View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19475_high_76 (Length: 247)
Name: NF19475_high_76
Description: NF19475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19475_high_76 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 11960897 - 11961133
Alignment:
| Q |
1 |
tgtgaaagtaaattagttaccacagattacattaaagaaacacaactaacagcttgattgtttcaaaaaagtgggaaaattttacttgtgaaaacagacc |
100 |
Q |
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| T |
11960897 |
tgtgaaagtaaattagttaccacagattacattaaagaaacacaactaacagcttgattgtttcaaacaagtgggaaaattttacttgtgaaaacagacc |
11960996 |
T |
|
| Q |
101 |
ctcaataagcactgatacacttaattcaaaagtttcagcatgatccttgtgttttatacgaaacttactctacaaaaccataaataaataaaagcagcac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11960997 |
ctcaataagcactgatacacttaattcaaaagtttcagcatgatccttgtgttttatacgaaacttactctacaaaaccataaataaataaaagcagcac |
11961096 |
T |
|
| Q |
201 |
ataatcaagggcaagagtcttcataccagttatagaa |
237 |
Q |
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||||||||||||||||||||||||||| ||||||||| |
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| T |
11961097 |
ataatcaagggcaagagtcttcatacctgttatagaa |
11961133 |
T |
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