View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19475_high_60 (Length: 293)

Name: NF19475_high_60
Description: NF19475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19475_high_60
NF19475_high_60
[»] chr6 (44 HSPs)
chr6 (1-261)||(31628683-31628944)
chr6 (2-236)||(16107010-16107246)
chr6 (2-236)||(16086511-16086747)
chr6 (2-261)||(18777625-18777885)
chr6 (1-221)||(18399434-18399657)
chr6 (2-261)||(18433136-18433386)
chr6 (1-258)||(18570775-18571035)
chr6 (2-261)||(22441427-22441688)
chr6 (5-261)||(25633226-25633483)
chr6 (61-262)||(25743979-25744181)
chr6 (79-261)||(18583889-18584063)
chr6 (152-262)||(13620326-13620434)
chr6 (152-262)||(19982801-19982909)
chr6 (169-261)||(14128201-14128292)
chr6 (4-205)||(32899288-32899492)
chr6 (152-262)||(35008963-35009072)
chr6 (152-262)||(35014665-35014773)
chr6 (155-261)||(29666481-29666585)
chr6 (152-262)||(16299519-16299628)
chr6 (168-262)||(21623838-21623932)
chr6 (173-262)||(23148635-23148722)
chr6 (152-261)||(18002018-18002127)
chr6 (159-261)||(13014213-13014314)
chr6 (168-260)||(16887308-16887400)
chr6 (152-262)||(16232507-16232614)
chr6 (152-262)||(19610632-19610739)
chr6 (107-262)||(25366732-25366891)
chr6 (1-93)||(35135673-35135765)
chr6 (152-262)||(18838763-18838872)
chr6 (152-262)||(22361252-22361361)
chr6 (180-262)||(22868053-22868135)
chr6 (1-93)||(33325187-33325279)
chr6 (152-262)||(19629926-19630035)
chr6 (169-259)||(27752084-27752175)
chr6 (152-262)||(14625663-14625770)
chr6 (152-262)||(16375925-16376032)
chr6 (152-262)||(16383249-16383356)
chr6 (156-262)||(16814536-16814639)
chr6 (152-262)||(18822900-18823009)
chr6 (204-262)||(25951552-25951609)
chr6 (152-236)||(1556621-1556704)
chr6 (152-236)||(12415388-12415471)
chr6 (169-237)||(14152953-14153021)
chr6 (152-236)||(15741766-15741849)
[»] scaffold0396 (1 HSPs)
scaffold0396 (2-261)||(11199-11460)
[»] scaffold0117 (1 HSPs)
scaffold0117 (1-261)||(11059-11321)
[»] chr8 (41 HSPs)
chr8 (1-261)||(20529343-20529605)
chr8 (4-261)||(41247152-41247411)
chr8 (1-221)||(20561158-20561383)
chr8 (1-221)||(20572720-20572945)
chr8 (5-259)||(19992552-19992807)
chr8 (2-261)||(25122934-25123193)
chr8 (135-258)||(6999816-6999942)
chr8 (1-221)||(20653562-20653785)
chr8 (79-261)||(39115847-39116021)
chr8 (109-261)||(37612269-37612422)
chr8 (79-261)||(22221844-22222028)
chr8 (79-261)||(22228186-22228370)
chr8 (152-262)||(29760589-29760697)
chr8 (152-261)||(275080-275187)
chr8 (152-261)||(640662-640769)
chr8 (152-261)||(826468-826575)
chr8 (169-262)||(16404522-16404614)
chr8 (152-257)||(16193379-16193482)
chr8 (152-261)||(24716372-24716479)
chr8 (152-261)||(43373011-43373118)
chr8 (152-262)||(17285857-17285967)
chr8 (152-257)||(24385276-24385379)
chr8 (3-233)||(21681501-21681734)
chr8 (166-262)||(38534314-38534410)
chr8 (152-262)||(24928336-24928444)
chr8 (152-262)||(18613019-18613128)
chr8 (152-262)||(23837851-23837961)
chr8 (152-225)||(39446290-39446364)
chr8 (156-262)||(21493970-21494075)
chr8 (166-262)||(24105741-24105836)
chr8 (152-262)||(2545570-2545679)
chr8 (156-262)||(13661794-13661898)
chr8 (156-262)||(13720457-13720561)
chr8 (152-262)||(22906758-22906865)
chr8 (166-262)||(16038403-16038498)
chr8 (152-262)||(22148061-22148170)
chr8 (152-262)||(3430792-3430899)
chr8 (152-262)||(24549588-24549695)
chr8 (152-262)||(30121330-30121437)
chr8 (152-260)||(21844110-21844214)
chr8 (152-260)||(21851503-21851607)
[»] scaffold0001 (6 HSPs)
scaffold0001 (2-261)||(61301-61563)
scaffold0001 (57-221)||(79419-79586)
scaffold0001 (152-262)||(164511-164620)
scaffold0001 (74-221)||(70154-70305)
scaffold0001 (199-255)||(172522-172578)
scaffold0001 (199-255)||(178225-178281)
[»] chr1 (39 HSPs)
chr1 (1-258)||(35521838-35522103)
chr1 (1-261)||(22402600-22402862)
chr1 (74-261)||(35055315-35055504)
chr1 (1-261)||(27329254-27329517)
chr1 (1-211)||(21718722-21718936)
chr1 (2-256)||(41212514-41212770)
chr1 (2-261)||(49968145-49968397)
chr1 (152-261)||(44320268-44320376)
chr1 (154-262)||(20887337-20887444)
chr1 (152-262)||(13103770-13103879)
chr1 (152-261)||(21860648-21860755)
chr1 (152-261)||(44034481-44034588)
chr1 (152-254)||(20931956-20932056)
chr1 (152-261)||(20446297-20446404)
chr1 (152-261)||(20532061-20532168)
chr1 (173-261)||(41219061-41219148)
chr1 (152-254)||(20913641-20913741)
chr1 (169-261)||(51627181-51627273)
chr1 (152-261)||(16646562-16646672)
chr1 (166-236)||(16657303-16657373)
chr1 (186-260)||(20346676-20346748)
chr1 (155-262)||(41394844-41394948)
chr1 (152-262)||(17023628-17023737)
chr1 (152-262)||(20254936-20255045)
chr1 (168-236)||(19603774-19603842)
chr1 (152-262)||(22238332-22238439)
chr1 (5-122)||(20346522-20346637)
chr1 (152-262)||(24568278-24568385)
chr1 (2-44)||(35055250-35055292)
chr1 (169-262)||(27675438-27675531)
chr1 (1-41)||(9783778-9783818)
chr1 (152-192)||(37844059-37844099)
chr1 (152-262)||(7640469-7640576)
chr1 (152-237)||(17149181-17149264)
chr1 (152-262)||(22228425-22228532)
chr1 (152-262)||(46523993-46524100)
chr1 (174-259)||(20177823-20177908)
chr1 (193-262)||(41219349-41219418)
chr1 (204-260)||(20954929-20954985)
[»] scaffold0035 (2 HSPs)
scaffold0035 (2-261)||(108955-109215)
scaffold0035 (2-261)||(117456-117716)
[»] chr4 (43 HSPs)
chr4 (2-261)||(20813039-20813300)
chr4 (5-262)||(44347322-44347580)
chr4 (1-261)||(819431-819683)
chr4 (1-261)||(16732666-16732928)
chr4 (2-236)||(30458400-30458624)
chr4 (5-262)||(34395758-34396016)
chr4 (2-262)||(53907201-53907461)
chr4 (2-261)||(8871964-8872225)
chr4 (1-211)||(21959004-21959217)
chr4 (61-261)||(23269425-23269627)
chr4 (1-261)||(45458355-45458608)
chr4 (57-221)||(44056465-44056632)
chr4 (152-262)||(54117777-54117886)
chr4 (152-261)||(5682026-5682134)
chr4 (81-261)||(55376098-55376280)
chr4 (152-262)||(53704243-53704352)
chr4 (152-262)||(25118693-25118801)
chr4 (2-104)||(12836852-12836953)
chr4 (154-252)||(122511-122607)
chr4 (1-122)||(30232126-30232247)
chr4 (152-261)||(18293034-18293141)
chr4 (152-262)||(19021098-19021207)
chr4 (192-261)||(30232012-30232081)
chr4 (1-133)||(18493947-18494079)
chr4 (152-262)||(9795839-9795948)
chr4 (156-262)||(14499726-14499831)
chr4 (174-252)||(13247060-13247136)
chr4 (199-257)||(12836719-12836777)
chr4 (152-262)||(15293888-15293995)
chr4 (152-262)||(18169585-18169692)
chr4 (152-262)||(18248813-18248921)
chr4 (152-262)||(22351598-22351705)
chr4 (169-262)||(18493624-18493717)
chr4 (155-262)||(15286779-15286883)
chr4 (152-238)||(10644827-10644911)
chr4 (152-262)||(27954655-27954762)
chr4 (193-259)||(37956529-37956595)
chr4 (168-262)||(47534566-47534659)
chr4 (208-261)||(13809021-13809074)
chr4 (8-41)||(53704458-53704491)
chr4 (152-220)||(19696939-19697006)
chr4 (152-220)||(19707524-19707591)
chr4 (169-229)||(52265058-52265118)
[»] chr3 (77 HSPs)
chr3 (5-261)||(6146263-6146519)
chr3 (6-261)||(54424510-54424767)
chr3 (5-261)||(6153825-6154081)
chr3 (5-259)||(16181442-16181697)
chr3 (2-261)||(13818005-13818266)
chr3 (2-261)||(19570182-19570443)
chr3 (2-261)||(17101831-17102090)
chr3 (1-261)||(50111561-50111803)
chr3 (1-261)||(14295932-14296195)
chr3 (1-261)||(14301559-14301822)
chr3 (5-262)||(38528224-38528482)
chr3 (5-261)||(13836117-13836364)
chr3 (1-262)||(11060495-11060759)
chr3 (2-221)||(14304541-14304762)
chr3 (152-261)||(34438843-34438951)
chr3 (2-211)||(35124192-35124404)
chr3 (5-261)||(317001-317259)
chr3 (2-215)||(30207713-30207928)
chr3 (2-211)||(53898133-53898345)
chr3 (1-261)||(14527568-14527832)
chr3 (152-262)||(15856772-15856881)
chr3 (152-261)||(28558810-28558917)
chr3 (1-236)||(40939621-40939860)
chr3 (152-260)||(17912010-17912116)
chr3 (152-262)||(19260359-19260467)
chr3 (152-261)||(2844828-2844934)
chr3 (152-257)||(12029707-12029810)
chr3 (152-257)||(45582251-45582354)
chr3 (152-262)||(19232407-19232515)
chr3 (152-261)||(3993188-3993295)
chr3 (152-261)||(33342515-33342622)
chr3 (152-261)||(54684826-54684933)
chr3 (172-261)||(48422220-48422309)
chr3 (152-257)||(51960644-51960748)
chr3 (153-257)||(55513510-55513612)
chr3 (154-261)||(19947336-19947441)
chr3 (152-262)||(11476712-11476821)
chr3 (152-262)||(14285598-14285707)
chr3 (1-259)||(17522379-17522642)
chr3 (176-260)||(12348803-12348886)
chr3 (1-235)||(12559754-12559992)
chr3 (79-261)||(13839444-13839617)
chr3 (2-97)||(17101146-17101239)
chr3 (152-262)||(38168554-38168662)
chr3 (152-261)||(2050431-2050538)
chr3 (152-262)||(16880763-16880873)
chr3 (152-260)||(15879020-15879128)
chr3 (155-261)||(54037629-54037733)
chr3 (1-174)||(55440434-55440611)
chr3 (152-261)||(5240238-5240345)
chr3 (152-262)||(13954432-13954540)
chr3 (5-103)||(16995714-16995810)
chr3 (152-262)||(17205324-17205434)
chr3 (152-262)||(45861418-45861526)
chr3 (168-261)||(12032179-12032272)
chr3 (180-261)||(16995581-16995661)
chr3 (152-262)||(44229600-44229712)
chr3 (152-236)||(23492994-23493077)
chr3 (152-262)||(8268266-8268373)
chr3 (152-262)||(8275366-8275473)
chr3 (152-261)||(3575949-3576058)
chr3 (201-262)||(14058730-14058791)
chr3 (152-236)||(9302684-9302767)
chr3 (152-220)||(14842143-14842210)
chr3 (186-262)||(22143826-22143901)
chr3 (152-236)||(39657174-39657258)
chr3 (155-262)||(12257343-12257447)
chr3 (152-262)||(16821753-16821860)
chr3 (1-44)||(34439051-34439094)
chr3 (152-262)||(16933484-16933593)
chr3 (5-122)||(22143905-22144021)
chr3 (1-41)||(8632283-8632323)
chr3 (193-261)||(9590248-9590316)
chr3 (1-93)||(12487439-12487531)
chr3 (152-262)||(17192194-17192301)
chr3 (1-41)||(17939059-17939099)
chr3 (169-233)||(19306448-19306512)
[»] scaffold0034 (3 HSPs)
scaffold0034 (1-262)||(41153-41418)
scaffold0034 (1-262)||(46660-46925)
scaffold0034 (152-261)||(80492-80599)
[»] chr7 (53 HSPs)
chr7 (1-261)||(11287911-11288175)
chr7 (1-261)||(12369332-12369592)
chr7 (2-261)||(44865723-44865973)
chr7 (2-261)||(47290277-47290537)
chr7 (1-221)||(45451708-45451920)
chr7 (1-221)||(12759483-12759697)
chr7 (1-261)||(16569495-16569759)
chr7 (1-261)||(16595903-16596167)
chr7 (1-258)||(3895517-3895766)
chr7 (79-261)||(7283566-7283739)
chr7 (152-261)||(13862442-13862550)
chr7 (79-261)||(110778-110952)
chr7 (1-261)||(12247609-12247872)
chr7 (152-261)||(144272-144379)
chr7 (152-261)||(2029555-2029663)
chr7 (152-261)||(1936530-1936637)
chr7 (2-236)||(26069135-26069359)
chr7 (2-236)||(26069793-26070017)
chr7 (2-236)||(26093580-26093804)
chr7 (2-261)||(35095309-35095563)
chr7 (152-262)||(127053-127161)
chr7 (152-257)||(32493559-32493662)
chr7 (155-254)||(16212390-16212487)
chr7 (152-251)||(25124766-25124863)
chr7 (2-68)||(15822119-15822185)
chr7 (152-262)||(11580275-11580382)
chr7 (168-262)||(16920203-16920297)
chr7 (152-257)||(36053275-36053378)
chr7 (152-262)||(47480557-47480666)
chr7 (152-262)||(13321638-13321745)
chr7 (187-261)||(39046162-39046234)
chr7 (168-262)||(13390023-13390117)
chr7 (152-262)||(15928185-15928292)
chr7 (152-262)||(16419112-16419220)
chr7 (152-261)||(17816969-17817076)
chr7 (152-261)||(19049925-19050032)
chr7 (152-260)||(18253379-18253487)
chr7 (152-262)||(13910560-13910667)
chr7 (152-262)||(48622209-48622317)
chr7 (152-262)||(3050222-3050328)
chr7 (199-262)||(13036609-13036672)
chr7 (169-256)||(13378171-13378258)
chr7 (1-122)||(49047307-49047429)
chr7 (152-262)||(7823325-7823432)
chr7 (152-262)||(7830636-7830743)
chr7 (152-262)||(12899910-12900017)
chr7 (180-262)||(13759002-13759082)
chr7 (152-262)||(27101166-27101273)
chr7 (152-262)||(27177030-27177137)
chr7 (169-261)||(3060586-3060675)
chr7 (166-262)||(9081270-9081366)
chr7 (199-252)||(14419735-14419787)
chr7 (152-236)||(15759671-15759754)
[»] chr2 (49 HSPs)
chr2 (4-261)||(17367316-17367575)
chr2 (1-261)||(25602520-25602786)
chr2 (1-212)||(27262299-27262513)
chr2 (1-255)||(36890181-36890437)
chr2 (61-261)||(25875427-25875618)
chr2 (79-261)||(23836202-23836387)
chr2 (2-262)||(42535103-42535364)
chr2 (1-212)||(4447674-4447886)
chr2 (1-262)||(28974542-28974807)
chr2 (85-262)||(8891766-8891934)
chr2 (81-261)||(32466423-32466606)
chr2 (152-259)||(19794241-19794347)
chr2 (152-262)||(22863545-22863653)
chr2 (152-254)||(463338-463438)
chr2 (152-262)||(43642489-43642597)
chr2 (152-238)||(9652434-9652518)
chr2 (152-262)||(20626859-20626967)
chr2 (152-254)||(24086949-24087052)
chr2 (152-262)||(16936193-16936302)
chr2 (152-262)||(17006853-17006962)
chr2 (152-257)||(23805845-23805948)
chr2 (152-262)||(25213679-25213787)
chr2 (2-111)||(271662-271770)
chr2 (152-261)||(23821294-23821403)
chr2 (152-261)||(23830373-23830482)
chr2 (152-262)||(2155315-2155425)
chr2 (152-262)||(19688944-19689051)
chr2 (152-262)||(22256493-22256601)
chr2 (152-262)||(22284601-22284710)
chr2 (1-122)||(24570924-24571045)
chr2 (199-261)||(25264952-25265014)
chr2 (152-262)||(28030751-28030860)
chr2 (152-220)||(22275368-22275435)
chr2 (1-190)||(22579422-22579615)
chr2 (152-262)||(23777578-23777687)
chr2 (168-262)||(2732-2826)
chr2 (152-262)||(5888173-5888281)
chr2 (152-262)||(7507373-7507481)
chr2 (152-233)||(22762808-22762888)
chr2 (173-261)||(36981990-36982075)
chr2 (180-260)||(24294011-24294091)
chr2 (174-262)||(25306078-25306166)
chr2 (152-219)||(15633847-15633913)
chr2 (152-251)||(17396206-17396303)
chr2 (169-236)||(19668650-19668717)
chr2 (152-262)||(28775338-28775445)
chr2 (152-262)||(33128686-33128793)
chr2 (152-262)||(42177501-42177608)
chr2 (1-93)||(31145839-31145932)
[»] scaffold0183 (2 HSPs)
scaffold0183 (2-261)||(5182-5431)
scaffold0183 (152-262)||(7212-7319)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-261)||(24217-24479)
[»] scaffold0008 (3 HSPs)
scaffold0008 (2-261)||(23185-23446)
scaffold0008 (157-261)||(35564-35667)
scaffold0008 (152-254)||(127722-127822)
[»] scaffold0740 (1 HSPs)
scaffold0740 (5-259)||(4780-5035)
[»] chr5 (39 HSPs)
chr5 (1-261)||(21397585-21397846)
chr5 (1-261)||(11336674-11336937)
chr5 (1-261)||(20712569-20712831)
chr5 (5-262)||(21646243-21646490)
chr5 (4-221)||(24182665-24182884)
chr5 (152-262)||(27182084-27182193)
chr5 (79-261)||(11584621-11584795)
chr5 (1-72)||(21907192-21907263)
chr5 (152-262)||(28262097-28262206)
chr5 (152-262)||(21651328-21651436)
chr5 (152-257)||(21205553-21205657)
chr5 (156-261)||(23981020-23981124)
chr5 (169-261)||(4865896-4865987)
chr5 (154-257)||(25944171-25944272)
chr5 (186-261)||(1167725-1167799)
chr5 (152-262)||(17910128-17910237)
chr5 (152-262)||(18777523-18777632)
chr5 (1-261)||(19406033-19406296)
chr5 (75-211)||(21907286-21907426)
chr5 (166-236)||(28902856-28902926)
chr5 (166-236)||(28939251-28939321)
chr5 (1-122)||(22662311-22662434)
chr5 (5-122)||(1167838-1167954)
chr5 (152-262)||(16106279-16106388)
chr5 (152-262)||(21222123-21222233)
chr5 (81-261)||(23467008-23467192)
chr5 (152-262)||(23542911-23543018)
chr5 (152-260)||(32965228-32965337)
chr5 (152-235)||(7529537-7529619)
chr5 (152-254)||(7729070-7729173)
chr5 (152-262)||(19500489-19500596)
chr5 (152-262)||(43442934-43443041)
chr5 (169-262)||(433099-433192)
chr5 (152-236)||(3674513-3674597)
chr5 (1-104)||(4865753-4865855)
chr5 (152-262)||(17471120-17471227)
chr5 (152-262)||(22366016-22366123)
chr5 (152-237)||(22882639-22882722)
chr5 (155-220)||(34939903-34939967)
[»] scaffold0021 (5 HSPs)
scaffold0021 (80-261)||(131742-131926)
scaffold0021 (1-261)||(25925-26189)
scaffold0021 (3-261)||(12549-12811)
scaffold0021 (1-261)||(16394-16658)
scaffold0021 (152-262)||(167845-167952)
[»] scaffold0359 (2 HSPs)
scaffold0359 (2-236)||(11173-11407)
scaffold0359 (1-261)||(1809-2060)
[»] scaffold0338 (1 HSPs)
scaffold0338 (1-261)||(9481-9744)
[»] scaffold0103 (1 HSPs)
scaffold0103 (1-261)||(34158-34412)
[»] scaffold0673 (2 HSPs)
scaffold0673 (2-261)||(6339-6600)
scaffold0673 (152-261)||(327-435)
[»] scaffold0190 (1 HSPs)
scaffold0190 (1-261)||(10431-10694)
[»] scaffold0014 (2 HSPs)
scaffold0014 (1-261)||(85826-86090)
scaffold0014 (1-262)||(159795-160058)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-261)||(112035-112299)
[»] scaffold0816 (1 HSPs)
scaffold0816 (2-261)||(2557-2818)
[»] scaffold0016 (3 HSPs)
scaffold0016 (2-261)||(164708-164966)
scaffold0016 (152-257)||(165778-165881)
scaffold0016 (152-260)||(116045-116153)
[»] scaffold1867 (1 HSPs)
scaffold1867 (2-261)||(638-898)
[»] scaffold0031 (2 HSPs)
scaffold0031 (2-212)||(71109-71322)
scaffold0031 (1-262)||(31540-31805)
[»] scaffold0083 (1 HSPs)
scaffold0083 (5-262)||(15360-15616)
[»] scaffold0447 (3 HSPs)
scaffold0447 (1-262)||(5054-5314)
scaffold0447 (1-262)||(9668-9928)
scaffold0447 (152-262)||(144-253)
[»] scaffold0383 (2 HSPs)
scaffold0383 (1-262)||(7663-7923)
scaffold0383 (152-262)||(3008-3117)
[»] scaffold0480 (3 HSPs)
scaffold0480 (5-261)||(4750-4998)
scaffold0480 (169-262)||(8398-8491)
scaffold0480 (1-149)||(8486-8635)
[»] scaffold0044 (1 HSPs)
scaffold0044 (5-261)||(38796-39057)
[»] scaffold0120 (4 HSPs)
scaffold0120 (1-236)||(31704-31940)
scaffold0120 (1-236)||(47066-47302)
scaffold0120 (1-261)||(22005-22255)
scaffold0120 (169-256)||(27516-27603)
[»] scaffold0218 (1 HSPs)
scaffold0218 (152-262)||(4693-4802)
[»] scaffold0011 (3 HSPs)
scaffold0011 (152-262)||(254369-254478)
scaffold0011 (152-262)||(260975-261084)
scaffold0011 (152-261)||(122701-122809)
[»] scaffold0077 (3 HSPs)
scaffold0077 (152-261)||(14974-15082)
scaffold0077 (152-262)||(36454-36562)
scaffold0077 (152-262)||(2609-2716)
[»] scaffold0068 (4 HSPs)
scaffold0068 (152-262)||(48771-48880)
scaffold0068 (152-262)||(62219-62328)
scaffold0068 (5-122)||(48640-48756)
scaffold0068 (5-122)||(62088-62204)
[»] scaffold0184 (1 HSPs)
scaffold0184 (151-261)||(30789-30897)
[»] scaffold0122 (1 HSPs)
scaffold0122 (152-259)||(19461-19567)
[»] scaffold0078 (2 HSPs)
scaffold0078 (151-261)||(41947-42055)
scaffold0078 (152-262)||(36612-36718)
[»] scaffold0310 (1 HSPs)
scaffold0310 (152-262)||(5910-6019)
[»] scaffold0116 (2 HSPs)
scaffold0116 (156-262)||(30736-30841)
scaffold0116 (152-262)||(654-761)
[»] scaffold0049 (1 HSPs)
scaffold0049 (152-262)||(20807-20916)
[»] scaffold1539 (1 HSPs)
scaffold1539 (79-262)||(111-289)
[»] scaffold0498 (1 HSPs)
scaffold0498 (152-262)||(9497-9605)
[»] scaffold0175 (3 HSPs)
scaffold0175 (152-261)||(5342-5449)
scaffold0175 (152-236)||(15508-15590)
scaffold0175 (153-262)||(494-602)
[»] scaffold0162 (2 HSPs)
scaffold0162 (152-262)||(25952-26061)
scaffold0162 (152-257)||(7708-7811)
[»] scaffold0004 (1 HSPs)
scaffold0004 (152-261)||(193008-193115)
[»] scaffold0876 (1 HSPs)
scaffold0876 (155-262)||(414-519)
[»] scaffold0417 (1 HSPs)
scaffold0417 (152-262)||(15527-15635)
[»] scaffold0132 (2 HSPs)
scaffold0132 (156-262)||(14136-14240)
scaffold0132 (152-262)||(42988-43096)
[»] scaffold0266 (2 HSPs)
scaffold0266 (152-257)||(3124-3227)
scaffold0266 (152-257)||(1734-1837)
[»] scaffold0240 (2 HSPs)
scaffold0240 (2-103)||(8065-8165)
scaffold0240 (191-261)||(8207-8277)
[»] scaffold0234 (1 HSPs)
scaffold0234 (152-262)||(16917-17025)
[»] scaffold0012 (1 HSPs)
scaffold0012 (152-262)||(246980-247087)
[»] scaffold0554 (1 HSPs)
scaffold0554 (1-261)||(2409-2673)
[»] scaffold0173 (1 HSPs)
scaffold0173 (152-262)||(5846-5955)
[»] scaffold0106 (1 HSPs)
scaffold0106 (152-261)||(49043-49150)
[»] scaffold0039 (1 HSPs)
scaffold0039 (152-257)||(12031-12134)
[»] scaffold0686 (1 HSPs)
scaffold0686 (153-257)||(5391-5493)
[»] scaffold0342 (1 HSPs)
scaffold0342 (1-255)||(12762-13021)
[»] scaffold0158 (1 HSPs)
scaffold0158 (153-257)||(25841-25943)
[»] scaffold0118 (1 HSPs)
scaffold0118 (155-260)||(33968-34072)
[»] scaffold0302 (1 HSPs)
scaffold0302 (153-252)||(12733-12830)
[»] scaffold0025 (2 HSPs)
scaffold0025 (156-255)||(149246-149343)
scaffold0025 (168-262)||(53973-54068)
[»] scaffold0597 (1 HSPs)
scaffold0597 (155-261)||(492-596)
[»] scaffold0335 (2 HSPs)
scaffold0335 (152-254)||(6634-6734)
scaffold0335 (156-261)||(5093-5197)
[»] scaffold0032 (4 HSPs)
scaffold0032 (155-261)||(56217-56320)
scaffold0032 (152-260)||(93339-93448)
scaffold0032 (152-262)||(12884-12993)
scaffold0032 (153-262)||(107689-107797)
[»] scaffold0682 (1 HSPs)
scaffold0682 (152-262)||(8075-8184)
[»] scaffold0537 (1 HSPs)
scaffold0537 (199-261)||(589-651)
[»] scaffold0465 (1 HSPs)
scaffold0465 (152-257)||(9553-9656)
[»] scaffold0416 (1 HSPs)
scaffold0416 (152-257)||(6269-6372)
[»] scaffold0387 (1 HSPs)
scaffold0387 (152-262)||(6713-6822)
[»] scaffold0260 (2 HSPs)
scaffold0260 (186-260)||(8999-9071)
scaffold0260 (5-122)||(8845-8960)
[»] scaffold0207 (1 HSPs)
scaffold0207 (152-262)||(11312-11421)
[»] scaffold0125 (1 HSPs)
scaffold0125 (152-262)||(43556-43665)
[»] scaffold0095 (1 HSPs)
scaffold0095 (152-225)||(33252-33326)
[»] scaffold0643 (1 HSPs)
scaffold0643 (169-262)||(152-245)
[»] scaffold0327 (1 HSPs)
scaffold0327 (108-220)||(6272-6387)
[»] scaffold0018 (1 HSPs)
scaffold0018 (173-261)||(50724-50810)
[»] scaffold1164 (1 HSPs)
scaffold1164 (152-210)||(2014-2071)
[»] scaffold0706 (1 HSPs)
scaffold0706 (152-257)||(6056-6159)
[»] scaffold0138 (1 HSPs)
scaffold0138 (103-220)||(21957-22077)
[»] scaffold0029 (1 HSPs)
scaffold0029 (152-262)||(49369-49478)
[»] scaffold0003 (1 HSPs)
scaffold0003 (152-262)||(7824-7932)
[»] scaffold0610 (2 HSPs)
scaffold0610 (155-236)||(106-187)
scaffold0610 (158-261)||(9598-9700)
[»] scaffold0215 (2 HSPs)
scaffold0215 (152-261)||(8888-8994)
scaffold0215 (152-261)||(15786-15892)
[»] scaffold1295 (1 HSPs)
scaffold1295 (108-260)||(707-863)
[»] scaffold0529 (1 HSPs)
scaffold0529 (152-262)||(3577-3686)
[»] scaffold0473 (1 HSPs)
scaffold0473 (152-262)||(9604-9711)
[»] scaffold0413 (1 HSPs)
scaffold0413 (152-236)||(5653-5734)
[»] scaffold0066 (1 HSPs)
scaffold0066 (152-262)||(45648-45757)
[»] scaffold0028 (1 HSPs)
scaffold0028 (152-257)||(107329-107432)
[»] scaffold0892 (1 HSPs)
scaffold0892 (166-262)||(4037-4132)
[»] scaffold0615 (1 HSPs)
scaffold0615 (152-236)||(5752-5835)
[»] scaffold0213 (1 HSPs)
scaffold0213 (152-262)||(29806-29913)
[»] scaffold0076 (1 HSPs)
scaffold0076 (152-262)||(43605-43712)
[»] scaffold1500 (1 HSPs)
scaffold1500 (152-262)||(1046-1153)
[»] scaffold0376 (1 HSPs)
scaffold0376 (152-262)||(65-172)
[»] scaffold0243 (1 HSPs)
scaffold0243 (194-232)||(1883-1921)
[»] scaffold0191 (1 HSPs)
scaffold0191 (152-262)||(6989-7096)
[»] scaffold0084 (1 HSPs)
scaffold0084 (180-230)||(55684-55733)
[»] scaffold0080 (1 HSPs)
scaffold0080 (193-262)||(43356-43426)
[»] scaffold0075 (1 HSPs)
scaffold0075 (152-262)||(33989-34098)
[»] scaffold1272 (1 HSPs)
scaffold1272 (168-261)||(948-1041)
[»] scaffold0574 (1 HSPs)
scaffold0574 (155-236)||(9051-9131)
[»] scaffold0017 (2 HSPs)
scaffold0017 (152-261)||(44176-44284)
scaffold0017 (152-261)||(54479-54587)
[»] scaffold0507 (1 HSPs)
scaffold0507 (152-220)||(1068-1136)
[»] scaffold0058 (1 HSPs)
scaffold0058 (169-225)||(69860-69916)
[»] scaffold0026 (1 HSPs)
scaffold0026 (168-236)||(108372-108439)
[»] scaffold0023 (1 HSPs)
scaffold0023 (152-220)||(153579-153646)


Alignment Details
Target: chr6 (Bit Score: 162; Significance: 2e-86; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 31628683 - 31628944
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||| |||||||||||||||||||| |    
T  31628683 aaatgaaagtgtgagaaaatttctcataagagtatatttttatatcaagtccccttaatgggcctaaccctc-aacttaatggacttaacccatttctat 31628781  T
Q  101 tcaattcaaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    |||  |||||||||||||||||  | || |||||||||||||||||||| |   ||||||||||||||||||||||||||||||||| ||||||||||||    
T  31628782 tcacatcaaaatgtttctacacgtacaacggtatttcactaataacggtcaaataacggtaaaatgtcaccaacggtcactaaacggtaaaatcttaatt 31628881  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
     ||| ||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  31628882 -ttattctagtaacttagtaaaacaacggttctcactaatcactaaaagtaattctcaccaaaa 31628944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 16107010 - 16107246
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||    
T  16107010 aatgaaagtgtgaggaaatttctcataagagtaggtttttatatcaagtccctttaatgggcctaactctcaaacttaatggacttaacccatttctatt 16107109  T
Q  102 caattcaaaatgtttctacacccagaatggtatttcactaataacggtta--aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatta- 198  Q
    ||| ||||||||||||||| |||| || |||||||||||||||| ||| |  ||||||||||| ||||||||||||||||||||| |||||| || |||     
T  16107110 caaatcaaaatgtttctac-cccacaacggtatttcactaataatggtcaataacggtaaaatatcaccaacggtcactaaacggtaaaatcctagttat 16107208  T
Q  199 ttactctagtaacttagtaaaacaacgattctcactaa 236  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  16107209 ttactctagtaacttagtaaaaccacgattctcactaa 16107246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 16086511 - 16086747
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||    
T  16086511 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaatgggcctaactctcaaacttaatggacttaacccatttctatt 16086610  T
Q  102 caattcaaaatgtttctacacccagaatggtatttcactaataacggtta--aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatta- 198  Q
    ||| ||||||||||||||| |||| || |||||||||||||||| ||| |  ||||||||||| ||| ||||||||||||||| | |||||| || |||     
T  16086611 caaatcaaaatgtttctac-cccacaacggtatttcactaataatggtcaataacggtaaaatatcatcaacggtcactaaacagtaaaatcctagttat 16086709  T
Q  199 ttactctagtaacttagtaaaacaacgattctcactaa 236  Q
    ||||||||||||||||||||| | ||| ||||||||||    
T  16086710 ttactctagtaacttagtaaatccacggttctcactaa 16086747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 18777625 - 18777885
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    ||||||||||||||||||||||||||||||||| ||| |||||  | ||| |   | | |||||||| ||||| || |||||||||||||||||||| ||    
T  18777625 aatgaaagtgtgaggaaatttctcataagagtaggttattatagtaggtctcacaattgggcctaaccctcaa-cttaatggacttaacccatttctatt 18777723  T
Q  102 caattcaaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatta 198  Q
    ||  |||||||||||||||||  | || ||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||| ||||||||||||     
T  18777724 cacatcaaaatgtttctacacatacaacggtatttcactaataacagttatttaacggtaaaatgtcaccaacggtcactaaacggtaaaatcttaatt- 18777822  T
Q  199 ttactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||||||| ||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  18777823 ttactctagtatcttagtaaaacaacggttctcactaatcactaaaagtaattctcaccaaaa 18777885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 18399434 - 18399657
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||| ||| |||| ||| |||||||||||||||| |    
T  18399434 aaatgaaagtgtgaggaaatttctcataagactaggtttttatatcaagtccccttaatgggcctaaccctc-aacttaatagacttaacccatttctat 18399532  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggt---taaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    |||| || |||||||||||| || || || ||||||||||||||||||||   | ||||||||||| ||||||| ||||||||||||| |||||  ||||    
T  18399533 tcaaatcaaaaatgtttctatacacacaacggtatttcactaataacggtcaattaacggtaaaatatcaccaatggtcactaaacggtaaaatactaat 18399632  T
Q  197 tattactctagtaacttagtaaaac 221  Q
    ||||||||||||||||  |||||||    
T  18399633 tattactctagtaactcggtaaaac 18399657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 18433136 - 18433386
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| |||||| ||||||| || ||||| ||| | || |||||||||||| ||||||| ||    
T  18433136 aatgaaagtgtgaggaaatttctcataagtgtaggtttttataccaagtctccttaatgggtctaaccctcca-cttaatggacttaactcatttctatt 18433234  T
Q  102 caattca-aaatgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatt 200  Q
    ||  ||  |||||||||||||| |  |  |||| |||||||||||||||        ||||| |||| |||||||||||||||| |||||||||||| ||    
T  18433235 cacatctcaaatgtttctacactctaaccggtaattcactaataacggt--------aaaatatcacaaacggtcactaaacggtaaaatcttaatt-tt 18433325  T
Q  201 actctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||||||||||||||||| ||||||||||| |  ||||||||| |||||||||||    
T  18433326 actctagtaacttagtaaaacaactattctcactaaccactaaaagtaactctcaccaaaa 18433386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 18570775 - 18571035
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  | |||||| ||  | || |||||||| ||||||| ||||||||| |||||||||||||||||||| |    
T  18570775 aaatgaaagtgtgaggaaatttcctctaagacaaggtttttgtagtatgttcccttaatgggcctaattctcaaacttaatggacttaacccatttctat 18570874  T
Q  101 tca-attcaaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    ||| ||   |||||||||||||| |  |  |||| ||||||||||||||| |   |||||||||||||||| |||||||||||||||| ||||||||| |    
T  18570875 tcacatctcaaatgtttctacactctaacaggtaattcactaataacggtcaagtaacggtaaaatgtcactaacggtcactaaacggtaaaatcttagt 18570974  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcacca 258  Q
    | ||||||| | |||||||||||| ||| |||||||||||||  ||||||||||||||||||    
T  18570975 t-ttactcttgcaacttagtaaaataactattctcactaatcactaaaagtaattctcacca 18571035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 22441427 - 22441688
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    ||| |   | | | |||||| ||||| || |||||||||||||||||||| ||    
T  22441427 aatgaaagtgtgaggaaatttctcctaagagtatgtttatatagtgtgtctcacaattggacctaaccctcaa-cttaatggacttaacccatttctatt 22441525  T
Q  102 caattcaaaa-tgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    |||  ||||| ||||||||||| |  |   ||| ||||||||||||||| ||   ||||||||||||||| |||||||| ||||||| ||||||||||||    
T  22441526 caaaccaaaaatgtttctacactctaacctgtaattcactaataacggtcaagtaacggtaaaatgtcactaacggtcattaaacggtaaaatcttaatt 22441625  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
     | ||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| ||||    
T  22441626 ct-actctagtaacttagtaaaacaacggttctcactaatcactaaaagtaattctcacaaaaa 22441688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 5 - 261
Target Start/End: Complemental strand, 25633483 - 25633226
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttcaa 104  Q
    ||||||||||||||||| |||||||||||| |||||||||  ||| | || || | |||||||| ||| | || || ||||||||| ||||||| ||||     
T  25633483 gaaagtgtgaggaaatt-ctcataagagtaggtttttatactaagcctccatattgggcctaaccctcca-cttaacggacttaactcatttctattcac 25633386  T
Q  105 ttca-aaatgtttctacacccagaatggtatttcactaataacggttaaa---cggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatt 200  Q
     ||  |||||||||||||| |  |  |||| ||||||||||||||| |||   |||||||||||||| || ||||||||||| | |||||||||||| ||    
T  25633385 atcttaaatgtttctacactctaaccggtaattcactaataacggtcaaataacggtaaaatgtcactaatggtcactaaacagtaaaatcttaatt-tt 25633287  T
Q  201 actctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||||||||||||||||||||| ||| ||||||||  |||||||||||||||||||||    
T  25633286 actctagtaacttagtaaaacaacggttcccactaatcactaaaagtaattctcaccaaaa 25633226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 262
Target Start/End: Complemental strand, 25744181 - 25743979
Alignment:
Q  61 ggcctaactctcaaactcaatggacttaacccatttcttttcaattcaaaatgtttctacacccagaatggtatttcactaataacggtta---aacggt 157  Q
    |||||||| ||||| || ||||||| ||| |||||||| ||||  |||||||||||||||||  | || ||||||||||||||||||||||   | ||||    
T  25744181 ggcctaaccctcaa-cttaatggacgtaatccatttctattcacatcaaaatgtttctacacaaacaacggtatttcactaataacggttaattatcggt 25744083  T
Q  158 aaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcacc 257  Q
    | |||||||| |||||||||||||| | ||| ||||| || ||||||||||||||| |||||| |||  ||||||||||||  |||||||||||| ||||    
T  25744082 ataatgtcactaacggtcactaaacagtaaagtcttagtt-ttactctagtaacttcgtaaaataactcttctcactaatcactaaaagtaattcccacc 25743984  T
Q  258 aaaat 262  Q
    |||||    
T  25743983 aaaat 25743979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 79 - 261
Target Start/End: Original strand, 18583889 - 18584063
Alignment:
Q  79 aatggacttaacccattt-cttttcaattcaaaatgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcac 177  Q
    |||||| ||||||||||| || |||||  |||||||||||||||| || || |||| |||||||||||||||        ||||||||||||| ||||||    
T  18583889 aatggaattaacccattttctattcaaaccaaaatgtttctacactcaaaaaggtaattcactaataacggt--------aaaatgtcaccaatggtcac 18583980  T
Q  178 taaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||| || ||||||| || ||| |||||||||||||||||||| ||| |||||||||||||  |||||||||||| ||||||||    
T  18583981 taaatggtaaaatctcaactat-actctagtaacttagtaaaataactattctcactaatcactaaaagtaattcccaccaaaa 18584063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 13620434 - 13620326
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||  ||||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  13620434 aacggtaaaatgtcaccaacagtcactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaatt 13620337  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  13620336 cccaccaaaat 13620326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 19982909 - 19982801
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||||  ||||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  19982909 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaatt 19982812  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  19982811 cccaccaaaat 19982801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 169 - 261
Target Start/End: Complemental strand, 14128292 - 14128201
Alignment:
Q  169 aacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||| |  ||||||| ||||||| |||||    
T  14128292 aacggtcactaaacggtaaaatcttaatt-ttactctagtaacttagtaaaacaactattctcactaaccactaaaagtcattctcaacaaaa 14128201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 205
Target Start/End: Original strand, 32899288 - 32899492
Alignment:
Q  4 tgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttca 103  Q
    |||||||||||||||||||||||||| | |  |||| ||||    ||| |   ||||||| |||| ||||| || ||| |||||||||||||||| ||||    
T  32899288 tgaaagtgtgaggaaatttctcataatactgggtttatatagtgtgtctcacaaataggcataaccctcaa-cttaatagacttaacccatttctattca 32899386  T
Q  104 attca-aaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattat 199  Q
    | ||| ||||||||| |||| || || |||||||||||||||||||| ||   |||||||||  ||||||||||||||||||||  ||||| | ||||||    
T  32899387 aatcacaaatgtttccacacacacaacggtatttcactaataacggtcaattaacggtaaaacatcaccaacggtcactaaacgctaaaatatcaattat 32899486  T
Q  200 tactct 205  Q
    ||||||    
T  32899487 tactct 32899492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 35009072 - 35008963
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| ||||||| |||||||| ||||||| || | ||||||||||| |||||||||| ||| |||||||||||||   ||||||||||    
T  35009072 aacggtaaaatgtcactaacggtctctaaacggtaaaatctcaact-ttactctagtagcttagtaaaataactattctcactaatcacaaaaagtaatt 35008974  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  35008973 cccaccaaaat 35008963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 35014773 - 35014665
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||  ||||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  35014773 aacggtaaaatgtcactaacggtcaataaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaatt 35014676  T
Q  252 ctcaccaaaat 262  Q
    | ||| |||||    
T  35014675 cccactaaaat 35014665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 29666481 - 29666585
Alignment:
Q  155 ggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctc 254  Q
    |||||||| |||| |||| ||||||||||| ||||||| ||||  ||||||||||||||| | ||| ||| |||||||||||||  |||||||||||| |    
T  29666481 ggtaaaatatcactaacgatcactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaattccc 29666578  T
Q  255 accaaaa 261  Q
    |||||||    
T  29666579 accaaaa 29666585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 16299628 - 16299519
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||||||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||| |  ||||| |||||    
T  16299628 aacggtaaaatataaccaacggtcactaaacggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaaccattaaaaataatt 16299530  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  16299529 ctcaccaaaat 16299519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 262
Target Start/End: Original strand, 21623838 - 21623932
Alignment:
Q  168 caacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    ||||||||||| ||||| |||||  |||||| ||| |||||||| |||||||| || |||||||||||| || ||||| ||||||||||||||||    
T  21623838 caacggtcacttaacggtaaaatactaattactaccctagtaacgtagtaaaataatgattctcactaaacgctaaaaataattctcaccaaaat 21623932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 23148635 - 23148722
Alignment:
Q  173 gtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    |||||||||||| ||||||  ||||  ||||||||||||||||||||| ||| |||||||||||||  |||||||||||| |||||||||    
T  23148635 gtcactaaacggtaaaatcccaatt--tactctagtaacttagtaaaataactattctcactaatcactaaaagtaattcccaccaaaat 23148722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 18002127 - 18002018
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||| | |   ||||||||||||||||| || | ||||||||||    ||||| |||||    
T  18002127 aacggtaaaatgtaaccaacggtcactaaacggtaaaatctcaatcactgtactagtaacttagtaaaataagggttctcactaaatattaaaaataatt 18002028  T
Q  252 ctcaccaaaa 261  Q
    ||||||||||    
T  18002027 ctcaccaaaa 18002018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 13014314 - 13014213
Alignment:
Q  159 aaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcacca 258  Q
    ||||||||| ||||||||||||| || ||||||||| || |||| ||||||||||||||||| ||| ||||||||||| |  ||| ||||| |||| |||    
T  13014314 aaatgtcactaacggtcactaaatggtaaaatcttagtt-ttaccctagtaacttagtaaaataactattctcactaaccactaagagtaactctcgcca 13014216  T
Q  259 aaa 261  Q
    |||    
T  13014215 aaa 13014213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 260
Target Start/End: Complemental strand, 16887400 - 16887308
Alignment:
Q  168 caacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaa 260  Q
    ||||||||||| ||||| |||||  |||||| |||||||| |||||||||||| || | |||||||||| |  ||||| ||||||||||||||    
T  16887400 caacggtcacttaacggtaaaatactaattactactctagcaacttagtaaaataatggttctcactaaacactaaaaataattctcaccaaa 16887308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 16232507 - 16232614
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  16232507 aacggtaaaatgtaaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 16232603  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  16232604 ctcaccaaaat 16232614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 19610632 - 19610739
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  19610632 aacggtaaaatgtaaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 19610728  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  19610729 ctcaccaaaat 19610739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 25366891 - 25366732
Alignment:
Q  107 caaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattact 203  Q
    |||||||||||||||| || || ||||  | |||||||||||| |   ||||||||||| ||| || |||||||  ||||| |||||  ||||||||||     
