||||||    |||||||||||||||| ||||    
T  46172886 aataagttgttttcataaaataagctgttttgaataagttgtttttgcataaaataagttgtttttcaaat 46172956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 305
Target Start/End: Original strand, 48997123 - 48997187
Alignment:
Q  241 gttaattttgatatggttcggttcggttaaccgattcgaattggtttttggttatttttgcccac 305  Q
    ||||||||| || |||||| ||||||||||||||||||| ||  ||||||| |||||||||||||    
T  48997123 gttaattttaatttggttcagttcggttaaccgattcgatttaatttttggatatttttgcccac 48997187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 6583118 - 6583055
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    ||||||||||||| ||||||| ||| |||||||||||||| ||||| ||||||||||| |||||    
T  6583118 aataagttgtttttcataaaagaagttgttttgaataagctgttttcaaaaataagttattttt 6583055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 40140497 - 40140450
Alignment:
Q  258 tcggttcggttaaccgattcgaattggtttttggttatttttgcccac 305  Q
    |||||||||||||||| |||| ||||||||||||||| ||||||||||    
T  40140497 tcggttcggttaaccggttcggattggtttttggttaattttgcccac 40140450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 46172438 - 46172391
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagtt 110  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  46172438 ttttcataaaagaagctgttttgaataagctgttttaaaaaataagtt 46172391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 27511723 - 27511785
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    ||||||||||||| |||||||  |||||||||||||||||  |||||||||||||| ||||||    
T  27511723 aataagttgttttgcataaaattagctgttttgaataagctatttttaaaaataagatgtttt 27511785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 6582931 - 6582870
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| ||||||||||||||||||  ||||| |||||||| ||||||    
T  6582931 aataaggtattttcataaaataagctgttttgaataagctattttttaaaataaggtgtttt 6582870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 6583484 - 6583548
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagttttt--aaaaataagttgttttt 116  Q
    |||||||||||||   |||| |||||||||||||||||||||||||   ||||||||||||||||    
T  6583484 aataagttgttttttgaaaataagctgttttgaataagcagtttttcataaaataagttgttttt 6583548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 35653021 - 35653082
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| |||||||||||||||||| |||| | |||||||| ||||||    
T  35653021 aataaggtattttcataaaataagctgttttgaataagctgtttcttaaaataagctgtttt 35653082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 38936874 - 38936911
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataag 91  Q
    |||||||||||||||||||| |||||||||||||||||    
T  38936874 aataagttgttttcataaaataagctgttttgaataag 38936911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 23516469 - 23516419
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaa 104  Q
    |||||| ||||||||||||| |||| |||||||||||||  ||||||||||    
T  23516469 aataaggtgttttcataaaataagcggttttgaataagctatttttaaaaa 23516419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 23516868 - 23516807
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcag-tttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||| ||||||||||  | |||||||||||||| ||||||    
T  23516868 aataagttgttttcataaaataagctg-tttgaataagttgttttttaaaaataaggtgtttt 23516807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 26464230 - 26464180
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaa 104  Q
    |||||| ||||||||||||| |||| |||||||||||||  ||||||||||    
T  26464230 aataaggtgttttcataaaataagcggttttgaataagctatttttaaaaa 26464180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 26466213 - 26466267
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataag 108  Q
    |||||||| ||||||||||| |||||||||||||||||   ||||| ||||||||    
T  26466213 aataagttattttcataaaataagctgttttgaataagttattttttaaaataag 26466267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 35652236 - 35652182
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataag 108  Q
    |||||||||||||||||||| ||| ||| |||||||||  |||||| ||||||||    
T  35652236 aataagttgttttcataaaataagttgtcttgaataagttgttttttaaaataag 35652182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 35652346 - 35652292
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataag 108  Q
    |||||||||||||||||||| ||| ||| |||||||||  |||||| ||||||||    
T  35652346 aataagttgttttcataaaataagttgtcttgaataagttgttttttaaaataag 35652292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 35652619 - 35652558
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    |||||||||||||   |||| |||||||||||||||||| |||||| |||||||| |||||||    
T  35652619 aataagttgttttttgaaaataagctgttttgaataagctgttttt-aaaataaggtgttttt 35652558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 35652847 - 35652901
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagc-agtttttaaaaataagttgttttt 116  Q
    ||||||||||| ||| |||||||||||||| | |||| |||||||||||||||||    
T  35652847 ttttcataaaagaagttgttttgaataagctatttttcaaaaataagttgttttt 35652901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 35653070 - 35653120
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaa 104  Q
    |||||| ||||||||||||| |||| |||||||||||||  ||||||||||    
T  35653070 aataagctgttttcataaaataagcggttttgaataagctatttttaaaaa 35653120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 99
Target Start/End: Complemental strand, 38936367 - 38936321
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagttttt 99  Q
    ||||||||||||| ||||||| |||||||||||||||||| ||||||    
T  38936367 aataagttgtttttcataaaagaagctgttttgaataagctgttttt 38936321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 46172624 - 46172562
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    ||||||||||||| ||||||| ||||| |||| |||||||  ||||| |||||||||||||||    
T  46172624 aataagttgttttgcataaaataagctattttaaataagctattttttaaaataagttgtttt 46172562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 55374964 - 55375026
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    ||||||||||||| ||||||| ||| |||||||||||||  ||||||  ||||||||||||||    
T  55374964 aataagttgtttttcataaaataagttgttttgaataagttgtttttttaaataagttgtttt 55375026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 5837079 - 5837038
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaa 104  Q
    ||||||||||| |||||||||||||||||| |||||| ||||    
T  5837079 ttttcataaaataagctgttttgaataagctgtttttcaaaa 5837038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 23516681 - 23516628
