View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19475_low_46 (Length: 354)

Name: NF19475_low_46
Description: NF19475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19475_low_46
NF19475_low_46
[»] chr3 (33 HSPs)
chr3 (24-215)||(6913249-6913437)
chr3 (255-315)||(6913471-6913531)
chr3 (1-86)||(29503372-29503457)
chr3 (1-96)||(4172466-4172562)
chr3 (1-96)||(50611496-50611592)
chr3 (1-96)||(25631605-25631702)
chr3 (1-96)||(38855115-38855212)
chr3 (1-96)||(2342391-2342487)
chr3 (1-96)||(39917476-39917571)
chr3 (1-96)||(46934542-46934637)
chr3 (1-86)||(4178474-4178560)
chr3 (1-86)||(25162346-25162431)
chr3 (1-86)||(36906031-36906117)
chr3 (1-83)||(38440657-38440739)
chr3 (1-96)||(44907477-44907574)
chr3 (1-91)||(32607372-32607464)
chr3 (26-91)||(35499306-35499371)
chr3 (36-96)||(14464407-14464467)
chr3 (26-96)||(3850560-3850630)
chr3 (1-86)||(17237712-17237800)
chr3 (5-96)||(49552307-49552398)
chr3 (26-96)||(12115993-12116063)
chr3 (46-96)||(36735277-36735327)
chr3 (15-96)||(46178476-46178558)
chr3 (1-60)||(30648798-30648858)
chr3 (24-86)||(37169140-37169203)
chr3 (306-339)||(6913533-6913566)
chr3 (27-68)||(20987942-20987983)
chr3 (36-80)||(31793997-31794039)
chr3 (27-80)||(42719436-42719489)
chr3 (27-80)||(52116154-52116207)
chr3 (46-86)||(22802931-22802971)
chr3 (40-68)||(47042208-47042236)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-84)||(201451-201534)
[»] chr1 (36 HSPs)
chr1 (1-86)||(14545436-14545521)
chr1 (1-96)||(51871770-51871865)
chr1 (1-91)||(3871320-3871410)
chr1 (1-86)||(28035055-28035141)
chr1 (1-86)||(30818425-30818510)
chr1 (1-96)||(5701163-5701261)
chr1 (1-81)||(34519054-34519134)
chr1 (1-96)||(51868724-51868820)
chr1 (1-86)||(20266218-20266304)
chr1 (1-96)||(9919295-9919391)
chr1 (1-86)||(11453850-11453937)
chr1 (1-86)||(7997703-7997791)
chr1 (1-86)||(25406363-25406449)
chr1 (4-86)||(38520616-38520698)
chr1 (3-96)||(50272221-50272315)
chr1 (1-86)||(27872655-27872740)
chr1 (1-88)||(45426145-45426229)
chr1 (26-86)||(25728064-25728124)
chr1 (26-86)||(35584726-35584786)
chr1 (1-67)||(19723268-19723335)
chr1 (36-86)||(18569425-18569475)
chr1 (37-91)||(19716013-19716067)
chr1 (1-86)||(5324637-5324722)
chr1 (1-96)||(9172394-9172492)
chr1 (1-96)||(9180376-9180474)
chr1 (36-96)||(30878981-30879041)
chr1 (1-68)||(33291497-33291565)
chr1 (1-86)||(40646604-40646691)
chr1 (15-86)||(7312192-7312263)
chr1 (1-83)||(50166178-50166261)
chr1 (26-96)||(50148278-50148348)
chr1 (15-96)||(15397309-15397390)
chr1 (26-86)||(40881118-40881178)
chr1 (1-60)||(31836748-31836809)
chr1 (1-68)||(7342656-7342724)
chr1 (46-86)||(39987306-39987346)
[»] chr5 (33 HSPs)
chr5 (256-324)||(40601214-40601282)
chr5 (1-96)||(28235490-28235585)
chr5 (3-86)||(781304-781387)
chr5 (1-96)||(18677544-18677641)
chr5 (1-79)||(30298130-30298208)
chr5 (1-86)||(21060361-21060446)
chr5 (1-74)||(27751853-27751926)
chr5 (9-86)||(35475424-35475501)
chr5 (1-96)||(2057917-2058013)
chr5 (1-91)||(7246868-7246959)
chr5 (1-96)||(36344570-36344664)
chr5 (1-96)||(27266938-27267035)
chr5 (1-96)||(30371629-30371726)
chr5 (1-86)||(19281024-19281109)
chr5 (1-86)||(43261898-43261982)
chr5 (1-96)||(7150414-7150510)
chr5 (2-86)||(16981205-16981289)
chr5 (5-91)||(7241692-7241779)
chr5 (15-86)||(27576443-27576514)
chr5 (26-96)||(10649358-10649428)
chr5 (26-86)||(26578164-26578224)
chr5 (1-96)||(7887017-7887112)
chr5 (1-82)||(19259890-19259974)
chr5 (26-82)||(20257799-20257855)
chr5 (1-88)||(43148643-43148731)
chr5 (24-79)||(34881631-34881686)
chr5 (15-96)||(15570814-15570896)
chr5 (39-79)||(3271526-3271566)
chr5 (46-86)||(11767722-11767762)
chr5 (15-86)||(6445851-6445922)
chr5 (2-80)||(19100721-19100800)
chr5 (36-68)||(1696981-1697013)
chr5 (40-84)||(14211118-14211162)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-96)||(8622-8717)
[»] chr4 (43 HSPs)
chr4 (1-96)||(31381751-31381846)
chr4 (1-86)||(8009440-8009524)
chr4 (1-86)||(51317910-51317995)
chr4 (1-96)||(34024516-34024611)
chr4 (1-86)||(37188673-37188757)
chr4 (1-96)||(50766588-50766684)
chr4 (1-86)||(38706789-38706875)
chr4 (1-91)||(4643777-4643868)
chr4 (1-86)||(10389833-10389918)
chr4 (5-86)||(21090077-21090158)