T  25366891 caaaatgtttctacacacacaacggtaaattactaataacggtcacttaacggtaaaatatcaacatcggtcacataacggtaaaatactaattattacc 25366792  T
Q  204 ctagtaacttagt-aaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    | ||||||||||| |||| || | |||||||||| |  ||||| |||| |||||||||||    
T  25366791 ccagtaacttagtaaaaataatggttctcactaaacactaaaaataatcctcaccaaaat 25366732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 35135765 - 35135673
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaaccca 93  Q
    |||||||||||||| ||||||||  ||||||  |||||| ||||  | ||||||||||| |||||||| || ||||| | |||||||||||||    
T  35135765 aaatgaaagtgtgacgaaatttcctataagacaatgtttatataggatgtccccttaatgggcctaaccctaaaacttagtggacttaaccca 35135673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 18838872 - 18838763
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||  | ||||||||||||||||||| |||| | |||| | ||| ||||||||||||||||| || | ||||||||||    |||||  ||||    
T  18838872 aacggtaaaacataaccaacggtcactaaacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaaatattaaaaaaaatt 18838774  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  18838773 ctcaccaaaat 18838763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 22361361 - 22361252
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||   | ||||||||||| ||||| ||||| ||||||| ||| ||||||||| ||| ||| || | |||||||||| |  ||||| |||||    
T  22361361 aacggtaaaatactaacaacggtcacttaacggtaaaatattaattactaccctagtaactgagtcaaataatggttctcactaaacactaaaa-taatt 22361263  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  22361262 ctcaccaaaat 22361252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 22868053 - 22868135
Alignment:
Q  180 aacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    ||||| ||| |||| ||||||||||||||||||||| |||| |||| ||| ||||||    ||||| ||||||||||||||||    
T  22868053 aacggtaaactcttgattattactctagtaacttagcaaaataacggttcccactaaatactaaaaataattctcaccaaaat 22868135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 33325187 - 33325279
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaaccca 93  Q
    |||||||||||||| |||||| |  ||||||  |||||| ||||  | ||||||||||| |||||||| || ||||| | |||||||||||||    
T  33325187 aaatgaaagtgtgacgaaattacctataagacaatgtttatatagtatgtccccttaatgggcctaaccctaaaacttagtggacttaaccca 33325279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 19629926 - 19630035
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcga-taaaagtaat 250  Q
    ||||||||||| | ||||||||| ||||||||| |||| | |||| | ||| ||||||||||||||||| || | ||||||| |||  | ||||| ||||    
T  19629926 aacggtaaaatataaccaacggtaactaaacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcac-aatatattaaaaataat 19630023  T
Q  251 tctcaccaaaat 262  Q
    ||||||||||||    
T  19630024 tctcaccaaaat 19630035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 259
Target Start/End: Original strand, 27752084 - 27752175
Alignment:
Q  169 aacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaac-aacgattctcactaatcgataaaagtaattctcaccaa 259  Q
    |||||||| | ||||| |||||  |||||||||||||||||||| |||||||| || |  |||||| ||| | ||||| |||||||||||||    
T  27752084 aacggtcaattaacggtaaaatactaattattactctagtaactcagtaaaactaatggctctcaccaattgctaaaaataattctcaccaa 27752175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 14625770 - 14625663
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||| ||||| ||| |||| || ||| | ||| ||||||||||||||||| || | ||||||| |||  |||||| |||||    
T  14625770 aacggtaaaatataaccaacggttactaa-cggtaaaaact-aatcactacactagtaacttagtaaaataaaggttctcaccaattaataaaa-taatt 14625674  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  14625673 ctcaccaaaat 14625663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 16376032 - 16375925
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | | ||||| |||  |||||| |||||    
T  16376032 aacggtaaaatataaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggtcctcaccaattaataaaa-taatt 16375936  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  16375935 ctcaccaaaat 16375925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 16383356 - 16383249
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | | ||||| |||  |||||| |||||    
T  16383356 aacggtaaaatataaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggtcctcaccaattaataaaa-taatt 16383260  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  16383259 ctcaccaaaat 16383249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 262
Target Start/End: Complemental strand, 16814639 - 16814536
Alignment:
Q  156 gtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctca 255  Q
    ||||||| | ||||||||||||||| ||| |||| || ||| | ||| ||||||||||||||||| || | ||||||| |||  |||||| |||||||||    
T  16814639 gtaaaatataaccaacggtcactaa-cggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcaccaattaataaaa-taattctca 16814543  T
Q  256 ccaaaat 262  Q
    |||||||    
T  16814542 ccaaaat 16814536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 18823009 - 18822900
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||  | || |||||||||||||||| |||| || ||| | ||  ||||||||||||||||| || | ||||||||||    ||||| |||||    
T  18823009 aacggtaaaacataacaaacggtcactaaacggtaaaaact-aatcactagactagtaacttagtaaaataagggttctcactaaatattaaaaataatt 18822911  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  18822910 ctcaccaaaat 18822900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 25951609 - 25951552
Alignment:
Q  204 ctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    |||||||||||||||||||| | |||||||||| | || ||| ||||||||||||||||    
T  25951609 ctagtaacttagtaaaacaagggttctcactaa-ctattaaaataattctcaccaaaat 25951552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 1556621 - 1556704
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaa 236  Q
    ||||||||||  | ||||||||||||||||||| |||| | |||| | ||  ||||||||||||||||| || | ||||||||||    
T  1556621 aacggtaaaacataaccaacggtcactaaacggtaaaaac-taatcactaaactagtaacttagtaaaataagggttctcactaa 1556704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 12415471 - 12415388
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaa 236  Q
    ||||||||| | | ||||||||||||||||||| |||| | |||| | |||  |||||||||||||||| || | ||||||||||    
T  12415471 aacggtaaattataaccaacggtcactaaacggtaaaaac-taatcactacattagtaacttagtaaaataagggttctcactaa 12415388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 14152953 - 14153021
Alignment:
Q  169 aacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaat 237  Q
    |||||||||| ||||| |||||  |||||| ||| ||||||||||||||||| || | |||| ||||||    
T  14152953 aacggtcacttaacggtaaaatactaattactacactagtaacttagtaaaataatggttcttactaat 14153021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 15741849 - 15741766
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaa 236  Q
    ||||||||||| | ||||||||||||||||||| |||| | |||| | ||  |||||||| |||||||| || | ||||||||||    
T  15741849 aacggtaaaatataaccaacggtcactaaacggtaaaaac-taatcactatactagtaacatagtaaaataagggttctcactaa 15741766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 11460 - 11199
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |  ||| |||||||||||||||||||| ||    
T  11460 aatgaaagtgtgtggaattttctcataagagtatgtttttatatcaagtccccttaatgggcctaactcac-cacttaatggacttaacccatttctatt 11362  T
Q  102 caattcaaaatgtttctacacccagaatggtatttcactaataacggtta--aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatta- 198  Q
    |||  |||||||||||||| |||| || |||||||||||||||||||| |  ||||||||||||||||||||||||||||||||| |||||| ||||||     
T  11361 caaaccaaaatgtttctacgcccacaacggtatttcactaataacggtcaataacggtaaaatgtcaccaacggtcactaaacggtaaaatcctaattat 11262  T
Q  199 ttactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||| ||||||||||| |||| || |||||||||  |||||||||||||||||||||    
T  11261 ttactctagtgacttagtaaaataacggttttcactaatcactaaaagtaattctcaccaaaa 11199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 11321 - 11059
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||| || |||| ||||||||||||||||| |||||||||||||||||| | |    
T  11321 aaatgaaagtgtgaggaaatttctcataagagtaagtttttatactaagtctccctaatgggcctaactctcaaacttaatggacttaacccatttatat 11222  T
Q  101 tcaattcaaaatgtttctacacccagaatggtatttcactaataacggtta--aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatta 198  Q
    ||||||| ||||||||||||||||| || |||||||||||||||| ||| |  ||||||||||| |||||||||||||||||||||  ||||| ||||||    
T  11221 tcaattcgaaatgtttctacacccacaacggtatttcactaataatggtcaataacggtaaaatatcaccaacggtcactaaacgg-taaatcctaatta 11123  T
Q  199 -ttactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
     ||||||||||||||||||||||| ||| |  |||||||||  ||||| |||||| ||||||||    
T  11122 tttactctagtaacttagtaaaaccacggtgatcactaatcactaaaactaattcccaccaaaa 11059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 135; Significance: 2e-70; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 20529605 - 20529343
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttat-atcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctt 99  Q
    |||||||||||||||||||||||| ||| ||||| |||||| | |||||||||||||||| |||||||| ||||| || ||||||||||||| ||||||     
T  20529605 aaatgaaagtgtgaggaaatttcttatacgagtaggttttttttatcaagtccccttaatgggcctaaccctcaacct-aatggacttaaccaatttcta 20529507  T
Q  100 ttcaattcaaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    ||||  |||||| ||||||||||||| || |||||||||||||||||||| ||   |||||||||  ||||||||||||||||||| | |||||||||||    
T  20529506 ttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcaccaacggtcactaaacagtaaaatcttaat 20529407  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    | |||||||||||||||||||||||||| ||||| ||||||| | ||||||||||||||||||||    
T  20529406 t-ttactctagtaacttagtaaaacaactattcttactaatccacaaaagtaattctcaccaaaa 20529343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 4 - 261
Target Start/End: Original strand, 41247152 - 41247411
Alignment:
Q  4 tgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttca 103  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| ||| ||| |||||||| |||  |||||||||||||||||||||||| ||||    
T  41247152 tgaaagtgtgaggaaatttctcataagtgtatgtttttatgtcaagtctcctcaatgggcctaaccctc-cactcaatggacttaacccatttctattca 41247250  T
Q  104 -at-tcaaaatgtttctacacccagaatggtatttcactaataacggt---taaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatta 198  Q
     || ||||||||||||||||| |  || |||| |||||||||||||||    ||||||||||||||||| ||||||| |||| ||| ||||||||||||     
T  41247251 catctcaaaatgtttctacactc-taacggtaattcactaataacggtcaaaaaacggtaaaatgtcactaacggtctctaagcggtaaaatcttaatt- 41247348  T
Q  199 ttactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||||||||||||||||||| ||||||||||| |  ||||||||| ||||| |||||    
T  41247349 ttactctagtaacttagtaaaacaactattctcactaaccactaaaagtaactctcatcaaaa 41247411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 20561383 - 20561158
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||||| |||| || |||||||||||||||||||||||| ||||||||||||||||  |||||| ||||||||||||| |    
T  20561383 aaatgaaagtgtgaggaaatttctcacaagactaggtttttatatcaagtccccttaatgggcctaactctcaaacctaatggatttaacccatttctat 20561284  T
Q  101 tcaattca--aaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaa 195  Q
    |||||| |  |||||||||||| | || || |||| |||||||||| |||| |   ||||||||||  ||||||||||||||||||||| ||||| | ||    
T  20561283 tcaatttaacaaatgtttctacccacacaacggtaattcactaatatcggtcaaacaacggtaaaacatcaccaacggtcactaaacggtaaaatatcaa 20561184  T
Q  196 ttattactctagtaacttagtaaaac 221  Q
    ||||||||||||| || | |||||||    
T  20561183 ttattactctagtcacctggtaaaac 20561158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 20572945 - 20572720
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||||| |||| || |||||||||||||||||||||||| ||||||||||||||||  |||||| ||||||||||||| |    
T  20572945 aaatgaaagtgtgaggaaatttctcacaagactaggtttttatatcaagtccccttaatgggcctaactctcaaacctaatggatttaacccatttctat 20572846  T
Q  101 tcaattca--aaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaa 195  Q
    |||||| |  |||||||||||| | || || |||| |||||||||| |||| |   ||||||||||  ||||||||||||||||||||| ||||| | ||    
T  20572845 tcaatttaacaaatgtttctacccacacaacggtaattcactaatatcggtcaaacaacggtaaaacatcaccaacggtcactaaacggtaaaatatcaa 20572746  T
Q  196 ttattactctagtaacttagtaaaac 221  Q
    ||||||||||||| || | |||||||    
T  20572745 ttattactctagtcacctggtaaaac 20572720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 259
Target Start/End: Complemental strand, 19992807 - 19992552
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttcaa 104  Q
    ||||| ||||||||||| |||||||||||| |||||||||  ||||||||||| | |||||||| ||| | || |||| ||||||||||||||| |||||    
T  19992807 gaaagcgtgaggaaatt-ctcataagagtaggtttttatactaagtccccttattgggcctaaccctcca-cttaatgtacttaacccatttctattcaa 19992710  T
Q  105 ttcaaaa-tgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatt 200  Q
      ||||| ||||||||||| |  |  |||| ||||||||||||||| |   || ||||||||||||| |||||||||||||||| |||||||||||| ||    
T  19992709 accaaaaatgtttctacactctaaccggtaattcactaataacggtcatgtaatggtaaaatgtcactaacggtcactaaacggtaaaatcttaatt-tt 19992611  T
Q  201 actctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaa 259  Q
    ||||||||||||||||||||||||| ||||||||||||  |||||  ||||||||||||    
T  19992610 actctagtaacttagtaaaacaacggttctcactaatcactaaaaacaattctcaccaa 19992552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 25122934 - 25123193
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||| |||||||||||||||||||| ||  |||||||||||||||| ||||||| || ||||| ||| | || |||||||||||||||||||| ||    
T  25122934 aatgaaagggtgaggaaatttctcataagtgttggtttttatatcaagtctccttaatgggtctaaccctcca-cttaatggacttaacccatttctatt 25123032  T
Q  102 caattca-aaatgtttctacacccagaatggtatttcactaataacggttaaa---cggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    ||  ||  |||||||||||||| |  || | || |||| |||||||||| |||   ||||||||||| || |||||||||||||||| ||||||| ||||    
T  25123033 cacatctcaaatgtttctacactct-aacgataattcattaataacggtcaaataacggtaaaatgttactaacggtcactaaacggtaaaatctcaatt 25123131  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
     |||||||||||||||||||||||||| ||||||||||| | |  |||||||||||||||||||    
T  25123132 -ttactctagtaacttagtaaaacaactattctcactaa-ccactaaagtaattctcaccaaaa 25123193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 135 - 258
Target Start/End: Complemental strand, 6999942 - 6999816
Alignment:
Q  135 ttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctc 231  Q
    ||||||||||||||| ||   ||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||| ||||||    
T  6999942 ttcactaataacggtcaattaacggtaaaatgtcactaacggtcactaaacggtaaaatcttaatttttactctagtaacttagtgaaacaactattctc 6999843  T
Q  232 actaatcgataaaagtaattctcacca 258  Q
    ||||| |  ||||||||| ||||||||    
T  6999842 actaaacactaaaagtaactctcacca 6999816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 20653785 - 20653562
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    ||||||||||||| ||||||||||||||||| || | |||||||  | ||||| | ||| |||||||| ||||| || |||||||||||||||||||       
T  20653785 aaatgaaagtgtgtggaaatttctcataagactaggcttttatagtatgtcccataaatgggcctaaccctcaa-cttaatggacttaacccatttcaac 20653687  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    |||  || ||||||||||||||| || || |  | ||||||||||||||||||   ||| |||||| |||||||| |||||||||||| |||||  ||||    
T  20653686 tcacatctaaaatgtttctacacacacaacgacaattcactaataacggttaattaacgataaaatatcaccaacagtcactaaacggtaaaatactaat 20653587  T
Q  197 tattactctagtaacttagtaaaac 221  Q
    ||||||||||||||||  |||||||    
T  20653586 tattactctagtaactcggtaaaac 20653562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 79 - 261
Target Start/End: Original strand, 39115847 - 39116021
Alignment:
Q  79 aatggacttaacccattt-cttttcaattcaaaatgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcac 177  Q
    |||||||||||||||||| || |||||  |||||||||||||||| || || |||| || ||||||||| ||        |||||||||| |||||||||    
T  39115847 aatggacttaacccattttctattcaaaccaaaatgtttctacactcaaaaaggtaattaactaataacagt--------aaaatgtcactaacggtcac 39115938  T
Q  178 taaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||| |||||||||||| |||||||||||||||||||||| ||| ||||| ||||| |  |||||||||||| ||||||||    
T  39115939 taaacggtaaaatcttaatt-ttactctagtaacttagtaaaataactattcttactaaccactaaaagtaattcccaccaaaa 39116021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 109 - 261
Target Start/End: Original strand, 37612269 - 37612422
Alignment:
Q  109 aaatgtttctacacccagaatggtatttcactaataacggttaa--acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactcta 206  Q
    |||||||||||||| |  |  |||| ||||||||||||||| ||  ||| |||||| ||||||||||| ||||||||| |||||||| ||| ||||||||    
T  37612269 aaatgtttctacactctaaccggtaattcactaataacggtcaataacgataaaatatcaccaacggttactaaacggtaaaatcttcatt-ttactcta 37612367  T
Q  207 gtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||||||||||| ||||||||||| |  ||||||||| | |||||||||    
T  37612368 gtaacttagtaaaacaactattctcactaaccactaaaagtaactttcaccaaaa 37612422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 261
Target Start/End: Complemental strand, 22222028 - 22221844
Alignment:
Q  79 aatggacttaacccatttcttttcaattca-aaatgtttctacacccagaatggtatttcactaataacggtta--aacggtaaaatgtcaccaacggtc 175  Q
    |||||||||||||||||||| ||||  ||  |||||||||||||| |  |  |||| || |||||||||||| |  ||||||||||||||||  ||||||    
T  22222028 aatggacttaacccatttctattcacatctcaaatgtttctacactctaaccggtaattaactaataacggtaagtaacggtaaaatgtcactcacggtc 22221929  T
Q  176 actaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||||| ||||||||| || ||| ||||| |||||||||||| ||| ||| |||| ||||  |||||||||||||||||||||    
T  22221928 actaaacggtaaaatcttagtt-ttattctagcaacttagtaaaataactattttcacgaatcactaaaagtaattctcaccaaaa 22221844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 261
Target Start/End: Complemental strand, 22228370 - 22228186
Alignment:
Q  79 aatggacttaacccatttcttttcaattca-aaatgtttctacacccagaatggtatttcactaataacggtta--aacggtaaaatgtcaccaacggtc 175  Q
    |||||||||||||||||||| ||||  ||  |||||||||||||| |  |  |||| || |||||||||||| |  ||||||||||||||||  ||||||    
T  22228370 aatggacttaacccatttctattcacatctcaaatgtttctacactctaaccggtaattaactaataacggtaagtaacggtaaaatgtcactcacggtc 22228271  T
Q  176 actaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||||| ||||||||| || ||| ||||| |||||||||||| ||| ||| |||| ||||  |||||||||||||||||||||    
T  22228270 actaaacggtaaaatcttagtt-ttattctagcaacttagtaaaataactattttcacgaatcactaaaagtaattctcaccaaaa 22228186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 29760589 - 29760697
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| ||||||||||| |  |||||||||||    
T  29760589 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactattctcactaaacactaaaagtaatt 29760686  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  29760687 cccaccaaaat 29760697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 275080 - 275187
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| ||||||| |||||  |||||||||||    
T  275080 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactattctcattaatcactaaaagtaatt 275177  T
Q  252 ctcaccaaaa 261  Q
    | ||||||||    
T  275178 cccaccaaaa 275187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 640769 - 640662
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| ||||||| |||||  |||||||||||    
T  640769 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactattctcattaatcactaaaagtaatt 640672  T
Q  252 ctcaccaaaa 261  Q
    | ||||||||    
T  640671 cccaccaaaa 640662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 826575 - 826468
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| ||||||| |||||  |||||||||||    
T  826575 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactattctcattaatcactaaaagtaatt 826478  T
Q  252 ctcaccaaaa 261  Q
    | ||||||||    
T  826477 cccaccaaaa 826468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 262
Target Start/End: Complemental strand, 16404614 - 16404522
Alignment:
Q  169 aacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    |||||||||||||||| ||||||| |||| |||||||||||||||||||||| ||| |||||||||||||  |||||||||||| ||| |||||    
T  16404614 aacggtcactaaacggtaaaatctcaatt-ttactctagtaacttagtaaaataactattctcactaatcactaaaagtaattcacactaaaat 16404522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 16193482 - 16193379
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| |||| |||||||||||||||| ||||||| ||||  ||||||||||||||| | ||| ||| |||||||||||||  ||||||| |||    
T  16193482 aacggtaaaatatcactaacggtcactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagttatt 16193385  T
Q  252 ctcacc 257  Q
    ||||||    
T  16193384 ctcacc 16193379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 24716479 - 24716372
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| || ||||||||||||| ||||||  ||||  ||||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  24716479 aacggtaaaatgtcactaatggtcactaaacggtaaaatcacaatt--tactctagtaacttaatgaaataactattctcactaatcattaaaagtaatt 24716382  T
Q  252 ctcaccaaaa 261  Q
    | ||||||||    
T  24716381 cccaccaaaa 24716372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 43373118 - 43373011
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||  |||||||||||||||| ||||||| ||||  ||||||||||||||| | ||| ||| ||||||||||| |  |||||||||||    
T  43373118 aacggtaaaatgtcaataacggtcactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaaacactaaaagtaatt 43373021  T
Q  252 ctcaccaaaa 261  Q
    | ||||||||    
T  43373020 cccaccaaaa 43373011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 17285857 - 17285967
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||   | ||||||||||| || || |||||  |||||||||| ||||||||||||||||| || | |||||||||| || ||||| |||||    
T  17285857 aacggtaaaatactagcaacggtcacttaatggtaaaatactaattattaccctagtaacttagtaaaataatggttctcactaaacgctaaaaataatt 17285956  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  17285957 ctcaccaaaat 17285967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 24385379 - 24385276
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| |||| || ||||||||||||| ||||||| ||||  ||||||||||||||| | ||| ||| ||||||||||| |  |||||||||||    
T  24385379 aacggtaaaatatcactaatggtcactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaaacactaaaagtaatt 24385282  T
Q  252 ctcacc 257  Q
    ||||||    
T  24385281 ctcacc 24385276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 233
Target Start/End: Original strand, 21681501 - 21681734
Alignment:
Q  3 atgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttc 102  Q
    |||||||||||||||||||||   |||||  | |||||||||  ||||||||| ||| ||||||||||| || ||  |||||||||| ||||| |   ||    
T  21681501 atgaaagtgtgaggaaatttcctctaagacaaggtttttatagtaagtcccctaaatgggcctaactctaaagcttcatggacttaa-ccattccaactc 21681599  T
Q  103 aattc-aaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatta 198  Q
    || || ||||||||||||||| || || || |   ||||||||||||| |   |||  |||||| ||||||||||  ||||||||| ||||| | ||||     
T  21681600 aaatctaaaatgtttctacacacacaacggcaaaccactaataacggtcaaataactataaaatatcaccaacggctactaaacggtaaaatataaattt 21681699  T
Q  199 ttactctagtaacttagtaaaacaacgattctcac 233  Q
     ||||||||||| |||||||||| ||| |||||||    
T  21681700 atactctagtaatttagtaaaacgacggttctcac 21681734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 262
Target Start/End: Original strand, 38534314 - 38534410
Alignment:
Q  166 accaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    |||||| |||||| ||||| |||||  |||| | ||||||||||||||||||||| |||| |||||||||| |  ||||| ||||||||||||||||    
T  38534314 accaactgtcacttaacggtaaaatactaatcactactctagtaacttagtaaaataacggttctcactaaacactaaaaataattctcaccaaaat 38534410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 24928444 - 24928336
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||  |||||||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| ||||||| ||| |  ||| |||||||    
T  24928444 aacggtaaaatgtcaataacggtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactattctcaataaacactaatagtaatt 24928347  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  24928346 cccaccaaaat 24928336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 18613019 - 18613128
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||| ||||||||||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||| |  ||||| |||||    
T  18613019 aacggtaaaatataaccaacgatcactaaacggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaaacattaaaaataatt 18613117  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  18613118 ctcaccaaaat 18613128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 23837851 - 23837961
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | | ||||||||||| ||||| |||||  |||||| ||| ||||||||||||||| | || | |||||||||| |  ||||| |||||    
T  23837851 aacggtaaaatattaacaacggtcacttaacggtaaaatactaattactacactagtaacttagtaagataatggttctcactaaacactaaaaataatt 23837950  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  23837951 ctcaccaaaat 23837961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 39446364 - 39446290
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaa-cggaaaaatcttaattattactctagtaacttagtaaaacaacg 225  Q
    ||||||||||| |||||||||||||||||| ||| |||||  |||||| ||||||||||||||||||||| ||||    
T  39446364 aacggtaaaatatcaccaacggtcactaaaacggtaaaatactaattactactctagtaacttagtaaaataacg 39446290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 262
Target Start/End: Complemental strand, 21494075 - 21493970
Alignment:
Q  156 gtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctca 255  Q
    ||||||| | ||||||||||| ||||||| |||| || ||||| ||| ||||| ||||||||||| || | |||||||||| |  ||||| |||||||||    
T  21494075 gtaaaatataaccaacggtcattaaacggtaaaaact-aattagtacactagtgacttagtaaaataatggttctcactaaacactaaaaataattctca 21493977  T
Q  256 ccaaaat 262  Q
    |||||||    
T  21493976 ccaaaat 21493970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 262
Target Start/End: Complemental strand, 24105836 - 24105741
Alignment:
Q  166 accaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    ||||||||||||||||||| |||| || ||| | ||| ||||||||||||||||| || | ||||||||||    ||||| ||||||||||||||||    
T  24105836 accaacggtcactaaacggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaaatattaaaaataattctcaccaaaat 24105741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 2545570 - 2545679
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcga-taaaagtaat 250  Q
    ||||||||||| | ||||||||||| ||||||| |||| | |||| ||||| ||||||||||||||||| || | ||||||| |||  | ||||| ||||    
T  2545570 aacggtaaaatataaccaacggtcattaaacggtaaaaac-taatcattacactagtaacttagtaaaataagggttctcac-aatatattaaaaataat 2545667  T
Q  251 tctcaccaaaat 262  Q
    ||||||||||||    
T  2545668 tctcaccaaaat 2545679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 262
Target Start/End: Complemental strand, 13661898 - 13661794
Alignment:
Q  156 gtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctca 255  Q
    ||||||| | ||||||||||||||||||| ||||  ||||| | ||| ||||||||||||||||| || | ||||||||||   || ||| |||||||||    
T  13661898 gtaaaatataaccaacggtcactaaacggtaaaa-attaatcactacactagtaacttagtaaaataagggttctcactaa-atattaaaataattctca 13661801  T
Q  256 ccaaaat 262  Q
    |||||||    
T  13661800 ccaaaat 13661794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 262
Target Start/End: Complemental strand, 13720561 - 13720457
Alignment:
Q  156 gtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctca 255  Q
    ||||||| | ||||||||||||||||||| ||||  ||||| | ||| ||||||||||||||||| || | ||||||||||   || ||| |||||||||    
T  13720561 gtaaaatataaccaacggtcactaaacggtaaaa-attaatcactacactagtaacttagtaaaataagggttctcactaa-atattaaaataattctca 13720464  T
Q  256 ccaaaat 262  Q
    |||||||    
T  13720463 ccaaaat 13720457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 22906865 - 22906758
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| ||||||||||||||| ||| |||| || ||| |  || ||||||||||||||||| || | |||||||||||  |||||| | |||    
T  22906865 aacggtaaaatgtaaccaacggtcactaa-cggtaaaaact-aatcaccacactagtaacttagtaaaataagggttctcactaattaataaaa-tgatt 22906769  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  22906768 ctcaccaaaat 22906758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 262
Target Start/End: Complemental strand, 16038498 - 16038403
Alignment:
Q  166 accaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    |||||||||||| |||||| |||| || ||| | ||| ||||||||||||||||| || | ||||||||||    ||||| ||||||||||||||||    
T  16038498 accaacggtcaccaaacggtaaaaact-aatcagtacactagtaacttagtaaaataagggttctcactaaatattaaaaataattctcaccaaaat 16038403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 22148061 - 22148170
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcga-taaaagtaat 250  Q
    ||||||||||| | ||||||||||||||||||| |||| | |||| | ||| ||||||||||| ||||| || | ||||||| |||  | ||||| ||||    
T  22148061 aacggtaaaatataaccaacggtcactaaacggtaaaaac-taatcactacactagtaacttactaaaataagggttctcac-aatatattaaaaataat 22148158  T
Q  251 tctcaccaaaat 262  Q
    ||||||||||||    
T  22148159 tctcaccaaaat 22148170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 3430899 - 3430792
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||| ||  |||| || ||| | ||| ||||||||||||||||| || | |||||||||| | || ||| |||||    
T  3430899 aacggtaaaatataaccaacggtcactaa-cgctaaaaact-aatcactacactagtaacttagtaaaataaaggttctcactaa-ctattaaaataatt 3430803  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  3430802 ctcaccaaaat 3430792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 24549588 - 24549695
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | | ||||||||||||| ||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  24549588 aacggtaaaatataatcaacggtcactaa-cggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 24549684  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  24549685 ctcaccaaaat 24549695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 30121330 - 30121437
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||| || | ||||| ||||||||| ||| |||| || ||||| ||| ||||||||||||||||| || | |||||||||||  |||||| | |||    
T  30121330 aacggtaacatctaaccaaaggtcactaa-cggtaaaaact-aattactacactagtaacttagtaaaataagggttctcactaattaataaaa-tgatt 30121426  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  30121427 ctcaccaaaat 30121437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 260
Target Start/End: Complemental strand, 21844214 - 21844110
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||| ||| ||||   |||| ||||| |||||||||||||| || || | |||||||||||  || ||| |||||    
T  21844214 aacggtaaaatataaccaacggtcactaa-cggtaaaac--taatcattacactagtaacttagtataataagggttctcactaat-tattaaaataatt 21844119  T
Q  252 ctcaccaaa 260  Q
    |||||||||    
T  21844118 ctcaccaaa 21844110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 260
Target Start/End: Complemental strand, 21851607 - 21851503
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||| ||| ||||   |||| ||||| |||||||||||||| || || | |||||||||||  || ||| |||||    
T  21851607 aacggtaaaatataaccaacggtcactaa-cggtaaaac--taatcattacactagtaacttagtataataagggttctcactaat-tattaaaataatt 21851512  T
Q  252 ctcaccaaa 260  Q
    |||||||||    
T  21851511 ctcaccaaa 21851503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 132; Significance: 1e-68; HSPs: 6)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 61301 - 61563
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    ||||||||||||||||||||| |||||| |||| ||||||||||||| |||||||||| ||| ||||||||||||| ||| ||||||||| |||||| ||    
T  61301 aatgaaagtgtgaggaaatttttcataacagtaggtttttatatcaattccccttaatgggcataactctcaaacttaatagacttaacctatttctatt 61400  T
Q  102 caattcaaaatgtttctacacccagaatggtatttcactaataacggtta--aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatta- 198  Q
    ||| |||||||||||||||||||| || |||||||||||||||||||| |  ||  ||||||| ||||||||||||| |||| || |||||| ||||||     
T  61401 caaatcaaaatgtttctacacccacaacggtatttcactaataacggtcaataagtgtaaaatatcaccaacggtcaataaatggtaaaatcctaattat 61500  T
Q  199 ttactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||||||||||||||||||| ||| |||||| ||| |  ||||| |||||||||||||||    
T  61501 ttactctagtaacttagtaaaaccacggttctcattaagcactaaaaataattctcaccaaaa 61563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 79586 - 79419
Alignment:
Q  57 aataggcctaactctcaaactcaatggacttaacccatttcttttcaattca-aaatgtttctacacccagaatggtatttcactaataacggttaa--- 152  Q
    |||||||||||| ||||| || |||||||||||||||||||| ||||| ||| ||||||||||| || || || | |||||||| ||||||||| ||       
T  79586 aataggcctaaccctcaa-cttaatggacttaacccatttctattcaaatcacaaatgtttctagacacacaacgctatttcacaaataacggtcaatta 79488  T
Q  153 acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaac 221  Q
    |||||||||  |||||||| |||| ||| ||| ||||| | ||||||||||||||| |||  |||||||    
T  79487 acggtaaaacatcaccaacagtcattaaccggtaaaatatcaattattactctagtcactcggtaaaac 79419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 164620 - 164511
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||||||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||| | |||||  |||||    
T  164620 aacggtaaaatatgaccaacggtcactaaacggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaaacaataaatataatt 164522  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  164521 ctcaccaaaat 164511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 70305 - 70154
Alignment:
Q  74 aactcaatggacttaacccatttcttttcaattca-aaatgtttctacacccagaatggtatttcactaataacggt---taaacggtaaaatgtcacca 169  Q
    |||| |||||||||||| ||||||| ||||| ||| ||||||||||||||  | || | ||||||||||||||||||   | |||  |||||  ||||||    
T  70305 aacttaatggacttaactcatttctattcaaatcacaaatgtttctacacaaacaacgatatttcactaataacggtcaattaacaataaaacatcacca 70206  T
Q  170 acggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaac 221  Q
    || |||||||| ||| ||||| | ||||||||||||||| |||  |||||||    
T  70205 acagtcactaaccggtaaaatatcaattattactctagtcactcggtaaaac 70154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 172522 - 172578
Alignment:
Q  199 ttactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctca 255  Q
    |||||||||||||||| | ||| ||| |||||||||||||  |||||||||||||||    
T  172522 ttactctagtaacttaatgaaataactattctcactaatcactaaaagtaattctca 172578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 178225 - 178281
Alignment:
Q  199 ttactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctca 255  Q
    |||||||||||||||| | ||| ||| |||||||||||||  |||||||||||||||    
T  178225 ttactctagtaacttaatgaaataactattctcactaatcactaaaagtaattctca 178281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 1e-68; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 35522103 - 35521838
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  | |||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| ||||||| |    
T  35522103 aaatgaaagtgtgaggaaatttcctctaagacaaggtttttatattaagtccccttaatgggcctaactctcaaacttaatggacttaactcatttctat 35522004  T
Q  101 tcaattcaaaatgtttctacacccagaatgg-----tatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatct 192  Q
    |||| ||||||||||||||||| ||||||||     ||||| |||||||||||| |   ||||||||||  |||||||||||| ||||| || ||||| |    
T  35522003 tcaaatcaaaatgtttctacacacagaatggtacgatatttaactaataacggtcaaataacggtaaaacatcaccaacggtctctaaatggtaaaatat 35521904  T
Q  193 taattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcacca 258  Q
     |||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||    
T  35521903 caattattactctagtaacttagtaaaacaacggttctcactaatcactaaaagtaattctcacca 35521838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 22402862 - 22402600
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||| || |||||||||||||  ||| ||||||||| |||||||||||||| |||||||| ||||| || |||||||| ||||||||||| |    
T  22402862 aaatgaaagtgtaagaaaatttctcataaatgtaggtttttataccaagtccccttaatgggcctaaccctcaa-cttaatggactcaacccatttctat 22402764  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggttaaa---cggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    |||  || ||||||||||||||| |  |  |||| ||||||||||||||| |||   ||||||||| |||| |||||||||||||||| |||||||||||    
T  22402763 tcacatctaaaatgtttctacactctaaccggtaattcactaataacggtcaaataacggtaaaatatcactaacggtcactaaacggtaaaatcttaat 22402664  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    | |||||||||||||||||||||||||| ||| | |||||||  |||||||||||||||||||||    
T  22402663 t-ttactctagtaacttagtaaaacaactatttttactaatctttaaaagtaattctcaccaaaa 22402600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 74 - 261
Target Start/End: Original strand, 35055315 - 35055504
Alignment:
Q  74 aactcaatggacttaacccatttcttttcaattcaaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaa 170  Q
    |||| |||||||||||||||||||||||||  |||||||||||||||||  | || ||||||||||||||||| ||||   |||||||||||||||||||    
T  35055315 aacttaatggacttaacccatttcttttcacatcaaaatgtttctacacatacaacggtatttcactaataacagttaattaacggtaaaatgtcaccaa 35055414  T
Q  171 cggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||||||| |||||||||||| ||||||||||||||| ||||||||||| ||||||||||||  ||||| |||||||||||||||    
T  35055415 cggtcactaaacggtaaaatcttaatt-ttactctagtaactttgtaaaacaacggttctcactaatcactaaaattaattctcaccaaaa 35055504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 27329517 - 27329254
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  | | |||| ||  ||||  ||||||  ||||||||||||||||| |||||| ||||||||||||| |    
T  27329517 aaatgaaagtgtgaggaaatttcctctaagacaaggcttttgtagtaagtttccttaacgggcctaactctcaaacttaatggatttaacccatttctat 27329418  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggttaaa---cggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    |||  || ||||||||||||||| || || ||||  |||||||||||||| |||   | ||||||||||||||||||||||||| ||| |||| ||||||    
T  27329417 tcacatctaaaatgtttctacactcacaacggtaaatcactaataacggtcaaataacagtaaaatgtcaccaacggtcactaa-cggtaaaaccttaat 27329319  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||||||| |||||||||||||  ||||||||||||  |||||||||||||||||||||    
T  27329318 tattactctagtaatttagtaaaacaacagttctcactaatcactaaaagtaattctcaccaaaa 27329254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 21718722 - 21718936
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||| | |||||||||||||||||||||||| ||||||||||| || |  |||||| ||||||||||||| |    
T  21718722 aaatgaaagtgtgaggaaatttcctctaagagaaggtttttatatcaagtccccttaatgggcctaactctgaaccctaatggatttaacccatttctat 21718821  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    |||| || |||||||||||||   || |  |||| ||||||||||||||| |   ||||||||||  ||||||||||||||||||||| ||||| | |||    