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    ||||||||||| |||||||||||||||| |  |||| ||||||||||| |||||    
T  23516681 ttttcataaaagaagctgttttgaataaactattttcaaaaataagttattttt 23516628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 26464279 - 26464218
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| |||||||||||||||||  |||| | |||||||| ||||||    
T  26464279 aataaggtattttcataaaataagctgttttgaataagatgtttcttaaaataaggtgtttt 26464218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 46172244 - 46172183
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| |||||||||||||||| |  ||||| |||||||| ||||||    
T  46172244 aataaggtattttcataaaataagctgttttgaataaactattttttaaaataaggtgtttt 46172183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 46172722 - 46172662
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||| ||||  |||||| || |||||||| ||||||||||||||| ||||||    
T  46172722 aataagttgttttcttaaactaagctgctt-gaataagctgtttttaaaaataaggtgtttt 46172662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 105
Target Start/End: Original strand, 30819313 - 30819364
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaat 105  Q
    ||||||||||||| ||||||  |||||||||||||||||| ||||||||||||    
T  30819313 aataagttgttttgcataaat-aagctgttttgaataagctgtttttaaaaat 30819364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 115
Target Start/End: Original strand, 38936741 - 38936781
Alignment:
Q  75 aagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||| |||||| |||||||| ||||||    
T  38936741 aagctgttttgaataagctgttttttaaaataaggtgtttt 38936781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 1e-73; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 54 - 305
Target Start/End: Complemental strand, 17563061 - 17562804
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaataagt----tgtttttaaaattgatatggttaatggttcggttcggt- 147  Q
    ||||||||||||| ||||||| ||| |||||||||||||| |||||||||||||| |    | |||||||||| || ||||||||||||||| ||| ||     
T  17563061 aataagttgttttgcataaaataagttgttttgaataagctgtttttaaaaataaataaactatttttaaaatagaaatggttaatggttcgattcagtt 17562962  T
Q  148 cggttcagataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaatt 247  Q
    |||||| ||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||    
T  17562961 cggttcggataattgtggttactaacggttcagttcggttagtgaattgttatcaaaataatggttcggttcgagaattggttaaatggttcagttaatt 17562862  T
Q  248 ttgatatggttcggttcggttaaccgattcgaattggtttttggttatttttgcccac 305  Q
    |||||| ||||||||||| ||||||  ||||||||||||||||||||||||| |||||    
T  17562861 ttgatacggttcggttcgattaacctgttcgaattggtttttggttattttttcccac 17562804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 54 - 305
Target Start/End: Original strand, 43178209 - 43178460
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaa-taagcagtttttaaaaataagttgtttttaaaattgatatggttaatggttcggttcggt-cgg 150  Q
    ||||||||||||| ||||||| |||||||||| || ||||  ||||| ||   ||||||||||||||||| |||| || ||||||||||||| ||| |||    
T  43178209 aataagttgttttgcataaaataagctgttttaaaataagttgttttgaa---taagttgtttttaaaatagataaggctaatggttcggtttggttcgg 43178305  T
Q  151 ttcagataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttg 250  Q
    ||| ||||||||||||||| |||||||||| ||||||| | |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||    
T  43178306 ttcggataattgtggttactaacggttcagttcggttaatgaattgttatcaaaataatggttcggttcaagaattggttaaatggttcagttaattctg 43178405  T
Q  251 atatggttcggttcggttaaccgattcgaattggtttttggttatttttgcccac 305  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43178406 atacggttcggttcggttaaccggttcgaattggtttttggttatttttgcccac 43178460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 368 - 483
Target Start/End: Original strand, 29483306 - 29483420
Alignment:
Q  368 gacacaaatacgacaccatgggtagtttggatatttccaccattaagcaggggcagttttgtcaaatccccacagacccatcttcttcatactcccatct 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||  | || |||||    
T  29483306 gacacaaatacgacaccatgggtagtttggatatttccaccattaagcaggggtagttttgtcaaat-cccatagacccatcttcttcccaatcacatct 29483404  T
Q  468 tccctgcattctctct 483  Q
    || || ||||||||||    
T  29483405 tctctacattctctct 29483420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 17563110 - 17563049
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    ||||| ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  17563110 aataatttgtttttataaaacaaactgttttgaataagctgtttttaaaaataagttgtttt 17563049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 9623484 - 9623537
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||    
T  9623484 ttttcataaaagaagctgttttgaataagctgttttcaaaaataagttgttttt 9623537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 45369274 - 45369355
Alignment:
Q  182 tcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttgatatggttcggtt 263  Q
    ||||||| | || |||||||||||||||||||  |||||| |||| || ||||| |||||||||||||||||||||| ||||    
T  45369274 tcggttaattaactgttatcaaaataatggttcagttcaaaaatttgtgaaatggttcagttaattttgatatggtttggtt 45369355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 24133930 - 24133993
Alignment:
Q  206 taatggtttggttcaagaattggttaaatgattcagttaattttgatatggttcggttcggtta 269  Q
    ||||||||  |||||| |||| || ||||| |||||||||||||||||||||||||||||||||    
T  24133930 taatggttcagttcaaaaatttgtgaaatggttcagttaattttgatatggttcggttcggtta 24133993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 41193599 - 41193545
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataag 108  Q
    |||||||||||||||||||| |||||||||||||||||  |||||| ||||||||    
T  41193599 aataagttgttttcataaaataagctgttttgaataagttgttttttaaaataag 41193545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 2153324 - 2153263
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||||||||||||||   ||||| |||||||| ||||||    
T  2153324 aataagttgttttcataaaataagctgttttgaataagttattttttaaaataaggtgtttt 2153263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 41194557 - 41194617
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||| ||||||||||| |||||| |||||||| ||||||    
T  41194557 aataagttgttttcataaaataagctg-tttgaataagctgttttttaaaataaggtgtttt 41194617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 31366236 - 31366297
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| ||||||||||| |||||  | |||| |||||||| ||||||    
T  31366236 aataagttgttttcataaaataagctgttttgtataagttgctttttaaaataaggtgtttt 31366297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 41194707 - 41194760
