View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19475_high_86 (Length: 231)
Name: NF19475_high_86
Description: NF19475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19475_high_86 |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 2 - 225
Target Start/End: Original strand, 45515704 - 45515927
Alignment:
| Q |
2 |
tatagttttccttggagtaggttgccaaatatccaattaaaattattgttttaggttaagtatcacatctaaggtagttgttgagcgtttgcacttgttt |
101 |
Q |
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| T |
45515704 |
tatagttttccttggagtaggttgccaaatatccaattaaaattattgttttaggttaagtatcacatctaaggtagttgttgagcgtttgcacttgttt |
45515803 |
T |
|
| Q |
102 |
tctacattttagggtgcggggtcagtaatctaattaacacatattcaccaaatgtcttttcttctatatatggacgaacctgccactccttttaagttgc |
201 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
45515804 |
tctacattttagggtgcggggtcagtaatctaattaacacatattcaccaaatgtcttttcttctatatgtggacgaacctgccactccttttaagttgc |
45515903 |
T |
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| Q |
202 |
tgcatacaggtataactcccctcc |
225 |
Q |
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|||||||||||||||||||||||| |
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| T |
45515904 |
tgcatacaggtataactcccctcc |
45515927 |
T |
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