T  21718822 tcaaatcaaaaatgtttctacctacacagcggtaattcactaataacggtcaaacaacggtaaaacatcaccaacggtcactaaacggtaaaatatcaat 21718921  T
Q  197 tattactctagtaac 211  Q
    ||||||| |||||||    
T  21718922 tattactttagtaac 21718936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 2 - 256
Target Start/End: Original strand, 41212514 - 41212770
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||||||||||||||||| ||||||||||| ||||    ||| |   | |   |||||| ||||| || |||||||||||||||||||| ||    
T  41212514 aatgaaagtgtgaggaaatttctcatgagagtatgtttatatagtgtgtctcacaattgaacctaaccctcaa-cttaatggacttaacccatttctatt 41212612  T
Q  102 caattca-aaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    ||  ||  |||||||||||||| |  |  |||| || |||||||||||| ||   ||||||||||||||| |||||||||||||||| ||||||| ||||    
T  41212613 cacatctcaaatgtttctacactctaaccggtaattaactaataacggtgaagtaacggtaaaatgtcactaacggtcactaaacggtaaaatctcaatt 41212712  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcac 256  Q
     |||||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||    
T  41212713 -ttactctagtaacttagtaaaataactattctcactaatcactaaaagtaattctcac 41212770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 49968145 - 49968397
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| ||||||||||||  ||| | |||||||||||||||||| ||    
T  49968145 aatgaaagtgtgaggaaatttctcataagtgtaggtttttataccaagtccccttaatgggcctaactctc-cacttagtggacttaacccatttctatt 49968243  T
Q  102 ca-attcaaaatgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatt 200  Q
    || ||   |||||||||||||| |  |  |||| |||||||||        ||||||||||| |||||||||||||||||| || ||||| | |||||||    
T  49968244 cacatatcaaatgtttctacactctaaccggtaattcactaat--------aacggtaaaatatcaccaacggtcactaaatggtaaaatatcaattatt 49968335  T
Q  201 actctagtaacttagtaaaac-aacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||||   ||||||| || | ||| |||||| |  ||||||||||| |||||||||    
T  49968336 actctagtaacccggtaaaactaatggttcacactaaacactaaaagtaattatcaccaaaa 49968397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 44320268 - 44320376
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| || |||||||||||||||| ||||||||| || |||||||||||||||||||||| ||| |||||||||||||  |||||||||||    
T  44320268 aacggtaaaatgttactaacggtcactaaacggtaaaatcttagtt-ttactctagtaacttagtaaaataactattctcactaatcactaaaagtaatt 44320366  T
Q  252 ctcaccaaaa 261  Q
    ||||||||||    
T  44320367 ctcaccaaaa 44320376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 20887444 - 20887337
Alignment:
Q  154 cggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattct 253  Q
    |||||||||||||| |||||||||||||| | ||||||| |||| |||||||||||||||||||||| ||| |||||||||||||  ||||||||||||     
T  20887444 cggtaaaatgtcactaacggtcactaaacagtaaaatctcaatt-ttactctagtaacttagtaaaataactattctcactaatcactaaaagtaattcc 20887346  T
Q  254 caccaaaat 262  Q
    |||||||||    
T  20887345 caccaaaat 20887337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 13103770 - 13103879
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||| | ||||||| |||| |||||||||||||||||||||| ||| |||||||||||||  |||||||||||    
T  13103770 aacggtaaaatgtcactaacggtcactaaaccgtaaaatctcaatt-ttactctagtaacttagtaaaataactattctcactaatcactaaaagtaatt 13103868  T
Q  252 ctcaccaaaat 262  Q
    | ||| |||||    
T  13103869 cccactaaaat 13103879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 21860648 - 21860755
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||||  ||||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  21860648 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaatt 21860745  T
Q  252 ctcaccaaaa 261  Q
    | ||||||||    
T  21860746 cccaccaaaa 21860755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 44034588 - 44034481
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||||  ||| ||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  44034588 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaatt--taccctagtaacttaatgaaataactattctcactaatcactaaaagtaatt 44034491  T
Q  252 ctcaccaaaa 261  Q
    ||||||||||    
T  44034490 ctcaccaaaa 44034481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 254
Target Start/End: Original strand, 20931956 - 20932056
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  20931956 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactattctcactaatcactaaaagtaatt 20932053  T
Q  252 ctc 254  Q
    |||    
T  20932054 ctc 20932056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 20446297 - 20446404
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| |||| ||||||||  |||||||||||    
T  20446297 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactattcccactaatcactaaaagtaatt 20446394  T
Q  252 ctcaccaaaa 261  Q
    | ||||||||    
T  20446395 cccaccaaaa 20446404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 20532061 - 20532168
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| |||| ||||||||  |||||||||||    
T  20532061 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactattcccactaatcactaaaagtaatt 20532158  T
Q  252 ctcaccaaaa 261  Q
    | ||||||||    
T  20532159 cccaccaaaa 20532168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 261
Target Start/End: Original strand, 41219061 - 41219148
Alignment:
Q  173 gtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||| || ||||||||||||  |||||| ||||||| ||||||    
T  41219061 gtcactaaacggtaaaatcttaatt-ttactctagtaacttagtaaaacatcggttctcactaatcactaaaagcaattctcgccaaaa 41219148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 254
Target Start/End: Original strand, 20913641 - 20913741
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  |||||||||| ||||| | ||  ||| |||||||||||||  |||||||||||    
T  20913641 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtgacttaatgaagtaactattctcactaatcactaaaagtaatt 20913738  T
Q  252 ctc 254  Q
    |||    
T  20913739 ctc 20913741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 261
Target Start/End: Complemental strand, 51627273 - 51627181
Alignment:
Q  169 aacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||| ||||| |||||  |||||| ||||||||||||||||||||| || | |||||||||| |  ||||| |||||||||||||||    
T  51627273 aacggtcacttaacggtaaaatactaattactactctagtaacttagtaaaataatggttctcactaaacactaaaaataattctcaccaaaa 51627181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 16646562 - 16646672
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcact-aatcgataaaagtaat 250  Q
    ||||||||||| | ||||||||||||| ||||| |||||  |||||| ||| ||||||||||||||||| || | |||||||| || |  ||||| ||||    
T  16646562 aacggtaaaatattaccaacggtcacttaacggtaaaatactaattactaccctagtaacttagtaaaataatggttctcactaaaacactaaaaataat 16646661  T
Q  251 tctcaccaaaa 261  Q
    |||||||||||    
T  16646662 tctcaccaaaa 16646672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 16657303 - 16657373
Alignment:
Q  166 accaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaa 236  Q
    ||||||||||||| ||||| ||| | ||||||| ||||||||||||||||||||| |||| ||||||||||    
T  16657303 accaacggtcacttaacggtaaactattaattactactctagtaacttagtaaaataacggttctcactaa 16657373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 260
Target Start/End: Original strand, 20346676 - 20346748
Alignment:
Q  186 aaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaa 260  Q
    ||||||| |||| |||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||| |||||    
T  20346676 aaaatctcaatt-ttactctagtaacttagtaaaataactattctcactaatc-ataaaagtaattctcgccaaa 20346748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 262
Target Start/End: Original strand, 41394844 - 41394948
Alignment:
Q  155 ggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctc 254  Q
    ||||||||||||| |||||| ||||||||| ||||||| |||  |||||||||||||||| |||||  || ||||||||||||   |||||||||||| |    
T  41394844 ggtaaaatgtcactaacggttactaaacggtaaaatctcaat--ttactctagtaacttaataaaa-tactattctcactaattactaaaagtaattccc 41394940  T
Q  255 accaaaat 262  Q
    || |||||    
T  41394941 actaaaat 41394948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 17023628 - 17023737
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||   | ||||||||||| ||||| |||||  |||||| ||| ||||||||||||||||| || | |||||||||| |  ||||| |||||    
T  17023628 aacggtaaaatactaacaacggtcacttaacggtaaaatactaattactacactagtaacttagtaaaataatggttctcactaaacactaaaa-taatt 17023726  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  17023727 ctcaccaaaat 17023737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 20254936 - 20255045
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||| | | ||||||||||||||||||| |||| | |||| | ||| ||||||||||||||||| || | ||||||||||    ||||| |||||    
T  20254936 aacggtaaattataaccaacggtcactaaacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaaatattaaaaataatt 20255034  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  20255035 ctcaccaaaat 20255045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 19603774 - 19603842
Alignment:
Q  168 caacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaa 236  Q
    ||||||||||| ||||| ||||| ||||||| ||| ||||||||||||||||| || | ||||||||||    
T  19603774 caacggtcacttaacggtaaaatattaattactacactagtaacttagtaaaataatgtttctcactaa 19603842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 22238439 - 22238332
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | |||||||||||||||  | ||||||  |||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  22238439 aacggtaaaatataaccaacggtcactaacggtaaaaat--taatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 22238343  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  22238342 ctcaccaaaat 22238332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 20346522 - 20346637
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttcaa 104  Q
    ||||||||| ||||||| |||||||||||| ||||| |||  ||||| ||||| | |||||||| ||| | || |||||||||||||||||||| |||||    
T  20346522 gaaagtgtgtggaaatt-ctcataagagtaggtttt-atactaagtctccttattgggcctaaccctcca-cttaatggacttaacccatttctattcaa 20346618  T
Q  105 ttc-aaaatgtttctacac 122  Q
      | |||||||||||||||    
T  20346619 accaaaaatgtttctacac 20346637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 24568385 - 24568278
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| ||   |||||||||||  || ||| |||||    
T  24568385 aacggtaaaatgtaaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagagttctcactaat-tattaaaataatt 24568289  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  24568288 ctcaccaaaat 24568278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 35055250 - 35055292
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttata 44  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  35055250 aatgaaagtgtgaggaaatttctcaaaagagtaggtttttata 35055292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 262
Target Start/End: Original strand, 27675438 - 27675531
Alignment:
Q  169 aacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    |||| ||||| ||||| |||||  |||||| ||| ||||||||||||||||| || | ||||||||||  | ||||| |||||||||| |||||    
T  27675438 aacgatcacttaacggtaaaatactaattactacactagtaacttagtaaaataatggttctcactaaatgctaaaaataattctcactaaaat 27675531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9783818 - 9783778
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgttttt 41  Q
    |||||||||||||||||||||||||||||| ||| ||||||    
T  9783818 aaatgaaagtgtgaggaaatttctcataagtgtaggttttt 9783778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 37844099 - 37844059
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatct 192  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  37844099 aacggtaaaatgtcactaacggtcactaaacggtaaaatct 37844059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 7640576 - 7640469
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| | ||||||||||||| ||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  7640576 aacggtaaaatgtaatcaacggtcactaa-cggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 7640480  T
Q  252 ctcaccaaaat 262  Q
    ||||| |||||    
T  7640479 ctcacaaaaat 7640469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 17149181 - 17149264
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaat 237  Q
    ||||||||||| | || ||||||||||||  |||||||   |||| ||||| ||||||||||||||||| || | |||||||||||    
T  17149181 aacggtaaaatataactaacggtcactaacgggaaaaac--taatcattacactagtaacttagtaaaataagggttctcactaat 17149264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 22228425 - 22228532
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | ||||||||||   || ||| |||||    
T  22228425 aacggtaaaatataaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaa-atattaaaataatt 22228521  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  22228522 ctcaccaaaat 22228532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 46523993 - 46524100
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| | |||||||||| || ||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  46523993 aacggtaaaatgtaatcaacggtcaccaa-cggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 46524089  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  46524090 ctcaccaaaat 46524100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 20177823 - 20177908
Alignment:
Q  174 tcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaa 259  Q
    ||||| ||||| |||||  |||||| ||| ||||||||||||||||| || | || ||||||| |  ||||| |||||||||||||    
T  20177823 tcacttaacggtaaaatactaattactacactagtaacttagtaaaataatggttttcactaaactctaaaaataattctcaccaa 20177908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 262
Target Start/End: Complemental strand, 41219418 - 41219349
Alignment:
Q  193 taattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    |||||| ||| ||||||||||||||||| || | |||||||||| |  ||||| |||||| |||||||||    
T  41219418 taattactacactagtaacttagtaaaataatggttctcactaaacactaaaaataattcccaccaaaat 41219349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 20954985 - 20954929
Alignment:
Q  204 ctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaa 260  Q
    ||||||||||||||||| || | || ||||||| || ||||| ||||||||||||||    
T  20954985 ctagtaacttagtaaaataatggttatcactaaacgctaaaaataattctcaccaaa 20954929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 109215 - 108955
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||| ||||||||||||||||| || |||||||||  ||||| | | ||| || ||||||||||| || |||||||||||||||||||| ||    
T  109215 aatgaaagtgtgtggaaatttctcataagactaggtttttatagtaagtctcataaatgggtctaactctcaa-cttaatggacttaacccatttctatt 109117  T
Q  102 caattcaaaatgtttctacacccagaatggtatttcactaataacggttaa--acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattat 199  Q
    ||| ||||||||||||||| | || ||  ||| ||||||||||||||| ||  |||||||||| |||||||| |||||||||||  |||| |||||||||    
T  109116 caaatcaaaatgtttctacccacacaacagtaattcactaataacggtcaataacggtaaaatatcaccaactgtcactaaacgataaaaccttaattat 109017  T
Q  200 tactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||||||||||||||||| |||| ||||||||||||  ||||| |||||||||||||||    
T  109016 tactctagtaacttagtaaaaaaacggttctcactaatcactaaaattaattctcaccaaaa 108955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 117716 - 117456
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||| ||||||||||||||||| || |||||||||  ||||| | | ||| || ||||||||||| || |||||||||||||||||||| ||    
T  117716 aatgaaagtgtgtggaaatttctcataagactaggtttttatagtaagtctcataaatgggtctaactctcaa-cttaatggacttaacccatttctatt 117618  T
Q  102 caattcaaaatgtttctacacccagaatggtatttcactaataacggttaa--acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattat 199  Q
    ||| ||||||||||||||| | || ||  ||| ||||||||||||||| ||  |||||||||| |||||||| |||||||||||  |||| |||||||||    
T  117617 caaatcaaaatgtttctacccacacaacagtaattcactaataacggtcaataacggtaaaatatcaccaactgtcactaaacgataaaaccttaattat 117518  T
Q  200 tactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||||||||||||||||| |||| ||||||||||||  ||||| |||||||||||||||    
T  117517 tactctagtaacttagtaaaaaaacggttctcactaatcactaaaattaattctcaccaaaa 117456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 1e-62; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 20813300 - 20813039
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||| ||||||||||||||| | || |||| ||||||||||||||||||| ||||||||||||  ||| |||||||||||||||||||| ||    
T  20813300 aatgaaagtgtgtggaaatttctcataaaactaggtttctatatcaagtccccttaatgggcctaactctc-cacttaatggacttaacccatttctatt 20813202  T
Q  102 caattca-aaatgtttctacacccagaatggtatttcactaataacggt---taaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    ||| ||| |||||||||||| |||| || ||||||| ||||||||||||     ||||||||||| |||| ||| |||||||||||| ||||||||||||    
T  20813201 caaatcacaaatgtttctacccccacaacggtattttactaataacggtcgaataacggtaaaatatcacaaacagtcactaaacggtaaaatcttaatt 20813102  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
     |||||||||||||||||||||||||| ||||| ||||| |  ||||||||| |||||||||||    
T  20813101 -ttactctagtaacttagtaaaacaactattcttactaaccactaaaagtaactctcaccaaaa 20813039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 5 - 262
Target Start/End: Original strand, 44347322 - 44347580
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttcaa 104  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||||| | ||| | |||||||| ||| | || |||||||||||||||||||| |||||    
T  44347322 gaaagtgtgaggaaatt-ctcataagagtatgtttttatactaagtctctttattgggcctaaccctcca-cttaatggacttaacccatttctattcaa 44347419  T
Q  105 ttcaaaa-tgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatt 200  Q
      ||||| ||||||||||| |  |  |||| ||||||||||||||| ||   ||||||||||||||  |||||||||||||||| ||||||||| || ||    
T  44347420 aacaaaaatgtttctacactctaatcggtaattcactaataacggtcaagtaacggtaaaatgtcattaacggtcactaaacggtaaaatcttagtt-tt 44347518  T
Q  201 actctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    |||||||||||||||||||| ||| |||||||||||||  |||||||||||| |||||||||    
T  44347519 actctagtaacttagtaaaataactattctcactaatcactaaaagtaattcccaccaaaat 44347580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 819683 - 819431
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||||||||  ||| |||||||||||||||| ||||||| || || || ||||| || |||||||||||||||||||| |    
T  819683 aaatgaaagtgtgaggaaatttctcataaatgtaggtttttatatcaagtctccttaatgggtctgaccctcaa-cttaatggacttaacccatttctat 819585  T
Q  101 tcaattca-aaatgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattat 199  Q
    |||  ||  |||||||||||||| |  |  |||| |||| ||||||||||        ||||| |||| |  ||||||||||||| |||| | |||||||    
T  819584 tcacatctcaaatgtttctacactctaaccggtaattcattaataacggt--------aaaatatcactagtggtcactaaacggtaaaaccataattat 819493  T
Q  200 tactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  819492 tactctagtaacttagtaaaacaacggttctcactaatcactaaaagtaattctcaccaaaa 819431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 16732666 - 16732928
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  | ||||||||| ||||||||| | || ||||||||||| || || |||||| ||||||||||||       
T  16732666 aaatgaaagtgtgaggaaatttcctctaagacaaggtttttatagcaagtccccctgatgggcctaactctaaagcttaatggatttaacccatttcaac 16732765  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggttaaac---ggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    |||| || |||||||||||| || || || |||| | ||||||||||||| |||    ||||||||   ||||||||||||||||||| |||| ||||||    
T  16732766 tcaaatctaaaatgtttctatacacacaacggtaat-cactaataacggtcaaataatggtaaaatactaccaacggtcactaaacggtaaaaccttaat 16732864  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    | |||||||| |||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  16732865 t-ttactctaataacttagtaaaacaacggttctcactaatcactaaaagtaattctcaccaaaa 16732928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 30458400 - 30458624
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| |||||| ||||||| |||||||| ||| | ||||||||||||||| ||||||| ||    
T  30458400 aatgaaagtgtgaggaaatttctcataagtgtaggtttttataccaagtctccttaatgggcctaaccctcca-ctcaatggacttaactcatttctatt 30458498  T
Q  102 caattca-aaatgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatt 200  Q
    ||  ||  ||||| |||||||| |  || |||| |||||||||||||        ||||||| |||| |||||||||||||||| |||||||||||| ||    
T  30458499 cacatcttaaatgcttctacactct-aacggtaattcactaataacg--------gtaaaatatcactaacggtcactaaacggtaaaatcttaatt-tt 30458588  T
Q  201 actctagtaacttagtaaaacaacgattctcactaa 236  Q
    |||||||||||||||||||||||| |||||||||||    
T  30458589 actctagtaacttagtaaaacaactattctcactaa 30458624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 262
Target Start/End: Original strand, 34395758 - 34396016
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttcaa 104  Q
    ||||||||||| ||||| |||||||||||| |||||||||  ||||| ||||| | |||||||| ||| | || |||||||||||||||||||| ||||     
T  34395758 gaaagtgtgagtaaatt-ctcataagagtaggtttttatactaagtctccttattgggcctaaccctcca-cttaatggacttaacccatttctattcac 34395855  T
Q  105 ttca-aaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatt 200  Q
     ||  ||||||||||| || |  |  |||| || |||||||||||| ||   |||||||||||||||||| ||||||||||||| ||||||||| || ||    
T  34395856 atctcaaatgtttctatactctaaccggtaattaactaataacggtcaagtaacggtaaaatgtcaccaatggtcactaaacggtaaaatcttagtt-tt 34395954  T
Q  201 actctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    |||||||||||||||||||| ||| |||||||||| ||  |||||||||||| |||||||||    
T  34395955 actctagtaacttagtaaaataactattctcactactcactaaaagtaattcccaccaaaat 34396016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 262
Target Start/End: Complemental strand, 53907461 - 53907201
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||||||||||||||||| || |||||||||| ||    ||| |   | | |||||||| ||||| || |||||||||||||||||||||||    
T  53907461 aatgaaagtgtgaggaaatttctcatgagtgtatgtttttgtagtgtgtctcacaattgggcctaaccctcaa-cttaatggacttaacccatttctttt 53907363  T
Q  102 caattcaaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatta 198  Q
    |||  |||||||||||||||| |  || | ||||| ||||||||||||  |   |||||||| |||||| |||||||||||||||| |||| |||| ||     
T  53907362 caaaccaaaatgtttctacactccaaacgatatttaactaataacggtcgagtaacggtaaattgtcactaacggtcactaaacggtaaaaccttagtt- 53907264  T
Q  199 ttactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
     ||||||||||||||||||||| ||  |||||||||||||  |||||||||||| |||||||||    
T  53907263 -tactctagtaacttagtaaaataaatattctcactaatcactaaaagtaattcccaccaaaat 53907201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 8872225 - 8871964
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||||||||||||||||| |||||||| |||| ||  ||||| ||||| | |||||||| ||| | || |||||||||||||||||| | ||    
T  8872225 aatgaaagtgtgaggaaatttctcatgagagtatgattttgtactaagtctccttattgggcctaaccctcca-cttaatggacttaacccatttatatt 8872127  T
Q  102 caattcaaaa-tgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    |||  ||||| ||||||||||| | ||  | || ||  ||||||||||||||   |||||| |||||||| ||||||||| |||||| ||||||||| ||    
T  8872126 caaaccaaaaatgtttctacactctgaccgataattagctaataacggttaagtaacggtagaatgtcactaacggtcaccaaacggtaaaatcttagtt 8872027  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
     ||||||||| |||||||||||| ||| |||  ||||||||  |||||||||||||||||||||    
T  8872026 -ttactctagcaacttagtaaaataactatttccactaatcactaaaagtaattctcaccaaaa 8871964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 21959217 - 21959004
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||| ||||||||||||  ||| |||||||||||||||||||| |    
T  21959217 aaatgaaagtgtgagaaaatttctcataagactaggtttttatatcaagtccccttaatgggcctaactctc-cacttaatggacttaacccatttctat 21959119  T
Q  101 tc-aattcaaaatgtttctacacccagaatggtatttcactaataacggt---taaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    || |||  ||||||||||||| | || || |||| |||||||||||| ||     ||||||||||  ||||||| |||||||||| || ||||| | | |    
T  21959118 tcaaataaaaaatgtttctacccacacaacggtaattcactaataacagtcgaataacggtaaaacatcaccaatggtcactaaatggtaaaatatcact 21959019  T
Q  197 tattactctagtaac 211  Q
    |||||||||||||||    
T  21959018 tattactctagtaac 21959004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 61 - 261
Target Start/End: Complemental strand, 23269627 - 23269425
Alignment:
Q  61 ggcctaactctcaaactcaatggacttaacccatttcttttcaattca-aaatgtttctacacccagaatggtatttcactaataacggttaa---acgg 156  Q
    |||||||| ||||| || |||||||||||||||||||| ||||  ||  |||||||||||||| |  |  |||| ||||||||||||||| ||   ||||    
T  23269627 ggcctaaccctcaa-cttaatggacttaacccatttctattcacatctcaaatgtttctacactccaatcggtaattcactaataacggtcaagtaacgg 23269529  T
Q  157 taaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcac 256  Q
    |||||| |||| |||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| | ||| ||||||||  ||||||||||||||||    
T  23269528 taaaatatcactaacggtcactaaacggtaaaatcttaatt-ttactctcgtaacttagtaaaacaatggttcccactaatcactaaaagtaattctcac 23269430  T
Q  257 caaaa 261  Q
    |||||    
T  23269429 caaaa 23269425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 45458608 - 45458355
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||| ||||||||||   |||||  | |||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||       
T  45458608 aaatgaaagtgtaaggaaatttcctctaagacaaggtttttatatcaagtccccttaatgggcctaactctcaaacttaatggatttaacccatttcaac 45458509  T
Q  101 tcaattcaaaatgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatta-t 199  Q
    ||| |  ||||  ||| ||||| || |  |||| |||||||||        ||||||||||| ||| |||||| |||||||||| |||| |||||||| |    
T  45458508 tcactctaaaacatttatacacacacagcggtaattcactaat--------aacggtaaaatatcatcaacggccactaaacggtaaaaccttaattatt 45458417  T
Q  200 tactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||| |||||||| |||||||||| | ||||||||||||  || |||||||  |||||||||    
T  45458416 tactatagtaactcagtaaaacaatggttctcactaatcactagaagtaatcatcaccaaaa 45458355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 44056465 - 44056632
Alignment:
Q  57 aataggcctaactctcaaactcaatggacttaacccatttcttttcaattca-aaatgtttctacacccagaatggtatttcactaataacggttaa--- 152  Q
    |||||||||||| ||||| || |||||||||||||||||||| ||||| ||| |||||||||||||| || || |||||||||||||||||||| ||       
T  44056465 aataggcctaaccctcaa-cttaatggacttaacccatttctattcaaatcacaaatgtttctacacacacaacggtatttcactaataacggtcaatta 44056563  T
Q  153 acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaac 221  Q
    ||||| |||  ||||||||||||||||||||| ||||| | ||||||||||||||| |||  |||||||    
T  44056564 acggtgaaacatcaccaacggtcactaaacggtaaaatatcaattattactctagtcactcggtaaaac 44056632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 54117886 - 54117777
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||| |||||||||||||||||||||| ||| |||||||||||||  |||||||||||    
T  54117886 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaatt-ttactctagtaacttagtaaaataactattctcactaatcactaaaagtaatt 54117788  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  54117787 cccaccaaaat 54117777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 5682134 - 5682026
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||| |||||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  5682134 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaatt-ttactctagtaacttaatgaaataactattctcactaatcactaaaagtaatt 5682036  T
Q  252 ctcaccaaaa 261  Q
    ||||||||||    
T  5682035 ctcaccaaaa 5682026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 81 - 261
Target Start/End: Complemental strand, 55376280 - 55376098
Alignment:
Q  81 tggacttaacccatttcttttcaattcaaaa-tgtttctacacccagaatggtatttcactaataacggttaa--acggtaaaatgtcaccaacggtcac 177  Q
    |||||||||| ||||||| |||||  ||||| ||||||||||| |  |  || | ||||||||||||||||||  ||||||| ||||||| |||||||||    
T  55376280 tggacttaactcatttctattcaaaccaaaaatgtttctacactctaaccggcaattcactaataacggttaattacggtaagatgtcactaacggtcac 55376181  T
Q  178 taaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||| ||||||| |||| |||||||||||||||| | ||| ||| |||||| ||||||  ||||||||| |||||||||||    
T  55376180 taaacggtaaaatctcaatt-ttactctagtaacttaatgaaataactattctctctaatcactaaaagtaactctcaccaaaa 55376098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 53704352 - 53704243
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||| ||||||||||| ||||||| |||| |||||||||||||||||||||| | | |||||||||||||  |||||||||||    
T  53704352 aacggtaaaatgtcactaacgatcactaaacggtaaaatctcaatt-ttactctagtaacttagtaaaatagctattctcactaatcactaaaagtaatt 53704254  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  53704253 cccaccaaaat 53704243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 25118801 - 25118693
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| ||||||||||| |  |||||||||||    
T  25118801 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactattctcactaaacactaaaagtaatt 25118704  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  25118703 cccaccaaaat 25118693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 12836953 - 12836852
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    ||||||||||||||||||||||||||||||||| |||||||||  ||||| ||||| | |||||||| |||  ||| |||||||||||||||||||| ||    
T  12836953 aatgaaagtgtgaggaaatttctcataagagtaggtttttatactaagtctccttattgggcctaaccctc-cacttaatggacttaacccatttctatt 12836855  T
Q  102 caa 104  Q
    |||    
T  12836854 caa 12836852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 154 - 252
Target Start/End: Original strand, 122511 - 122607
Alignment:
Q  154 cggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattc 252  Q
    |||||||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| |||||||||||||  ||||||||||||    
T  122511 cggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactattctcactaatcactaaaagtaattc 122607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 30232247 - 30232126
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    ||||||||||||||||||||||||||||||| || |||||| ||  ||||||| | ||| |||||||| ||| |||| |||||||||||||||||| | |    
T  30232247 aaatgaaagtgtgaggaaatttctcataagactaggtttttgtagtaagtcccataaatgggcctaaccctc-aacttaatggacttaacccatttttat 30232149  T
Q  101 tcaattc-aaaatgtttctacac 122  Q
    ||||  | |||||||||||||||    
T  30232148 tcaaaccaaaaatgtttctacac 30232126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 18293141 - 18293034
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||| |||||||| |||||||||||||||| ||||||| |||  |||||||||||| ||| | ||| ||| ||||||||||| |  |||||||||||    
T  18293141 aacggtataatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaaattaatgaaataactattctcactaaacactaaaagtaatt 18293044  T
Q  252 ctcaccaaaa 261  Q
    | ||||||||    
T  18293043 cccaccaaaa 18293034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 19021098 - 19021207
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||||||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||| |  ||||| |||||    
T  19021098 aacggtaaaatataaccaacggtcactaaacggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaaacattaaaaataatt 19021196  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  19021197 ctcaccaaaat 19021207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 30232081 - 30232012
Alignment:
Q  192 ttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    ||||| |||||||||||||||    
T  30232081 ttaattattactctagtaacttagtaaaacaacggttctcactaaatactaaaaataattctcaccaaaa 30232012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 18494079 - 18493947
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    ||||||||||||| |||||||||   |||||  | |||||||||  | ||||||| ||| |||||||| || || || |||||||||||||||||||| |    
T  18494079 aaatgaaagtgtgtggaaatttcctctaagacaaggtttttataggatgtcccctaaatgggcctaaccct-aaccttaatggacttaacccatttctat 18493981  T
Q  101 tcaattc-aaaatgtttctacacccagaatggta 133  Q
    |||| || ||||||||||||||| || |||||||    
T  18493980 tcaaatctaaaatgtttctacacacacaatggta 18493947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 9795839 - 9795948
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||||||| |||| | |||| | ||| ||||| ||||||||||| || | ||||||||||    ||||| |||||    
T  9795839 aacggtaaaatataaccaacggtcactaaacggtaaaaac-taatcactacactagtcacttagtaaaataagggttctcactaaatattaaaaataatt 9795937  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  9795938 ctcaccaaaat 9795948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 262
Target Start/End: Complemental strand, 14499831 - 14499726
Alignment:
Q  156 gtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctca 255  Q
    ||||||| | |||||| |||||||||||| ||||  ||||||| ||| ||||||||||||||||| || | |||||||||| |  ||||| |||||| ||    
T  14499831 gtaaaatataaccaacagtcactaaacggtaaaaa-ttaattactacactagtaacttagtaaaataatggttctcactaaccactaaaaataattcaca 14499733  T
Q  256 ccaaaat 262  Q
    |||||||    
T  14499732 ccaaaat 14499726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 252
Target Start/End: Original strand, 13247060 - 13247136
Alignment:
Q  174 tcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattc 252  Q
    ||||||||||| ||||||| ||||  ||||||||||||||| | ||| ||| |||||||||||||  ||||||||||||    
T  13247060 tcactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaattc 13247136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 12836777 - 12836719
Alignment:
Q  199 ttactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcacc 257  Q
    ||||| ||||||||||||||||| || ||||||||||| |  |||||||||||||||||    
T  12836777 ttactttagtaacttagtaaaactaccattctcactaaccactaaaagtaattctcacc 12836719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 15293995 - 15293888
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | |||||||||||  ||  || |||||    
T  15293995 aacggtaaaatgtaaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaat-tattcaaataatt 15293899  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  15293898 ctcaccaaaat 15293888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 18169585 - 18169692
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||| ||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  18169585 aacggtaaaatataaccaacggtcactaa-cggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 18169681  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  18169682 ctcaccaaaat 18169692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 18248813 - 18248921
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||| | | ||||||||||||||||||| |||| | |||| | ||| ||||||||||||||||| || | ||||||| |||  || ||| |||||    
T  18248813 aacggtaaattataaccaacggtcactaaacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcaccaat-tattaaaataatt 18248910  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  18248911 ctcaccaaaat 18248921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 22351705 - 22351598
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | ||||||| |||  || ||| |||||    
T  22351705 aacggtaaaatgtaaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcaccaat-tattaaaataatt 22351609  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  22351608 ctcaccaaaat 22351598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 262
Target Start/End: Complemental strand, 18493717 - 18493624
Alignment:
Q  169 aacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    |||||||||| ||||| | |||  |||||| ||||||||||||||||||||| |||| | ||||||||    ||||| |||| |||||||||||    
T  18493717 aacggtcacttaacggtagaatactaattactactctagtaacttagtaaaataacggtcctcactaaatactaaaaataatcctcaccaaaat 18493624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 262
Target Start/End: Complemental strand, 15286883 - 15286779
Alignment:
Q  155 ggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctc 254  Q
    |||||||||| ||||||||||||||| ||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||||  ||  || ||||||||    
T  15286883 ggtaaaatgtaaccaacggtcactaa-cggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaat-tattcaaataattctc 15286787  T
Q  255 accaaaat 262  Q
    ||||||||    
T  15286786 accaaaat 15286779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 10644827 - 10644911
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatc 238  Q
    ||||||||||| | ||||||||||||||| ||| |||| || ||| | ||| ||||||||||||||||| || | ||||||||||||    
T  10644827 aacggtaaaatataaccaacggtcactaa-cggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaatc 10644911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 27954655 - 27954762
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | | ||||| |||  |||||| |||||    
T  27954655 aacggtaaaatataaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggtcctcaccaattaataaaa-taatt 27954751  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  27954752 ctcaccaaaat 27954762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 37956595 - 37956529
Alignment:
Q  193 taattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaa 259  Q
    |||||||||| |||||||||||| |||| || | |||||||||| |  ||||| |||||||||||||    
T  37956595 taattattaccctagtaacttagcaaaataatggttctcactaaacactaaaaataattctcaccaa 37956529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 262
Target Start/End: Complemental strand, 47534659 - 47534566
Alignment:
Q  168 caacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    |||| |||||||||||| |||||  |||| | ||| |||||||||||| |||| || | |||||||||| |  ||||| ||||||||||||||||    
T  47534659 caacagtcactaaacggtaaaatactaatgactacactagtaacttagcaaaataatggttctcactaaacactaaaa-taattctcaccaaaat 47534566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 13809074 - 13809021
Alignment:
Q  208 taacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||| |||| |||| |||||||||| |  |||||||||||||||||||||    
T  13809074 taacttagcaaaataacggttctcactaaccactaaaagtaattctcaccaaaa 13809021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 53704491 - 53704458
Alignment:
Q  8 agtgtgaggaaatttctcataagagtatgttttt 41  Q
    ||||||||||||||||||||||| ||||||||||    
T  53704491 agtgtgaggaaatttctcataagtgtatgttttt 53704458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 19697006 - 19696939
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaa 220  Q
    ||||||||||| | ||||||||||| ||||||| |||| | |||| | ||| |||||||||||||||||    
T  19697006 aacggtaaaatataaccaacggtcattaaacggtaaaaac-taatcactacactagtaacttagtaaaa 19696939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 19707591 - 19707524
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaa 220  Q
    ||||||||||| | ||||||||||| ||||||| |||| | |||| | ||| |||||||||||||||||    
T  19707591 aacggtaaaatataaccaacggtcattaaacggtaaaaac-taatcactacactagtaacttagtaaaa 19707524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 52265118 - 52265058
Alignment:
Q  169 aacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattc 229  Q