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    ||||||||||| ||||||||||||||||||  |||| ||||||||||| |||||    
T  41194707 ttttcataaaataagctgttttgaataagctattttcaaaaataagttattttt 41194760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 9623658 - 9623710
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    ||||||||||| |||||||||||||||||| |||| | |||||||| ||||||    
T  9623658 ttttcataaaataagctgttttgaataagctgtttcttaaaataaggtgtttt 9623710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 31366056 - 31365997
Alignment:
Q  55 ataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    ||||||||||||||||||| ||| ||||| |||||||| |||||| |||||||| ||||||    
T  31366056 ataagttgttttcataaaataagttgttt-gaataagctgttttttaaaataaggtgtttt 31365997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 43177598 - 43177547
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaa 104  Q
    ||||||||||||| ||||||| |||||||||||||||||| |||||| ||||    
T  43177598 aataagttgttttgcataaaataagctgttttgaataagctgttttttaaaa 43177547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 12997661 - 12997600
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | |||| |||||| ||||||||||||||||||  ||||| |||||||| ||||||    
T  12997661 aataagatatttttataaaataagctgttttgaataagctattttttaaaataaggtgtttt 12997600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 31366098 - 31366158
Alignment:
Q  55 ataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    |||||||||||||  |||| ||||| |||||||||||| |||||| |||||||| |||||||    
T  31366098 ataagttgttttctgaaaataagctattttgaataagctgttttt-aaaataaggtgttttt 31366158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 79 - 310
Target Start/End: Original strand, 31846423 - 31846647
Alignment:
Q  79 tgttttgaataagcagtttttaaaaataagttgtttttaaaattgatatggttaatggttcggttcggtcggttcagataattgtggttaccaacggttc 178  Q
    ||||||||||||||  ||||| |||||||  ||||||  |||| || | ||||||||||||||||||||    ||  |||||||||||||| ||||||||    
T  31846423 tgttttgaataagctattttttaaaataaactgtttt--aaatagaaa-ggttaatggttcggttcggt----tcgaataattgtggttactaacggttc 31846515  T
Q  179 aggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttgatatggttcggttcggttaaccgattcg 278  Q
    || ||||||||| ||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||    
T  31846516 agttcggttagtgaattgttatcaaaataatggtttcgttcgagaattggttaaatggttcagttaattttgatatggttcggttcggttaaccagttcg 31846615  T
Q  279 aattggtttttggttatttttgcccacgctta 310  Q
    ||||||||||||||||||||||||||| ||||    
T  31846616 aattggtttttggttatttttgcccaccctta 31846647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 368 - 482
Target Start/End: Original strand, 22616330 - 22616444
Alignment:
Q  368 gacacaaatacgacaccatgggtagtttggatatttccaccattaagcaggggcagttttgtcaaatccccacagacccatcttcttcatactcccatct 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  22616330 gacacaaatacgacaccatgggtagtttggatatttccaccattaagcaggggtagttttgtcaaatccccatagacccatcttcttcatactcccatct 22616429  T
Q  468 tccctgcattctctc 482  Q
    |||||||||||||||    
T  22616430 tccctgcattctctc 22616444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 182 - 305
Target Start/End: Original strand, 46401182 - 46401305
Alignment:
Q  182 tcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttgatatggttcggttcggttaaccgattcgaat 281  Q
    |||| |||| |||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||  |||    
T  46401182 tcggatagtgaattgttatcaaaataatggttcggttcgggaattggttaaatggttcagttaattttgatatggttcggttcggttaaccggtttaaat 46401281  T
Q  282 tggtttttggttatttttgcccac 305  Q
    ||| ||||||||||||||||||||    
T  46401282 tgggttttggttatttttgcccac 46401305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 368 - 483
Target Start/End: Complemental strand, 41970723 - 41970609
Alignment:
Q  368 gacacaaatacgacaccatgggtagtttggatatttccaccattaagcaggggcagttttgtcaaatccccacagacccatcttcttcatactcccatct 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||| |||||||||||||||  | ||||||||    
T  41970723 gacacaaatacgacaccatgggtagtttggatatttccaccattaagtaggggtagttttgtcaaat-cccatagacccatcttcttcccaatcccatct 41970625  T
Q  468 tccctgcattctctct 483  Q
    || |||||||||||||    
T  41970624 tctctgcattctctct 41970609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 368 - 455
Target Start/End: Original strand, 38364183 - 38364269
Alignment:
Q  368 gacacaaatacgacaccatgggtagtttggatatttccaccattaagcaggggcagttttgtcaaatccccacagacccatcttcttc 455  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  38364183 gacacaaatacgacaccatgggtagtttggatatttccaccattaagcaggggtagttttgtcaaat-cccatagacccatcttcttc 38364269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 116 - 310
Target Start/End: Original strand, 17189288 - 17189478
Alignment:
Q  116 taaaattgatatggttaatggttcggttcggtcggttcagataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttg 215  Q
    |||||| |||||||||| ||||| ||||||||    || || ||| | |||||  |||||||||| | ||||||| |||||||||||||||||| ||  |    
T  17189288 taaaatagatatggttactggtttggttcggt----tcggacaatggaggttattaacggttcagtttggttagtgaattgttatcaaaataattgtccg 17189383  T
Q  216 gttcaagaattggttaaatgattcagttaattttgatatggttcggttcggttaaccgattcgaattggtttttggttatttttgcccacgctta 310  Q
    |||  ||||||||| ||||| |||| ||||||| ||||  |||||||| ||||||||| || || ||||||||||||||||||||||||| ||||    
T  17189384 gtttgagaattggtaaaatggttcaattaatttagataccgttcggtttggttaaccggttagatttggtttttggttatttttgcccaccctta 17189478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 182 - 305
Target Start/End: Complemental strand, 32027494 - 32027371
Alignment:
Q  182 tcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttgatatggttcggttcggttaaccgattcgaat 281  Q
    ||||||| | || ||||||||  |||||||||  |||||| |||| || ||||  ||||||||||||||||||||||||||||| ||||| | ||||  |    
T  32027494 tcggttaattaactgttatcattataatggttcagttcaaaaattcgtgaaattgttcagttaattttgatatggttcggttcgattaacaggttcggtt 32027395  T
Q  282 tggtttttggttatttttgcccac 305  Q
     |||| ||||||| ||||||||||    
T  32027394 cggttattggttaattttgcccac 32027371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 28682929 - 28682983
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataag 108  Q
    |||||||||||||||||||| |||||||||||||||||  |||||| ||||||||    
T  28682929 aataagttgttttcataaaataagctgttttgaataagttgttttttaaaataag 28682983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 10165784 - 10165844
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||| || |||||||| ||||||||||||||| ||||||    