chr4 (1-86)||(32952827-32952911)
chr4 (1-96)||(1531820-1531918)
chr4 (1-86)||(43444317-43444403)
chr4 (1-86)||(56194523-56194611)
chr4 (1-97)||(9645628-9645725)
chr4 (1-86)||(10359626-10359711)
chr4 (1-86)||(2115666-2115753)
chr4 (36-96)||(47416798-47416858)
chr4 (1-86)||(53616729-53616816)
chr4 (1-68)||(868106-868172)
chr4 (1-91)||(35261110-35261201)
chr4 (1-96)||(9528956-9529053)
chr4 (1-79)||(25273811-25273893)
chr4 (1-79)||(29965565-29965645)
chr4 (1-96)||(9283825-9283921)
chr4 (1-84)||(14183729-14183813)
chr4 (36-91)||(27593953-27594008)
chr4 (15-86)||(35351254-35351325)
chr4 (26-96)||(20569166-20569236)
chr4 (26-96)||(43154126-43154195)
chr4 (26-91)||(49680456-49680521)
chr4 (1-86)||(6972733-6972820)
chr4 (1-96)||(12265369-12265465)
chr4 (26-78)||(46991235-46991287)
chr4 (1-60)||(1931795-1931854)
chr4 (24-87)||(49072860-49072923)
chr4 (26-68)||(2624440-2624482)
chr4 (46-91)||(5333656-5333701)
chr4 (26-86)||(35965079-35965140)
chr4 (40-84)||(1008221-1008265)
chr4 (46-86)||(5333584-5333624)
chr4 (15-59)||(21554902-21554946)
chr4 (40-68)||(36194637-36194665)
[»] chr2 (40 HSPs)
chr2 (1-96)||(32913148-32913243)
chr2 (1-86)||(40660011-40660094)
chr2 (7-96)||(27477061-27477150)
chr2 (1-96)||(3725087-3725182)
chr2 (1-96)||(4192745-4192840)
chr2 (1-96)||(21570486-21570583)
chr2 (1-86)||(34598904-34598989)
chr2 (1-88)||(3270308-3270395)
chr2 (1-86)||(8805783-8805868)
chr2 (1-86)||(26025489-26025574)
chr2 (1-96)||(6173538-6173634)
chr2 (3-96)||(8971708-8971803)
chr2 (1-96)||(45128110-45128206)
chr2 (1-96)||(40626107-40626202)
chr2 (1-79)||(22421659-22421737)
chr2 (1-96)||(30420583-30420680)
chr2 (1-96)||(36233911-36234010)
chr2 (10-86)||(31581808-31581884)
chr2 (1-86)||(32680660-32680747)
chr2 (1-96)||(41430934-41431030)
chr2 (1-96)||(2808551-2808645)
chr2 (1-83)||(7015790-7015872)
chr2 (26-96)||(27249256-27249326)
chr2 (7-86)||(39641943-39642024)
chr2 (1-88)||(41712844-41712932)
chr2 (1-67)||(9986421-9986491)
chr2 (26-86)||(27949339-27949399)
chr2 (1-91)||(20047161-20047252)
chr2 (26-96)||(42949620-42949691)
chr2 (1-86)||(32197874-32197959)
chr2 (15-60)||(36323801-36323846)
chr2 (256-297)||(39384685-39384726)
chr2 (1-86)||(4228048-4228135)
chr2 (37-96)||(459390-459449)
chr2 (1-61)||(3269190-3269252)
chr2 (1-61)||(3269749-3269811)
chr2 (26-68)||(1415479-1415521)
chr2 (26-80)||(18694970-18695024)
chr2 (1-54)||(25086986-25087039)
chr2 (36-68)||(37994188-37994220)
[»] chr8 (27 HSPs)
chr8 (1-86)||(19876131-19876216)
chr8 (1-86)||(35580377-35580462)
chr8 (1-96)||(11196801-11196894)
chr8 (1-96)||(44100013-44100107)
chr8 (1-96)||(9072626-9072723)
chr8 (1-86)||(2655788-2655875)
chr8 (1-96)||(11725591-11725686)
chr8 (1-91)||(4808878-4808969)
chr8 (26-96)||(9619463-9619533)
chr8 (1-96)||(42448106-42448203)
chr8 (1-91)||(33895995-33896087)
chr8 (1-96)||(17949156-17949252)
chr8 (1-89)||(43192425-43192513)
chr8 (3-96)||(43890205-43890300)
chr8 (1-77)||(11464098-11464176)
chr8 (36-86)||(14907039-14907089)
chr8 (1-86)||(44577955-44578041)
chr8 (26-79)||(32724594-32724647)
chr8 (37-96)||(9498718-9498777)
chr8 (1-86)||(34611723-34611809)
chr8 (24-68)||(15597269-15597313)
chr8 (37-68)||(39153261-39153292)
chr8 (24-85)||(17427321-17427382)
chr8 (46-86)||(18733940-18733980)
chr8 (15-67)||(33298794-33298846)
chr8 (1-68)||(37565958-37566026)
chr8 (36-64)||(44414194-44414222)
[»] chr7 (33 HSPs)
chr7 (1-86)||(1485336-1485421)
chr7 (1-96)||(433771-433867)
chr7 (1-96)||(23425451-23425546)
chr7 (1-91)||(26492272-26492363)
chr7 (1-96)||(48207804-48207899)
chr7 (1-86)||(1448909-1448994)
chr7 (1-86)||(45199111-45199196)
chr7 (1-86)||(35667311-35667396)
chr7 (1-86)||(42067140-42067225)
chr7 (1-96)||(22927949-22928045)
chr7 (3-96)||(46821916-46822011)
chr7 (1-91)||(2843308-2843397)
chr7 (1-86)||(35496254-35496340)
chr7 (9-86)||(20116495-20116572)
chr7 (1-96)||(42311182-42311278)
chr7 (1-91)||(23085428-23085519)
chr7 (26-93)||(46338958-46339025)
chr7 (1-59)||(17223078-17223136)
chr7 (1-86)||(21266304-21266388)
chr7 (3-79)||(7740559-7740635)
chr7 (1-96)||(26583616-26583712)
chr7 (36-83)||(3860867-3860914)
chr7 (1-91)||(31235871-31235962)