    |||||||||| ||||| ||||| ||||||| |||  |||||||||||||||| || |||||    
T  52265118 aacggtcacttaacggtaaaatattaattactaccttagtaacttagtaaaataatgattc 52265058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 1e-62; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 261
Target Start/End: Complemental strand, 6146519 - 6146263
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttcaa 104  Q
    |||||||||||||||| |||||| || ||| |||||||||||||||| ||||||| |||||||| ||||| || |||||||||||||||||||| |||||    
T  6146519 gaaagtgtgaggaaatatctcatgagtgtaggtttttatatcaagtctccttaatgggcctaaccctcaa-cttaatggacttaacccatttctattcaa 6146421  T
Q  105 ttcaaaatgtttctacacccagaatggtatttcactaataacggttaaac---ggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatta 201  Q
      |||||||||||||||| |  || |||| | ||||||||||||| ||||   ||||||||||||| |||||||||||||||| ||||||| |||| |||    
T  6146420 accaaaatgtttctacactcc-aacggtaatccactaataacggtcaaacaacggtaaaatgtcactaacggtcactaaacggtaaaatctcaatt-tta 6146323  T
Q  202 ctctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||||||||||||||||| |||||||||| |  |||||||||||||||| ||||    
T  6146322 ctctagtaacttagtaaaacaacggttctcactaaccactaaaagtaattctcacaaaaa 6146263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 6 - 261
Target Start/End: Original strand, 54424510 - 54424767
Alignment:
Q  6 aaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttca-a 104  Q
    ||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||| ||  |||| |||||||||||||||||||| |||| |    
T  54424510 aaagtgtgaggaaatttctcataagtgtaggtttttataccaagtccccttaatgggcctaac-cttcaacttaatggacttaacccatttctattcaca 54424608  T
Q  105 ttcaaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatta 201  Q
    |  ||||||||||||||| |  |  |||| ||||||||||||||| |   ||||||||||| |||| |||||||||||||||| |||||||||||| |||    
T  54424609 tctaaaatgtttctacactctaatcggtaattcactaataacggtcaaataacggtaaaatatcactaacggtcactaaacggtaaaatcttaatt-tta 54424707  T
Q  202 ctctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||||| |||||||| |||| ||||| ||||| |  |||||||||||||||||||||    
T  54424708 ctctagtaatttagtaaaccaactattcttactaaccactaaaagtaattctcaccaaaa 54424767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 261
Target Start/End: Complemental strand, 6154081 - 6153825
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttcaa 104  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| || ||||| ||||| || |||| ||||||| ||||||| |||||    
T  6154081 gaaagtgtgaggaaatttctcataagtgtaggtttttatatcaagtctccttaatgggtctaaccctcaa-cttaatgaacttaactcatttctattcaa 6153983  T
Q  105 ttcaaaatgtttctacacccagaatggtatttcactaataacggttaaac---ggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatta 201  Q
      ||||||||||| || | |  || |||||| ||||||||||||| ||||   ||||||||||||| |||||||||||||||  ||||||| |||| |||    
T  6153982 accaaaatgtttccaccctcc-aacggtattccactaataacggtcaaacaacggtaaaatgtcactaacggtcactaaacgataaaatctcaatt-tta 6153885  T
Q  202 ctctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||| |||||||||||||||||| |||||||||| |  |||||||||||||||||||||    
T  6153884 ctctattaacttagtaaaacaacggttctcactaagcactaaaagtaattctcaccaaaa 6153825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 259
Target Start/End: Complemental strand, 16181697 - 16181442
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttcaa 104  Q
    ||||||||||||||||| ||||||||||||  |||||||| |||||||||||| | |||||||| ||| | || |||||||||||||||||||| || ||    
T  16181697 gaaagtgtgaggaaatt-ctcataagagtagatttttataccaagtccccttattgggcctaaccctcta-cttaatggacttaacccatttctattaaa 16181600  T
Q  105 ttcaaaa-tgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatt 200  Q
     |||||| |||||||||||    |  | || ||||||||||||||| ||   ||||||||||||||| |||||||||||||||| |||||||||||| ||    
T  16181599 atcaaaaatgtttctacactataaccgataattcactaataacggtcaagtaacggtaaaatgtcactaacggtcactaaacggtaaaatcttaatt-tt 16181501  T
Q  201 actctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaa 259  Q
    |||||||||||||||||| |||||| ||||||||||||  |||||  ||||||||||||    
T  16181500 actctagtaacttagtaagacaacggttctcactaatcactaaaaacaattctcaccaa 16181442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 13818005 - 13818266
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    ||||||||||||||||||||||||||||| |||||||||| ||    ||| |   | | |||||||| ||||| || |||||||||||||||||||| ||    
T  13818005 aatgaaagtgtgaggaaatttctcataagtgtatgtttttgtagtgtgtctcacaattgggcctaaccctcaa-cttaatggacttaacccatttctatt 13818103  T
Q  102 caattcaaaa-tgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    |||  ||||| ||||||||||| |  | ||||| ||||||||||||||| ||   ||||||||||||||| ||| |||||||||||| ||||||||| ||    
T  13818104 caaaccaaaaatgtttctacactctaactggtaattcactaataacggtcaagtaacggtaaaatgtcactaacagtcactaaacggtaaaatcttagtt 13818203  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
     ||||||||||||||||| |||| ||| |||||||||||||  |||||||||||| ||||||||    
T  13818204 -ttactctagtaacttaggaaaataactattctcactaatcactaaaagtaattcccaccaaaa 13818266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 19570443 - 19570182
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||||||||||||||||||||||| ||||| ||||    ||| |   | | ||| |||| ||||| || |||||||||||||||||||| ||    
T  19570443 aatgaaagtgtgaggaaatttctcataagagtgtgtttatatagtgtgtctcacaattgggcataaccctcaa-cttaatggacttaacccatttctatt 19570345  T
Q  102 caattcaaaa-tgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    |||  ||||| ||||||||||| |  |  |||| |||||||||||| || ||   ||||||||||||||| |||||||||||||||| ||||||||| ||    
T  19570344 caaaccaaaaatgtttctacactctaaccggtaattcactaataacagtcaagtaacggtaaaatgtcactaacggtcactaaacggtaaaatcttagtt 19570245  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
     ||||||||||||||||||||||||||| ||||||||||||  |||||||||||||| ||||||    
T  19570244 -ttactctagtaacttagtaaaacaacggttctcactaatcactaaaagtaattctcgccaaaa 19570182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 17101831 - 17102090
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||||||||||| |||||||||||| |||||||||  ||||| ||||| | |||||||| ||||| ||  ||||||||||||||||||| ||    
T  17101831 aatgaaagtgtgaggaaatt-ctcataagagtaggtttttatactaagtctccttattgggcctaaccctcaa-cttgatggacttaacccatttctatt 17101928  T
Q  102 caattcaaaatg-tttctacacccagaatggtatttcactaataacggttaaa---cggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    ||| ||| |||  ||||||||| || |  | |||||||||||||||||| |||   ||||||||  |||||||||| |||||||||| |||||  ||||     
T  17101929 caaatcacaattatttctacacacacac-gatatttcactaataacggtcaaataacggtaaaacatcaccaacggccactaaacggtaaaatgctaatg 17102027  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
     ||||||| ||||||||||||||||||| |||||||||||   |||||||||||||||||||||    
T  17102028 -ttactcttgtaacttagtaaaacaacggttctcactaatgactaaaagtaattctcaccaaaa 17102090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 50111803 - 50111561
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||| ||||||||||||  ||| ||||||||||||||| |||| |    
T  50111803 aaatgaaagtgtgaggaaatttctcataagaccaggtttttatatcaagttcccttaatgggcctaactctc-tacttaatggacttaacccaattctat 50111705  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatta- 198  Q
    |||| || ||||||||||||||| || || |||| |||||||||        ||||||||||| |||||||||||           |||| ||||||||     
T  50111704 tcaaatcaaaaatgtttctacacacacaacggtaattcactaat--------aacggtaaaatatcaccaacggt-----------aaaaccttaattat 50111624  T
Q  199 ttactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||| |||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  50111623 ttaccctagtaacatagtaaaacaacggttctcactaatcactaaaagtaattctcaccaaaa 50111561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 14295932 - 14296195
Alignment:
Q  1 aaatgaaagtgtgaggaaattt-ctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctt 99  Q
    |||||||||||||||||||||| ||| |||||  | |||||||||  | ||||||||||| |||||||| || || || | |||| |||||||||| |      
T  14295932 aaatgaaagtgtgaggaaattttctc-taagacaaggtttttatagtatgtccccttaatgggcctaaccctaaagcttagtggatttaacccattccaa 14296030  T
Q  100 ttcaattcaaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
     |||| || ||||||||||||||  | || ||||  |||||||||||||| ||   ||||||||||   ||||||||| ||||||||| ||||| |||||    
T  14296031 ctcaaatctaaatgtttctacacatacaacggtaaatcactaataacggtcaattaacggtaaaatactaccaacggtaactaaacggtaaaatattaat 14296130  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||| ||||||||||||||||||||| |||||||||| |  ||||| |||||||||||||||    
T  14296131 tattactttagtaacttagtaaaacaacggttctcactaaacagtaaaaataattctcaccaaaa 14296195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 14301559 - 14301822
Alignment:
Q  1 aaatgaaagtgtgaggaaattt-ctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctt 99  Q
    |||||||||||||||||||||| ||| |||||  | |||||||||  | ||||||||||| |||||||| || || || | |||| |||||||||| |      
T  14301559 aaatgaaagtgtgaggaaattttctc-taagacaaggtttttatagtatgtccccttaatgggcctaaccctaaagcttagtggatttaacccattccaa 14301657  T
Q  100 ttcaattcaaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
     |||| || ||||||||||||||  | || ||||  |||||||||||||| ||   ||||||||||   ||||||||| ||||||||| ||||| |||||    
T  14301658 ctcaaatctaaatgtttctacacatacaacggtaaatcactaataacggtcaattaacggtaaaatactaccaacggtaactaaacggtaaaatattaat 14301757  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||| ||||||||||||||||||||| |||||||||| |  ||||| |||||||||||||||    
T  14301758 tattactttagtaacttagtaaaacaacggttctcactaaacagtaaaaataattctcaccaaaa 14301822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 262
Target Start/End: Original strand, 38528224 - 38528482
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttcaa 104  Q
    ||||||||||||||||| |||||||||||| |||||||||  ||||| ||||| | |||||||  ||| | || |||||||||||||||||||| |||||    
T  38528224 gaaagtgtgaggaaatt-ctcataagagtaggtttttatactaagtctccttattgggcctaatcctcca-cttaatggacttaacccatttctattcaa 38528321  T
Q  105 ttcaaaa-tgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatt 200  Q
       |||| ||||||||||| |  |  |||| ||||||||||||||| ||   || |||||| ||||  |||| ||||||||||| ||||||||| || ||    
T  38528322 acaaaaaatgtttctacactctaaccggtaattcactaataacggtcaagtaactgtaaaacgtcattaacgatcactaaacggtaaaatcttagtt-tt 38528420  T
Q  201 actctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    |||||||||||||||||||| ||| |||||||||| ||  |||||||||||| |||||||||    
T  38528421 actctagtaacttagtaaaataactattctcactactcactaaaagtaattcccaccaaaat 38528482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 261
Target Start/End: Original strand, 13836117 - 13836364
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttca- 103  Q
    |||||||||||||||||||||| || |||| ||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||     
T  13836117 gaaagtgtgaggaaatttctcacaatagtaggtttttataccaagtccccttaatgggcctaactctcaaacttaatggacttaacccatttctattcac 13836216  T
Q  104 attcaaaatgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattact 203  Q
    ||   |||||||||||||| |  |  |||| |||| || |||          || |||| |||| | || ||||||||||| || ||||||||| |||||    
T  13836217 atctcaaatgtttctacactctaaccggtaattcattagtaa---------tgttaaatatcactatcgatcactaaacggtaatatcttaatt-ttact 13836306  T
Q  204 ctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||||||||||||||||| ||||||||||  |  ||||||||| | |||||||||    
T  13836307 ctagtaacttagtaaaacaactattctcactagccactaaaagtaactttcaccaaaa 13836364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 11060759 - 11060495
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    ||||||||||||||| |||||||   |||||  | |||||||||  | ||||||| ||| |||||||  || || || | |||| |||||||||| |       
T  11060759 aaatgaaagtgtgagaaaatttcctctaagacaaggtttttatagtatgtcccctgaatgggcctaagcctaaagcttagtggatttaacccattccaac 11060660  T
Q  101 tcaattcaaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    |||| || |||||||||||||| |  || ||||  |||||||||||| | ||   |||||||||| | ||||||||||||||||||| ||||| ||||||    
T  11060659 tcaaatctaaatgtttctacacacccaacggtaaatcactaataacgatcaattaacggtaaaattttaccaacggtcactaaacggtaaaatattaatt 11060560  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    | ||||||||||||||||||||| |||| |||||||||| |  ||||| ||||||||||||||||    
T  11060559 actactctagtaacttagtaaaataacggttctcactaaacactaaaaataattctcaccaaaat 11060495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 221
Target Start/End: Original strand, 14304541 - 14304762
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||| |||||||||   |||||  | ||||||||  |||||||||||||| ||||||||||||||||| |||||| ||||||||||||   |    
T  14304541 aatgaaagtgtgtggaaatttcctctaagacaaggtttttat--caagtccccttaatgggcctaactctcaaacttaatggatttaacccatttcaact 14304638  T
Q  102 caattc-aaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    ||  || ||||||||||||||| || || |  | ||||||||||||||||||   ||| |||||| |||||||| |||||||||||| |||||  |||||    
T  14304639 cacatctaaaatgtttctacacacacaacgacaattcactaataacggttaattaacgataaaatatcaccaacagtcactaaacggtaaaatactaatt 14304738  T
Q  198 attactctagtaacttagtaaaac 221  Q
    |||||||||||||||  |||||||    
T  14304739 attactctagtaactcggtaaaac 14304762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 34438951 - 34438843
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| |||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||| || ||||||||||||  |||||||||||    
T  34438951 aacggtaaaatatcactaacggtcactaaacggtaaaatcttaatt-ttactctagtaacttagtaaaacatcggttctcactaatcactaaaagtaatt 34438853  T
Q  252 ctcaccaaaa 261  Q
    ||||||||||    
T  34438852 ctcaccaaaa 34438843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 2 - 211
Target Start/End: Original strand, 35124192 - 35124404
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||| ||||||||||||||||| || | |||||||  | ||| | ||||| |||||||| ||||| || |||||||||||||||||||| ||    
T  35124192 aatgaaagtgtgtggaaatttctcataagactaggcttttatagtatgtctcattaatgggcctaaccctcaa-cttaatggacttaacccatttctgtt 35124290  T
Q  102 caattcaaaa-tgtttctacacccagaatggtatttcactaataacggttaaa---cggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    ||| |||||| ||||||||| | || || |||| |||| |||||||||| |||   ||||||||  |||| |||||||||||||||| ||||| | ||||    
T  35124291 caaatcaaaaatgtttctacccacacaacggtaattcattaataacggtcaaataacggtaaaacatcacaaacggtcactaaacggtaaaatatcaatt 35124390  T
Q  198 attactctagtaac 211  Q
    |||||| |||||||    
T  35124391 attactttagtaac 35124404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 261
Target Start/End: Complemental strand, 317259 - 317001
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatc-aagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttca 103  Q
    ||||||||||||||||| | |||||||||| ||||||||| | |||||  |||| | |||||| | ||| | || ||||||||||||| |||||| ||||    
T  317259 gaaagtgtgaggaaattcc-cataagagtaggtttttatacctaagtcttcttattgggcctacccctcca-cttaatggacttaacctatttctattca 317162  T
Q  104 attca-aaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattat 199  Q
      ||  ||||||||||| || |  |  |||| || |||||||||||| ||   ||||||||||||||| |||||||||||||||| ||||||||| || |    
T  317161 catctcaaatgtttctatactctaaccggtaattaactaataacggtcaagtaacggtaaaatgtcactaacggtcactaaacggtaaaatcttagtt-t 317063  T
Q  200 tactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||| |||||||||||||||| ||| ||| |||||||||  |||||||||||| ||||||||    
T  317062 tactatagtaacttagtaaaataactattatcactaatcactaaaagtaattcccaccaaaa 317001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 30207713 - 30207928
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||| |||||||||||||||| ||| ||||||||| |||||||||||||| |||||||||||| |||| |  | ||||||||||||||| ||    
T  30207713 aatgaaagtgtgtggaaatttctcataagtgtaggtttttataccaagtccccttaatgggcctaactctc-aacttatagaacttaacccatttctatt 30207811  T
Q  102 ca-attcaaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    || ||   |||||||||||||| |  || |||| |||||||| |||||| |   ||||||||||| ||| ||| ||||||| ||||| ||||| |||||     
T  30207812 cacatctcaaatgtttctacactc-taacggtaattcactaacaacggtcaaataacggtaaaatatcaacaatggtcacttaacggtaaaatattaatg 30207910  T
Q  198 attactctagtaacttag 215  Q
    | ||| ||||||||||||    
T  30207911 actaccctagtaacttag 30207928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 211
Target Start/End: Complemental strand, 53898345 - 53898133
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||| ||||||||||||||||| || |||||||||  ||| | | | ||| ||| |||| ||| |||| |||||||||||||||||||| ||    
T  53898345 aatgaaagtgtgtggaaatttctcataagattaggtttttatagtaagcctcataaatgggcataaccctc-aacttaatggacttaacccatttctatt 53898247  T
Q  102 caattc-aaaatgtttctacacccagaatggtatttcactaataacggt---taaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    ||| || ||||||||||||| | || || |||| ||||||||||| |||     ||||||||||  ||||||||||||||||||||  ||||| | ||||    
T  53898246 caaatcaaaaatgtttctacccacacaacggtaattcactaataatggtcgaataacggtaaaacatcaccaacggtcactaaacgataaaatatcaatt 53898147  T
Q  198 attactctagtaac 211  Q
    ||||||||||||||    
T  53898146 attactctagtaac 53898133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 14527832 - 14527568
Alignment:
Q  1 aaatgaaagtgtgaggaaattt-ctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctt 99  Q
    |||||||||||||||||||||| ||| |||||  | | |||||||  ||||||||||||||||||||||| | || || |||||| |||||||||| |      
T  14527832 aaatgaaagtgtgaggaaattttctc-taagacaaggcttttatagtaagtccccttaataggcctaactataaagcttaatggatttaacccattccaa 14527734  T
Q  100 ttcaattc-aaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaa 195  Q
     | ||||| ||||||||||||||| |  || |  |  |||||||||||||| |   ||||||||||| ||||||||| ||||||| ||| ||||| ||||    
T  14527733 cttaattctaaaatgtttctacacactcaacgacaaatcactaataacggtcacataacggtaaaatatcaccaacgatcactaatcggtaaaatattaa 14527634  T
Q  196 ttattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
     |  || |||||||||||||| |||| ||| ||||||||||    |||||||||||||||||||||    
T  14527633 cttctaatctagtaacttagttaaacgacggttctcactaaatactaaaagtaattctcaccaaaa 14527568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 15856881 - 15856772
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| ||||||| |||||| | ||||||| |||| |||||||||||||||||||||| ||| |||||||||||||  |||||||||||    
T  15856881 aacggtaaaatgtcactaacggtcgctaaacagtaaaatctcaatt-ttactctagtaacttagtaaaataactattctcactaatcactaaaagtaatt 15856783  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  15856782 cccaccaaaat 15856772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 28558810 - 28558917
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||||  ||||||||||||||| |||||| ||| ||||||||||||  |||||||||||    
T  28558810 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaatt--tactctagtaacttaataaaaccacggttctcactaatcactaaaagtaatt 28558907  T
Q  252 ctcaccaaaa 261  Q
    | ||||||||    
T  28558908 cccaccaaaa 28558917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 40939621 - 40939860
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  | |||||||||  ||||||||||||| ||||||||||| || || |||||| |||||||||  |       
T  40939621 aaatgaaagtgtgaggaaatttcatctaagacaaggtttttatagtaagtccccttaatgggcctaactctaaagcttaatggatttaacccatcccaac 40939720  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggt---taaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    |||| || ||||| |||||| || || || |||| |||||||||||||||   | |||||||||||   ||||||||||||||||||| | |||  ||||    
T  40939721 tcaactctaaaatatttctatacacacaacggtaattcactaataacggtcaattaacggtaaaatactaccaacggtcactaaacggtataatactaat 40939820  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaa 236  Q
     | |||||| |||||||||||||| |||| || |||||||    
T  40939821 cactactctggtaacttagtaaaataacggttttcactaa 40939860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 152 - 260
Target Start/End: Complemental strand, 17912116 - 17912010
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||| ||  ||||||| | || |||||||||||||||||||||| ||| |||||||||||||  |||||||||||    
T  17912116 aacggtaaaatgtcactaacggtcactaa-cgataaaatctaagtt-ttactctagtaacttagtaaaataactattctcactaatcactaaaagtaatt 17912019  T
Q  252 ctcaccaaa 260  Q
    |||||||||    
T  17912018 ctcaccaaa 17912010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 19260467 - 19260359
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  19260467 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactattctcactaatcactaaaagtaatt 19260370  T
Q  252 ctcaccaaaat 262  Q
    | ||| |||||    
T  19260369 cccactaaaat 19260359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 2844828 - 2844934
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| |  || ||| |||||||||||||| |||||||||||    
T  2844828 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaat-gaataactattctcactaatcgctaaaagtaatt 2844924  T
Q  252 ctcaccaaaa 261  Q
    | ||||||||    
T  2844925 cccaccaaaa 2844934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 12029810 - 12029707
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||  ||||||| ||||  ||||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  12029810 aacggtaaaatgtcactaacggtcactaaacgataaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaatt 12029713  T
Q  252 ctcacc 257  Q
    ||||||    
T  12029712 ctcacc 12029707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 45582251 - 45582354
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  ||||| |||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  45582251 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactatagtaacttaatgaaataactattctcactaatcactaaaagtaatt 45582348  T
Q  252 ctcacc 257  Q
    ||||||    
T  45582349 ctcacc 45582354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 19232407 - 19232515
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| ||||||||||||| || ||||||| ||||  ||||||||||||||| | ||| ||| ||||||||||| |  |||||||||||    
T  19232407 aacggtaaaatgtcactaacggtcactaaatggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaaacactaaaagtaatt 19232504  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  19232505 cccaccaaaat 19232515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 3993188 - 3993295
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| ||| |||||||||| | ||||||| ||||  ||||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  3993188 aacggtaaaatgtcactaacagtcactaaacagtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaatt 3993285  T
Q  252 ctcaccaaaa 261  Q
    | ||||||||    
T  3993286 cacaccaaaa 3993295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 33342515 - 33342622
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||| ||||||||||| ||||||| ||||  ||||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  33342515 aacggtaaaatgtcactaacgatcactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatccttaaaagtaatt 33342612  T
Q  252 ctcaccaaaa 261  Q
    |  |||||||    
T  33342613 cctaccaaaa 33342622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 54684933 - 54684826
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||  |||||||||||||||| ||||||| ||||  ||||||||||||||| | ||| ||  |||||||||||||  |||||||||||    
T  54684933 aacggtaaaatgtcattaacggtcactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataattattctcactaatcactaaaagtaatt 54684836  T
Q  252 ctcaccaaaa 261  Q
    | ||||||||    
T  54684835 cccaccaaaa 54684826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 261
Target Start/End: Original strand, 48422220 - 48422309
Alignment:
Q  172 ggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||| ||||| ||||| ||||||| ||| ||||||||||||||||| |||| |||||||||| |  |||||||||||||||||||||    
T  48422220 ggtcacttaacggtaaaatattaattactaccctagtaacttagtaaaataacggttctcactaaccactaaaagtaattctcaccaaaa 48422309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 51960748 - 51960644
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| ||||||| ||||| || ||||||| || | |||||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  51960748 aacggtaaaatgtcactaacggtctctaaatggtaaaatctcaact-ttactctagtaacttaatgaaataactattctcactaatcactaaaagtaatt 51960650  T
Q  252 ctcacc 257  Q
    ||||||    
T  51960649 ctcacc 51960644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 55513510 - 55513612
Alignment:
Q  153 acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattc 252  Q
    ||||||||||||||| |||||||||||||||| |||| |  ||||  ||||||||||||||| | ||| ||| |||||||||||||  ||||||||||||    
T  55513510 acggtaaaatgtcactaacggtcactaaacggtaaaaccacaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaattc 55513607  T
Q  253 tcacc 257  Q
    |||||    
T  55513608 tcacc 55513612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 261
Target Start/End: Original strand, 19947336 - 19947441
Alignment:
Q  154 cggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattct 253  Q
    |||||||||||| | |||||||||||||||| ||||||| ||||  ||||||||||||||| | ||| ||| |||||||||||||  |||||||||||      
T  19947336 cggtaaaatgtcgctaacggtcactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaatttc 19947433  T
Q  254 caccaaaa 261  Q
    ||||||||    
T  19947434 caccaaaa 19947441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 11476821 - 11476712
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||||||| ||||  ||||| | ||| ||||||||||||||||| || | |||||||||| |  ||||| |||||    
T  11476821 aacggtaaaatataaccaacggtcactaaacggtaaaaa-ttaatcactacactagtaacttagtaaaataatggttctcactaaacattaaaaataatt 11476723  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  11476722 ctcaccaaaat 11476712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 14285598 - 14285707
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||||||| |||| || ||||| ||| || |||||||||||||| || | |||||||||| |  ||||| |||||    
T  14285598 aacggtaaaatataaccaacggtcactaaacggtaaaaact-aattactacactggtaacttagtaaaataatggttctcactaaacactaaaaataatt 14285696  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  14285697 ctcaccaaaat 14285707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 17522642 - 17522379
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  | |||||||||  | ||||||| ||| |||||||| || || || |||||||||||||||||         
T  17522642 aaatgaaagtgtgaggaaatttcctctaagacaaggtttttataggatgtcccctaaatgggcctaaccctaaagcttaatggacttaacccattctaac 17522543  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    |||| || ||||||||| ||||| || || || |  ||||||| |||||| |   |||||||||||   ||||||||||||| ||||| ||||| |||||    
T  17522542 tcaaatctaaaatgtttttacacacataacggcaaatcactaagaacggtcaaataacggtaaaattctaccaacggtcacttaacggtaaaatattaat 17522443  T
Q  197 tattactctagtaacttagt-aaaacaacgattctcactaatcgataaaagtaattctcaccaa 259  Q
    |  ||  ||||||||||||| ||||| ||| ||||||||||    ||||| |||||||||||||    
T  17522442 ttctaacctagtaacttagtaaaaacgacggttctcactaaatactaaaaataattctcaccaa 17522379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 260
Target Start/End: Complemental strand, 12348886 - 12348803
Alignment:
Q  176 actaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaa 260  Q
    ||||||||| ||||||||| || |||||||||||||||||||||| ||| ||||||||||||   |||||||||||| |||||||    
T  12348886 actaaacggtaaaatcttagtt-ttactctagtaacttagtaaaataactattctcactaattactaaaagtaattcccaccaaa 12348803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 12559992 - 12559754
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  | |||||||||  | ||||||||||| || |||||  | || ||   |||||||||||||||||  |    
T  12559992 aaatgaaagtgtgaggaaatttcctctaagacaaggtttttatagtatgtccccttaatgggtctaaccttaaagcttcgtggacttaacccatttccat 12559893  T
Q  101 tcaattcaaaatgtttctacacccagaatggtatttcactaataacgg---ttaaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    |||||  ||||||||  ||||| || || ||||  |||||||||||||   || || ||||||||   ||||||||||||| ||||  |||||   ||||    
T  12559892 tcaatctaaaatgttcatacacacacaacggtaaatcactaataacggtcatttaatggtaaaattctaccaacggtcacttaacgataaaataccaatt 12559793  T
Q  198 attactctagtaacttagta-aaacaacgattctcacta 235  Q
    | |||||||||||||||||| ||| |||| |||||||||    
T  12559792 actactctagtaacttagtataaataacggttctcacta 12559754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 79 - 261
Target Start/End: Original strand, 13839444 - 13839617
Alignment:
Q  79 aatggacttaacccattt-cttttcaattcaaaatgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcac 177  Q
    |||||||||||||||||| || | ||| ||||||||||||||||| |  || |||| || ||||||||||||        |||||||||| || | ||||    
T  13839444 aatggacttaacccatttgctatccaaatcaaaatgtttctacactccaaaaggtaattaactaataacggt--------aaaatgtcactaatgatcac 13839535  T
Q  178 taaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||| ||||| | ||||  ||||||||||||| | | ||| ||| |||||||||||||  |||||||||||| ||||||||    
T  13839536 taaacggtaaaatatcaatt--tactctagtaactaaatgaaataactattctcactaatcactaaaagtaattcccaccaaaa 13839617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 17101146 - 17101239
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttc 97  Q
    |||||||||||||||||||| |||||||||||| |||||||||  ||||| ||||| | |||||||| ||| ||||  ||||||||||||||||||    
T  17101146 aatgaaagtgtgaggaaatt-ctcataagagtaggtttttatactaagtctccttattgggcctaaccctc-aacttgatggacttaacccatttc 17101239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 38168554 - 38168662
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| |||| |||||||||||||||| ||||| | || |  ||||||||||||||||||||| || | |||||||||| |  ||||| |||||    
T  38168554 aacggtaaaatatcactaacggtcactaaacggtaaaatgtcaact--tactctagtaacttagtaaaataatggttctcactaaacactaaaaataatt 38168651  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  38168652 cacaccaaaat 38168662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 2050431 - 2050538
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||| ||| ||||||| |||||||| ||| ||| ||||  ||||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  2050431 aacggtaaaatgccactaacggtcgctaaacggtaaagtctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaatt 2050528  T
Q  252 ctcaccaaaa 261  Q
      ||||||||    
T  2050529 tccaccaaaa 2050538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 16880763 - 16880873
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||   ||||||||||||| ||||| |||||  | |||| ||||||||||||||||||||| |||| ||||||| || |  ||||| |||||    
T  16880763 aacggtaaaatactaccaacggtcacttaacggtaaaatactgattactactctagtaacttagtaaaataacggttctcaccaaaccctaaaaataatt 16880862  T
Q  252 ctcaccaaaat 262  Q
    |||| ||||||    
T  16880863 ctcatcaaaat 16880873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 260
Target Start/End: Original strand, 15879020 - 15879128
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||   | ||| ||||||| ||||| |||||  |||||| ||| |||| ||||||||||||||||| |||||||||| |  ||||| |||||    
T  15879020 aacggtaaaatactagcaatggtcacttaacggtaaaatactaattactaccctaggaacttagtaaaacaacggttctcactaaacactaaaaataatt 15879119  T
Q  252 ctcaccaaa 260  Q
    |||||||||    
T  15879120 ctcaccaaa 15879128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 54037733 - 54037629
Alignment:
Q  155 ggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctc 254  Q
    ||||||||||||| |||||||||||||||  ||||||| |||  |||||||||||||||| | ||| ||| ||| ||| ||| |  |||||||||||| |    
T  54037733 ggtaaaatgtcactaacggtcactaaacgttaaaatctcaat--ttactctagtaacttaatgaaataactattatcaataaacactaaaagtaattccc 54037636  T
Q  255 accaaaa 261  Q
    |||||||    
T  54037635 accaaaa 54037629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 55440611 - 55440434
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  | |||||||||  ||||| ||| ||| ||||||||||| |  || |||||| ||||||||||||       
T  55440611 aaatgaaagtgtgaggaaatttcctctaagacaaggtttttatagtaagtctcctaaatgggcctaactctaaggcttaatggatttaacccatttccac 55440512  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggt 174  Q
    ||||||| ||||||||||||||| || || | ||    |||| |||||||||   ||||||||||| |||||||||||    
T  55440511 tcaattctaaaatgtttctacactcacaacgataaaatactattaacggttacttaacggtaaaatatcaccaacggt 55440434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 5240345 - 5240238
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||  ||| |||||||||||||||| ||||||| |||  |||||| ||||||||| | ||| ||  |||||||||||||  |||||||||||    
T  5240345 aacggtaaaataccactaacggtcactaaacggtaaaatctcaat--ttactcaagtaacttaatgaaataattattctcactaatcactaaaagtaatt 5240248  T
Q  252 ctcaccaaaa 261  Q
    | ||| ||||    
T  5240247 cccactaaaa 5240238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 13954540 - 13954432
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| ||||||||||||||| ||| |||| || ||| | ||| ||||||||||||||||| || | ||||||||||| | |||||| ||||    
T  13954540 aacggtaaaatgtaaccaacggtcactaa-cggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaattgctaaaagcaatt 13954443  T
Q  252 ctcaccaaaat 262  Q
    | ||| |||||    
T  13954442 cccactaaaat 13954432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 16995810 - 16995714
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttca 103  Q
    ||||||||||||||||| |||||||||||| |||||||||  |||||  |||| | |||||||| ||| | || |||||||||||||||||||| ||||    
T  16995810 gaaagtgtgaggaaatt-ctcataagagtaggtttttatactaagtcttcttattgggcctaaccctcca-cttaatggacttaacccatttctattca 16995714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 17205324 - 17205434
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||  || ||| | ||||| || || ||||| ||||||| ||| ||||||||||||||||| || | |||||||||| |  ||||| |||||    
T  17205324 aacggtaaaataccaacaatgatcacttaatggtaaaatattaattactaccctagtaacttagtaaaataatggttctcactaaacactaaaaataatt 17205423  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  17205424 ctcaccaaaat 17205434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 45861418 - 45861526
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| ||||||||||||||| ||| |||| || ||| | ||| ||||||||||||||||| || | ||||||||||| | |||||| ||||    
T  45861418 aacggtaaaatgtaaccaacggtcactaa-cggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaattgctaaaagcaatt 45861515  T
Q  252 ctcaccaaaat 262  Q
    | ||| |||||    
T  45861516 cccactaaaat 45861526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 261
Target Start/End: Original strand, 12032179 - 12032272
Alignment:
Q  168 caacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||| |||||| ||||| |||||  |||||| ||||||||||||||||||||| || | |||||||||| |  ||||| |||||||| ||||||    
T  12032179 caacagtcacttaacggtaaaatactaattactactctagtaacttagtaaaataatggttctcactaaacactaaaaataattctcgccaaaa 12032272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 261
Target Start/End: Complemental strand, 16995661 - 16995581
Alignment:
Q  180 aacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||| ||||||||| || |||||||||||||||||||||| ||| ||| |||| ||||  |||||||||||| ||||||||    
T  16995661 aacggtaaaatcttagtt-ttactctagtaacttagtaaaataactattttcaccaatcactaaaagtaattcccaccaaaa 16995581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 44229600 - 44229712
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacgg--aaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaa 249  Q
    ||||||||| | | |||||||||||||||||||  |||||  ||||| | ||| ||||||||||||||||| || | ||||||||||    ||||| |||    
T  44229600 aacggtaaattataaccaacggtcactaaacggtaaaaaaaattaatcactacactagtaacttagtaaaataagggttctcactaaatattaaaaataa 44229699  T
Q  250 ttctcaccaaaat 262  Q
    |||||||||||||    
T  44229700 ttctcaccaaaat 44229712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 23492994 - 23493077
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaa 236  Q
    ||||||||||| | ||||||||||||||||||| |||| | |||| | ||| ||||||||||||||||| || | ||||||||||    
T  23492994 aacggtaaaatataaccaacggtcactaaacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaa 23493077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 8268373 - 8268266
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| | ||||||||||||| ||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  8268373 aacggtaaaatgtaatcaacggtcactaa-cggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 8268277  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  8268276 ctcaccaaaat 8268266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 8275473 - 8275366
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| | ||||||||||||| ||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  8275473 aacggtaaaatgtaatcaacggtcactaa-cggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 8275377  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  8275376 ctcaccaaaat 8275366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 3576058 - 3575949
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||   | ||||||||||| ||| | |||||  ||||||  || ||||||||||||||||| || | |||||||||| |  ||||| |||||    
T  3576058 aacggtaaaatactaacaacggtcacttaaccgtaaaatactaattacaacactagtaacttagtaaaataatggttctcactaaacactaaaaataatt 3575959  T
Q  252 ctcaccaaaa 261  Q
    ||||||||||    
T  3575958 ctcaccaaaa 3575949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 14058791 - 14058730
Alignment:
Q  201 actctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    |||||||||||||||||||| |||| |||||||||| |  ||||| ||||||||| ||||||    
T  14058791 actctagtaacttagtaaaataacggttctcactaaacactaaaaataattctcatcaaaat 14058730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 9302767 - 9302684
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaa 236  Q
    ||||||||| | | ||||||||||||||||||| |||| | |||| | ||| ||||||||||||||||| || | ||||||||||    
T  9302767 aacggtaaattataaccaacggtcactaaacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaa 9302684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 14842210 - 14842143
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaa 220  Q
    ||||||||||| | ||||||||||||||||||| ||||  ||||| | ||| |||||||||||||||||    
T  14842210 aacggtaaaatataaccaacggtcactaaacggtaaaa-attaatcactacactagtaacttagtaaaa 14842143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 22143901 - 22143826
Alignment:
Q  186 aaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    ||||||||| || |||||||||||||||||||||| ||| ||||||||||||   |||| ||||||  |||||||||    
T  22143901 aaaatcttagtt-ttactctagtaacttagtaaaataactattctcactaattactaaaggtaattgccaccaaaat 22143826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 39657174 - 39657258
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaa 236  Q
    ||||||||||| ||| ||||||||||  ||||| |||||  |||||||||| | |||||||||| |||| || | ||||||||||    
T  39657174 aacggtaaaatatcaacaacggtcacataacggtaaaatactaattattaccccagtaacttagcaaaataatggttctcactaa 39657258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 262
Target Start/End: Complemental strand, 12257447 - 12257343