T  10165784 aataagttgttttcataaaataagctgctt-gaataagctgtttttaaaaataaggtgtttt 10165844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 40474966 - 40474913
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    ||||||||||| ||| |||||||||||||| ||||| |||||||||||||||||    
T  40474966 ttttcataaaagaagttgttttgaataagctgttttcaaaaataagttgttttt 40474913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 40475200 - 40475140
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||| ||||||||||| |||||| |||||||| ||||||    
T  40475200 aataagttgttttcataaaataagctg-tttgaataagctgttttttaaaataaggtgtttt 40475140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 45919060 - 45918999
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| ||||| |||||||||||  |||||| |||||||| ||||||    
T  45919060 aataagttgttttcataaaataagctattttgaataagttgttttttaaaataaggtgtttt 45918999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 28682613 - 28682559
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagt 109  Q
    |||||||||||||||||||| |||||| ||||||||||| |||||| |||||||||    
T  28682613 aataagttgttttcataaaataagctg-tttgaataagctgtttttcaaaataagt 28682559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 28682422 - 28682357
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcag--tttttaaaaataagttgttttt 116  Q
    ||||||||||||| ||||||  |||||||||||||||||| |  ||||||||||||||||||||||    
T  28682422 aataagttgtttttcataaacgaagctgttttgaataagctgtttttttaaaaataagttgttttt 28682357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 32746842 - 32746896
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataag 108  Q
    |||||||||||||||||||| ||||| |||||||||||  |||||| ||||||||    
T  32746842 aataagttgttttcataaaataagctcttttgaataagttgttttttaaaataag 32746896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 46401099 - 46401172
Alignment:
Q  69 taaaacaagctgttttgaataagcagtttttaaaaataagttgtttttaaaattgatatggttaatggttcggtt 143  Q
    ||||| ||| |||||||||||||  |||| | |||||||||||||||| |||| |||||| ||||||||||||||    
T  46401099 taaaataagttgttttgaataagttgtttattaaaataagttgttttt-aaatagatatgcttaatggttcggtt 46401172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 10165625 - 10165588
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataag 91  Q
    |||||||||||||||||||| |||||||||||||||||    
T  10165625 aataagttgttttcataaaataagctgttttgaataag 10165588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 10166136 - 10166197
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| ||||||||||||||||||  ||||| |||||||| ||||||    
T  10166136 aataaggtattttcataaaataagctgttttgaataagctatttttcaaaataaggtgtttt 10166197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 35086974 - 35086913
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| ||||||||||||||||||  ||||| |||||||| ||||||    
T  35086974 aataaggtattttcataaaataagctgttttgaataagctattttttaaaataaggtgtttt 35086913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 40474787 - 40474726
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| ||||||||||||||||||  ||||| |||||||| ||||||    
T  40474787 aataaggtattttcataaaataagctgttttgaataagctattttttaaaataagatgtttt 40474726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 43986187 - 43986134
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    |||| |||||| |||||||||||||||||  ||||| |||||||||||||||||    
T  43986187 ttttaataaaataagctgttttgaataagttgttttcaaaaataagttgttttt 43986134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 45919596 - 45919657
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| ||||||||||||||||||  ||||| |||||||| ||||||    
T  45919596 aataaggtattttcataaaataagctgttttgaataagctattttttaaaataaggtgtttt 45919657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 22628481 - 22628549
Alignment:
Q  145 ggtcggttcagataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtt 213  Q
    ||||||||| | ||||||| ||||  ||| |||||| || |||||| ||||||||||||||||||||||    
T  22628481 ggtcggttcggttaattgttgttattaacagttcagttcagttagtgaattgttatcaaaataatggtt 22628549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 32746417 - 32746365
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    ||||||||||| ||||||||||||||||||  |||| ||||||||||| ||||    
T  32746417 ttttcataaaataagctgttttgaataagctattttcaaaaataagttttttt 32746365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 33381181 - 33381129
Alignment:
Q  56 taagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataag 108  Q
    |||||||||||||||||| ||| |||||||||||||  |||||| ||||||||    
T  33381181 taagttgttttcataaaataagatgttttgaataagttgttttttaaaataag 33381129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 22628228 - 22628290
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    ||||||||||||| ||||||| ||| ||||||| |||||| |||||||||| ||||||||||||    
T  22628228 aataagttgttttgcataaaataagttgttttgtataagctgtttttaaaa-taagttgttttt 22628290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 35087079 - 35087017
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    |||||| |||||| ||||||| |||||||||||||||||  |||||| ||||||||||||||||    
T  35087079 aataaggtgttttgcataaaataagctgttttgaataagttgttttt-aaaataagttgttttt 35087017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 28682205 - 28682155
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaa 104  Q
    |||||| ||||||||||||| |||| |||||||||||||  ||||||||||    
T  28682205 aataaggtgttttcataaaataagcggttttgaataagctatttttaaaaa 28682155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 33381744 - 33381790
Alignment:
Q  70 aaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    |||| |||||||||||||||| | ||||| |||||||||||||||||    
T  33381744 aaaaaaagctgttttgaataaactgttttcaaaaataagttgttttt 33381790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 33381966 - 33382016
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaa 104  Q
    |||||| ||||||||||||| |||| |||||||||||||  ||||||||||    
T  33381966 aataaggtgttttcataaaataagcggttttgaataagctatttttaaaaa 33382016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 302
Target Start/End: Original strand, 27859635 - 27859696
Alignment:
Q  241 gttaattttgatatggttcggttcggttaaccgattcgaattggtttttggttatttttgcc 302  Q
    |||||||||  ||||| |||||||||||||||| |||   |||||||||||||| |||||||    
T  27859635 gttaattttagtatggatcggttcggttaaccggttcattttggtttttggttaattttgcc 27859696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 40474876 - 40474828
Alignment:
