View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19475_high_68 (Length: 255)
Name: NF19475_high_68
Description: NF19475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19475_high_68 |
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Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 18 - 245
Target Start/End: Original strand, 44092722 - 44092952
Alignment:
| Q |
18 |
cattacaattatctgggattccaggtattccttaactatgaaatagtagttatatccaaaatcttaatctttcctccactcaatgggacattgaaaagaa |
117 |
Q |
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| T |
44092722 |
cattacaattatctgggattccagatattccttaactatgaaatagtagttatatccaaaatcttaatctttcctccactcaatgggacattgaaaagaa |
44092821 |
T |
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| Q |
118 |
tgccttggtgataaagttcttggcatttacatgcagtttccacctgtttgcat---taacctttcctgagttccagtggtgtgttgtattaagagccaaa |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44092822 |
tgccttggtgataaagttcttggcatttacatgcagtttccacctgtttgcattaataacctttcctgagttccagtggtgtgttgtattaagagccaaa |
44092921 |
T |
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| Q |
215 |
acatcaaacccatggaggaagtggatctgtg |
245 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
44092922 |
acatcaaacccatggaggaagtggatctgtg |
44092952 |
T |
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