chr7 (1-96)||(42408264-42408360)
chr7 (27-86)||(32684597-32684656)
chr7 (1-60)||(17499738-17499797)
chr7 (1-60)||(17553417-17553476)
chr7 (37-68)||(32522042-32522073)
chr7 (15-86)||(36143778-36143849)
chr7 (1-86)||(14627958-14628044)
chr7 (1-67)||(23786508-23786573)
chr7 (26-86)||(1097708-1097768)
chr7 (40-80)||(5546277-5546317)
[»] chr6 (22 HSPs)
chr6 (1-96)||(17237364-17237459)
chr6 (6-86)||(33109746-33109826)
chr6 (1-86)||(8028197-8028283)
chr6 (1-86)||(23947397-23947482)
chr6 (1-86)||(7876123-7876210)
chr6 (1-86)||(7881181-7881268)
chr6 (1-96)||(12652842-12652942)
chr6 (1-96)||(33740657-33740753)
chr6 (1-91)||(4468466-4468556)
chr6 (1-86)||(8196486-8196572)
chr6 (1-86)||(25064147-25064234)
chr6 (1-68)||(12165771-12165838)
chr6 (26-96)||(8496867-8496937)
chr6 (1-86)||(16419070-16419156)
chr6 (26-80)||(13436705-13436759)
chr6 (36-86)||(17334687-17334737)
chr6 (1-82)||(35001506-35001588)
chr6 (1-65)||(4088393-4088458)
chr6 (37-87)||(33543734-33543785)
chr6 (1-96)||(10228581-10228677)
chr6 (48-96)||(28635249-28635297)
chr6 (8-96)||(34489150-34489241)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-86)||(16399-16487)
[»] scaffold0495 (1 HSPs)
scaffold0495 (1-96)||(5300-5396)
[»] scaffold0002 (1 HSPs)
scaffold0002 (40-80)||(453851-453891)


Alignment Details
Target: chr3 (Bit Score: 84; Significance: 7e-40; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 24 - 215
Target Start/End: Original strand, 6913249 - 6913437
Alignment:
Q  24 agaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgataataaacttatgacatggtatatgatg 123  Q
    |||||||| ||||||||||||||||||||| ||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||    
T  6913249 agaaaaaacctcgatctatgtgaaaatcacctatctagattgaaacatagagaaagagatgaaaaggggtgataataaactaatgacatggtatatgatg 6913348  T
Q  124 aaccgtgatannnnnnnnnnnnnnnnnnnnnaatatagaaaaaggtttttctaacataacatttcgaaaaatgctaggtttgatttttgttg 215  Q
    ||| ||||||                     ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  6913349 aacggtgata---tttttttccaatttttttaatatagaaaaaggtttttctaacataacatttagagaaatgctaggtttgatttttgttg 6913437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 6913471 - 6913531
Alignment:
Q  255 cgttgagaaacaacatagatgagtttggatctgaatcaagtcttcaatatgatggaatttc 315  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6913471 cgttgagaaacaacatagatgggtttggatctgaatcaagtcttcaatatgatggaatttc 6913531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 29503457 - 29503372
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| |||||||| || ||||||||||||||||| ||||||| ||||||| ||||||||||| |||||    
T  29503457 acacttagatgatgaaatcacaaagaaaaaacctagatctatgtgaaaatcaattatttagattgaaatatagagaaaaatatgaa 29503372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 4172562 - 4172466
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| |||||||| | | ||||||||||||||||||||||||| ||||||| | ||||||||||||||| | |||||||    
T  4172562 acacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatggatgat 4172466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 50611496 - 50611592
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| |||||||| | | ||||||| ||||||||||||||||| ||||||| ||||||||||||||||| |||| ||||    
T  50611496 acacttagatgatgaaatcacaaagaaaaaaacctagatctatatgaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgat 50611592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 25631605 - 25631702
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat--ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| ||||||||   || ||||||||||||||||||||||||| ||||||| | ||||||||||||| | |||||||||    
T  25631605 acacttagatgatgaaatcacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatggagagggatgat 25631702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 38855115 - 38855212
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaa--tctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| ||||||||  ||| ||||||||||||||||||||||||| ||||| | | ||||||||||||||| |||| ||||    
T  38855115 acacttagatgatgaaatcacaaagaaaaaaaatctagatctatgtgaaaatcacttatttagattgatatagagagaaaaagatgaagaggggtgat 38855212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 2342487 - 2342391