Q  67 cataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    ||||||| |||||||||||||||||  |||||| ||||||||||||||||    
T  40474876 cataaaataagctgttttgaataagttgttttt-aaaataagttgttttt 40474828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 17189129 - 17189173
Alignment:
Q  60 ttgttttcataaaacaagctgttttgaataagcagtttttaaaaa 104  Q
    |||||||||||||| ||| |||||||||||||  |||||||||||    
T  17189129 ttgttttcataaaataagttgttttgaataagttgtttttaaaaa 17189173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 2e-59; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 54 - 305
Target Start/End: Complemental strand, 31507033 - 31506762
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt--------------taaaattgatatggttaatggttc 139  Q
    |||||||| ||||||||||||||| |||||||||||||| |||||| |||||||||||||||              |||||| ||||||||||||||||     
T  31507033 aataagttattttcataaaacaagttgttttgaataagctgttttttaaaataagttgttttaaataaactgtttttaaaatagatatggttaatggttt 31506934  T
Q  140 ggttcggt-cggttcagataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgatt 238  Q
    |||| ||| |||||| ||||||||||||||| || ||||||| ||||||||| || |||| |||||||||||||| ||||| ||||||||||||||| ||    
T  31506933 ggtttggttcggttcggataattgtggttactaatggttcagttcggttagtgaactgttttcaaaataatggttcggttcgagaattggttaaatggtt 31506834  T
Q  239 cagttaattttgatatggttcggttc-----ggttaaccgattcgaattggtttttggttatttttgcccac 305  Q
    ||||||||||||||| ||||||||||     ||||||||| ||| |||||||||||||||||||||||||||    
T  31506833 cagttaattttgatacggttcggttcggttcggttaaccggttcaaattggtttttggttatttttgcccac 31506762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 103 - 304
Target Start/End: Original strand, 8466421 - 8466618
Alignment:
Q  103 aataagttgtttttaaaattgatatggttaatggttcggttcggtcggttcagataattgtggttaccaacggttcaggtcggttagtaaattgttatca 202  Q
    |||||| | |||||||||| ||||||||||||||||||||| |||    || ||||||||||||||| |||||||||| ||||||||| || |||||| |    
T  8466421 aataagctctttttaaaatagatatggttaatggttcggtttggt----tcggataattgtggttactaacggttcagttcggttagtgaactgttatta 8466516  T
Q  203 aaataatggtttggttcaagaattggttaaatgattcagttaattttgatatggttcggttcggttaaccgattcgaattggtttttggttatttttgcc 302  Q
    ||||||||||| | ||||||||||||||||||| | |||||||||||||||  |||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  8466517 aaataatggttcgattcaagaattggttaaatggtccagttaattttgatacagttcggttcgattaaccgattcgaattggtttatggatatttttgcc 8466616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 124 - 305
Target Start/End: Complemental strand, 42545273 - 42545092
Alignment:
Q  124 atatggttaatggttcggttcggt-cggttcagataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaag 222  Q
    ||||||||| |||||||||||||| | |||  ||||||| ||||||  || ||||| | ||||||| | || |||||||||||||||||||  ||||||     
T  42545273 atatggtta-tggttcggttcggttcagtttggataattatggttattaatggttcggttcggttaattaactgttatcaaaataatggttcagttcaaa 42545175  T
Q  223 aattggttaaatgattcagttaattttgatatggttcggttcggttaaccgattcgaattggtttttggttatttttgcccac 305  Q
    |||  || ||||| ||||||||||||||||||||||||||| |||||| |||||||  |||||| ||||||| ||||||||||    
T  42545174 aatctgtgaaatggttcagttaattttgatatggttcggttaggttaaacgattcggtttggttattggttaattttgcccac 42545092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 319 - 366
Target Start/End: Complemental strand, 5818928 - 5818881
Alignment:
Q  319 tattaaatttgtgtgcccttcttccatgtgtgctagtactacggagct 366  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5818928 tattaaatttgtgtgcccttcttccatgtgtgctagtactatggagct 5818881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 31070139 - 31070200
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||||||||||||||  |||||| |||||||| ||||||    
T  31070139 aataagttgttttcataaaataagctgttttgaataagttgttttttaaaataaggtgtttt 31070200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 3523881 - 3523942
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||||||||||||||  | |||| |||||||| ||||||    
T  3523881 aataagttgttttcataaaataagctgttttgaataagttgctttttaaaataaggtgtttt 3523942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 26817727 - 26817787
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||| ||||||||||| |||||| |||||||| ||||||    
T  26817727 aataagttgttttcataaaataagctg-tttgaataagctgttttttaaaataaggtgtttt 26817787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 31508208 - 31508260
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    ||||||||||| || || |||||||||||| ||||||||||||||||||||||    
T  31508208 ttttcataaaataaacttttttgaataagctgtttttaaaaataagttgtttt 31508260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 28748383 - 28748320
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    ||||||||||||| ||||||| ||| |||||||||||||  ||||| |||||||||||||||||    
T  28748383 aataagttgtttttcataaaagaagttgttttgaataagttgttttcaaaaataagttgttttt 28748320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 3523702 - 3523642
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| ||| ||||| |||||||| |||||| |||||||| ||||||    
T  3523702 aataagttgttttcataaaataagttgttt-gaataagctgttttttaaaataaggtgtttt 3523642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 31069999 - 31069939
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||| ||||||||||| |||||| |||| ||| ||||||    
T  31069999 aataagttgttttcataaaataagctg-tttgaataagctgttttttaaaacaaggtgtttt 31069939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 42906146 - 42906183
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataag 91  Q
    |||||||||||||||||||| |||||||||||||||||    
T  42906146 aataagttgttttcataaaataagctgttttgaataag 42906183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 8465578 - 8465526
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    ||||||||||| ||||| || ||||||||| |||||| |||||||||||||||    
T  8465578 ttttcataaaataagcttttatgaataagctgttttttaaaataagttgtttt 8465526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 115
Target Start/End: Original strand, 8466246 - 8466281
Alignment:
Q  80 gttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||||||||||||    
T  8466246 gttttgaataagcagttttttaaaataagttgtttt 8466281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 32956687 - 32956737
Alignment:
Q  67 cataaaacaagctgttttgaataagcag--tttttaaaaataagttgtttt 115  Q
    |||||||  |||||||||||||||||||  |||||||||||||||||||||    
T  32956687 cataaaattagctgttttgaataagcagtttttttaaaaataagttgtttt 32956737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 31069717 - 31069655