Alignment:
Q  155 ggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctc 254  Q
    |||||||| | ||||||||||||||| ||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||||  || ||| ||||||||    
T  12257447 ggtaaaatataaccaacggtcactaa-cggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataattctc 12257351  T
Q  255 accaaaat 262  Q
    ||||||||    
T  12257350 accaaaat 12257343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 16821753 - 16821860
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | |||||||||||||||  | ||||||  |||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  16821753 aacggtaaaatataaccaacggtcactaacggtaaaaat--taatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 16821849  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  16821850 cacaccaaaat 16821860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34439094 - 34439051
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttata 44  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||    
T  34439094 aaatgaaagtgtgaggaaatttctcataagtgtaggtttatata 34439051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 16933593 - 16933484
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||| | | ||||||||||||||||||| |||| | |||| |  || ||||||||||||||||| || | |||||||| |    ||||| |||||    
T  16933593 aacggtaaattataaccaacggtcactaaacggtaaaaac-taatcaccacactagtaacttagtaaaataagggttctcacttaatattaaaaataatt 16933495  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  16933494 ctcaccaaaat 16933484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 22144021 - 22143905
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttcaa 104  Q
    ||||||||||||||||| ||||||||||||  ||| ||||  ||||| ||||| | |||||||| ||| |  | |||||| ||||||||||||| |||||    
T  22144021 gaaagtgtgaggaaatt-ctcataagagtagttttgtatactaagtctccttattgggcctaaccctccacat-aatggatttaacccatttctattcaa 22143924  T
Q  105 ttc-aaaatgtttctacac 122  Q
      | |||||||||||||||    
T  22143923 accaaaaatgtttctacac 22143905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8632283 - 8632323
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgttttt 41  Q
    ||||||||||||| |||||||||||||||| ||| ||||||    
T  8632283 aaatgaaagtgtgtggaaatttctcataagtgtaggttttt 8632323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 9590316 - 9590248
Alignment:
Q  193 taattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||| ||| ||||||||||||||||| || | |||||||||| |  ||||| |||| ||||||||||    
T  9590316 taattactacgctagtaacttagtaaaataatggttctcactaaacactaaaactaatcctcaccaaaa 9590248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 12487531 - 12487439
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaaccca 93  Q
    |||||||||||||||||||||||   |||||  | |||| ||||  | ||||||||||| |||||||| || || || | |||||||||||||    
T  12487531 aaatgaaagtgtgaggaaatttcctctaagacaaggtttatataggacgtccccttaatgggcctaaccctaaagcttagtggacttaaccca 12487439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 17192194 - 17192301
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||  || ||||||| ||| ||||| ||||| ||||||| ||| |||||||||   ||||| || | |||||||||| |  || || |||||    
T  17192194 aacggtaaaataccaacaacggttacttaacggtaaaatattaattactaccctagtaact---taaaataatggttctcactaaacactataaataatt 17192290  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  17192291 ctcaccaaaat 17192301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17939059 - 17939099
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgttttt 41  Q
    |||||||||||||||||||||||||| ||| ||| ||||||    
T  17939059 aaatgaaagtgtgaggaaatttctcacaagtgtaggttttt 17939099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 19306448 - 19306512
Alignment:
Q  169 aacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcac 233  Q
    |||||||||| ||||| |||||  |||||| ||| ||||||||||||||||| || | |||||||    
T  19306448 aacggtcacttaacggtaaaatactaattactacactagtaacttagtaaaataatggttctcac 19306512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 121; Significance: 5e-62; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 41153 - 41418
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||| |||||||| |||  |||| ||||||||||||||||||| |    
T  41153 aaatgaaagtgtgaggaaatttctcataagagtaggtttttacatcaaatctccttaatgggcctaaccctc-cactccatggacttaacccatttctat 41251  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    ||||  | ||||||||||||||| |  |  |||| |||||| |||||||| |   |||||||||||||||| |||| ||||||||||| |||| ||||||    
T  41252 tcaaaccaaaaatgtttctacactctaaccggtaattcactgataacggtcaagtaacggtaaaatgtcactaacgatcactaaacggtaaaaccttaat 41351  T
Q  197 ta-ttactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    || ||||||||||||||||||||||||||| ||||||||||||  |||||||||||| |||||||||    
T  41352 tatttactctagtaacttagtaaaacaacggttctcactaatcactaaaagtaattcccaccaaaat 41418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 46660 - 46925
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    ||||| |||||||||||||||||||||||||||| ||||||| ||||| || ||||||| |||||||| ||| | ||| ||||||||||| ||||||| |    
T  46660 aaatggaagtgtgaggaaatttctcataagagtaggtttttacatcaaatctccttaatgggcctaaccctcca-ctccatggacttaactcatttctat 46758  T
Q  101 tcaattcaaaa-tgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    ||||  ||||| ||||||||||| |  |  |||| |||||| |||||||| ||   ||||||||||||||| |||||||||||||||| |||| ||||||    
T  46759 tcaaaccaaaaatgtttctacactctaaccggtaattcactgataacggtcaagtaacggtaaaatgtcactaacggtcactaaacggtaaaaccttaat 46858  T
Q  197 tatt-actctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    |||| ||||||||||||||||||||||||| ||||||||||||  |||||||||||| |||||||||    
T  46859 tatttactctagtaacttagtaaaacaacggttctcactaatcactaaaagtaattcccaccaaaat 46925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 80492 - 80599
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| |||| |  ||||  ||||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  80492 aacggtaaaatgtcactaacggtcactaaacggtaaaaccacaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaatt 80589  T
Q  252 ctcaccaaaa 261  Q
    | ||||||||    
T  80590 cccaccaaaa 80599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 8e-61; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 11287911 - 11288175
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  |  |||||||| ||||| |||||||| ||||||||||||||||| | |||||||||||||||||       
T  11287911 aaatgaaagtgtgaggaaatttcctctaagacaagatttttatagcaagtgcccttaatgggcctaactctcaaacttattggacttaacccatttcaac 11288010  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggt---taaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    |||| || ||||||||||||||| || || |||| |||||||||||||||   |||||| ||||||   ||||||||||||||||||| |||| |||||     
T  11288011 tcaaatctaaaatgtttctacacacacaacggtaattcactaataacggtcaataaacgttaaaatactaccaacggtcactaaacggtaaaaccttaaa 11288110  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    | ||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  11288111 tgttactctagtaacttagtaaaacaacggttctcactaatcactaaaagtaattctcaccaaaa 11288175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 12369592 - 12369332
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||| ||||||||||||||||||||||||| |||||||||  | ||| |   ||| || ||||| ||||| || |||||||||||||||||||| |    
T  12369592 aaatgaaaatgtgaggaaatttctcataagagtaggtttttatagtatgtctcacaaatgggtctaaccctcaa-cttaatggacttaacccatttctat 12369494  T
Q  101 tcaattcaaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    |||  |||||||||||||||||  | || |||||||||||| |||||||||   ||||||||||||||||||||||||||||||||  |||||||||| |    
T  12369493 tcacatcaaaatgtttctacacatacaacggtatttcactactaacggttaaataacggtaaaatgtcaccaacggtcactaaacgataaaatcttaact 12369394  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
     |||||||||| |||||||||||||| | |||||||| ||   ||||| |||||||||||||||    
T  12369393 -ttactctagtcacttagtaaaacaa-ggttctcacttattactaaaattaattctcaccaaaa 12369332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 44865723 - 44865973
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    ||||||||||||||||||||||||||||  ||| ||||||||| |||||||||||||| |||||||| ||||| || |||||||||||| ||||||| ||    
T  44865723 aatgaaagtgtgaggaaatttctcataaatgtaggtttttataccaagtccccttaatgggcctaaccctcaa-cttaatggacttaactcatttctatt 44865821  T
Q  102 caattcaa-aatgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatt 200  Q
    ||  || | ||||||||||||| |  |  |||| |||||||||||||||        ||||| |||| |||||||||| ||||| |||||||||||| ||    
T  44865822 cacatctacaatgtttctacactctaaccggtaattcactaataacggt--------aaaatatcactaacggtcacttaacggtaaaatcttaatt-tt 44865912  T
Q  201 actctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||||||||||||||||| ||||||||||| |  ||||||||| |||||||||||    
T  44865913 actctagtaacttagtaaaacaactattctcactaaccactaaaagtaactctcaccaaaa 44865973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 47290277 - 47290537
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    ||||||||||||| |||||||||||  || ||| ||||||||| |||||  ||||||| ||||||||||| | ||| |||||||||||||||||||| ||    
T  47290277 aatgaaagtgtgaagaaatttctcaatagtgtaggtttttataccaagtttccttaatgggcctaactct-acacttaatggacttaacccatttctatt 47290375  T
Q  102 caattca-aaatgtttctacacccagaatggtatttcactaataacggttaaa---cggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    ||  ||  |||||||||||||| |  ||  ||| |||||| |||| ||| |||   |||||||||||||| |||||||||||||||| ||||||||||||    
T  47290376 cacatctcaaatgtttctacactct-aacagtaattcactcataatggtcaaataacggtaaaatgtcactaacggtcactaaacggtaaaatcttaatt 47290474  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
     |||||||| ||||||||||||||||| |||||||||||    |||||||||||||||||||||    
T  47290475 -ttactctattaacttagtaaaacaactattctcactaacaactaaaagtaattctcaccaaaa 47290537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 45451920 - 45451708
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||  ||||||||| ||  ||| |||||||||||||||||||| |    
T  45451920 aaatgaaagtgtgaggaaatttctcataagactaggtttttatatcaagtccccttaaagggcctaactgtc-cacttaatggacttaacccatttctat 45451822  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattat 199  Q
    ||||||| |||||||||||| || || || |||| |||||||||        ||||||||||| || |||||||||||||||||| ||||| | || |||    
T  45451821 tcaattcaaaaatgtttctatacacacaacggtaattcactaat--------aacggtaaaatatctccaacggtcactaaacggtaaaatgtcaactat 45451730  T
Q  200 tactctagtaacttagtaaaac 221  Q
    |||||||||||||  |||||||    
T  45451729 tactctagtaactcggtaaaac 45451708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 12759483 - 12759697
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |        ||| | || |||||| ||||||||||||| |    
T  12759483 aaataaaagtgtgaggaaatttttcataagagtaggtttttatatcaagtccccttaatgg--------ctcca-cttaatggatttaacccatttctat 12759573  T
Q  101 tcaattcaaaatgtttctacacccagaatggtatttcactaataacggt---taaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    |||| ||||||||||||||||| || || | ||||||||||||||||||   | |||| |||||  ||||||||| |||||| |||| ||||||||||||    
T  12759574 tcaaatcaaaatgtttctacacacacaacgatatttcactaataacggtcaattaacgttaaaacatcaccaacgatcactacacggtaaaatcttaatt 12759673  T
Q  198 attactctagtaacttagtaaaac 221  Q
    |||||||||||||||  |||||||    
T  12759674 attactctagtaactcggtaaaac 12759697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 16569759 - 16569495
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||    |||||||||  | ||||||| ||| |||||||| || || || |||||| |||||||||| |       
T  16569759 aaatgaaagtgtgaggaaatttcctctaagacatggtttttatagtatgtcccctaaatgggcctaaccctaaagcttaatggatttaacccattccaac 16569660  T
Q  101 tcaattcaa-aatgtttctacacccagaatggtatttcactaataacggttaaa---cggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    | ||||| | ||||||||||||| || || || | ||||||||||||||| |||   ||||||||| ||||||||||||||||||||| ||||| |||||    
T  16569659 ttaattctacaatgtttctacacacacaacggcaattcactaataacggtcaaataacggtaaaatatcaccaacggtcactaaacggtaaaatattaat 16569560  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||||||||||||||||||||||||  ||||||||||    ||||| ||||| |||||||||    
T  16569559 tattactctagtaacttagtaaaacaacagttctcactaaatactaaaaataattttcaccaaaa 16569495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 16595903 - 16596167
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||    |||||||||  | ||||||| ||| |||||||| || || || |||||| |||||||||| |       
T  16595903 aaatgaaagtgtgaggaaatttcctctaagacatggtttttatagtatgtcccctaaatgggcctaaccctaaagcttaatggatttaacccattccaac 16596002  T
Q  101 tcaattcaa-aatgtttctacacccagaatggtatttcactaataacggttaaa---cggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    | ||||| | ||||||||||||| || || || | ||||||||||||||| |||   ||||||||| ||||||||||||||||||||| ||||| |||||    
T  16596003 ttaattctacaatgtttctacacacacaacggcaattcactaataacggtcaaataacggtaaaatatcaccaacggtcactaaacggtaaaatattaat 16596102  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||||||||||||||||||||||||  ||||||||||    ||||| ||||| |||||||||    
T  16596103 tattactctagtaacttagtaaaacaacagttctcactaaatactaaaaataattttcaccaaaa 16596167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 3895517 - 3895766
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||| ||||| | |||||||| |||  ||| |||||||||||||||||||| |    
T  3895517 aaatgaaagtgtgaggaaatttctcataagagtaggtttttatactaagtctccttattgggcctaaccctc-cacttaatggacttaacccatttctat 3895615  T
Q  101 tca-attcaaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    ||| ||   |||||||||||||| |  |  |||| || |||||||||||| |   |||||||||||           ||||||||||| ||||||||| |    
T  3895616 tcacatctcaaatgtttctacactctaatcggtaattaactaataacggtcaagtaacggtaaaat----------atcactaaacggtaaaatcttagt 3895705  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcacca 258  Q
    | ||||||||||||||||||||||||||| |||||||||| |  ||||||||||||||||||    
T  3895706 t-ttactctagtaacttagtaaaacaacggttctcactaaccactaaaagtaattctcacca 3895766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 79 - 261
Target Start/End: Complemental strand, 7283739 - 7283566
Alignment:
Q  79 aatggacttaacccattt-cttttcaattcaaaatgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcac 177  Q
    |||||||||||||||||| || |||||  |||||||||||||||| || || |||| || ||||||||||||        |||||||||| |||||||||    
T  7283739 aatggacttaacccattttctattcaaaccaaaatgtttctacactcaaaaaggtaattaactaataacggt--------aaaatgtcactaacggtcac 7283648  T
Q  178 taaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||| ||| |||||||||||||  ||||||||| |||||||||||    
T  7283647 taaacggtaaaatcttagtt--tactctagtaacttagtaaaataactattctcactaatcactaaaagtaactctcaccaaaa 7283566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 13862550 - 13862442
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| |||||||||| | ||||||||||||||||||||||||||  |||||||||| |  |||||||||||    
T  13862550 aacggtaaaatgtcactaacggtcactaaacggtaaaatcttaact-ttactctagtaacttagtaaaacaacagttctcactaaccactaaaagtaatt 13862452  T
Q  252 ctcaccaaaa 261  Q
    ||||||||||    
T  13862451 ctcaccaaaa 13862442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 79 - 261
Target Start/End: Complemental strand, 110952 - 110778
Alignment:
Q  79 aatggacttaacccattt-cttttcaattcaaaatgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcac 177  Q
    ||||||||| |||||||| || |||||  |||||||||||||||| || || |||| || ||||||||||||        |||||||||| |||||||||    
T  110952 aatggacttgacccattttctattcaaaccaaaatgtttctacactcaaaaaggtaattaactaataacggt--------aaaatgtcactaacggtcac 110861  T
Q  178 taaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||| ||||||||| || |||||||||||||||||||||||||| ||||| ||||| |  ||||||||| |||||||||||    
T  110860 taaacggtaaaatcttagtt-ttactctagtaacttagtaaaacaactattcttactaaccactaaaagtaactctcaccaaaa 110778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 12247872 - 12247609
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  | |||||||||  | ||| ||| ||| |||||||| || || || |||||| ||||| | || |       
T  12247872 aaatgaaagtgtgaggaaatttcctctaagacaaggtttttatagtatgtctcctaaatgggcctaaccctaaagcttaatggatttaactctttccaac 12247773  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    |||| || ||||||||||||||| || || |||| | ||||||||||||| ||   |||||||||| | |||||| |||||||||||| ||||| |||||    
T  12247772 tcaaatctaaaatgtttctacacacacaacggtaat-cactaataacggtcaattaacggtaaaatattaccaacagtcactaaacggtaaaatattaat 12247674  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    || |||||||||||||||||||||||||  ||||||||||    ||||| |||||||| ||||||    
T  12247673 tactactctagtaacttagtaaaacaacagttctcactaaatactaaaaataattctcgccaaaa 12247609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 144272 - 144379
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||||| |  ||||||||| |    
T  144272 aacggtaaaatatcactaacggtcactaaacgcaaaaatcttaatt-ttactctagtaacttagtaaaacaacggttcccactaa-cactaaaagtaact 144369  T
Q  252 ctcaccaaaa 261  Q
    ||||||||||    
T  144370 ctcaccaaaa 144379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 2029555 - 2029663
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| || ||||||||| ||| ||||| |||||||||||| ||| |||||||||||||  |||||||||||    
T  2029555 aacggtaaaatgtcactaacggtcactaaacggtaagatcttaatt-ttattctaggaacttagtaaaataactattctcactaatcactaaaagtaatt 2029653  T
Q  252 ctcaccaaaa 261  Q
    | ||||||||    
T  2029654 cccaccaaaa 2029663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 1936637 - 1936530
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||||  ||||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  1936637 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaatt 1936540  T
Q  252 ctcaccaaaa 261  Q
    | ||||||||    
T  1936539 cccaccaaaa 1936530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 236
Target Start/End: Complemental strand, 26069359 - 26069135
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||||||||||||||||||||| ||  ||||| ||  ||||||| | ||| |||||||| ||||| || ||| || ||||||||||||| ||    
T  26069359 aatgaaagtgtgaggaaatttctcataagactagatttttgtagtaagtcccataaatgggcctaaccctcaa-cttaatagatttaacccatttctatt 26069261  T
Q  102 caattcaaaa-tgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatt 200  Q
    |||  ||||| ||||||||||| |  || | ||  ||||||||||||||        | ||| |||| ||||||||| |||||| |||||||||||| ||    
T  26069260 caaaccaaaaatgtttctacactccaaacgataaatcactaataacggt--------agaatatcactaacggtcaccaaacggtaaaatcttaatt-tt 26069170  T
Q  201 actctagtaacttagtaaaacaacgattctcactaa 236  Q
    |||||||| ||||||||||||||| |||||||||||    
T  26069169 actctagt-acttagtaaaacaactattctcactaa 26069135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 236
Target Start/End: Complemental strand, 26070017 - 26069793
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||||||||||||||||||||| ||  ||||| ||  ||||||| | ||| |||||||| ||||| || ||| || ||||||||||||| ||    
T  26070017 aatgaaagtgtgaggaaatttctcataagactagatttttgtagtaagtcccataaatgggcctaaccctcaa-cttaatagatttaacccatttctatt 26069919  T
Q  102 caattcaaaa-tgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatt 200  Q
    |||  ||||| ||||||||||| |  || | ||  ||||||||||||||        | ||| |||| ||||||||| |||||| |||||||||||| ||    
T  26069918 caaaccaaaaatgtttctacactccaaacgataaatcactaataacggt--------agaatatcactaacggtcaccaaacggtaaaatcttaatt-tt 26069828  T
Q  201 actctagtaacttagtaaaacaacgattctcactaa 236  Q
    |||||||| ||||||||||||||| |||||||||||    
T  26069827 actctagt-acttagtaaaacaactattctcactaa 26069793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 236
Target Start/End: Complemental strand, 26093804 - 26093580
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||||||||||||||||||||| ||  ||||| ||  ||||||| | ||| |||||||| ||||| || ||| || ||||||||||||| ||    
T  26093804 aatgaaagtgtgaggaaatttctcataagactagatttttgtagtaagtcccataaatgggcctaaccctcaa-cttaatagatttaacccatttctatt 26093706  T
Q  102 caattcaaaa-tgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatt 200  Q
    |||  ||||| ||||||||||| |  || | ||  ||||||||||||||        | ||| |||| ||||||||| |||||| |||||||||||| ||    
T  26093705 caaaccaaaaatgtttctacactccaaacgataaatcactaataacggt--------agaatatcactaacggtcaccaaacggtaaaatcttaatt-tt 26093615  T
Q  201 actctagtaacttagtaaaacaacgattctcactaa 236  Q
    |||||||| ||||||||||||||| |||||||||||    
T  26093614 actctagt-acttagtaaaacaactattctcactaa 26093580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 35095309 - 35095563
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    ||||| |||||||||||||||||||||||||||||||| ||||    ||| |   | | |||||||| |||||  | |||||||||||||||||||| ||    
T  35095309 aatgatagtgtgaggaaatttctcataagagtatgtttatatagtgtgtctcacaattgggcctaaccctcaattt-aatggacttaacccatttctatt 35095407  T
Q  102 caattcaaaa-tgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    |||  ||||| |||||||| |||      |||| ||||||||||||| | ||   ||||||||||||||  |||||||||||||||| ||||||||| ||    
T  35095408 caaaccaaaaatgtttcta-acc------ggtaattcactaataacgatcaagtaacggtaaaatgtcattaacggtcactaaacggtaaaatcttagtt 35095500  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
     ||||||||| ||||||||||||   | |||||||||||||  |||||||||||| | ||||||    
T  35095501 -ttactctagcaacttagtaaaattgctattctcactaatcactaaaagtaattccctccaaaa 35095563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 127053 - 127161
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  127053 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactattctcactaatcactaaaagtaatt 127150  T
Q  252 ctcaccaaaat 262  Q
      |||||||||    
T  127151 tccaccaaaat 127161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 32493662 - 32493559
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  | |||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  32493662 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--tcactctagtaacttaatgaaataactattctcactaatcactaaaagtaatt 32493565  T
Q  252 ctcacc 257  Q
    ||||||    
T  32493564 ctcacc 32493559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 254
Target Start/End: Original strand, 16212390 - 16212487
Alignment:
Q  155 ggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctc 254  Q
    ||||||||||||| ||| |||||||||||| ||||||| ||||  ||||||||||||||| | ||| ||| |||||||||||||  ||||||||||||||    
T  16212390 ggtaaaatgtcactaactgtcactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaattctc 16212487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 25124766 - 25124863
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| ||||||||||||   |||||||||||    
T  25124766 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactattctcactaattactaaaagtaatt 25124863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 15822185 - 15822119
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaac 68  Q
    ||||||||||||||||||||||||||||| |||  ||||||||||||||| ||||||| ||||||||    
T  15822185 aatgaaagtgtgaggaaatttctcataagtgtagatttttatatcaagtctccttaatgggcctaac 15822119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 11580382 - 11580275
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| ||| |||||||||||| ||||||| |||  ||| |||||||||||| | ||| |||  ||||||||||||  |||||||||||    
T  11580382 aacggtaaaatgtcactaacagtcactaaacggtaaaatctcaat--ttagtctagtaacttaatgaaataacttttctcactaatcactaaaagtaatt 11580285  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  11580284 c-caccaaaat 11580275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 262
Target Start/End: Original strand, 16920203 - 16920297
Alignment:
Q  168 caacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    ||||||||||| ||||| |||||  |||||| ||| ||||||||||||||||| || | |||||||||| |  ||||| ||||||||||||||||    
T  16920203 caacggtcacttaacggtaaaatactaattactaccctagtaacttagtaaaataatggttctcactaaacactaaaaataattctcaccaaaat 16920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 36053275 - 36053378
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||| |||||| || || |||| ||||  ||||||||||||||| | ||| ||| ||||||||||| |  |||||||||||    
T  36053275 aacggtaaaatgtcactaacggttactaaatggtaatatctcaatt--tactctagtaacttaatgaaataactattctcactaaacactaaaagtaatt 36053372  T
Q  252 ctcacc 257  Q
    ||||||    
T  36053373 ctcacc 36053378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 47480666 - 47480557
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | || |||||||||||||||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||| |  ||||| |||||    
T  47480666 aacggtaaaatataacaaacggtcactaaacggtaaaaact-aatcactacactagtaacttagtaaaataatggttctcactaaacattaaaaataatt 47480568  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  47480567 ctcaccaaaat 47480557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 13321638 - 13321745
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||  ||||||||||||||||| ||| ||||||| ||||  |||| ||| |||||| | ||| ||| |||||||||||||  |||||||||||    
T  13321638 aacggtaaaacatcaccaacggtcactaa-cggtaaaatctcaatt--tactttagcaacttaatgaaataactattctcactaatcactaaaagtaatt 13321734  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  13321735 cccaccaaaat 13321745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 261
Target Start/End: Complemental strand, 39046234 - 39046162
Alignment:
Q  187 aaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||||  ||||||||||||||| | ||| ||| |||||||||||||  |||||||||||||||||||||    
T  39046234 aaatcttaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaattctcaccaaaa 39046162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 262
Target Start/End: Original strand, 13390023 - 13390117
Alignment:
Q  168 caacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    ||||||||||| ||||| ||| |  || ||| ||| ||||||||||||||||| || | |||||||||| || ||||| ||||||||||||||||    
T  13390023 caacggtcacttaacggtaaagtactacttactaccctagtaacttagtaaaataatggttctcactaaacgttaaaaataattctcaccaaaat 13390117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 15928185 - 15928292
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  15928185 aacggtaaaatgtaaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 15928281  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  15928282 ctcaccaaaat 15928292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 16419112 - 16419220
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||| | | ||||||||||||||||||| |||| | |||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  16419112 aacggtaaattataaccaacggtcactaaacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 16419209  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  16419210 ctcaccaaaat 16419220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 17817076 - 17816969
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||  ||| |||||||||||||||| ||||||| |||  |||||| ||||||||| | ||| ||  |||||||||||||  |||||||||||    
T  17817076 aacggtaaaataccactaacggtcactaaacggtaaaatctcaat--ttactcaagtaacttaatgaaataattattctcactaatcactaaaagtaatt 17816979  T
Q  252 ctcaccaaaa 261  Q
    | ||| ||||    
T  17816978 cccactaaaa 17816969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 19049925 - 19050032
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||  ||| |||||||||||||||| ||||||| |||  |||||| ||||||||| | ||| ||  |||||||||||||  |||||||||||    
T  19049925 aacggtaaaataccactaacggtcactaaacggtaaaatctcaat--ttactcaagtaacttaatgaaataattattctcactaatcactaaaagtaatt 19050022  T
Q  252 ctcaccaaaa 261  Q
    | ||| ||||    
T  19050023 cccactaaaa 19050032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 260
Target Start/End: Complemental strand, 18253487 - 18253379
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatc-gataaaagtaat 250  Q
    ||||||||||| | ||||||||||||||||||| |||| | |||| | ||| ||||||||||||||||| || | |||||||||| |   ||||| ||||    
T  18253487 aacggtaaaatatgaccaacggtcactaaacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaaacatttaaaaataat 18253389  T
Q  251 tctcaccaaa 260  Q
    ||||||||||    
T  18253388 tctcaccaaa 18253379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 13910667 - 13910560
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||| ||||||||||| ||| |||| || ||| ||||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  13910667 aacggtaaaatataaccgacggtcactaa-cggtaaaaact-aatcattacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 13910571  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  13910570 ctcaccaaaat 13910560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 48622317 - 48622209
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||| | | ||||||||||||||||||| |||| | |||| | ||| ||||||||||| ||||| || | |||||||||| | || ||| |||||    
T  48622317 aacggtaaattataaccaacggtcactaaacggtaaaaac-taatcactacactagtaacttaataaaataagggttctcactaaac-attaaaataatt 48622220  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  48622219 ctcaccaaaat 48622209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 3050222 - 3050328
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||  ||| |||||||||||||||| ||  ||| || |  ||||||||||||||||||||| || | |||||||||| |  ||||| |||||    
T  3050222 aacggtaaaataccactaacggtcactaaacggtaa--tctcaact--tactctagtaacttagtaaaataatggttctcactaaacactaaaaataatt 3050317  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  3050318 cacaccaaaat 3050328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 262
Target Start/End: Complemental strand, 13036672 - 13036609
Alignment:
Q  199 ttactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    |||||||||| ||||| | ||||||| |||||||||||||  |||||||||||| || ||||||    
T  13036672 ttactctagtcacttaatgaaacaactattctcactaatcactaaaagtaattcccatcaaaat 13036609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 13378171 - 13378258
Alignment:
Q  169 aacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcac 256  Q
    |||||||||| ||||| |||||  |||||| ||| ||||||||||||||||| || | |||||| ||| |  ||||| ||||||||||    
T  13378171 aacggtcacttaacggtaaaatactaattactaccctagtaacttagtaaaataatggttctcattaaacactaaaaataattctcac 13378258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 49047429 - 49047307
Alignment:
Q  1 aaatgaaagtgtgaggaaattt-ctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctt 99  Q
    |||||||||||||||||||||| ||| |||||  | |||| ||||  | ||||||||||| |||||||| || || || | ||||||||||||| | |      
T  49047429 aaatgaaagtgtgaggaaattttctc-taagacaaggtttatatagaatgtccccttaatgggcctaaccctaaagcttagtggacttaacccactccaa 49047331  T
Q  100 ttcaattc-aaaatgtttctacac 122  Q
    |||||||| |||||||||||||||    
T  49047330 ttcaattctaaaatgtttctacac 49047307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 7823325 - 7823432
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | | ||||| |||  |||||| |||||    
T  7823325 aacggtaaaatataaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggtcctcaccaattaataaaa-taatt 7823421  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  7823422 ctcaccaaaat 7823432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 7830636 - 7830743
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | | ||||| |||  |||||| |||||    
T  7830636 aacggtaaaatataaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggtcctcaccaattaataaaa-taatt 7830732  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  7830733 ctcaccaaaat 7830743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 12899910 - 12900017
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | | ||||| |||  |||||| |||||    
T  12899910 aacggtaaaatataaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggtcctcaccaattaataaaa-taatt 12900006  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  12900007 ctcaccaaaat 12900017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 13759002 - 13759082
Alignment:
Q  180 aacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    ||||| ||||||| ||| ||||| ||||||||||||||||| || | |||||||||||  || ||| ||||||||||||||||    
T  13759002 aacggtaaaatct-aatcattacactagtaacttagtaaaataagggttctcactaat-tattaaaataattctcaccaaaat 13759082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 27101273 - 27101166
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | | ||||| |||  |||||| |||||    
T  27101273 aacggtaaaatataaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggtcctcaccaattaataaaa-taatt 27101177  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  27101176 ctcaccaaaat 27101166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 27177030 - 27177137
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | | ||||| |||  |||||| |||||    
T  27177030 aacggtaaaatataaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggtcctcaccaattaataaaa-taatt 27177126  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  27177127 ctcaccaaaat 27177137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 3060586 - 3060675
Alignment:
Q  169 aacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||||||||| || |||| || ||||  ||||||||||||||| | ||| ||  |||||||||||||  |||||||||||| ||||||||    
T  3060586 aacggtcactaaatggtaaaaactcaatt--tactctagtaactta-tgaaataattattctcactaatcactaaaagtaattcccaccaaaa 3060675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 262
Target Start/End: Original strand, 9081270 - 9081366
Alignment:
Q  166 accaacggtcactaaacggaaaaatcttaattattactctagtaacttag-taaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    ||||||||||||| ||||| ||| |  |||||| ||| ||||||||||||  |||| |||| |||||||||| |  ||||| ||||||||||||||||    
T  9081270 accaacggtcacttaacggtaaagtactaattactaccctagtaacttagcaaaaataacggttctcactaaccactaaaa-taattctcaccaaaat 9081366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 252
Target Start/End: Complemental strand, 14419787 - 14419735
Alignment:
Q  199 ttactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattc 252  Q
    ||||||||||||||||||||||  || |||||||||||||  ||||||||||||    
T  14419787 ttactctagtaacttagtaaaa-tactattctcactaatcactaaaagtaattc 14419735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 15759754 - 15759671
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaa 236  Q
    ||||||||||  | ||||||||||||||||||| |||| | |||| | ||  ||||||||||||||||| || | ||||||||||    
T  15759754 aacggtaaaacataaccaacggtcactaaacggtaaaaac-taatcactaaactagtaacttagtaaaataagggttctcactaa 15759671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 3e-60; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 4 - 261
Target Start/End: Original strand, 17367316 - 17367575
Alignment:
Q  4 tgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttc--tttt 101  Q
    ||||||||||||||||||||||||||| ||| ||||||||| |||||| ||||||| |||||||| |||  |||||||||||||||||||||||  |||     
T  17367316 tgaaagtgtgaggaaatttctcataagtgtaggtttttataccaagtctccttaatgggcctaaccctc-cactcaatggacttaacccatttctattta 17367414  T
Q  102 caattcaaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatta 198  Q
    ||  ||||||||||||||||| |  ||||||| |||||| |||||||| |   |||||||||||||||| |||||||||||||||| ||||||||||||     
T  17367415 catctcaaaatgtttctacactc-taatggtaattcacttataacggtcaagtaacggtaaaatgtcactaacggtcactaaacggtaaaatcttaatt- 17367512  T
Q  199 ttactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    | || || |||||||||||||||||| ||||||||||| |  |||||||||||||||||||||    
T  17367513 tcacgctggtaacttagtaaaacaactattctcactaaccactaaaagtaattctcaccaaaa 17367575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 25602520 - 25602786
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtcccc-ttaataggcctaactctcaaactcaatggacttaacccatttctt 99  Q
    |||||||||||||||||||||||   |||||  | |||||| ||  || ||||| ||||| ||||||||||||||||| |||||| |||||||||| |      
T  25602520 aaatgaaagtgtgaggaaatttcctctaagacaaggtttttgtagtaaatcccccttaatgggcctaactctcaaacttaatggatttaacccattccaa 25602619  T
Q  100 ttcaattca-aaatgtttctacacccagaatggtatttcactaataacggttaaa---cggtaaaatgtcaccaacggtcactaaacggaaaaatcttaa 195  Q
     | |||||  |||||||||||||| || || ||||  |||||||||||||| |||   ||||||||||||||||||||||||||||||| |||| |||||    
T  25602620 cttaattctcaaatgtttctacacacacaacggtaaatcactaataacggtcaaataacggtaaaatgtcaccaacggtcactaaacggtaaaaccttaa 25602719  T
Q  196 ttatt-actctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  25602720 ttatttactctagtaacttagtaaaacaacggttctcactaatcactaaaagtaattctcaccaaaa 25602786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 27262299 - 27262513
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  | ||||||||| |||||||||||||| ||||||||||||||||| |||||| ||||||||||||       
T  27262299 aaatgaaagtgtgaggaaatttcctctaagacaaggtttttatagcaagtccccttaatgggcctaactctcaaacttaatggatttaacccatttcaac 27262398  T
Q  101 tcaattcaaaatgtttctacacccagaatggtatttcactaataacggt---taaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    |||||  ||||||||||||||| || || ||| |||||||| |||||||   | |||| |||||  ||| ||||||||||||||||| ||||| | ||||    
T  27262399 tcaatctaaaatgtttctacacacacaacggtgtttcactattaacggtcaattaacgataaaacatcatcaacggtcactaaacggtaaaatatcaatt 27262498  T
Q  198 attactctagtaact 212  Q
    |||||||||||||||    
T  27262499 attactctagtaact 27262513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 36890437 - 36890181
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    ||||||||||||||||||||||||||||||| || |||||| ||  ||||||| | ||| |||||||| ||| |||| |||||||||||| ||||||| |    
T  36890437 aaatgaaagtgtgaggaaatttctcataagactaggtttttgtagtaagtcccataaatgggcctaaccctc-aacttaatggacttaactcatttctat 36890339  T
Q  101 tc-aattcaaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    || ||   ||||| ||||||||| |  |||||||  |||||||||||||| |   ||||||| ||| |||  | |||||||||||||| |||||||||||    
T  36890338 tcaaacaaaaaatatttctacactccaaatggtaaatcactaataacggtcaaataacggtagaatatcattatcggtcactaaacggtaaaatcttaat 36890239  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctca 255  Q
    | |||||||||||||||||||||||||  ||||||||||| |  |||||||||||||||    
T  36890238 t-ttactctagtaacttagtaaaacaattattctcactaaccactaaaagtaattctca 36890181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 61 - 261
Target Start/End: Complemental strand, 25875618 - 25875427
Alignment:
Q  61 ggcctaactctcaaactcaatggacttaacccatttcttttcaattca-aaatgtttctacacccagaatggtatttcactaataacggttaaacggtaa 159  Q
    |||||||| ||||| || |||||||||||||||||||| ||||| ||| ||||||||||||||  | ||  |||||||||||||||||||        ||    
T  25875618 ggcctaaccctcaacct-aatggacttaacccatttctattcaactcacaaatgtttctacacatacaacagtatttcactaataacggt--------aa 25875528  T
Q  160 aatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaa 259  Q
    |||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| |||||||   |||||||||||||||||||    
T  25875527 aatgtcactaacggtcactaaacggtaaaatcttaatt-ttactctagtaacttagtaaaacaacggttcccactaattactaaaagtaattctcaccaa 25875429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 79 - 261