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaa-tctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| |||||||| | | ||| ||||||||||||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  2342487 acacttagatgatgaaatcacaaagaaaaaaatatagatatatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagagggttgat 2342391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 39917476 - 39917571
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| ||||||||  ||||||| || ||||||||||||||||||||||||| ||||||  | ||||||||| ||||| | |||||||    
T  39917476 acacttagatgatgaaatcacaaggaaaaaacctagatctatgtgaaaatcacttatttagattgaattagagagaaaaatatgaagatggatgat 39917571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 46934637 - 46934542
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| ||||||   |||||||| || ||||||||||||||||||||||||| ||||||| | ||||| ||||||||| |||| ||||    
T  46934637 acacttagatgatgaaatcaacaagaaaaaacctggatctatgtgaaaatcacttatttagattgaaatagagagagaaagatgaagaggggtgat 46934542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 4178560 - 4178474
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat-ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| ||||||||  || ||| ||| ||||||||||||||||| ||||||| | |||||||||||||||    
T  4178560 acacttagatgatgaaatcacaaagaaaaaaagctagatttatctgaaaatcacttatttagattgaaatagagagaaaaagatgaa 4178474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 25162431 - 25162346
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| |||||||| | | ||||||||||||| ||||||||||| ||||||| | |||||||||||||||    
T  25162431 acacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaa-tcacttatttagattgaaatagagagaaaaagatgaa 25162346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 36906117 - 36906031
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||| ||| |||||||| | |  |||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  36906117 acacttagatgatgaaattacaaagaaaaaaacctaaatctatgtgaaaatcacttatttatattgaaataaagagaaaaagatgaa 36906031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 38440657 - 38440739
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagat 83  Q
    |||||| ||| || |||||| | |||||||| || ||||||||||||||||||||||||| ||||||| | ||||||||||||    
T  38440657 acactttgatcatgaaatcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagat 38440739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 44907477 - 44907574
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat--ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||| ||| ||||||||   || |||||||||||||||||||| |||| ||||||| | ||||||||||||||| |||| ||||    
T  44907477 acacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttgtttagattgaaataaagagaaaaagatgaagaggggtgat 44907574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 32607464 - 32607372
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat--ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaaggg 91  Q
    ||||||||||||| |||| ||| ||||||||   || ||||||||||||||||||||||||| ||||||| | |||||||| |||||| ||||    
T  32607464 acacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaatgatgaagaggg 32607372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 35499306 - 35499371
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaaggg 91  Q
    |||||| || ||||||||||||||||||||||||| ||||||| | ||||||||||||||| ||||    
T  35499306 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggg 35499371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 14464467 - 14464407
Alignment:
Q  36 gatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  14464467 gatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaataggggtgat 14464407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 3850560 - 3850630
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    |||||| || ||||||||||||| ||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  3850560 aaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgat 3850630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 17237800 - 17237712
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat---ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| ||||||||    ||  |||||||||||||||||||||||| ||||||| | ||||||| |||||||    