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| |||||| ||||||| |||||||||||||||||  |||||| |||||||| ||||||    
T  31069717 aataaggtgttttgcataaaataagctgttttgaataagttgttttttaaaataaggtgtttt 31069655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 28748879 - 28748916
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataag 91  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  28748879 aataagttgttttcataaaataagctgtttggaataag 28748916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 115
Target Start/End: Original strand, 32956859 - 32956900
Alignment:
Q  75 aagctgttttgaataagcag-tttttaaaaataagttgtttt 115  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  32956859 aagctgttttgaataagctgttttttaaaaataagttgtttt 32956900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 9270981 - 9270929
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaat 105  Q
    ||||||||||||| ||||||| ||| |||||||||||||| |||||| |||||    
T  9270981 aataagttgttttgcataaaaaaagttgttttgaataagctgtttttgaaaat 9270929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 26817898 - 26817958
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttt 114  Q
    |||||| | ||||||||||| |||||||||||||||| |  ||||| |||||||| |||||    
T  26817898 aataaggtattttcataaaataagctgttttgaataatctattttttaaaataaggtgttt 26817958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 42908104 - 42908144
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaa 103  Q
    ||||||||||| |||||||||||||||||  ||||||||||    
T  42908104 ttttcataaaataagctgttttgaataagttgtttttaaaa 42908144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 3e-58; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 368 - 490
Target Start/End: Complemental strand, 26209914 - 26209792
Alignment:
Q  368 gacacaaatacgacaccatgggtagtttggatatttccaccattaagcaggggcagttttgtcaaatccccacagacccatcttcttcatactcccatct 467  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26209914 gacacaaatacgacaccatgggtagtttggatatttccaccattaagcaggggcagttttgtcaaatccccacagacccatcttcttcctactcccatct 26209815  T
Q  468 tccctgcattctctctgctcctc 490  Q
    ||||||||||||||||| |||||    
T  26209814 tccctgcattctctctgttcctc 26209792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 368 - 484
Target Start/End: Complemental strand, 16136723 - 16136607
Alignment:
Q  368 gacacaaatacgacaccatgggtagtttggatatttccaccattaagcaggggcagttttgtcaaatccccacagacccatcttcttcatactcccatct 467  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  16136723 gacacaaatacgacaccatgggtagtttggatatttccaccattaagcaggggcagttttgtcaaatccccacagacccatcttcttcctacttccatct 16136624  T
Q  468 tccctgcattctctctg 484  Q
    |||||||||||||||||    
T  16136623 tccctgcattctctctg 16136607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 790874 - 790821
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||    
T  790874 ttttcataaaagaagctgttttgaataagctgttttcaaaaataagttgttttt 790821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 22872014 - 22871961
Alignment:
Q  63 ttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||    
T  22872014 ttttcataaaagaagctgttttgaataagctgttttcaaaaataagttgttttt 22871961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 24918067 - 24918006
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||||||| ||||||||| |||| |||||| |||||||||| ||||    
T  24918067 aataagttgttttcataaaacaagttgttttgaaaaagctgttttttaaaataagttttttt 24918006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 51235493 - 51235432
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||||||||||||||  |||||| |||||||| ||||||    
T  51235493 aataagttgttttcataaaataagctgttttgaataagttgttttttaaaataaggtgtttt 51235432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 24187411 - 24187472
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||||||||||||||  | |||| |||||||| ||||||    
T  24187411 aataagttgttttcataaaataagctgttttgaataagttgctttttaaaataaggtgtttt 24187472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 27841940 - 27841879
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||||||||||||||  | |||| |||||||| ||||||    
T  27841940 aataagttgttttcataaaataagctgttttgaataagttgctttttaaaataaggtgtttt 27841879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 32714881 - 32714821
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||| ||||||||||| ||||||||| |||||||| |||||| |||||||||||||||    
T  32714881 aataagtttttttcataaaataagctgttt-gaataagctgttttttaaaataagttgtttt 32714821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 34386942 - 34386881
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||||||||||||||  | |||| |||||||| ||||||    
T  34386942 aataagttgttttcataaaataagctgttttgaataagttgctttttaaaataaggtgtttt 34386881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 34394373 - 34394434
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||||||||||||||  | |||| |||||||| ||||||    
T  34394373 aataagttgttttcataaaataagctgttttgaataagttgctttttaaaataaggtgtttt 34394434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 51235850 - 51235911
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| ||||||||||||||||||  |||||||||||||| ||||||    
T  51235850 aataaggtattttcataaaataagctgttttgaataagctatttttaaaaataaggtgtttt 51235911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 8066220 - 8066158
Alignment:
Q  54 aataagttgttttca-taaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    ||||||||||||| | ||||| ||| |||||||||||||| ||||||||||||||| ||||||    
T  8066220 aataagttgttttaaataaaataagttgttttgaataagctgtttttaaaaataaggtgtttt 8066158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 441
Target Start/End: Original strand, 14244659 - 14244733
Alignment:
Q  368 gacacaaatacgacaccatgggtagtttggatatttccaccattaagca-ggggcagttttgtcaaatccccaca 441  Q
    ||||||||||| |||||||||  |||||||| |||||  |||| ||||| |||||||||||||||||||| ||||    
T  14244659 gacacaaatacaacaccatggacagtttggacatttcatccataaagcatggggcagttttgtcaaatcctcaca 14244733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 790686 - 790625
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| ||||||||||||||||||  ||||| |||||||| ||||||    
T  790686 aataaggtattttcataaaataagctgttttgaataagctattttttaaaataaggtgtttt 790625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 791172 - 791209
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataag 91  Q
    |||||||||||||||||||| |||||||||||||||||    
T  791172 aataagttgttttcataaaataagctgttttgaataag 791209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 24187228 - 24187168