Target Start/End: Complemental strand, 23836387 - 23836202
Alignment:
Q  79 aatggacttaacccatttcttttcaattcaaaa-tgtttctacacccagaatggtatttcactaataacggttaaa---cggtaaaatgtcaccaacggt 174  Q
    |||||||||||||||||||| |||||  ||||| ||||||||||| |  |  || | ||||||||||||||| |||   |||||||||||||| ||||||    
T  23836387 aatggacttaacccatttctattcaaaccaaaaatgtttctacactctaaccggcaattcactaataacggtcaaataacggtaaaatgtcactaacggt 23836288  T
Q  175 cactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    || ||||||| ||||||||| || ||||||||||||||||| |||||||| |||||||||||||  |||||||||||||||||||||    
T  23836287 cattaaacggtaaaatcttagtt-ttactctagtaacttagcaaaacaactattctcactaatcactaaaagtaattctcaccaaaa 23836202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 2 - 262
Target Start/End: Original strand, 42535103 - 42535364
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    ||||||||||||||||||||||||| ||| | |||||||| ||   |||| ||||| | || ||||| ||| | || ||| |||||||| ||||||||||    
T  42535103 aatgaaagtgtgaggaaatttctcagaagtgcatgtttttgtactcagtctccttattgggtctaaccctcca-cttaatagacttaactcatttctttt 42535201  T
Q  102 ca-at-tcaaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    || || |||||| |||||||||| |  |  |||| ||||||||||| ||| ||   ||||||||||||||| |||||||||||||||| ||||||||| |    
T  42535202 cacatctcaaaa-gtttctacactctaaccggtaattcactaataatggtcaagtaacggtaaaatgtcactaacggtcactaaacggtaaaatcttagt 42535300  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    |  ||||||||||||||||||||| ||| |||||||||||||  |||||| ||||| |||||||||    
T  42535301 t--tactctagtaacttagtaaaataactattctcactaatcactaaaagcaattcccaccaaaat 42535364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 4447886 - 4447674
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  | ||||||||||||||||||||||||  |||||||||||||||| |||||| ||||| ||||||       
T  4447886 aaatgaaagtgtgaggaaatttcctctaagacaaggtttttatatcaagtccccttaatgagcctaactctcaaacttaatggatttaactcatttcaac 4447787  T
Q  101 tcaattcaaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    ||| |  ||||||||||||||  || ||  ||| || |||||||||||| |   ||||||||||  | ||||||| |||||||| || |||| |||||||    
T  4447786 tcactctaaaatgtttctaca--cacaacagtaatttactaataacggtcaaataacggtaaaacattaccaacgatcactaaatggtaaaaccttaatt 4447689  T
Q  198 attactctagtaact 212  Q
    |||||||||||||||    
T  4447688 attactctagtaact 4447674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 28974542 - 28974807
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    ||||||||||||||| || ||||   |||||  | |||||||||  ||||||||  ||| |||||||| || || ||  ||||| |||||||||| |  |    
T  28974542 aaatgaaagtgtgagaaagtttcctctaagacaaggtttttatagtaagtcccccaaatgggcctaaccctaaagcttcatggatttaacccattccaat 28974641  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggt---taaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    |||| || ||||||||||||||| || || |||| |||||||||||||||   |||||||||||||   ||||||| ||||| || ||  ||| ||||||    
T  28974642 tcaaatctaaaatgtttctacacacacaacggtaattcactaataacggtcaataaacggtaaaatactaccaacgatcacttaagggtgaaaccttaat 28974741  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    |||||||||| |||||||||||||||  | |||||||||| |  || |||||||||||||||||||    
T  28974742 tattactctaataacttagtaaaacattggttctcactaaacactagaagtaattctcaccaaaat 28974807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 85 - 262
Target Start/End: Original strand, 8891766 - 8891934
Alignment:
Q  85 cttaacccatttcttttcaattcaaaatgtttctacac-ccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcactaaacg 183  Q
    |||||||||||||| |||||  |||||||||||| ||| |||||| |||| || ||||||||||        |||||||||||| |||||||||||||||    
T  8891766 cttaacccatttctattcaaaccaaaatgtttcttcactccagaaaggtaattaactaataacg--------gtaaaatgtcactaacggtcactaaacg 8891857  T
Q  184 gaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    | ||||||| |||  |||| ||||||||||| | ||| ||| |||||||||||||  |||||||||||| |||||||||    
T  8891858 gtaaaatctcaat--ttaccctagtaacttaatgaaataactattctcactaatcactaaaagtaattcccaccaaaat 8891934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 81 - 261
Target Start/End: Original strand, 32466423 - 32466606
Alignment:
Q  81 tggacttaacccatttcttttcaattcaaaa-tgtttctacacccagaatggtatttcactaataacggttaaa---cggtaaaatgtcaccaacggtca 176  Q
    |||||||||||||||||| |||||  ||||| ||||||||||| |  |  || | |||||||||||||||||||   |||||| ||||||| ||||||||    
T  32466423 tggacttaacccatttctattcaaaccaaaaatgtttctacactctaaccggcaattcactaataacggttaaataacggtaagatgtcactaacggtca 32466522  T
Q  177 ctaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||| ||||||| |||| |||||||| ||||||| | ||| ||| |||||| ||||||  ||||||||| |||||| ||||    
T  32466523 ctaaacggtaaaatctcaatt-ttactctaataacttaatgaaataactattctctctaatcactaaaagtaactctcacaaaaa 32466606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 259
Target Start/End: Complemental strand, 19794347 - 19794241
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| |||| |||||||||||||||  ||||||| |||| ||||||||||||||||| |||| ||| |||||||||||||  |||||||||||    
T  19794347 aacggtaaaatatcactaacggtcactaaacgataaaatctcaatt-ttactctagtaacttagcaaaataaccattctcactaatcactaaaagtaatt 19794249  T
Q  252 ctcaccaa 259  Q
    | ||||||    
T  19794248 cccaccaa 19794241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 22863545 - 22863653
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||| ||||||||| ||||||  ||||  ||||||||||||||||||||| ||| || ||||||||||  |||||||||||    
T  22863545 aacggtaaaatgtcactaacggttactaaacggtaaaatcccaatt--tactctagtaacttagtaaaataactatcctcactaatcactaaaagtaatt 22863642  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  22863643 cccaccaaaat 22863653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 152 - 254
Target Start/End: Original strand, 463338 - 463438
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| |||| ||||||||  |||||||||||    
T  463338 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactattcgcactaatcactaaaagtaatt 463435  T
Q  252 ctc 254  Q
    |||    
T  463436 ctc 463438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 43642597 - 43642489
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| ||||||||||||||||  |||||| ||||  ||||||||||||||| | |||  || |||||||||||||  |||||||||||    
T  43642597 aacggtaaaatgtcactaacggtcactaaacggtgaaatctcaatt--tactctagtaacttaatgaaatgactattctcactaatcactaaaagtaatt 43642500  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  43642499 cccaccaaaat 43642489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 9652518 - 9652434
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatc 238  Q
    |||||||||||||||| ||| |||||||||||| ||||||| |||  |||||||||||||||||| ||| ||| |||||||||||||    
T  9652518 aacggtaaaatgtcactaactgtcactaaacggtaaaatctcaat--ttactctagtaacttagtgaaataactattctcactaatc 9652434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 20626967 - 20626859
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| ||  |||||||||||| ||||||| ||||  ||||||||||||||| | ||| ||  |||||||||||||  |||||||||||    
T  20626967 aacggtaaaatgtcactaattgtcactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataattattctcactaatcactaaaagtaatt 20626870  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  20626869 cccaccaaaat 20626859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 254
Target Start/End: Complemental strand, 24087052 - 24086949
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcact-aaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaat 250  Q
    ||||||||||| ||||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||| || | ||| |||||| |  ||||| ||||    
T  24087052 aacggtaaaatatcaccaacggtcacttaaacggtaaaatattaattactactctagtaacttagtaaaataatggttcccactaaacactaaaaataat 24086953  T
Q  251 tctc 254  Q
    ||||    
T  24086952 tctc 24086949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 16936193 - 16936302
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||||||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||| |  ||||| |||||    
T  16936193 aacggtaaaatataaccaacggtcactaaacggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaaacattaaaaataatt 16936291  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  16936292 ctcaccaaaat 16936302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 17006853 - 17006962
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||||||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||| |  ||||| |||||    
T  17006853 aacggtaaaatataaccaacggtcactaaacggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaaacattaaaaataatt 17006951  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  17006952 ctcaccaaaat 17006962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 23805948 - 23805845
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| ||||||| |||||||  ||||||| ||||  |||||| |||||||| | ||| ||| |||||||||||||  |||||||||||    
T  23805948 aacggtaaaatgtcactaacggtcgctaaacgataaaatctcaatt--tactcttgtaacttaatgaaataactattctcactaatcactaaaagtaatt 23805851  T
Q  252 ctcacc 257  Q
    ||||||    
T  23805850 ctcacc 23805845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 25213679 - 25213787
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||||||| |||| | |||| | ||| ||||||||||||||||| || | ||||||||||| | ||||| |||||    
T  25213679 aacggtaaaatataaccaacggtcactaaacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaattgttaaaa-taatt 25213776  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  25213777 ctcaccaaaat 25213787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 271662 - 271770
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||| | ||||||||||||||| || |||||||||  | ||| | | ||| |||||||| ||| |||| |||||||||||||||||||| ||    
T  271662 aatgaaagtgtgtgaaaatttctcataagactaggtttttatagtaggtctcataaatgggcctaaccctc-aacttaatggacttaacccatttctatt 271760  T
Q  102 caattcaaaa 111  Q
    ||| ||||||    
T  271761 caagtcaaaa 271770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 23821403 - 23821294
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| ||  |||| |||||  ||||| |||||  |||||||||| |||||||||||| |||| || |||||||||||| |  ||||| |||||    
T  23821403 aacggtaaaatatctacaacagtcacataacggtaaaatactaattattaccctagtaacttagcaaaataatgattctcactaaacactaaaaataatt 23821304  T
Q  252 ctcaccaaaa 261  Q
    ||||||||||    
T  23821303 ctcaccaaaa 23821294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 23830482 - 23830373
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| ||  |||| |||||  ||||| |||||  |||||||||| |||||||||||| |||| || |||||||||||| |  ||||| |||||    
T  23830482 aacggtaaaatatctacaacagtcacataacggtaaaatactaattattaccctagtaacttagcaaaataatgattctcactaaacactaaaaataatt 23830383  T
Q  252 ctcaccaaaa 261  Q
    ||||||||||    
T  23830382 ctcaccaaaa 23830373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 2155425 - 2155315
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||   | ||||||||||| | ||| |||||  |||||| ||| ||||||||||||||||| || | |||||||||| |  ||||| |||||    
T  2155425 aacggtaaaatactagcaacggtcacttatcggtaaaatactaattactacactagtaacttagtaaaataatggttctcactaaacactaaaaataatt 2155326  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  2155325 ctcaccaaaat 2155315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 19689051 - 19688944
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  19689051 aacggtaaaatgtaaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 19688955  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  19688954 ctcaccaaaat 19688944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 22256493 - 22256601
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | |||||||| |||||||||| ||||  ||||| | ||| ||||||||||||||||| || | |||||||||| |  ||||| |||||    
T  22256493 aacggtaaaatataaccaacggacactaaacggtaaaa-attaatcactacactagtaacttagtaaaataatggttctcactaaacactaaaa-taatt 22256590  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  22256591 ctcaccaaaat 22256601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 22284601 - 22284710
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||| |||||| | |||||||||| |||||||| |||| || ||||| ||| ||||||||||||||||| || | ||||| |||| |  ||||| |||||    
T  22284601 aacgttaaaatataaccaacggtccctaaacggtaaaaact-aattactacactagtaacttagtaaaataatggttctcgctaaacactaaaaataatt 22284699  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  22284700 ctcaccaaaat 22284710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 24571045 - 24570924
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  | |||||||||  | ||||||| ||| |||||||| || ||||| ||||||||||||| |||||  |    
T  24571045 aaatgaaagtgtgaggaaatttcctctaagataaggtttttataggatgtcccctaaatgggcctaaccct-aaacttaatggacttaacctatttccat 24570947  T
Q  101 tcaattc-aaaatgtttctacac 122  Q
    |||| || |||||||||||||||    
T  24570946 tcaaatctaaaatgtttctacac 24570924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 25265014 - 25264952
Alignment:
Q  199 ttactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||||||||| | ||| ||| |||||||||||||  |||||||||||||||||||||    
T  25265014 ttactctagtaacttaatgaaataactattctcactaatcactaaaagtaattctcaccaaaa 25264952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 28030860 - 28030751
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||| ||| |||| || ||||| ||  ||||||||||||||||| || | |||||||||| |  ||||| |||||    
T  28030860 aacggtaaaatataaccaacggtcactaagcggtaaaaact-aattactatactagtaacttagtaaaataatggttctcactaaacattaaaaataatt 28030762  T
Q  252 ctcaccaaaat 262  Q
     ||||||||||    
T  28030761 ttcaccaaaat 28030751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 22275368 - 22275435
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaa 220  Q
    ||||||||||| | ||||||||||||||||||| ||||  ||||||| ||| |||||||||||||||||    
T  22275368 aacggtaaaatataaccaacggtcactaaacggtaaaa-attaattactacactagtaacttagtaaaa 22275435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 22579615 - 22579422
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  | |||||||||  | ||||||| ||| |||||||| || |  || ||||||||||||||| |||       
T  22579615 aaatgaaagtgtgaggaaatttcctctaagacaaggtttttataggatgtcccctaaatgggcctaaccctaaggcttaatggacttaacccaattccac 22579516  T
Q  101 tc-aattcaaaatgtttctacacccagaatggtatttcactaataacggt---taaacggtaaaatgtcaccaacggtcactaaacggaaaaat 190  Q
    || |||| ||||||||||||||| || || | ||  ||||||||||||||   | |||||||||||   ||||||||||||  ||||| |||||    
T  22579515 tcaaatttaaaatgtttctacacacacaacgataaatcactaataacggtcacttaacggtaaaattctaccaacggtcacctaacggtaaaat 22579422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 23777687 - 23777578
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcga-taaaagtaat 250  Q
    ||||||||||| | ||||||||||||||||||| |||| | |||| | ||| ||||||||||||||||| || | ||||||| |||  | ||||| ||||    
T  23777687 aacggtaaaatataaccaacggtcactaaacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcac-aatatattaaaaataat 23777590  T
Q  251 tctcaccaaaat 262  Q
    ||||||||||||    
T  23777589 tctcaccaaaat 23777578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 262
Target Start/End: Complemental strand, 2826 - 2732
Alignment:
Q  168 caacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    ||||||||||| ||||| |||||  |||||| ||| ||||||||||||||||| || | || ||||||| |  ||||| ||||||||| ||||||    
T  2826 caacggtcacttaacggtaaaatactaattactacactagtaacttagtaaaataatggttatcactaaacactaaaaataattctcatcaaaat 2732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 5888281 - 5888173
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||| | | ||||||||||||||||||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  5888281 aacggtaaattataaccaacggtcactaaacggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 5888184  T
Q  252 ctcaccaaaat 262  Q
    |||| ||||||    
T  5888183 ctcatcaaaat 5888173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 7507481 - 7507373
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||||| | |||| | |||| | ||| ||||||||||| ||||| || | |||||||||| |  ||||| |||||    
T  7507481 aacggtaaaatataaccaacggtcactaaaccgtaaaaac-taatcactacactagtaacttattaaaataagggttctcactaaacactaaaa-taatt 7507384  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  7507383 ctcaccaaaat 7507373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 22762888 - 22762808
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcac 233  Q
    |||||||||||   ||||||||||||| ||||| ||| | ||||||| ||||||||||||| ||||||| |||| |||||||    
T  22762888 aacggtaaaatactaccaacggtcacttaacggtaaa-tattaattactactctagtaactcagtaaaataacggttctcac 22762808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 261
Target Start/End: Complemental strand, 36982075 - 36981990
Alignment:
Q  173 gtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||||| ||||||| ||||  ||||||||||||||| | ||| ||| ||||||||| |||  |||||||||||| ||||||||    
T  36982075 gtcactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcact-atcactaaaagtaattcccaccaaaa 36981990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 260
Target Start/End: Complemental strand, 24294091 - 24294011
Alignment:
Q  180 aacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaa 260  Q
    ||||| |||||  |||||| ||| |||||||||||| |||| || | |||||||||| |  ||||||||||||||||||||    
T  24294091 aacggtaaaatactaattactaccctagtaacttagcaaaataaaggttctcactaaacactaaaagtaattctcaccaaa 24294011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 262
Target Start/End: Original strand, 25306078 - 25306166
Alignment:
Q  174 tcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    ||||| ||||| |||||  |||||| |||| |||||||||||||||| ||   |||||||||| |  ||||| ||||||||||||||||    
T  25306078 tcacttaacggtaaaatactaattactactttagtaacttagtaaaataatagttctcactaaacactaaaaataattctcaccaaaat 25306166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 15633847 - 15633913
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaa 219  Q
    ||||||||| |||||| |||||||||||||| | ||||||||| || |||||||| ||||||| ||||    
T  15633847 aacggtaaagtgtcactaacggtcactaaacagtaaaatcttagtt-ttactctaataacttaataaa 15633913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 17396303 - 17396206
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| ||||||||||||| ||||| |||| | |||| | ||| ||||| ||||||||||| || | ||||||||||| | |||||| ||||    
T  17396303 aacggtaaaatgtaaccaacggtcact-aacggtaaaaac-taatcactacactagtgacttagtaaaataagggttctcactaattgctaaaagcaatt 17396206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 236
Target Start/End: Complemental strand, 19668717 - 19668650
Alignment:
Q  169 aacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaa 236  Q
    |||||||||| ||||| |||||  |||||| || |||||||||||||||||| || | ||||||||||    
T  19668717 aacggtcacttaacggtaaaatactaattactattctagtaacttagtaaaataatggttctcactaa 19668650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 28775445 - 28775338
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | | ||||| |||  |||||| |||||    
T  28775445 aacggtaaaatataaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggtcctcaccaattaataaaa-taatt 28775349  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  28775348 ctcaccaaaat 28775338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 33128686 - 33128793
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| || |||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | ||||||||||   || ||| |||||    
T  33128686 aacggtaaaatgtaacgaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaa-atattaaaataatt 33128782  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  33128783 ctcaccaaaat 33128793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 42177608 - 42177501
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||| ||| ||||| | ||| | ||| ||||||||||||||||| || | ||||||||||   || ||| |||||    
T  42177608 aacggtaaaatctaaccaacggtcactaa-cggtaaaatat-aatcactacactagtaacttagtaaaataagggttctcactaa-atattaaaataatt 42177512  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  42177511 ctcaccaaaat 42177501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 31145932 - 31145839
Alignment:
Q  1 aaatgaaagtgtg-aggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaaccca 93  Q
    ||||||||||||| ||||||||||   |||||  |||||| ||||  | ||||||||||| |||||||  || ||||| |||||||||||||||    
T  31145932 aaatgaaagtgtgtaggaaatttcctctaagacaatgtttatataggatgtccccttaatgggcctaagcctaaaacttaatggacttaaccca 31145839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 5431 - 5182
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| ||| || | |||||||||||||||||||| ||    
T  5431 aatgaaagtgtgaggaaatttctcataagagtaggtttttatatcaagtctccttaatgggcctaaccctc-aagttaatggacttaacccatttctatt 5333  T
Q  102 caattcaaaatgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatta 201  Q
    |||  | |||||||||||||| |  | | ||| | |||||||        |||||||||||||||  |||||||||||||||| |||||||||||| |||    
T  5332 caaaccgaaatgtttctacacactaactagtaatccactaat--------aacggtaaaatgtcagtaacggtcactaaacggtaaaatcttaatt-tta 5242  T
Q  202 ctctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||| ||||||||||||||||| ||||||||||| |  |||||||||||||||||||||    
T  5241 ctctaataacttagtaaaacaacaattctcactaaccactaaaagtaattctcaccaaaa 5182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 7212 - 7319
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  7212 aacggtaaaatgtaaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 7308  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  7309 ctcaccaaaat 7319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 24479 - 24217
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||| ||||| | |||||||| |||  ||| |||||||||||||||||||| |    
T  24479 aaatgaaagtgtgaggaaatttctcataagagtaggtttttatactaagtctccttattgggcctaaccctc-cacttaatggacttaacccatttctat 24381  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    ||||  | ||||||||||||||| |  |  |||| || |||||||||||| |   |||||||||||||||| |||||||||||||||| | |||||||||    
T  24380 tcaaaccaaaaatgtttctacactctaaccggtaattaactaataacggtcaagtaacggtaaaatgtcacgaacggtcactaaacggtagaatcttaat 24281  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    | ||||||||||||||||||||| ||||| ||||||||||||  |||||||||||||||| ||||    
T  24280 t-ttactctagtaacttagtaaaccaacggttctcactaatcactaaaagtaattctcacaaaaa 24217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 110; Significance: 2e-55; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 23185 - 23446
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| |||||| ||||||| |||||||||||| |||| ||||||||||| |||||||  ||    
T  23185 aatgaaagtgtgaggaaatttctcataagtgtaggtttttataccaagtctccttaatgggcctaactctc-aacttaatggacttaatccatttcgatt 23283  T
Q  102 ca-attcaaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    || ||  ||||||||||||||| |  |  |||| ||||||||||||||| |   ||||||||||| |||| || ||||||||||||| |||||| |||||    
T  23284 cacatctaaaatgtttctacactctaaccggtaattcactaataacggtaaaataacggtaaaatatcactaatggtcactaaacggtaaaatcataatt 23383  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
     |||||||||||||||||||||||||| ||||| ||||| |  ||||||||| |||||||||||    
T  23384 -ttactctagtaacttagtaaaacaactattcttactaaccactaaaagtaactctcaccaaaa 23446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 261
Target Start/End: Original strand, 35564 - 35667
Alignment:
Q  157 taaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcac 256  Q
    |||||| |||| |||||||||||||||| |||||||||||| |||||| ||||||||||| ||||||  ||||| ||||| |  ||||||||| | ||||    
T  35564 taaaatatcactaacggtcactaaacggtaaaatcttaatt-ttactcgagtaacttagttaaacaaatattcttactaaccactaaaagtaactttcac 35662  T
Q  257 caaaa 261  Q
    |||||    
T  35663 caaaa 35667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 254
Target Start/End: Complemental strand, 127822 - 127722
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| ||||||||| |||||| ||| ||| |||  |||||||||||||||| | ||| ||| |||| ||| ||||  |||||||||||    
T  127822 aacggtaaaatgtcactaacggtcacaaaacggtaaagtctcaat--ttactctagtaacttaatgaaataactattcacaccaatcactaaaagtaatt 127725  T
Q  252 ctc 254  Q
    |||    
T  127724 ctc 127722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 5 - 259
Target Start/End: Original strand, 4780 - 5035
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttcaa 104  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| ||||| |||||||||| ||| | || ||||||||||| |||||||| |||||    
T  4780 gaaagtgtgaggaaatt-ctcataagagtatgtttttataccaagtctccttattaggcctaaccctcca-cttaatggacttaaaccatttctattcaa 4877  T
Q  105 ttcaaaa-tgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatt 200  Q
      ||||| ||||||||||| |  |  |||| ||||||||||||||| ||   | ||||||||||||| |||||||||||||||| |||||||||||| ||    
T  4878 accaaaaatgtttctacactctaaccggtaattcactaataacggtcaagtaaaggtaaaatgtcactaacggtcactaaacggtaaaatcttaatt-tt 4976  T
Q  201 actctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaa 259  Q
    ||||||||||||||||||||||| | ||||||||||||  |||||  ||||||||||||    
T  4977 actctagtaacttagtaaaacaatggttctcactaatcactaaaaacaattctcaccaa 5035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 7e-55; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 21397585 - 21397846
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||||||||| ||| |||||||||  ||||| ||||||| |||||||| ||| | || |||||||||||||||||||| |    
T  21397585 aaatgaaagtgtgaggaaatttctcataagtgtaggtttttatacaaagtctccttaatgggcctaaccctcca-cttaatggacttaacccatttctat 21397683  T
Q  101 tcaattca-aaatgtttctacacccagaatggtatttcactaataacggttaa--acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    |||  ||  |||||||||||||| |  || |||| ||||||||||||||| ||  |||||||||| || |||| ||||||||||||| |||| ||||| |    
T  21397684 tcagatctcaaatgtttctacactct-aacggtaattcactaataacggtcaataacggtaaaatatcgccaatggtcactaaacggtaaaaccttaaat 21397782  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||||||||||||||||||||| || ||||||||| ||   ||||||||||||||||||||    
T  21397783 attactctagtaacttagtaaaacatcggttctcactactcaccaaaagtaattctcaccaaaa 21397846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 11336937 - 11336674
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    ||||||||||||| |||||||||   |||||  | ||||||||| |||||||||||||| |||||||| ||||| || |||||| ||||||||||||       
T  11336937 aaatgaaagtgtgtggaaatttcctctaagacaaggtttttatagcaagtccccttaatgggcctaaccctcaa-cttaatggatttaacccatttcaac 11336839  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggt---taaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    |||  || ||||||||||||| | || || |||| ||||| |||||||||   |||||||||||||   |||||| |||||| ||||| |||| ||||||    
T  11336838 tcacatctaaaatgtttctacccacacaacggtaattcaccaataacggtcaataaacggtaaaatcctaccaacagtcacttaacggtaaaaccttaat 11336739  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||| |||||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  11336738 tattactcaagtaacttagtaaaacaacggttctcactaatcactaaaagtaattctcaccaaaa 11336674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 20712569 - 20712831
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||||||||| ||| ||||||| |  ||||| ||||| | |||||||| ||| | || |||||||||||||||||||| |    
T  20712569 aaatgaaagtgtgaggaaatttctcataagtgtaggtttttagactaagtctccttatttggcctaaccctcca-cttaatggacttaacccatttctat 20712667  T
Q  101 tcaattca-aaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    |||  ||  |||||||||||||| |  |  |||| || ||||||| |||| ||   ||||||||||||||| |||||||||||||||| ||||||||| |    
T  20712668 tcacatctcaaatgtttctacactctaaccggtaattaactaatagcggtcaagtaacggtaaaatgtcactaacggtcactaaacggtaaaatcttagt 20712767  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    | ||||| |||||||||||||||||||| ||||| ||||| |  ||||||||| |||||||||||    
T  20712768 t-ttactttagtaacttagtaaaacaactattcttactaaccactaaaagtaactctcaccaaaa 20712831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 262
Target Start/End: Complemental strand, 21646490 - 21646243
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttcaa 104  Q
    ||||||||||||||||| |||||||||||| |||||||||| ||||| ||||| | |||||||| ||| | || |||||||||| ||||| ||| |||||    
T  21646490 gaaagtgtgaggaaatt-ctcataagagtaggtttttatattaagtctccttattgggcctaaccctcca-cttaatggacttatcccatctctattcaa 21646393  T
Q  105 ttcaaaa-tgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattact 203  Q
      ||||| ||||||||||| |  |  |||| ||||||||        |||||||||||| |||| |||||||||||||||| |||||||||||| |||||    
T  21646392 accaaaaatgtttctacactccaaccggtaattcactaa--------aaacggtaaaatatcactaacggtcactaaacggtaaaatcttaatt-ttact 21646302  T
Q  204 ctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    ||||||||||||||||| ||| |||||||||||||  |||||||| ||| |||||||||    
T  21646301 ctagtaacttagtaaaataactattctcactaatcactaaaagtatttcccaccaaaat 21646243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 24182884 - 24182665
Alignment:
Q  4 tgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttca 103  Q
    ||||||||||||||||||||   |||||  | |||||||||||||||||||||||| ||||||||||||||| | |||||| ||||||||||||   |||    
T  24182884 tgaaagtgtgaggaaatttcctctaagacaaggtttttatatcaagtccccttaatgggcctaactctcaaatttaatggatttaacccatttcaactca 24182785  T
Q  104 attcaaaatgtttctacacccagaatggtatttcactaataacggtta--aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatta 201  Q
     |  |||||| | |||||| || || |||| ||||||||||||||  |  ||||||||||| |||||||| | |||||||||| |||| |||||||||||    
T  24182784 ttctaaaatgctcctacacacacaacggtagttcactaataacggccaataacggtaaaatatcaccaacagccactaaacggtaaaaccttaattatta 24182685  T
Q  202 ctctagtaacttagtaaaac 221  Q
    |||||||||||  |||||||    
T  24182684 ctctagtaactcggtaaaac 24182665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 27182193 - 27182084
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| ||||||||||||| || ||||||| |||| |||||||||||||||||||||| ||| |||||||||||||  |||||||||||    
T  27182193 aacggtaaaatgtcactaacggtcactaaaaggtaaaatctaaatt-ttactctagtaacttagtaaaataactattctcactaatcactaaaagtaatt 27182095  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  27182094 cccaccaaaat 27182084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 261
Target Start/End: Original strand, 11584621 - 11584795
Alignment:
Q  79 aatggacttaacccattt-cttttcaattcaaaatgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcac 177  Q
    |||||||||||||||||| || |||||  |||||||||||||||| || || |||| || ||||||||||||        |||||||||| |||||||||    
T  11584621 aatggacttaacccattttctattcaaaccaaaatgtttctacactcaaaaaggtaattaactaataacggt--------aaaatgtcacaaacggtcac 11584712  T
Q  178 taaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||| ||||| | || | |||||||||||||||||||||| ||| ||||||| |||||  |||||||||||| ||||||||    
T  11584713 taaacggtaaaatgtcaact-ttactctagtaacttagtaaaataactattctcaataatcactaaaagtaattcccaccaaaa 11584795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 21907192 - 21907263
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctc 72  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||    
T  21907192 aaatgaaagtgtgaggaaatttctcataagactaggtttttatatcaagtccccttaatgggcctaactctc 21907263  T

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Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 28262097 - 28262206
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||| |||||||||||||||||||||| |   | |||||||||||  |||||||||||    
T  28262097 aacggtaaaatgtcactaacggtcacgaaacggtaaaatcttaatt-ttactctagtaacttagtaaaatagttaatctcactaatcactaaaagtaatt 28262195  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  28262196 cccaccaaaat 28262206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 21651328 - 21651436
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||| ||||||||||| ||||||| ||||  ||||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  21651328 aacggtaaaatgtcactaacgatcactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaatt 21651425  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  21651426 cccaccaaaat 21651436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 21205553 - 21205657
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||| || |||||| ||||||||| || |||||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  21205553 aacggtaaaatgtcactaacggttaccaaacggtaaaatcttagtt-ttactctagtaacttaatgaaataactattctcactaatcactaaaagtaatt 21205651  T
Q  252 ctcacc 257  Q
    ||||||    
T  21205652 ctcacc 21205657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 261
Target Start/End: Complemental strand, 23981124 - 23981020
Alignment:
Q  156 gtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctca 255  Q
    ||||| |||||| |||||||||||||||| ||||||| || | ||||||||||||||||| |||| ||| |||||||||||||  ||||| |||||| ||    
T  23981124 gtaaattgtcactaacggtcactaaacggtaaaatctcaact-ttactctagtaacttagcaaaataactattctcactaatcactaaaattaattccca 23981026  T
Q  256 ccaaaa 261  Q
    ||||||    
T  23981025 ccaaaa 23981020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 4865896 - 4865987
Alignment:
Q  169 aacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||||||||| ||||||||| || |||||||||||||||||||||| ||| ||| |||||||||  |||||||||||| ||| ||||    
T  4865896 aacggtcactaaacggtaaaatcttagtt-ttactctagtaacttagtaaaataactattttcactaatcactaaaagtaattcccacaaaaa 4865987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 257
Target Start/End: Complemental strand, 25944272 - 25944171
Alignment:
Q  154 cggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattct 253  Q
    |||||||||||||| ||||| |||||||||| ||||||| ||||  ||||||||||||||| | ||| ||| ||||||||||| |  |||||||||||||    
T  25944272 cggtaaaatgtcactaacggccactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaaacactaaaagtaattct 25944175  T
Q  254 cacc 257  Q
    ||||    
T  25944174 cacc 25944171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 1167799 - 1167725
Alignment:
Q  186 aaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||||| || |||||||||||||||||||||| ||| ||||||||||||   |||||||||||||||||||||    
T  1167799 aaaatcttagtt-ttactctagtaacttagtaaaataactattctcactaattactaaaagtaattctcaccaaaa 1167725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 17910128 - 17910237
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||| ||||||||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||| |  ||||| |||||    
T  17910128 aacggtaaaatatgaccaacggttactaaacggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaaacattaaaaataatt 17910226  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  17910227 ctcaccaaaat 17910237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 18777632 - 18777523
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||||||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||||   ||||| |||||    
T  18777632 aacggtaaaatataaccaacggtcactaaacggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaattattaaaaataatt 18777534  T
Q  252 ctcaccaaaat 262  Q
    |||| ||||||    
T  18777533 ctcatcaaaat 18777523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 19406033 - 19406296
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||| ||||||||||||||   |||||  | |||||||||  ||||||||||||| ||||||||||| || || |||||| ||||| |||| |       
T  19406033 aaatgaaaatgtgaggaaatttcctctaagacaaggtttttatagtaagtccccttaatgggcctaactct-aagcttaatggatttaactcattccaac 19406131  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggt---taaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    | ||||| |||||||||||||||  |  | ||||   ||||||||||||    |||||| ||||||   ||||||||||||| ||||| ||| | || |     
T  19406132 ttaattctaaaatgtttctacacaaacgacggtaaaccactaataacggccactaaacgataaaattctaccaacggtcactcaacggtaaactattgac 19406231  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||||||||||||||| |||| |||| ||| ||||||    ||||| |||||||||| ||||    
T  19406232 tattactctagtaacttagcaaaataacggttcccactaaatactaaaaataattctcacaaaaa 19406296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 211
Target Start/End: Original strand, 21907286 - 21907426
Alignment:
Q  75 actcaatggacttaacccatttcttttcaattcaaaa-tgtttctacacccagaatggtatttcactaataacggt---taaacggtaaaatgtcaccaa 170  Q
    ||| ||||||||||| |||||||| ||||| |||||| ||||||||| | || || |||| |||||||||||||||     ||||||||||  |||||||    
T  21907286 acttaatggacttaaaccatttctattcaaatcaaaaatgtttctacccacacaacggtaattcactaataacggtcgaataacggtaaaacatcaccaa 21907385  T
Q  171 cggtcactaaacggaaaaatcttaattattactctagtaac 211  Q
    || |||||||| || ||||| | ||||||||||||| ||||    
T  21907386 cgatcactaaatggtaaaatatcaattattactctactaac 21907426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 28902856 - 28902926
Alignment:
Q  166 accaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaa 236  Q
    ||||||||||||| ||||| ||| | ||||||| ||||||||||||||||||||| |||| ||||||||||    
T  28902856 accaacggtcacttaacggtaaactattaattactactctagtaacttagtaaaataacggttctcactaa 28902926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 28939251 - 28939321
Alignment:
Q  166 accaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaa 236  Q
    ||||||||||||| ||||| ||| | ||||||| ||||||||||||||||||||| |||| ||||||||||    
T  28939251 accaacggtcacttaacggtaaactattaattactactctagtaacttagtaaaataacggttctcactaa 28939321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 22662434 - 22662311
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagt--ccccttaataggcctaactctcaaactcaatggacttaacccatttct 98  Q
    ||||||||||||  ||||||||||||||||| || | |||||||  | ||  ||||| ||| |||||||| || ||||| ||||||||||||||||||||    
T  22662434 aaatgaaagtgtatggaaatttctcataagactaggcttttataggatgttccccctaaatgggcctaaccct-aaacttaatggacttaacccatttct 22662336  T
Q  99 tttcaattc-aaaatgtttctacac 122  Q
     ||||| || |||||||||||||||    
T  22662335 attcaaatcaaaaatgtttctacac 22662311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 1167954 - 1167838
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttcaa 104  Q
    ||||||||||||||||| |||||||||||| |||||||||  | ||| ||||| | ||| |||| ||| | || |||||||||||||||||||| |||||    
T  1167954 gaaagtgtgaggaaatt-ctcataagagtaggtttttatactaggtctccttattgggcttaaccctcca-cttaatggacttaacccatttctattcaa 1167857  T
Q  105 ttc-aaaatgtttctacac 122  Q
      | |||||||||||||||    
T  1167856 accaaaaatgtttctacac 1167838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 16106279 - 16106388
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | | ||||||||||||||||| |||| | |||| | ||| ||||||||||||||||| || | ||||||||||    ||||| |||||    
T  16106279 aacggtaaaatataatcaacggtcactaaacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaaatattaaaaataatt 16106377  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  16106378 ctcaccaaaat 16106388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 21222233 - 21222123