T  17237800 acacttagatgatgaaatcacaaagaaaaaaaaacctaaatctatgtgaaaatcacttatttagattgaaatagagagaaacagatgaa 17237712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 49552307 - 49552398
Alignment:
Q  5 ttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||| |||||||| |||||||| || |||  |||||||| ||||||||||| ||||||| | ||| |||| |||||| |||| ||||    
T  49552307 ttagatgatgaaatcacaaagaaaaaacctagattaatgtgaaattcacttatttagattgaaatagagaaaaaatgatgaagaggggtgat 49552398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 12116063 - 12115993
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    |||||| || ||||| ||||||||||||||||||| ||||||| | |||| |||||||||| || ||||||    
T  12116063 aaaaaacctagatctttgtgaaaatcacttatttagattgaaataaagaggaaaagatgaagagagatgat 12115993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 36735277 - 36735327
Alignment:
Q  46 aaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||||||||||||| ||||||| ||| ||||| |||||||||    
T  36735277 aaaatcacttatttaaattgaaatatagagagaaaaatgaagagggatgat 36735327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 46178558 - 46178476
Alignment:
Q  15 aaatcacagagaaaaaatctcgatctatgtgaaaat-cacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    |||||||  |||||||| || ||||||||||||||  |||||||||| ||||||  | ||||||||||||||| |||||||||    
T  46178558 aaatcacgaagaaaaaacctagatctatgtgaaaaagcacttatttagattgaattagagagaaaaagatgaagagggatgat 46178476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 30648798 - 30648858
Alignment:
Q  1 acacttagatgataaaatcacagag-aaaaaatctcgatctatgtgaaaatcacttattta 60  Q
    ||||||||||||| |||||||| || |||||| || ||||||||||||| |||||||||||    
T  30648798 acacttagatgatgaaatcacaaagaaaaaaaactagatctatgtgaaagtcacttattta 30648858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 37169203 - 37169140
Alignment:
Q  24 agaaaaaatctcgatctatgtg-aaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||| |||||||||| ||||||||||||||| ||||||  | |||||||||| ||||    
T  37169203 agaaaaaatctagatctatgtgaaaaatcacttatttatattgaattagagagaaaaaggtgaa 37169140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Original strand, 6913533 - 6913566
Alignment:
Q  306 atggaatttccttgcttatataactgttaatatt 339  Q
    ||||||||||||| ||||||||||||||||||||    
T  6913533 atggaatttccttacttatataactgttaatatt 6913566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 20987942 - 20987983
Alignment:
Q  27 aaaaatctcgatctatgtgaaaatcacttatttaaattgaaa 68  Q
    ||||| |||||| ||| |||||||||||||||||||||||||    
T  20987942 aaaaaactcgatatatttgaaaatcacttatttaaattgaaa 20987983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 31794039 - 31793997
Alignment:
Q  36 gatctatgtgaaaatcacttatttaaattgaaacatagagaaaaa 80  Q
    ||||||||||||||||||||||||| ||||||  |||||||||||    
T  31794039 gatctatgtgaaaatcacttatttagattgaa--atagagaaaaa 31793997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 42719489 - 42719436
Alignment:
Q  27 aaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaa 80  Q
    ||||| || ||||||  ||||||||||||||||||||||||| | |||||||||    
T  42719489 aaaaacctagatctacatgaaaatcacttatttaaattgaaatagagagaaaaa 42719436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 52116154 - 52116207
Alignment:
Q  27 aaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaa 80  Q
    ||||| || ||| ||||||||||||||||||||||||| ||||| || ||||||    
T  52116154 aaaaaacttgatatatgtgaaaatcacttatttaaattaaaacaaagggaaaaa 52116207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 22802971 - 22802931
Alignment:
Q  46 aaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||||| ||||||| | |||||||||||||||    
T  22802971 aaaatcacttatttagattgaaatagagagaaaaagatgaa 22802931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 68
Target Start/End: Original strand, 47042208 - 47042236
Alignment:
Q  40 tatgtgaaaatcacttatttaaattgaaa 68  Q
    |||||||||||||||||||||||||||||    
T  47042208 tatgtgaaaatcacttatttaaattgaaa 47042236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 201451 - 201534