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| ||| ||||| |||||||| |||||| |||||||| ||||||    
T  24187228 aataagttgttttcataaaataagttgttt-gaataagctgttttttaaaataaggtgtttt 24187168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 27842122 - 27842182
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| ||| || ||||||||||| |||||| |||||||| ||||||    
T  27842122 aataagttgttttcataaaataagttg-tttgaataagctgttttttaaaataaggtgtttt 27842182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 34387123 - 34387183
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| ||| || ||||||||||| |||||| |||||||| ||||||    
T  34387123 aataagttgttttcataaaataagttg-tttgaataagctgttttttaaaataaggtgtttt 34387183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 34394187 - 34394127
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| ||| ||||| |||||||| |||||| |||||||| ||||||    
T  34394187 aataagttgttttcataaaataagttgttt-gaataagctgttttttaaaataaggtgtttt 34394127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 51235697 - 51235757
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||| |||||||||||  ||||| |||||||| ||||||    
T  51235697 aataagttgttttcataaaataagctg-tttgaataagctattttttaaaataaggtgtttt 51235757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 790798 - 790736
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    |||||| |||||| ||||||| |||||||||||||||||  |||||| ||||||||||||||||    
T  790798 aataaggtgttttgcataaaataagctgttttgaataagttgttttt-aaaataagttgttttt 790736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 8065970 - 8065908
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    ||||||||||||| ||||||| |||||||||||||||||  | |||| ||||||||||||||||    
T  8065970 aataagttgttttgcataaaataagctgttttgaataagttg-ttttgaaaataagttgttttt 8065908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 32715226 - 32715273
Alignment:
Q  75 aagctgttttgaataagcagttttt-aaaaataagttgtttttaaaat 121  Q
    |||||||||||||||||| ||||||  |||||||||||||||||||||    
T  32715226 aagctgttttgaataagctgtttttctaaaataagttgtttttaaaat 32715273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 8066349 - 8066411
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    ||||||||||||| ||||||| || ||||||||||||||  |||||| |||||||| ||||||    
T  8066349 aataagttgtttttcataaaataaactgttttgaataagttgttttttaaaataaggtgtttt 8066411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 22872303 - 22872364
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    |||||||||||||   |||| |||||||||||||||||| |||||| |||||||| |||||||    
T  22872303 aataagttgttttttgaaaataagctgttttgaataagctgttttt-aaaataaggtgttttt 22872364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 298
Target Start/End: Original strand, 32001440 - 32001506
Alignment:
Q  232 aatgattcagttaattttgatatggttcggttcggttaaccgattcgaattggtttttggttatttt 298  Q
    |||| ||||||||||||| |||| |||| |||||||||| || |||| | | |||||||||||||||    
T  32001440 aatggttcagttaattttaatatagttcagttcggttaagcggttcggaatagtttttggttatttt 32001506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 32714949 - 32715010
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    |||||||||||||   |||| |||||||||||||||||| |||||| |||||||| |||||||    
T  32714949 aataagttgttttttgaaaataagctgttttgaataagctgttttt-aaaataaggtgttttt 32715010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 32715083 - 32715145
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataag-cagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| ||||| |||||||||||  | ||||| |||||||| ||||||    
T  32715083 aataagttgttttcataaaataagctattttgaataagttatttttttaaaataaggtgtttt 32715145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 305
Target Start/End: Complemental strand, 34715066 - 34715020
Alignment:
Q  259 cggttcggttaaccgattcgaattggtttttggttatttttgcccac 305  Q
    |||||||||||| |  |||||||| ||||||||||||||||||||||    
T  34715066 cggttcggttaatcagttcgaattagtttttggttatttttgcccac 34715020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 791047 - 790987
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||| ||||||||||| ||||||  |||||||||| |||||| |||||||| ||||||    
T  791047 aataagtttttttcataaaataagctg-cttgaataagctgttttttaaaataaggtgtttt 790987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 8065851 - 8065790
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| ||| ||||||||||||||  ||||| |||||||| ||||||    
T  8065851 aataaggtattttcataaaataagttgttttgaataagctattttttaaaataaggtgtttt 8065790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 15648126 - 15648089
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataag 91  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  15648126 aataagttgttttcataaaataagatgttttgaataag 15648089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 15648396 - 15648347
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaa 103  Q
    |||||||||||||   |||| |||||||||||||||||| ||||||||||    
T  15648396 aataagttgttttttgaaaataagctgttttgaataagctgtttttaaaa 15648347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 15648832 - 15648893
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| ||| |||||||||||||| |||| | |||||||| ||||||    
T  15648832 aataaggtattttcataaaataagttgttttgaataagctgtttcttaaaataaggtgtttt 15648893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 32130426 - 32130487
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| |||||||||||||||||  |||| | |||||||| ||||||    
T  32130426 aataaggtattttcataaaataagctgttttgaataagttgtttcttaaaataaggtgtttt 32130487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 46240579 - 46240528
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaat 105  Q
    ||||||||||||| ||||||  |||||||||||||||||| ||||||||||||    
T  46240579 aataagttgttttgcataaat-aagctgttttgaataagctgtttttaaaaat 46240528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 51235745 - 51235808
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagttttt--aaaaataagttgttt 114  Q
    |||||| |||||| ||||||| |||||||||||||||||| ||||||   ||||||||||||||    
T  51235745 aataaggtgttttgcataaaataagctgttttgaataagctgtttttcagaaaataagttgttt 51235808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 2e-38; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 155 - 304
Target Start/End: Complemental strand, 29396853 - 29396706
Alignment:
Q  155 gataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttgatat 254  Q