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||   | ||||||||||| ||||| |||||  ||||||  || ||||||||||||||||| || | |||||||||| |  ||||| |||||    
T  21222233 aacggtaaaatactaacaacggtcacttaacggtaaaatactaattaccacactagtaacttagtaaaataatggttctcactaaacactaaaaataatt 21222134  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  21222133 ctcaccaaaat 21222123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 261
Target Start/End: Original strand, 23467008 - 23467192
Alignment:
Q  81 tggacttaacccatttcttttcaattca-aaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtca 176  Q
    ||||||||||||| |||   |||||||  |||||||||||||| |  || ||||  | |||||||||||| |   ||||||||||| ||| |||||||||    
T  23467008 tggacttaacccacttcaactcaattctcaaatgtttctacacactcaacggtaaattactaataacggtcagttaacggtaaaatatcaacaacggtca 23467107  T
Q  177 ctaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |  ||||| |||||  |||||||||| |||||||||||| |||| ||  |||| |||||| |  ||||| ||||||| |||||||    
T  23467108 cataacggtaaaatactaattattaccctagtaacttagcaaaataataattcccactaaacactaaaaataattctaaccaaaa 23467192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 23542911 - 23543018
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||| ||| |||| || ||||| ||| ||| |||||||||||||||| | |||||||||||  || ||| |||||    
T  23542911 aacggtaaaatataaccaacggtcactaa-cggtaaaaact-aattactacactaataacttagtaaaacaagggttctcactaat-tattaaaataatt 23543007  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  23543008 ctcaccaaaat 23543018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 260
Target Start/End: Complemental strand, 32965337 - 32965228
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcact-aatcgataaaagtaat 250  Q
    |||||||||||   ||||||||||||| ||| | ||||| ||||||| ||| ||||||||||||||||| || | |||||||| || |  ||||| ||||    
T  32965337 aacggtaaaatactaccaacggtcacttaacagtaaaatattaattactaccctagtaacttagtaaaataatggttctcactaaaacactaaaaataat 32965238  T
Q  251 tctcaccaaa 260  Q
    ||||||||||    
T  32965237 tctcaccaaa 32965228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 7529537 - 7529619
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcacta 235  Q
    ||||||||||| | |||||| |||||||||||| |||| || ||||| ||| ||||||||||||||||| || | |||||||||    
T  7529537 aacggtaaaatataaccaacagtcactaaacggtaaaaact-aattactacactagtaacttagtaaaataatggttctcacta 7529619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 254
Target Start/End: Original strand, 7729070 - 7729173
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcact-aaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaat 250  Q
    ||||||||||| ||||||| ||||||| |||||| |||||  |||||| ||||| ||||||||||||||| || | ||| | |||| |  ||||||||||    
T  7729070 aacggtaaaatatcaccaatggtcacttaaacggtaaaatactaattactactccagtaacttagtaaaataatggttccccctaaacactaaaagtaat 7729169  T
Q  251 tctc 254  Q
    ||||    
T  7729170 tctc 7729173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 19500489 - 19500596
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||| ||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  19500489 aacggtaaaatataaccaacggtcactaa-cggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 19500585  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  19500586 ctcaccaaaat 19500596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 43443041 - 43442934
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||| ||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||||  |||||| |||||    
T  43443041 aacggtaaaatataaccaacggtcactaa-cggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaattaataaaa-taatt 43442945  T
Q  252 ctcaccaaaat 262  Q
    ||||| |||||    
T  43442944 ctcacaaaaat 43442934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 262
Target Start/End: Original strand, 433099 - 433192
Alignment:
Q  169 aacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    ||||||| || ||||| ||||| | ||||||||| |||||||||||| |||| || |||||||||||| |  ||||| | |||||||| |||||    
T  433099 aacggtcgcttaacggtaaaatatcaattattaccctagtaacttagcaaaataatgattctcactaaacactaaaaattattctcacaaaaat 433192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 3674513 - 3674597
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaa 236  Q
    |||||||||||   ||||||||||||| ||||| |||||  |||||| ||| ||||||| ||||||||| || | ||||||||||    
T  3674513 aacggtaaaatactaccaacggtcacttaacggtaaaatactaattactaccctagtaatttagtaaaataagggttctcactaa 3674597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 4865753 - 4865855
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    ||||||||||||| |||| ||||||||||||||| ||||||  |  |||||  |||| | |||||||| |||  ||| ||||||| |||||||||||| |    
T  4865753 aaatgaaagtgtgtggaattttctcataagagtaggtttttggactaagtctacttattgggcctaaccctc-cacttaatggacctaacccatttctat 4865851  T
Q  101 tcaa 104  Q
    ||||    
T  4865852 tcaa 4865855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 17471227 - 17471120
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||| ||| |||| || ||| | ||| ||||||||||||||||| || | ||||||||||   || ||| |||||    
T  17471227 aacggtaaaatataaccaacggtcactaa-cggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaa-atattaaaataatt 17471131  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  17471130 ctcaccaaaat 17471120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 22366123 - 22366016
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||| ||||| |||| | |||| | ||| |||||||||||| |||| || | ||||||| |||  |||||| |||||    
T  22366123 aacggtaaaatataaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagaaaaataagggttctcaccaattaataaaa-taatt 22366027  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  22366026 ctcaccaaaat 22366016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 22882722 - 22882639
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaat 237  Q
    ||||||||||| | ||||||||||||||| ||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||||    
T  22882722 aacggtaaaatataaccaacggtcactaa-cggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaat 22882639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 34939903 - 34939967
Alignment:
Q  155 ggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaa 220  Q
    |||||||| | ||||||||||||||||||| |||| | |||| | ||| |||||||||||||||||    
T  34939903 ggtaaaatataaccaacggtcactaaacggtaaaaac-taatcactacactagtaacttagtaaaa 34939967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 108; Significance: 3e-54; HSPs: 5)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 80 - 261
Target Start/End: Complemental strand, 131926 - 131742
Alignment:
Q  80 atggacttaacccatttcttttcaattca-aaatgtttctacacccagaatggtatttcactaataacggttaaa---cggtaaaatgtcaccaacggtc 175  Q
    ||||||||||||||||||| ||||| ||  ||||||||||||||  | || ||||||||||||||||||||||||   ||||||||||||||| ||||||    
T  131926 atggacttaacccatttctattcaactcgcaaatgtttctacacatacaacggtatttcactaataacggttaaataacggtaaaatgtcaccgacggtc 131827  T
Q  176 actaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  131826 actaaacggtaaaatcttaatt-ttactctagtaacttagtaaaacaacggttctcactaatcactaaaagtaattctcaccaaaa 131742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 25925 - 26189
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  | |||||||||  | ||||||| ||| |||||||| || || || |||||| |||| ||||| |       
T  25925 aaatgaaagtgtgaggaaatttcctctaagacaaggtttttatagtatgtcccctaaatgggcctaaccctaaagcttaatggatttaatccattccaac 26024  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    ||||||| ||||||||||||||| || || ||||  |||||||||||| | ||   ||||||||||   ||||||||||||| ||||| ||||| |||||    
T  26025 tcaattctaaaatgtttctacacacacaacggtaaatcactaataacgatcaattaacggtaaaattctaccaacggtcacttaacggtaaaatattaat 26124  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    || || ||| |||||||||||||| |||| |||||||||| |  ||||| |||||||||||||||    
T  26125 tactaatctcgtaacttagtaaaataacggttctcactaaacactaaaaataattctcaccaaaa 26189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 261
Target Start/End: Original strand, 12549 - 12811
Alignment:
Q  3 atgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttc 102  Q
    |||||||||||||||||||||   |||||  | |||||||||  | ||||||| |||  ||||||| || || || |||||| |||||||||| |   ||    
T  12549 atgaaagtgtgaggaaatttcctctaagacaaggtttttatactatgtcccctaaatgcgcctaaccctaaagcttaatggatttaacccattccaactc 12648  T
Q  103 aattc-aaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatta 198  Q
    ||||| ||||||||||||||| || || ||||  |||||||||||| | ||   ||||||||||   ||||||||||| | ||||| ||||| |||||||    
T  12649 aattctaaaatgtttctacacacacaacggtaaatcactaataacgatcaattaacggtaaaattctaccaacggtcagttaacggtaaaatattaatta 12748  T
Q  199 ttactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
     || |||||||||||||||||| |||| |||||||||| |  ||||| |||||||||||||||    
T  12749 ctaatctagtaacttagtaaaataacggttctcactaaacactaaaaataattctcaccaaaa 12811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 16394 - 16658
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  | |||||||||  | ||||||| ||| |||||||| || || || |||||| |||| ||||| |       
T  16394 aaatgaaagtgtgaggaaatttcctctaagacaaggtttttatagtatgtcccctaaatgggcctaaccctaaagcttaatggatttaatccattccaac 16493  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    ||||||| ||||||||||||||| || || ||||  |||||||||||| | ||   ||||||||||   ||||||||||||| ||||| ||||| |||||    
T  16494 tcaattctaaaatgtttctacacacacaacggtaaatcactaataacgatcaattaacggtaaaattctaccaacggtcacttaacggtaaaatattaat 16593  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    || || ||| |||||||||||||| || | |||||||||| |  ||||| |||||||||||||||    
T  16594 tactaatctcgtaacttagtaaaataaaggttctcactaaacactaaaaataattctcaccaaaa 16658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 167952 - 167845
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | | ||||| |||  |||||| |||||    
T  167952 aacggtaaaatataaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggtcctcaccaattaataaaa-taatt 167856  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  167855 ctcaccaaaat 167845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 2 - 236
Target Start/End: Complemental strand, 11407 - 11173
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| |||||| ||||||| |||||||| ||| | || |||||||||||||||||||| ||    
T  11407 aatgaaagtgtgaggaaatttctcataagtgtaggtttttataccaagtctccttaatgggcctaaccctcca-cttaatggacttaacccatttctatt 11309  T
Q  102 caattca-aaatgtttctacacccagaatggtatttcactaataacggttaa--acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatta 198  Q
    |   ||  |||||||||||||| |  || |||| ||||||||||||||| ||  |||||||||| ||||||||||||||||||| | ||||||||||||     
T  11308 cgcatctcaaatgtttctacactct-aacggtaattcactaataacggtcaataacggtaaaatatcaccaacggtcactaaacagtaaaatcttaatt- 11211  T
Q  199 ttactctagtaacttagtaaaacaacgattctcactaa 236  Q
    |||||||||||||||||||||||||| |||||||||||    
T  11210 ttactctagtaacttagtaaaacaactattctcactaa 11173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 1809 - 2060
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||  | ||| |   ||| |||||||| |||||||| |||||||||||||||||||| |    
T  1809 aaatgaaagtgtgaggaaatttctcataagagtaggtttttatagtatgtctcacaaatgggcctaaccctcaaact-aatggacttaacccatttctat 1907  T
Q  101 tcaattcaaaatgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcactaaacgg-aaaaatcttaattat 199  Q
    |||  ||||||||||||||||| |  |  |||| |||||||||||||        ||||||| ||||||||||||||||||||| |||||||| |||| |    
T  1908 tcacatcaaaatgtttctacacactaaccggtaattcactaataacg--------gtaaaatatcaccaacggtcactaaacggtaaaaatctaaatt-t 1998  T
Q  200 tactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||| ||||||||||||||||||| ||| ||||||||  |||||| ||||||||||||||    
T  1999 tactcttgtaacttagtaaaacaacggttcccactaatcactaaaagcaattctcaccaaaa 2060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 9481 - 9744
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  | ||||||||| |||||||||||||| ||||||||| | || || |||||| ||||||||||||       
T  9481 aaatgaaagtgtgaggaaatttcctctaagataaggtttttatagcaagtccccttaatgggcctaactataaagcttaatggatttaacccatttcaac 9580  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggttaaa---cggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    |||| || ||||||||||||||| || ||   || | |||||||||| || |||   ||||||||| | ||||||||||||||||||| |||| ||||||    
T  9581 tcaaatctaaaatgtttctacacacacaacaataat-cactaataacagtgaaataacggtaaaatattaccaacggtcactaaacggtaaaaccttaat 9679  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  9680 tattactctagtaacttagtaaaacaacggttctcactaatcactaaaagtaattctcaccaaaa 9744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 34158 - 34412
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtcc-ccttaataggcctaactctcaaactcaatggacttaacccatttctt 99  Q
    |||||||||||||||||||||||   |||||  | |||||||||  |||||| ||||||| ||||||||||||||||| |||||| ||||||||||||      
T  34158 aaatgaaagtgtgaggaaatttcctctaagacaaggtttttatagtaagtccgccttaatgggcctaactctcaaacttaatggatttaacccatttcaa 34257  T
Q  100 ttcaattc-aaaatgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatta 198  Q
     |||| || ||||||||||||||| || |||||||   |||||||||||        ||||||| ||||||||||||||||||||| |||||  ||||||    
T  34258 ctcaaatctaaaatgtttctacacgcacaatggtaaaacactaataacg--------gtaaaatatcaccaacggtcactaaacggtaaaatactaatta 34349  T
Q  199 ttactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
     || |||||||||||||||||| |||| ||||||||||||  |||||||||||||||||||||    
T  34350 ctaatctagtaacttagtaaaataacggttctcactaatcactaaaagtaattctcaccaaaa 34412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 6600 - 6339
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||||||||||||||||| |  ||| |||||||| ||||||| |||||||  ||||||| ||| |  | ||||||||||||||||||||  |    
T  6600 aatgaaagtgtgaggaaatttctcatgaatgtaggtttttatgtcaagtctccttaatgtgcctaaccctccacat-aatggacttaacccatttctagt 6502  T
Q  102 caattcaaaa-tgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    |||  ||||| ||||||||||| |  |  |||| ||||||||||||||| ||   |||||||||| |||| |||||||||||||||| ||||||||||||    
T  6501 caaaccaaaaatgtttctacactctaaccggtaattcactaataacggtcaagtaacggtaaaatatcactaacggtcactaaacggtaaaatcttaatt 6402  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
     |||||||| || ||||||||||||||| |||||||||| |  ||||| |||||||||||||||    
T  6401 -ttactctaataccttagtaaaacaacggttctcactaaccactaaaattaattctcaccaaaa 6339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 435 - 327
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||| ||||||||| |||||||||||||| | |||||||||||| ||||||||||||||| ||||||||||| ||| ||||||||  |||||||||||    
T  435 aacggtcaaatgtcactaacggtcactaaacagtaaaatcttaatt-ttactctagtaacttggtaaaacaacggttcccactaatcactaaaagtaatt 337  T
Q  252 ctcaccaaaa 261  Q
    ||||||||||    
T  336 ctcaccaaaa 327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 10431 - 10694
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||| |||||| |||||||   |||||  | |||||||||||||||||| ||||| |||||||||||||| || |||||| |||||||||||        
T  10431 aaatgaaaatgtgagcaaatttcctctaagacaaggtttttatatcaagtccctttaatgggcctaactctcaa-cttaatggatttaacccatttgaac 10529  T
Q  101 tcaattcaaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    |||||  ||||||||||||||| || || |||| |||| |||||||||| ||   || ||||||| |||| ||| |||||||||||| ||||  ||||||    
T  10530 tcaatctaaaatgtttctacacacacaacggtaattcagtaataacggtcaactaacagtaaaatatcactaacagtcactaaacggtaaaactttaatt 10629  T
Q  198 att-actctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||| ||||||||||||||||||||||||| ||||||| ||||  ||||||||||||| |||||||    
T  10630 atttactctagtaacttagtaaaacaacggttctcaccaatcactaaaagtaattcttaccaaaa 10694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 91; Significance: 4e-44; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 85826 - 86090
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   ||||   | |||||||||  ||||||||||||| ||||||||||||||||| |||||| ||||| ||||||       
T  85826 aaatgaaagtgtgaggaaatttcctctaagtcaaggtttttatagtaagtccccttaatgggcctaactctcaaacttaatggatttaactcatttcaac 85925  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    || | || ||||||||||||||| || || |||| ||||||||||||||||||   ||| |||||| |||||||| |||||||||||| |||||  ||||    
T  85926 tccaatctaaaatgtttctacacacacaacggtaattcactaataacggttaattaacgataaaatatcaccaacagtcactaaacggtaaaatactaat 86025  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
     | ||||||| ||||||||||||| | || || ||||||||   |||||||||||||||||||||    
T  86026 cactactctaataacttagtaaaatagcggttttcactaattactaaaagtaattctcaccaaaa 86090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 159795 - 160058
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||| ||||||||   |||||  | |||||||||  | ||||||||||| |||||||| || || || |||||| |||||||||| |       
T  159795 aaatgaaagtgtgacgaaatttcctctaagacaaggtttttatagtatgtccccttaatgggcctaaccctaaagcttaatggatttaacccattccaac 159894  T
Q  101 tcaa-ttcaaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    |||| || ||||||||||||||| ||  | ||||  |||| ||||||||| ||   |||||||||    ||||||||||||| | ||| ||||| |||||    
T  159895 tcaaatttaaaatgtttctacacaca--acggtaaatcaccaataacggtcaactaacggtaaaacactaccaacggtcacttatcggtaaaatattaat 159992  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    ||||||||||||||||||| |||| |||| ||| ||||||    ||||| |||| |||||||||||    
T  159993 tattactctagtaacttagcaaaataacggttcccactaaatactaaaaataatcctcaccaaaat 160058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 112299 - 112035
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  | |||||| ||  | || |||||||| ||||||| ||||||| | ||||||  |||| ||||||       
T  112299 aaatgaaagtgtgaggaaatttcctctaagacaaggtttttgtagtaggttcccttaatgggcctaattctcaaatttaatggatataactcatttcaac 112200  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggttaaa---cggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    | || || ||||||||||||||| ||  | | || ||||||||||||||| |||   ||||||||| |  |||||||||||||||||| |||| ||||||    
T  112199 taaaatctaaaatgtttctacacacaccacgataattcactaataacggtcaaataacggtaaaatatttccaacggtcactaaacggtaaaaccttaat 112100  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||||||||||||||||||||||||  ||||||||||||  |||||||||||||||||||||    
T  112099 tattactctagtaacttagtaaaacaacagttctcactaatcactaaaagtaattctcaccaaaa 112035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0816 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0816
Description:

Target: scaffold0816; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 2818 - 2557
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||||||||||||||||||| ||||||||| ||||    ||| |   | | |||||||| ||||| || |||||||||||||||||||  ||    
T  2818 aatgaaagtgtgaggaaatttctcataaaagtatgtttatatagtgtgtctcacaattgggcctaaccctcaa-cttaatggacttaacccatttccatt 2720  T
Q  102 caattcaaaatg-tttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    |||  |||||   ||||||||| |  |  |||| ||  ||||||||||| ||   ||||||||||||||| |||||||||||||||| ||||||||| ||    
T  2719 caaaccaaaaaaatttctacactctaaccggtaatttgctaataacggtcaagtaacggtaaaatgtcactaacggtcactaaacggtaaaatcttagtt 2620  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
     ||||||||||||||||||||||||||| ||||||||||||  |||||||||||||| ||||||    
T  2619 -ttactctagtaacttagtaaaacaacggttctcactaatcactaaaagtaattctcgccaaaa 2557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 82; Significance: 9e-39; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 164708 - 164966
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||||||||||||||||| ||||||||||| ||||    ||| |   | | || ||||| ||||| || |||||||||||||||||||| ||    
T  164708 aatgaaagtgtgaggaaatttctcatgagagtatgtttatatagtgtgtctcacaattgggtctaaccctcaa-cttaatggacttaacccatttctatt 164806  T
Q  102 caattcaaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatta 198  Q
    ||||   ||||||||||||||    |  |||| ||||||||||||||| ||   ||||||||||||||| ||| |||||||||||| ||||||||| ||     
T  164807 caatc--aaatgtttctacactataaccggtaattcactaataacggtcaagtaacggtaaaatgtcactaacagtcactaaacggtaaaatcttagtt- 164903  T
Q  199 ttactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||||||||||||||| ||| ||||||||||||   |||||||||||| ||||||||    
T  164904 ttactctagtaacttagtaaaataactattctcactaataactaaaagtaattcccaccaaaa 164966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 165881 - 165778
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| |||| |||| ||| ||||||| ||||||| ||||  ||||||||||||||| | ||| ||| ||||||||||| |  |||||||||||    
T  165881 aacggtaaaatatcactaacgatcattaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaaacactaaaagtaatt 165784  T
Q  252 ctcacc 257  Q
    ||||||    
T  165783 ctcacc 165778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 260
Target Start/End: Complemental strand, 116153 - 116045
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| ||| ||| ||||||| ||||| |||||  |||||| ||  |||||||||||| |||| || | |||||||||| |  ||||| |||||    
T  116153 aacggtaaaatatcaacaatggtcacttaacggtaaaatactaattactaaactagtaacttagcaaaataatggttctcactaaacactaaaaataatt 116054  T
Q  252 ctcaccaaa 260  Q
    |||||||||    
T  116053 ctcaccaaa 116045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1867 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 638 - 898
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||||||||||| ||||||||||||||||| ||||    ||| |   | | |||||||| ||||| || |||||||||||||||||||| ||    
T  638 aatgaaagtgtgaggaaattactcataagagtatgtttatatagtgtgtctcacaattgggcctaaccctcaa-cttaatggacttaacccatttctatt 736  T
Q  102 caattcaaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatta 198  Q
     || | ||||||||||||||| |  |  |||| || |||||||| ||| ||   ||||||||||||||| |||||||||||||||| ||||||||| ||     
T  737 aaaataaaaatgtttctacactctaaccggtaattaactaataatggtcaagtaacggtaaaatgtcactaacggtcactaaacggtaaaatcttagtt- 835  T
Q  199 ttactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||| ||||||||||||| ||  |||||||||||||  |||||||||||  ||||||||    
T  836 ttactctaataacttagtaaaataattattctcactaatcactaaaagtaatttccaccaaaa 898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 2 - 212
Target Start/End: Original strand, 71109 - 71322
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    |||||||||||| ||||||||||||||||| ||   |||||||  | ||||| | ||  |||||||| ||||| || ||||||| |||||||||||| ||    
T  71109 aatgaaagtgtgtggaaatttctcataagactagacttttatagtatgtcccataaacgggcctaaccctcaa-cttaatggacgtaacccatttctatt 71207  T
Q  102 caattcaaaa-tgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    ||| |||||| ||||||||||| || || |||| ||||||||||||||| ||   |||||||||| ||||||||||||||||||||| |||||  |||||    
T  71208 caaatcaaaaatgtttctacacacacaacggtaattcactaataacggtcaattaacggtaaaatatcaccaacggtcactaaacggtaaaatactaatt 71307  T
Q  198 attactctagtaact 212  Q
    |||||||||||||||    
T  71308 attactctagtaact 71322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 31540 - 31805
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  | |||||||||  ||||||||||||| ||||||||||| || || |||||| |||||||||| |       
T  31540 aaatgaaagtgtgaggaaatttcctctaagacaaggtttttatagtaagtccccttaatgggcctaactctaaagcttaatggatttaacccattccaac 31639  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacgg---ttaaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    | ||||| ||||||||||||||| || || ||||   ||||||| | ||    |||||||||||||   ||||||||||||| ||| | ||| | || ||    
T  31640 ttaattctaaaatgtttctacacacacaacggtaaaccactaattaaggccactaaacggtaaaattctaccaacggtcactcaacagtaaactattgat 31739  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    ||||||||||||||||||| |||| |||| ||| ||| ||   || ||| ||||||||||||||||    
T  31740 tattactctagtaacttagcaaaataacggttcccacaaaataattaaaataattctcaccaaaat 31805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 262
Target Start/End: Original strand, 15360 - 15616
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttcaa 104  Q
    ||||||||||||||||| ||||||| |||| |||||||||  ||||| ||||| | |||||||| ||| | || |||||||||||| ||||||| ||||     
T  15360 gaaagtgtgaggaaatt-ctcataa-agtaggtttttatactaagtctccttattgggcctaaccctcca-cttaatggacttaactcatttctattcac 15456  T
Q  105 ttca-aaatgtttctacacccagaatggtatttcactaataacggt-ta--aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatt 200  Q
     ||  |||||| ||||||| |  |  |||| ||||||||||||||| ||  |||||||||||||||| |||||||||||||||| ||||||||| || ||    
T  15457 atctcaaatgtctctacactctaaccggtaattcactaataacggtctagtaacggtaaaatgtcactaacggtcactaaacggtaaaatcttagtt-tt 15555  T
Q  201 actctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    |||||||||||||||| ||| ||| |||||||||| ||  |||||||||||| |||||||||    
T  15556 actctagtaacttagt-aaataactattctcactattcactaaaagtaattcccaccaaaat 15616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 5054 - 5314
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||||||||| ||| |||||||||  |||||  |||| | |||| ||| ||  | || |||||||||||| ||||||| |    
T  5054 aaatgaaagtgtgaggaaatttctcataagtgtaggtttttatactaagtcttcttattgggccaaacccttca-cttaatggacttaacacatttctat 5152  T
Q  101 tcaattcaaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    |||  |||||||||||||||||  | || ||||||  |||||||||| | ||   ||  ||||||||||| |||||||| ||| ||| ||||||||| ||    
T  5153 tcacatcaaaatgtttctacacatacaacggtatta-actaataacgatcaagtaacaataaaatgtcactaacggtcaataa-cggtaaaatcttagtt 5250  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
     |||||||||||||||||||||| ||| |||||| ||| ||  |||||||||||| |||||||||    
T  5251 -ttactctagtaacttagtaaaataactattctccctactcactaaaagtaattcccaccaaaat 5314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 9668 - 9928
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||||||||| ||| |||||||||  |||||  |||| | |||| ||| ||  | || |||||||||||| ||||||| |    
T  9668 aaatgaaagtgtgaggaaatttctcataagtgtaggtttttatactaagtcttcttattgggccaaacccttca-cttaatggacttaacacatttctat 9766  T
Q  101 tcaattcaaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    |||  |||||||||||||||||  | || ||||||  |||||||||| | ||   ||  ||||||||||| |||||||| ||| ||| ||||||||| ||    
T  9767 tcacatcaaaatgtttctacacatacaacggtatta-actaataacgatcaagtaacaataaaatgtcactaacggtcaataa-cggtaaaatcttagtt 9864  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
     |||||||||||||||||||||| ||| |||||| ||| ||  |||||||||||| |||||||||    
T  9865 -ttactctagtaacttagtaaaataactattctccctactcactaaaagtaattcccaccaaaat 9928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 144 - 253
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||||||| |||| | |||| | ||| ||| ||||||| ||||| || | ||||||||||    ||||| |||||    
T  144 aacggtaaaatataaccaacggtcactaaacggtaaaaac-taatcactacactaataacttaataaaataagggttctcactaaatattaaaaataatt 242  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  243 ctcaccaaaat 253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 7663 - 7923
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||||||||| ||| |||||||||  |||||  |||| | |||| ||| ||  | || |||||||||||| ||||||| |    
T  7663 aaatgaaagtgtgaggaaatttctcataagtgtaggtttttatactaagtcttcttattgggccaaacccttca-cttaatggacttaacacatttctat 7761  T
Q  101 tcaattcaaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    |||  |||||||||||||||||  | || ||||||  |||||||||| | ||   ||  ||||||||||| |||||||| ||| ||| ||||||||| ||    
T  7762 tcacatcaaaatgtttctacacatacaacggtatta-actaataacgatcaagtaacaataaaatgtcactaacggtcaataa-cggtaaaatcttagtt 7859  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
     |||||||||||||||||||||| ||| |||||| ||| ||  |||||||||||| |||||||||    
T  7860 -ttactctagtaacttagtaaaataactattctccctactcactaaaagtaattcccaccaaaat 7923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 3008 - 3117
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||||||| |||| | |||| | ||| ||| ||||||| ||||| || | ||||||||||    ||||| |||||    
T  3008 aacggtaaaatataaccaacggtcactaaacggtaaaaac-taatcactacactaataacttaataaaataagggttctcactaaatattaaaaataatt 3106  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  3107 ctcaccaaaat 3117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 261
Target Start/End: Complemental strand, 4998 - 4750
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttcaa 104  Q
    ||||||||||||||||| |||||||||||| |||||||||  ||||| ||||| |||||||||| ||| | || |||||||||||||||||||| |||||    
T  4998 gaaagtgtgaggaaatt-ctcataagagtaggtttttatactaagtctccttattaggcctaaccctcca-cttaatggacttaacccatttctattcaa 4901  T
Q  105 ttcaaaa--tgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattat 199  Q
      |||||  ||||||||||| |  | |  || ||||||||||||||| ||   |||||||||| ||||          ||||||| ||||||||| || |    
T  4900 accaaaaaatgtttctacactctaactaataattcactaataacggtcaagtaacggtaaaatatcac----------taaacggtaaaatcttagtt-t 4812  T
Q  200 tactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||||||||||||||||||| ||||||||||||  ||||| |||||| ||||||||    
T  4811 tactctagtaacttagtaaaacaacggttctcactaatcactaaaaataattcccaccaaaa 4750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 262
Target Start/End: Complemental strand, 8491 - 8398
Alignment:
Q  169 aacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    |||||||||| || || |||||  |||||| || |||||||||||||||||| |||||||||| |||| |  ||||| ||||  ||||||||||    
T  8491 aacggtcacttaatggtaaaatactaattactattctagtaacttagtaaaataacgattctctctaaacactaaaaataatattcaccaaaat 8398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 8635 - 8486
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||| ||||||||||||   |||||  | ||||||| |  | ||||||| ||| |||||||| || || || | ||||||||||||| | |  |    
T  8635 aaatgaaagtttgaggaaatttcatctaagacaaggtttttagagtatgtcccctaaatgggcctaaccctaaagcttagtggacttaacccactccaat 8536  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggt 149  Q
    ||||||| ||||||||||||||| |  |||||||  | ||||||||||||    
T  8535 tcaattctaaaatgtttctacactccaaatggtaaattactaataacggt 8486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 261
Target Start/End: Original strand, 38796 - 39057
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttata----tcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    ||||||||||||||||| |||||||||||| |||||||||    | ||||| ||||| | |||||| | ||| | || ||||||| ||||  |||||| |    
T  38796 gaaagtgtgaggaaatt-ctcataagagtaggtttttatactaattaagtctccttattgggcctagccctcca-cttaatggacgtaactgatttctat 38893  T
Q  101 tcaattcaaaa-tgtttctacacccagaatggtatttcactaataacggttaaa---cggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    ||||  ||||| ||||||||||| |  |  |||| |||| |||||||||| |||   |||||||||||||| ||||||||| |||||| ||||||||| |    
T  38894 tcaaaccaaaaatgtttctacactctaaccggtaattcattaataacggtcaaataacggtaaaatgtcactaacggtcaccaaacggtaaaatcttagt 38993  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    | |||||||||||||||||||||| ||| ||||||||||||   |||||||||||| ||||||||    
T  38994 t-ttactctagtaacttagtaaaataactattctcactaattactaaaagtaattcccaccaaaa 39057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 69; Significance: 5e-31; HSPs: 4)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 31704 - 31940
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||||||||||||| |||| ||||    ||| |   ||| |  ||||| ||||| || ||||||||||||  |||||| |    
T  31704 aaatgaaagtgtgaggaaatttctcataagagtaggtttatatagtgtgtctcacaaatggttctaaccctcaa-cttaatggacttaacgtatttctat 31802  T
Q  101 tcaattcaaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    |||  |||||||||||||||||  | |||||||| |||||||||||||| ||   ||||||||   ||  |||| |||||||||||| ||||||||||||    
T  31803 tcacatcaaaatgtttctacacatacaatggtatatcactaataacggtcaattaacggtaaaccatcttcaacagtcactaaacggtaaaatcttaatt 31902  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaa 236  Q
     |||||||||||||||||||||| ||| || ||||||||    
T  31903 -ttactctagtaacttagtaaaaaaactatgctcactaa 31940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 47302 - 47066
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||||||||||||| |||| ||||    ||| |   ||| |  ||||| ||||| || ||||||||||||  |||||| |    
T  47302 aaatgaaagtgtgaggaaatttctcataagagtaggtttatatagtgtgtctcacaaatggttctaaccctcaa-cttaatggacttaacgtatttctat 47204  T
Q  101 tcaattcaaaatgtttctacacccagaatggtatttcactaataacggttaa---acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaatt 197  Q
    |||  |||||||||||||||||  | |||||||| |||||||||||||| ||   ||||||||   ||  |||| |||||||||||| ||||||||||||    
T  47203 tcacatcaaaatgtttctacacatacaatggtatatcactaataacggtcaattaacggtaaaccatcttcaacagtcactaaacggtaaaatcttaatt 47104  T
Q  198 attactctagtaacttagtaaaacaacgattctcactaa 236  Q
     |||||||||||||||||||||| ||| || ||||||||    
T  47103 -ttactctagtaacttagtaaaaaaactatgctcactaa 47066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 22005 - 22255
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||    ||| |   ||| |||||||| ||||| || || |||||||||| |||||| |    
T  22005 aaatgaaagtgtgaggaaatttctcataggagtaggtttatatagtgtgtctcacaaatgggcctaaccctcaa-cttaacggacttaacctatttctat 22103  T
Q  101 tcaattcaaaatgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattatt 200  Q
    |||  ||||||||||||| |||  | || ||||| |||||||||||||| ||||         || ||||||||||| |||||| ||||| |||||| ||    
T  22104 tcacatcaaaatgtttcttcacatacaacggtatatcactaataacggtaaaaca--------tctccaacggtcacaaaacggtaaaatattaatt-tt 22194  T
Q  201 actctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    | |||||||||||||||||||||| |  |||||||| |  |||| ||| | ||||||||||    
T  22195 aatctagtaacttagtaaaacaactacgctcactaaccactaaaggtactcctcaccaaaa 22255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 27603 - 27516
Alignment:
Q  169 aacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcac 256  Q
    |||||||||||||||| |||||  |||||| ||| ||| ||||||||||||||||| |||||||||||||  ||||||| | ||||||    
T  27603 aacggtcactaaacggtaaaatactaattactacactaataacttagtaaaacaactattctcactaatccttaaaagtgactctcac 27516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 4802 - 4693
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| |||| |||||||||||||||| ||||||| |||| |||||||||||||||||||||| ||| |||||||||||||  |||||||||||    
T  4802 aacggtaaaatatcactaacggtcactaaacggtaaaatctcaatt-ttactctagtaacttagtaaaataactattctcactaatcactaaaagtaatt 4704  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  4703 cccaccaaaat 4693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 67; Significance: 8e-30; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 254478 - 254369
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||| ||||||||| |||||||||||||||| ||||||||| || |||||||||||||||||||||| ||| |||||||||||||  |||||||||||    
T  254478 aacggtcaaatgtcactaacggtcactaaacggtaaaatcttagtt-ttactctagtaacttagtaaaataactattctcactaatcactaaaagtaatt 254380  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  254379 cccaccaaaat 254369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 261084 - 260975
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||| ||||||||| |||||||||||||||| ||||||||| || |||||||||||||||||||||| ||| |||||||||||||  |||||||||||    
T  261084 aacggtcaaatgtcactaacggtcactaaacggtaaaatcttagtt-ttactctagtaacttagtaaaataactattctcactaatcactaaaagtaatt 260986  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  260985 cccaccaaaat 260975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 122809 - 122701
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||| ||||| |||||||||||||||| ||||||| |||| |||||||||||||||||||||| | | |||||||||||||  ||| |||||||    
T  122809 aacggtaaaaagtcactaacggtcactaaacggtaaaatctcaatt-ttactctagtaacttagtaaaatagctattctcactaatcactaagagtaatt 122711  T
Q  252 ctcaccaaaa 261  Q
    | ||| ||||    
T  122710 cccactaaaa 122701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 15082 - 14974
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||||| || |||||||||||||||||||||||||| ||||| ||||| |  ||||||||| |    
T  15082 aacggtaaaatgtcactaacggtcactaaacggtaaaatcttagtt-ttactctagtaacttagtaaaacaactattcttactaaccactaaaagtaact 14984  T
Q  252 ctcaccaaaa 261  Q
    ||||||||||    
T  14983 ctcaccaaaa 14974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 36562 - 36454
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||| ||| ||||||||||| |  |||||||||||    
T  36562 aacggtaaaatatcactaacggtcactaaacggtaaaatctcaatt--tactctagtaacttagtaaaataactattctcactaaacactaaaagtaatt 36465  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  36464 cccaccaaaat 36454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 2609 - 2716
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  2609 aacggtaaaatgtaaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 2705  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  2706 ctcaccaaaat 2716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 48771 - 48880
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||| || ||||| |||||||||||||||| ||| |||||||||||||  |||||||||||    
T  48771 aacggtaaaatgtcagcaacgttcactaaacggtaaaatcttagtt-ttactttagtaacttagtaaaataactattctcactaatcactaaaagtaatt 48869  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  48870 cccaccaaaat 48880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 62219 - 62328
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||| || ||||| |||||||||||||||| ||| |||||||||||||  |||||||||||    
T  62219 aacggtaaaatgtcagcaacgttcactaaacggtaaaatcttagtt-ttactttagtaacttagtaaaataactattctcactaatcactaaaagtaatt 62317  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  62318 cccaccaaaat 62328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 48640 - 48756
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttcaa 104  Q
    ||||||||||||||| | |||||||||||| ||||| |||  ||||| ||||| | |||||||| ||| | || |||||||||||||||||||| |||||    
T  48640 gaaagtgtgaggaaact-ctcataagagtaggttttcatactaagtctccttattgggcctaaccctcca-cttaatggacttaacccatttctattcaa 48737  T
Q  105 ttc-aaaatgtttctacac 122  Q
      | |||||||||||||||    
T  48738 accaaaaatgtttctacac 48756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 62088 - 62204
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttcaa 104  Q
    ||||||||||||||| | |||||||||||| ||||| |||  ||||| ||||| | |||||||| ||| | || |||||||||||||||||||| |||||    
T  62088 gaaagtgtgaggaaact-ctcataagagtaggttttcatactaagtctccttattgggcctaaccctcca-cttaatggacttaacccatttctattcaa 62185  T
Q  105 ttc-aaaatgtttctacac 122  Q
      | |||||||||||||||    
T  62186 accaaaaatgtttctacac 62204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 261
Target Start/End: Complemental strand, 30897 - 30789
Alignment:
Q  151 aaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaat 250  Q
    ||||||||||||||||| |||||||||||||||| ||||||| ||||  ||||||||||||||| | ||| ||| |||||||||||||  ||||||||||    
