View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19475_high_47 (Length: 354)
Name: NF19475_high_47
Description: NF19475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19475_high_47 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 18 - 343
Target Start/End: Complemental strand, 44450124 - 44449786
Alignment:
| Q |
18 |
taaaccgtaaagaagccacgtgtgtattgaaagtttgctatgaatatgaatgcttcttgnnnnnnngtttccataaatagcttctnnnnnnnngtgattt |
117 |
Q |
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| T |
44450124 |
taaaccgtaaagaagccacgtgtgtattgaaaatttgctatgaatatgaatgcttcttgaaaaaaagtttccataaatagcttctaaaaaaaagtgattt |
44450025 |
T |
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| Q |
118 |
tttagagggagaaagaagtggtaaaagatagatgtattttcgaacaaaaatgcccttacataaattttggtgtttcaatcttatatgtgtcttgccctac |
217 |
Q |
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| T |
44450024 |
tttagagggagaaagaagtggtaaaagatagatgtatttttgaacaataatacccttacataaattttggtgtttcaatcttatatgtgtcttgccctac |
44449925 |
T |
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| Q |
218 |
atttgcataagattagtc-------------ttaacacgattacttgctgattgctgaatttgaatccaagatattagataagataaaagagatctttta |
304 |
Q |
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| T |
44449924 |
atttgcataaaactagtcttcatgaagagatttaacacgactacttgctgattgctgaatttgaatccaagacattagataagatgaaagagatctttta |
44449825 |
T |
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| Q |
305 |
tcatctcatccaaattcattagataattaattttatatt |
343 |
Q |
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| T |
44449824 |
tcatctcatccaaattcattagataattaattttatatt |
44449786 |
T |
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