    ||||||||||||||| |||||||| | |||||| |||| ||||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||     
T  29396853 gataattgtggttactaacggttcggttcggtt-gtaa-ttgttatcaaaattatggttcggtttgagaattggttaaatgtttcagttaattttgatac 29396756  T
Q  255 ggttcggttcggttaaccgattcgaattggtttttggttatttttgccca 304  Q
    ||||||||||||||||||| ||| | || |||||||||||||||||||||    
T  29396755 ggttcggttcggttaaccggttcaattttgtttttggttatttttgccca 29396706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 124 - 305
Target Start/End: Complemental strand, 8635456 - 8635275
Alignment:
Q  124 atatggttaatggttcggttcggt-cggttcagataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaag 222  Q
    ||||||||| |||||||||||| | |||||  ||||||||||||||  || ||||| | ||| ||| | || |||||||||||||||||||  ||||||     
T  8635456 atatggtta-tggttcggttcgattcggtttggataattgtggttattaatggttcggttcgattaattaactgttatcaaaataatggttcagttcaaa 8635358  T
Q  223 aattggttaaatgattcagttaattttgatatggttcggttcggttaaccgattcgaattggtttttggttatttttgcccac 305  Q
    |||  || ||||| || ||||||||||||||||||||| || ||||||||| ||||  | |||| ||||||| |||| |||||    
T  8635357 aatctgtgaaatggtttagttaattttgatatggttcgatttggttaaccggttcggttcggttattggttaatttttcccac 8635275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 149 - 263
Target Start/End: Original strand, 29489437 - 29489551
Alignment:
Q  149 ggttcagataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattt 248  Q
    ||||| |||||||| |||||  || ||||||| | ||||||| |||||||||||||||||||||| ||||| |||||| || ||||| |||| |||||||    
T  29489437 ggttcggataattgaggttattaatggttcagtttggttagtgaattgttatcaaaataatggttcggttcgagaattagtgaaatggttcaattaattt 29489536  T
Q  249 tgatatggttcggtt 263  Q
    |||||  ||||||||    
T  29489537 tgatacagttcggtt 29489551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 155 - 273
Target Start/End: Complemental strand, 1800333 - 1800215
Alignment:
Q  155 gataattgtggttaccaacggttcaggtcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttgatat 254  Q
    ||||| ||||||||  || ||||| | ||||||| | || |||||| ||||||||||||  |||||| ||||  | ||||| ||||||||||||||||||    
T  1800333 gataactgtggttattaatggttcggttcggttaattaactgttattaaaataatggttcagttcaaaaattactgaaatggttcagttaattttgatat 1800234  T
Q  255 ggttcggttcggttaaccg 273  Q
    |||||| ||| ||||||||    
T  1800233 ggttcgattcagttaaccg 1800215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 27597029 - 27597090
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    ||||| |||||||||||||| |||||||||||||||||  |||||| |||||||| ||||||    
T  27597029 aataatttgttttcataaaataagctgttttgaataagttgttttttaaaataaggtgtttt 27597090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 33703327 - 33703267
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||| ||||||||||| |||||| |||||||| ||||||    
T  33703327 aataagttgttttcataaaataagctg-tttgaataagctgttttttaaaataaggtgtttt 33703267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 12896768 - 12896714
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataag 108  Q
    |||||| ||||||||||||| |||||||||||||||||  |||||| ||||||||    
T  12896768 aataagatgttttcataaaataagctgttttgaataagttgttttttaaaataag 12896714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 27596888 - 27596828
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||| |||||||||||  ||||| |||||||| ||||||    
T  27596888 aataagttgttttcataaaataagctg-tttgaataagctattttttaaaataaggtgtttt 27596828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 29397774 - 29397832
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||   |||| ||||||||||||||||||  ||||| |||||||||||||||    
T  29397774 aataagttgtttt---aaaataagctgttttgaataagctattttttaaaataagttgtttt 29397832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 29397010 - 29396957
Alignment:
Q  62 gttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||| ||||||| |||||||||||| |  ||||| |||||||||||||||    
T  29397010 gttttcattaaacaagttgttttgaataacctattttttaaaataagttgtttt 29396957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 33703161 - 33703100
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| ||||||||||||||| ||  ||||| |||||||| ||||||    
T  33703161 aataaggtattttcataaaataagctgttttgaatacgctattttttaaaataaggtgtttt 33703100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 7922 - 8012
Alignment:
Q  182 tcggttagtaaattgttatcaaaataatggtttggttcaagaattggttaaatgattcagttaattttgatatggttcggttcggttaacc 272  Q
    ||||||| | || ||||||||||||||| |||  |||||  |||| || ||||| ||||||||||||||||||||||||||||||||||||    
T  7922 tcggttaattaactgttatcaaaataatagttcagttcataaatttgtgaaatggttcagttaattttgatatggttcggttcggttaacc 8012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488 (Bit Score: 38; Significance: 0.000000000003; HSPs: 6)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 6637 - 6576
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| |||||||||||||||||   ||||| |||||||| ||||||    
T  6637 aataagttgttttcataaaataagctgttttgaataagtttttttttaaaataaggtgtttt 6576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 6776 - 6715
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| || ||||||| ||||||  |||||| |||||||| ||||||    
T  6776 aataagttgttttcataaaataaactgtttttaataagttgttttttaaaataaggtgtttt 6715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 7112 - 7173
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||| | ||||||||||| ||||||||||||||||||  ||||| |||||||| ||||||    
T  7112 aataaggtattttcataaaataagctgttttgaataagctattttttaaaataaggtgtttt 7173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 7010 - 7072
Alignment:
Q  54 aataagttgtttt-cataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    |||||| |||||| ||||||| |||||||||||||||||  |||||| ||||||||||||||||    
T  7010 aataaggtgttttgcataaaataagctgttttgaataagttgttttt-aaaataagttgttttt 7072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 6895 - 6834
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgttttt 116  Q
    |||||||||||||   |||| |||||||||||||||||| |||||| |||||||| |||||||    
T  6895 aataagttgttttttgaaaataagctgttttgaataagctgttttt-aaaataaggtgttttt 6834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 6962 - 7022
Alignment:
Q  54 aataagttgttttcataaaacaagctgttttgaataagcagtttttaaaaataagttgtttt 115  Q
    |||||||||||||||||||| ||| || ||||||||||  |||||| |||||||| ||||||    
T  6962 aataagttgttttcataaaataagttg-tttgaataagttgttttttaaaataaggtgtttt 7022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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