T  30897 aaacggtaaaatgtcactaacggtcactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaat 30800  T
Q  251 tctcaccaaaa 261  Q
    || ||||||||    
T  30799 tcccaccaaaa 30789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 259
Target Start/End: Complemental strand, 19567 - 19461
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| || | |||||||||||||||||||||| ||| |||||||||||||  ||| |||||||    
T  19567 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaact-ttactctagtaacttagtaaaataactattctcactaatcactaagagtaatt 19469  T
Q  252 ctcaccaa 259  Q
    | ||||||    
T  19468 cccaccaa 19461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 261
Target Start/End: Original strand, 41947 - 42055
Alignment:
Q  151 aaacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaat 250  Q
    ||||||||||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| |||||||||||||  ||||||||||    
T  41947 aaacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactattctcactaatcactaaaagtaat 42044  T
Q  251 tctcaccaaaa 261  Q
    || ||||||||    
T  42045 tcccaccaaaa 42055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 36718 - 36612
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| |||| |||| ||||||| ||  ||||||| | || ||||||||||||||||||||||  || ||||||||||||  || ||| |||||    
T  36718 aacggtaaaatatcactaacgatcactaa-cgataaaatctaagtt-ttactctagtaacttagtaaaa-tactattctcactaat-tattaaaataatt 36623  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  36622 ctcaccaaaat 36612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 6019 - 5910
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| ||| |||||||||| ||||||||| || | |||||||||||||||||||||| ||| |||||||||||||  |||||||||||    
T  6019 aacggtaaaatgtcactaacagtcactaaactgaaaaatctcaact-ttactctagtaacttagtaaaataactattctcactaatcactaaaagtaatt 5921  T
Q  252 ctcaccaaaat 262  Q
      |||||||||    
T  5920 tccaccaaaat 5910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 156 - 262
Target Start/End: Original strand, 30736 - 30841
Alignment:
Q  156 gtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctca 255  Q
    |||||||||||| |||||||||||||||| ||||||| |||| |||||||||||| ||||||||| ||| |||||| ||||||  |||||||||||| ||    
T  30736 gtaaaatgtcactaacggtcactaaacggtaaaatctcaatt-ttactctagtaatttagtaaaataactattctctctaatcactaaaagtaattccca 30834  T
Q  256 ccaaaat 262  Q
    |||||||    
T  30835 ccaaaat 30841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 654 - 761
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| |||||||||||||||  | |||||   |||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  654 aacggtaaaatgtaaccaacggtcactaacagtaaaaac--taatcactaccctagtaacttagtaaaataagggttctcactaat-tattaaaataatt 750  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  751 ctcaccaaaat 761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 20807 - 20916
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| ||||||||||||| || ||||||| || | ||||||||| |||||||||||| ||| |||||||||||||  |||||||||||    
T  20807 aacggtaaaatgtcactaacggtcactaaatggtaaaatctcaact-ttactctagcaacttagtaaaataactattctcactaatcactaaaagtaatt 20905  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  20906 cccaccaaaat 20916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 79 - 262
Target Start/End: Original strand, 111 - 289
Alignment:
Q  79 aatggacttaacccattt-cttttcaattcaaaatgtttctacacccagaatggtatttcactaataacggttaaacggtaaaatgtcaccaacggtcac 177  Q
    |||||||||||||||||| || |||||  |||||||||||||||| || || |||| || | ||||||||||        |||||||||| |||||||||    
T  111 aatggacttaacccattttctattcaaaccaaaatgtttctacactcaaaaaggtagttaattaataacggt--------aaaatgtcactaacggtcac 202  T
Q  178 taaacggaaaaat---cttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    | ||||| |||||   || |||| |||||||||||||||||||||| ||| |||||||||||||  |||||||||||| |||||||||    
T  203 ttaacggtaaaattatctcaatt-ttactctagtaacttagtaaaataactattctcactaatcactaaaagtaattcccaccaaaat 289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 9497 - 9605
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||||||| |||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| ||||||||||| |  |||||||||||    
T  9497 aacggtaaaatgtcaccaacagtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactattctcactaaacactaaaagtaatt 9594  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  9595 cccaccaaaat 9605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 5342 - 5449
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  5342 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactattctcactaatcactaaaagtaatt 5439  T
Q  252 ctcaccaaaa 261  Q
    | ||| ||||    
T  5440 cccacaaaaa 5449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 15508 - 15590
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaa 236  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| |||||||||||    
T  15508 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactattctcactaa 15590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 602 - 494
Alignment:
Q  153 acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattc 252  Q
    |||||||||  | |||||| |||||||||||| |||| || ||| | ||| ||||||||||||||||| || | ||||||||||    ||||| ||||||    
T  602 acggtaaaacataaccaacagtcactaaacggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaaatattaaaaataattc 504  T
Q  253 tcaccaaaat 262  Q
    | ||||||||    
T  503 taaccaaaat 494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 26061 - 25952
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||| ||||| |||||||||||||||| ||  |||| ||||||||  |||||||| ||    
T  26061 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaatt-ttactatagtaacttagtaaaataaatattcacactaatcactaaaagtactt 25963  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  25962 cccaccaaaat 25952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 7811 - 7708
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||| ||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| ||||||||||| |  ||| |||||||    
T  7811 aacggtgaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactattctcactaaacactaagagtaatt 7714  T
Q  252 ctcacc 257  Q
    ||||||    
T  7713 ctcacc 7708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 193115 - 193008
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  193115 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactattctcactaatcactaaaagtaatt 193018  T
Q  252 ctcaccaaaa 261  Q
    | | ||||||    
T  193017 cccgccaaaa 193008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 155 - 262
Target Start/End: Original strand, 414 - 519
Alignment:
Q  155 ggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctc 254  Q
    ||||||||||||| |||||||| ||||| ||||||||| || | ||||| |||||||||||||||| ||| |||||||||||||  |||||||||||| |    
T  414 ggtaaaatgtcactaacggtcagtaaactgaaaaatctcaact-ttact-tagtaacttagtaaaataactattctcactaatcattaaaagtaattccc 511  T
Q  255 accaaaat 262  Q
    ||||||||    
T  512 accaaaat 519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 15635 - 15527
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| | ||| ||| | |||||||||||  |||||||||||    
T  15635 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaatgaaataactactctcactaatcactaaaagtaatt 15538  T
Q  252 ctcaccaaaat 262  Q
    | ||| |||||    
T  15537 cccactaaaat 15527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 262
Target Start/End: Original strand, 14136 - 14240
Alignment:
Q  156 gtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctca 255  Q
    |||||||||||| |||||||||||||||| ||||||| ||||  ||||||||||||||| | ||| ||| |||||||||||||  |||||||||| | ||    
T  14136 gtaaaatgtcactaacggtcactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaatcccca 14233  T
Q  256 ccaaaat 262  Q
    |||||||    
T  14234 ccaaaat 14240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 42988 - 43096
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| ||| |||||||||||| ||||||| ||||  ||||| ||||||||| | ||| ||| |||||||||||||  |||||||||||    
T  42988 aacggtaaaatgtcactaacagtcactaaacggtaaaatctcaatt--tactcaagtaacttaatgaaataactattctcactaatcactaaaagtaatt 43085  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  43086 cccaccaaaat 43096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 3227 - 3124
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||||  ||||||||||||||| | ||| ||| ||||||||||| |  |||||||||||    
T  3227 aacggtaaaatgtcactaacggtcattaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaaacactaaaagtaatt 3130  T
Q  252 ctcacc 257  Q
    ||||||    
T  3129 ctcacc 3124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 1734 - 1837
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||| ||||||||||| |||||||||||| ||| ||||||| ||||  ||||||||||||||| | ||| ||| ||||||||||| |  |||||||||||    
T  1734 aacgataaaatgtcactaacggtcactaatcggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaaacactaaaagtaatt 1831  T
Q  252 ctcacc 257  Q
    ||||||    
T  1832 ctcacc 1837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 8065 - 8165
Alignment:
Q  2 aatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttctttt 101  Q
    ||||||||| ||||||||||||||||||| ||| |||||||||||||||| ||||||| | || ||| |||  ||| |||||||||||||||||||| ||    
T  8065 aatgaaagtatgaggaaatttctcataagtgtaggtttttatatcaagtctccttaatggacccaaccctc-cacttaatggacttaacccatttctatt 8163  T
Q  102 ca 103  Q
    ||    
T  8164 ca 8165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 261
Target Start/End: Original strand, 8207 - 8277
Alignment:
Q  191 cttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||| |||||||||||||||||||||||||| || ||||||||| ||   ||||||||||||||||||||    
T  8207 cttaaatattactctagtaacttagtaaaacatcggttctcactactcaccaaaagtaattctcaccaaaa 8277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 17025 - 16917
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||  ||||||||||||||||  |||||| ||||  ||||||||||||||| | ||| ||| |||||||| ||||  |||||||||||    
T  17025 aacggtaaaatgtcattaacggtcactaaacggtgaaatctcaatt--tactctagtaacttaatgaaataactattctcaccaatcactaaaagtaatt 16928  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  16927 cccaccaaaat 16917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 247087 - 246980
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||  ||||||  ||||  ||||||||||||||||||||| ||| || ||||||||||  ||||| |||||    
T  247087 aacggtaaaatgtcactaacggtcactaaacgataaaatcccaatt--tactctagtaacttagtaaaataactatcctcactaatcactaaaa-taatt 246991  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  246990 cccaccaaaat 246980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 2409 - 2673
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  | |||||||||  | ||||||| ||| |||||||  || || ||  ||||||||||||||||         
T  2409 aaatgaaagtgtgaggaaatttcctctaagacaaggtttttataggatgtcccctaaatgggcctaatcctaaagcttcatggacttaacccattctaac 2508  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggttaaa---cggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    |||| || ||||||||||||||| || || || |  | |||||||||| | |||   |||||||||   | ||||||||||| ||||| ||||| |||||    
T  2509 tcaaatctaaaatgtttctacacacacaacggcaaatgactaataacgatcaaataacggtaaaattctagcaacggtcacttaacggtaaaatattaat 2608  T
Q  197 tattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |  || ||||||||||||||||||| ||| ||||||||||    ||||| |||||||||||||||    
T  2609 ttctaatctagtaacttagtaaaacgacggttctcactaaatactaaaaataattctcaccaaaa 2673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 5846 - 5955
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||||||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||| |  ||||| |||||    
T  5846 aacggtaaaatataaccaacggtcactaaacggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaaacattaaaaataatt 5944  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  5945 ctcaccaaaat 5955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 49150 - 49043
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| | |||  ||  ||||||||||||  |||||||||||    
T  49150 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtaacttaattaaattacttttctcactaatcactaaaagtaatt 49053  T
Q  252 ctcaccaaaa 261  Q
    | ||| ||||    
T  49052 cccactaaaa 49043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 12134 - 12031
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||| |||||||  |||||||||||||||| ||||||| ||||  ||||||||| ||||| | ||| ||| |||||||||||||  |||||||||||    
T  12134 aacggtataatgtcattaacggtcactaaacggtaaaatctcaatt--tactctagttacttaatgaaataactattctcactaatcactaaaagtaatt 12037  T
Q  252 ctcacc 257  Q
    ||||||    
T  12036 ctcacc 12031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 5493 - 5391
Alignment:
Q  153 acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattc 252  Q
    |||||||||| ||||||||||||||||||||| ||||||| |||  ||||||||||| |||| | ||| ||| ||||||||||| |  ||||| ||||||    
T  5493 acggtaaaatatcaccaacggtcactaaacggtaaaatctcaat--ttactctagtagcttaatgaaataactattctcactaaacactaaaattaattc 5396  T
Q  253 tcacc 257  Q
    |||||    
T  5395 tcacc 5391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 12762 - 13021
Alignment:
Q  1 aaatgaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttt 100  Q
    |||||||||||||||||||||||   |||||  | |||| ||||  | ||||| | ||| |||||||| || || || |||| | |||||||||| |       
T  12762 aaatgaaagtgtgaggaaatttcctctaagacaaggtttatataagatgtcccttaaatgggcctaaccctaaagcttaatgtatttaacccattccaac 12861  T
Q  101 tcaattc-aaaatgtttctacacccagaatggtatttcactaataacggttaaa---cggtaaaatgtcaccaacggtcactaaacggaaaaatcttaat 196  Q
    |||| || ||||||||||||||| || || || |  |||||||||||||| |||   ||||||||| |||||||||  ||||||| || |||||  ||||    
T  12862 tcaaatctaaaatgtttctacacacacaacggcaaatcactaataacggtcaaataacggtaaaatatcaccaacgaccactaaatggtaaaatactaat 12961  T
Q  197 tattactctagtaacttag-taaaacaacgattctcactaatcgataaaagtaattctca 255  Q
    || ||||||||||||||||  |||| |||| |||||||||| |  ||||| |||||||||    
T  12962 tactactctagtaacttagcaaaaataacggttctcactaaccactaaaaataattctca 13021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 25841 - 25943
Alignment:
Q  153 acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattc 252  Q
    ||||||||||||||| |||||||||||||||  |||| |  |||  |||||||||||||||| | ||| ||| |||||||||||||  ||||||||||||    
T  25841 acggtaaaatgtcactaacggtcactaaacgttaaaaccacaat--ttactctagtaacttaatgaaataactattctcactaatcactaaaagtaattc 25938  T
Q  253 tcacc 257  Q
    |||||    
T  25939 tcacc 25943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 34072 - 33968
Alignment:
Q  155 ggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctc 254  Q
    |||||||| | ||||||||||||||||||| |||| || ||||| ||| ||||||||||||||||| || | |||||||||| |  ||||| ||||||||    
T  34072 ggtaaaatataaccaacggtcactaaacggtaaaaact-aattactacactagtaacttagtaaaataatggttctcactaaacactaaaaataattctc 33974  T
Q  255 accaaa 260  Q
    ||||||    
T  33973 accaaa 33968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 252
Target Start/End: Original strand, 12733 - 12830
Alignment:
Q  153 acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattc 252  Q
    ||||||||||||||| |||||| ||||||||| ||||||| |||  |||||| ||||||||| | ||| ||| |||||||||||||  ||||||||||||    
T  12733 acggtaaaatgtcactaacggttactaaacggtaaaatctcaat--ttactccagtaacttaatgaaataactattctcactaatcactaaaagtaattc 12830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 255
Target Start/End: Original strand, 149246 - 149343
Alignment:
Q  156 gtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctca 255  Q
    |||||||||||| |||||||||||||||| ||||||| |||  ||||||||||| |||| | ||| ||| ||||||||||| |  |||||||||||||||    
T  149246 gtaaaatgtcactaacggtcactaaacggtaaaatctcaat--ttactctagtagcttactgaaataactattctcactaaacactaaaagtaattctca 149343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 262
Target Start/End: Original strand, 53973 - 54068
Alignment:
Q  168 caacggtcactaaacggaaaaatcttaattattactctagtaacttagt-aaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    ||||||||||| ||||| |||||  |||||| ||| ||||||||||||| |||| || | |||||||||| |  ||||| ||||||||||||||||    
T  53973 caacggtcacttaacggtaaaatactaattactacactagtaacttagtaaaaataatggttctcactaaacactaaaaataattctcaccaaaat 54068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 596 - 492
Alignment:
Q  155 ggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctc 254  Q
    |||||||| |||| |||||||||||||||| ||||||| ||||  ||||||||| | ||| | ||| ||| |||||||||||||  |||||||||||| |    
T  596 ggtaaaatatcactaacggtcactaaacggtaaaatctcaatt--tactctagttatttaatgaaataactattctcactaatcactaaaagtaattccc 499  T
Q  255 accaaaa 261  Q
    |||||||    
T  498 accaaaa 492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 254
Target Start/End: Original strand, 6634 - 6734
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| | | |||||||||||| ||||||| ||||  ||||||||||||||| | ||| ||| |||||||| ||||  |||||||||||    
T  6634 aacggtaaaatgtcactacctgtcactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcacgaatcactaaaagtaatt 6731  T
Q  252 ctc 254  Q
    |||    
T  6732 ctc 6734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 261
Target Start/End: Complemental strand, 5197 - 5093
Alignment:
Q  156 gtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctca 255  Q
    ||||||| | ||||||||| ||||||||| |||| || ||||| ||  ||||||||||||||||| || | |||||||||| |  ||||| |||||||||    
T  5197 gtaaaatataaccaacggttactaaacggtaaaaact-aattactatactagtaacttagtaaaataatggttctcactaaacattaaaaataattctca 5099  T
Q  256 ccaaaa 261  Q
    ||||||    
T  5098 ccaaaa 5093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 44; Significance: 4e-16; HSPs: 4)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 56217 - 56320
Alignment:
Q  155 ggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctc 254  Q
    ||||||||||||| ||||||||||||  || ||||||| ||||  ||||||||||||||| | ||| ||| |||||||||||||  |||||||||||| |    
T  56217 ggtaaaatgtcactaacggtcactaat-ggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaattccc 56313  T
Q  255 accaaaa 261  Q
    |||||||    
T  56314 accaaaa 56320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 260
Target Start/End: Complemental strand, 93448 - 93339
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcga-taaaagtaat 250  Q
    |||||||||||   ||||||||||||| ||||| |||||  |||||| ||||||||||||||||||||| || | ||||||||||   | ||||| ||||    
T  93448 aacggtaaaatactaccaacggtcacttaacggtaaaatactaattactactctagtaacttagtaaaataatggttctcactaaaaaactaaaaataat 93349  T
Q  251 tctcaccaaa 260  Q
    ||||||||||    
T  93348 tctcaccaaa 93339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 12993 - 12884
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||||||| |||| | ||||   ||| ||||||||||||||||| || | ||||||||||    ||||| |||||    
T  12993 aacggtaaaatataaccaacggtcactaaacggtaaaaac-taatcgctacactagtaacttagtaaaataagggttctcactaaatattaaaaataatt 12895  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  12894 ctcaccaaaat 12884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 107797 - 107689
Alignment:
Q  153 acggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattc 252  Q
    |||||||||  | |||||| |||||||||||| |||| || ||| | ||| ||||||||||||||||| || | ||||||||||    | ||| ||||||    
T  107797 acggtaaaacataaccaacagtcactaaacggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaaatatttaaaataattc 107699  T
Q  253 tcaccaaaat 262  Q
    ||||||||||    
T  107698 tcaccaaaat 107689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 8184 - 8075
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | |||||||||||||||| || |||| || ||||| ||| ||||||||||||||||| || | |||||||||| |  ||| | |||||    
T  8184 aacggtaaaatataaccaacggtcactaaatggtaaaaact-aattactacactagtaacttagtaaaataatggttctcactaaacactaacaataatt 8086  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  8085 ctcaccaaaat 8075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0537 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0537
Description:

Target: scaffold0537; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 589 - 651
Alignment:
Q  199 ttactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||||||||||||||| ||| |||||||||||||  |||||||||||| ||||||||    
T  589 ttactctagtaacttagtaaaataactattctcactaatcactaaaagtaattcccaccaaaa 651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 9656 - 9553
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||  ||| |||||||||||||||| ||||||| ||||  ||||| ||||||||| | ||| ||| ||||| |||||||  |||||||||||    
T  9656 aacggtaaaataccactaacggtcactaaacggtaaaatctcaatt--tactcaagtaacttaatgaaataactattctaactaatcattaaaagtaatt 9559  T
Q  252 ctcacc 257  Q
    ||||||    
T  9558 ctcacc 9553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0416 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 6269 - 6372
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| ||| |||||||||||| ||||||| |||  |||||||||||  ||| | ||| ||| ||||||||||| |  |||||||||||    
T  6269 aacggtaaaatgtcactaacagtcactaaacggtaaaatctcaat--ttactctagtatgttaatgaaataactattctcactaaacactaaaagtaatt 6366  T
Q  252 ctcacc 257  Q
    ||||||    
T  6367 ctcacc 6372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 6822 - 6713
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||||||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||| |  ||||| |||||    
T  6822 aacggtaaaatatgaccaacggtcactaaacggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaaacattaaaaataatt 6724  T
Q  252 ctcaccaaaat 262  Q
    | |||||||||    
T  6723 cgcaccaaaat 6713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 260
Target Start/End: Original strand, 8999 - 9071
Alignment:
Q  186 aaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaa 260  Q
    ||||||| |||| |||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||| |||||    
T  8999 aaaatctcaatt-ttactctagtaacttagtaaaataactattctcactaatc-ataaaagtaattctcgccaaa 9071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 8845 - 8960
Alignment:
Q  5 gaaagtgtgaggaaatttctcataagagtatgtttttatatcaagtccccttaataggcctaactctcaaactcaatggacttaacccatttcttttcaa 104  Q
    ||||||||| ||||||| |||||||||||| ||||| |||  ||||| ||||| | |||||||| ||| | || |||||||||||||||||||| |||||    
T  8845 gaaagtgtgtggaaatt-ctcataagagtaggtttt-atactaagtctccttattgggcctaaccctcca-cttaatggacttaacccatttctattcaa 8941  T
Q  105 ttc-aaaatgtttctacac 122  Q
      | |||||||||||||||    
T  8942 accaaaaatgtttctacac 8960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 11312 - 11421
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | |||||||||||||||| || |||| || ||||| ||| ||||||||||||||||| || | |||||||||| |  ||| | |||||    
T  11312 aacggtaaaatataaccaacggtcactaaatggtaaaaact-aattactacactagtaacttagtaaaataatggttctcactaaacactaacaataatt 11410  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  11411 ctcaccaaaat 11421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 43556 - 43665
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||||||| |||| || ||| | ||| ||||||||||||||||| ||   |||||||||| |  ||||| |||||    
T  43556 aacggtaaaatataaccaacggtcactaaacggtaaaaact-aatcactacactagtaacttagtaaaataatagttctcactaaacattaaaaataatt 43654  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  43655 ctcaccaaaat 43665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 33326 - 33252
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaa-cggaaaaatcttaattattactctagtaacttagtaaaacaacg 225  Q
    ||||||||||| |||||||||||||||||| ||| |||||  |||||| ||||||||||||||||||||| ||||    
T  33326 aacggtaaaatatcaccaacggtcactaaaacggtaaaatactaattactactctagtaacttagtaaaataacg 33252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0643 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 262
Target Start/End: Original strand, 152 - 245
Alignment:
Q  169 aacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    |||||||||| ||||| |||||  |||||| ||| ||||||||||||||||| |||| |||||||||| |  ||||| ||||||||| ||||||    
T  152 aacggtcacttaacggtaaaatactaattactaccctagtaacttagtaaaataacggttctcactaaacactaaaaataattctcatcaaaat 245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 6272 - 6387
Alignment:
Q  108 aaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactc 204  Q
    ||||||||||||||| |  |||||||  | |||||||||||| |   ||||||||||| ||| ||||||||||| || || |||||  |||||| |||||    
T  6272 aaaatgtttctacacactcaatggtaaattactaataacggtcacttaacggtaaaatatcaacaacggtcacttaaaggtaaaatactaattactactc 6371  T
Q  205 tagtaacttagtaaaa 220  Q
    ||||||||||||||||    
T  6372 tagtaacttagtaaaa 6387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 173 - 261
Target Start/End: Complemental strand, 50810 - 50724
Alignment:
Q  173 gtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    |||||||||||| ||||||| ||||  ||||||||||||||| | ||| ||| |||||||||||||  |||||||||||| ||||||||    
T  50810 gtcactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaattcccaccaaaa 50724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 2014 - 2071
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaa 210  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||| ||||||||||||    
T  2014 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaatt-ttactctagtaa 2071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 6159 - 6056
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||||||||||||||| || ||||| | ||||| ||||||  ||||  ||||||||||||| | | ||| ||| |||||||||||||  |||||||||||    
T  6159 aacggtaaaatgtcactaatggtcattgaacggtaaaatcccaatt--tactctagtaactcaatgaaataactattctcactaatcactaaaagtaatt 6062  T
Q  252 ctcacc 257  Q
    ||||||    
T  6061 ctcacc 6056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 220
Target Start/End: Complemental strand, 22077 - 21957
Alignment:
Q  103 aattcaaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattat 199  Q
    |||| ||||||||||||||| |  || ||||  | |||||||||||| |   ||||||||||| ||| ||| ||||||| ||||| |||||  ||||||     
T  22077 aatttaaaatgtttctacacactcaacggtaaattactaataacggtcacttaacggtaaaatatcaacaatggtcacttaacggtaaaatactaattac 21978  T
Q  200 tactctagtaacttagtaaaa 220  Q
    |||||||||||||||||||||    
T  21977 tactctagtaacttagtaaaa 21957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 49478 - 49369
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||||||| |||| || ||  | ||| ||||||||||||||||| || | || ||||||| |  ||||| |||||    
T  49478 aacggtaaaatataaccaacggtcactaaacggtaaaaact-aagcactacactagtaacttagtaaaataatggttttcactaaacattaaaaataatt 49380  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  49379 ctcaccaaaat 49369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 7824 - 7932
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||| | | ||||||||||||||||||| |||| | |||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  7824 aacggtaaattataaccaacggtcactaaacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 7921  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  7922 ctcaccaaaat 7932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 187 - 106
Alignment:
Q  155 ggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaa 236  Q
    ||||||||  |||||||||| ||||||||| |||||  |||| | ||||||||||||||||||||| |||| || |||||||    
T  187 ggtaaaataccaccaacggtaactaaacggtaaaatactaatcactactctagtaacttagtaaaataacggttttcactaa 106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 9700 - 9598
Alignment:
Q  158 aaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcacc 257  Q
    ||||| ||||||||| ||||||||||| ||| |  |||| | ||||||||||||||||||||| |||  || ||||||| |  ||||| ||||||| |||    
T  9700 aaaatatcaccaacgatcactaaacggtaaactactaatcactactctagtaacttagtaaaataacagttttcactaaccactaaaa-taattctaacc 9602  T
Q  258 aaaa 261  Q
    ||||    
T  9601 aaaa 9598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 8994 - 8888
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  8994 aacggtaaaatgtaaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 8898  T
Q  252 ctcaccaaaa 261  Q
    ||||||||||    
T  8897 ctcaccaaaa 8888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 15892 - 15786
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  15892 aacggtaaaatgtaaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 15796  T
Q  252 ctcaccaaaa 261  Q
    ||||||||||    
T  15795 ctcaccaaaa 15786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 260
Target Start/End: Original strand, 707 - 863
Alignment:
Q  108 aaaatgtttctacacccagaatggtatttcactaataacggtta---aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactc 204  Q
    ||||||||||||||| |  || ||||  | |||||||||||| |   ||||||||||| ||| ||| ||||||  ||||| ||||| ||||||| ||| |    
T  707 aaaatgtttctacacactcaacggtaaattactaataacggtcacttaacggtaaaatatcaacaagggtcacgtaacggtaaaatattaattactaccc 806  T
Q  205 tagtaacttagtaaaacaacgattctcact-aatcgataaaagtaattctcaccaaa 260  Q
    ||||||||||| |||| || | |||||||| || |  ||||| ||||||||||||||    
T  807 tagtaacttagcaaaataatggttctcactaaaacactaaaaataattctcaccaaa 863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 3577 - 3686
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | || |||||||||||||||| |||| | |||| | ||  ||||||||||||||||| || | ||||||||||    ||||| |||||    
T  3577 aacggtaaaatataactaacggtcactaaacggtaaaaac-taatcactatactagtaacttagtaaaataagggttctcactaaatattaaaaataatt 3675  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  3676 ctcaccaaaat 3686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 9711 - 9604
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||||| | ||||||||||||| ||| |||| || ||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  9711 aacggtaaaatgtaatcaacggtcactaa-cggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 9615  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  9614 ctcaccaaaat 9604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 5734 - 5653
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaa 236  Q
    |||||||||||||||| |||||| ||||||||| ||||||| |   ||||||||||||||| | | ||| ||| |||||||||||    
T  5734 aacggtaaaatgtcactaacggttactaaacggtaaaatctca---attactctagtaactcaatgaaataactattctcactaa 5653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 45648 - 45757
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||| ||||| | ||||||||||||||||||| || | || ||||| ||| ||||||||||||||||| || | ||| |||||| |  ||||| |||||    
T  45648 aacggcaaaatataaccaacggtcactaaacggtaacaact-aattactacactagtaacttagtaaaataatggttcccactaaacactaaaaataatt 45746  T
Q  252 ctcaccaaaat 262  Q
     ||||||||||    
T  45747 atcaccaaaat 45757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 107432 - 107329
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    |||| ||||| ||||| ||| || ||||||||| ||||||| ||||  ||||||||||||||| | ||| ||| ||||||||||| |  ||| |||||||    
T  107432 aacgataaaacgtcactaacagttactaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaaacactaagagtaatt 107335  T
Q  252 ctcacc 257  Q
    ||||||    
T  107334 ctcacc 107329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 262
Target Start/End: Original strand, 4037 - 4132
Alignment:
Q  166 accaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaat 262  Q
    ||||||||||||||||||| |||| || ||| | ||| ||||||||||||||||| || | ||||||||||    ||||| ||||||| ||||||||    
T  4037 accaacggtcactaaacggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaaatattaaaaataattctaaccaaaat 4132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 5835 - 5752
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaa 236  Q
    ||||||||||| | ||||| ||||||||||||| |||| | |||| | ||| ||||||||||||||||| || | ||||||||||    
T  5835 aacggtaaaatataaccaatggtcactaaacggtaaaaac-taatcactacactagtaacttagtaaaataagggttctcactaa 5752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 29806 - 29913
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | |||||||||||||||  | |||||   |||| | ||| ||||||||||||||||| || | |||||||||||  || ||| |||||    
T  29806 aacggtaaaatataaccaacggtcactaacagtaaaaac--taatcactacactagtaacttagtaaaataagggttctcactaat-tattaaaataatt 29902  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  29903 ctcaccaaaat 29913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 43605 - 43712
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | |||||||||||||||  | |||||   |||| | ||| ||||||||||||||||| || | |||||||||||| || ||| ||||     
T  43605 aacggtaaaatataaccaacggtcactaatggtaaaaac--taatcactacactagtaacttagtaaaataagggttctcactaatc-attaaaataatc 43701  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  43702 ctcaccaaaat 43712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 1153 - 1046
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||| ||| ||||| | ||| | ||| ||||||||||||||||| || | ||||||||||   || ||| |||||    
T  1153 aacggtaaaatctaaccaacggtcactaa-cggtaaaatat-aatcactacactagtaacttagtaaaataagggttctcactaa-atattaaaataatt 1057  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  1056 ctcaccaaaat 1046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 65 - 172
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||| ||||| |||| | |||| | ||| ||||||||||||||||| || | | ||||| |||  |||||| |||||    
T  65 aacggtaaaatataaccaacggtcact-aacggtaaaaac-taatcactacactagtaacttagtaaaataagggtcctcaccaattaataaaa-taatt 161  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  162 ctcaccaaaat 172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 232
Target Start/End: Complemental strand, 1921 - 1883
Alignment:
Q  194 aattattactctagtaacttagtaaaacaacgattctca 232  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  1921 aattactactctagtaacttagtaaaataacgattctca 1883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 7096 - 6989
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | |||||| |||||||| ||| |||| || ||| | ||| ||||||||||||||||| || | | |||||||||  |||||| |||||    
T  7096 aacggtaaaatataaccaacagtcactaa-cggtaaaaact-aatcactacactagtaacttagtaaaataagggtcctcactaattaataaaa-taatt 7000  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  6999 ctcaccaaaat 6989  T

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Target: scaffold0084 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 55733 - 55684
Alignment:
Q  180 aacggaaaaatcttaattattactctagtaacttagtaaaacaacgattct 230  Q
    ||||| ||||||| |||| |||||||||||||||||||||||||| |||||    
T  55733 aacggtaaaatctcaatt-ttactctagtaacttagtaaaacaactattct 55684  T

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Target: scaffold0080 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 262
Target Start/End: Complemental strand, 43426 - 43356
Alignment:
Q  193 taattattactctagtaacttagtaaaacaacgattctcactaatcga-taaaagtaattctcaccaaaat 262  Q
    |||||||||| ||||||||||||||||| || | |||||||||||| | ||||| ||||  ||||||||||    
T  43426 taattattacactagtaacttagtaaaataatggttctcactaatccactaaaaataatcgtcaccaaaat 43356  T

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Target: scaffold0075 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 34098 - 33989
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||||| | ||||||||||||||||||| |||| | |||| | ||| ||||||||||| ||||| || | |||| |||||    || || |||||    
T  34098 aacggtaaaatataaccaacggtcactaaacggtaaaaac-taatcactacactagtaacttattaaaataagggttcttactaaatattataaataatt 34000  T
Q  252 ctcaccaaaat 262  Q
    |||||||||||    
T  33999 ctcaccaaaat 33989  T

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Target: scaffold1272 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 261
Target Start/End: Original strand, 948 - 1041
Alignment:
Q  168 caacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaattctcaccaaaa 261  Q
    ||||||||||| ||||| |||||  |||||| ||| ||| |||||||| |||| |  | |||||||||| |  ||||| |||||||||||||||    
T  948 caacggtcacttaacggtaaaatactaattactacactaataacttagcaaaatagtggttctcactaaacactaaaaataattctcaccaaaa 1041  T

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Target: scaffold0574 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 9131 - 9051
Alignment:
Q  155 ggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaa 236  Q
    |||||||| | |||| |||||||||||||| |||| || ||| | ||| ||||||||||||||||| || | ||||||||||    
T  9131 ggtaaaatataaccagcggtcactaaacggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaa 9051  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 44176 - 44284
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||| | | ||||||||||||||||||| |||| | |||| | | | ||||||||||||||||| || | || |||||||    ||||| |||||    
T  44176 aacggtaaattataaccaacggtcactaaacggtaaaaac-taatcacttcactagtaacttagtaaaataagggttttcactaaatattaaaaataatt 44274  T
Q  252 ctcaccaaaa 261  Q
    ||||||||||    
T  44275 ctcaccaaaa 44284  T

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Target: scaffold0017; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 54479 - 54587
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaatcgataaaagtaatt 251  Q
    ||||||||| | | ||||||||||||||||||| |||| | |||| | | | ||||||||||||||||| || | || |||||||    ||||| |||||    
T  54479 aacggtaaattataaccaacggtcactaaacggtaaaaac-taatcacttcactagtaacttagtaaaataagggttttcactaaatattaaaaataatt 54577  T
Q  252 ctcaccaaaa 261  Q
    ||||||||||    
T  54578 ctcaccaaaa 54587  T

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Target: scaffold0507 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 1136 - 1068
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaa 220  Q
    ||||||||||| ||  ||||||||||  ||||| ||||| ||||||| ||| |||||||||||| ||||    
T  1136 aacggtaaaatatcgacaacggtcacgtaacggtaaaatattaattactaccctagtaacttagcaaaa 1068  T

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Target: scaffold0058 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 69916 - 69860
Alignment:
Q  169 aacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacg 225  Q
    |||||| ||| ||||| |||||  |||||| ||||||||||||||||||||| ||||    
T  69916 aacggttacttaacggtaaaatactaattactactctagtaacttagtaaaataacg 69860  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 108372 - 108439
Alignment:
Q  168 caacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaacaacgattctcactaa 236  Q
    ||||||||||||||||| |||| || ||| | ||| ||||||||||||||||| || | ||||||||||    
T  108372 caacggtcactaaacggtaaaaact-aatcactacactagtaacttagtaaaataagggttctcactaa 108439  T

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Target: scaffold0023 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 153646 - 153579
Alignment:
Q  152 aacggtaaaatgtcaccaacggtcactaaacggaaaaatcttaattattactctagtaacttagtaaaa 220  Q
    ||||||||||| | || |||||||||||||||| |||| | |||| | ||| |||||||||||||||||    
T  153646 aacggtaaaatataacgaacggtcactaaacggtaaaaac-taatcactacactagtaacttagtaaaa 153579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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