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatg 84  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  201451 acacttagatgatgaaatcacaaagaaaaaatctagatctatgtgaaaatcacttatttagattgaaatatagagaaaaagatg 201534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 14545521 - 14545436
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| |||||||| || ||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  14545521 acacttagatgatgaaatcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaa 14545436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 51871865 - 51871770
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| |||||||| || ||||||||||||| ||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  51871865 acacttagatgatgaaatcacaaagaaaaaagctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgat 51871770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 3871410 - 3871320
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaaggg 91  Q
    ||||||||||||| |||||||| ||||||||  | ||||||||||||||||||||||||| |||||||   ||||| ||||||||||||||    
T  3871410 acacttagatgatgaaatcacaaagaaaaaacttagatctatgtgaaaatcacttatttagattgaaattgagagagaaagatgaaaaggg 3871320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 28035141 - 28035055
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| |||||||| | | ||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  28035141 acacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaa 28035055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30818425 - 30818510
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| | |||||| || ||| ||||||||||||||||||||| ||||||| | |||||||||||||||    
T  30818425 acacttagatgatgaaatcacaaaaaaaaaaactagatttatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaa 30818510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 5701261 - 5701163
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat---ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||| ||| ||||||||    || ||||||||||||||||||||||||||||||||| | ||||||||||||||| |||| ||||    
T  5701261 acacttagatgatgaaattacaaagaaaaaaaaacctagatctatgtgaaaatcacttatttaaattgaaataaagagaaaaagatgaagaggggtgat 5701163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 34519134 - 34519054
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaag 81  Q
    ||||||||||||| |||||| | |||||||| || ||||||||||||||||||||||||| ||||||| | ||||||||||    
T  34519134 acacttagatgatgaaatcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaag 34519054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 51868724 - 51868820
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| |||||||| | | ||||||||||||| ||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  51868724 acacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgat 51868820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20266304 - 20266218
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat-ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||| ||| ||||||||  || ||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  20266304 acacttagatgatgaaattacaaagaaaaaaagctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaa 20266218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 9919391 - 9919295
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||| | |||||||| |||||||| | | ||||||||| ||||||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  9919391 acacttagatggtgaaatcacaaagaaaaaaacatagatctatgtaaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgat 9919295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 11453937 - 11453850
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaa--acatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| |||||||| || |||||||||||||| |||||||||| ||||||  | | |||||||||||||||    
T  11453937 acacttagatgatgaaatcacaaagaaaaaacctagatctatgtgaaaaccacttatttagattgaaatagagagagaaaaagatgaa 11453850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 7997791 - 7997703
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat---ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||| ||| ||||||||    || ||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  7997791 acacttagatgatgaaattacaaagaaaaaaaaacctagatctatgtgaaaatcacttatttatattgaaataaagagaaaaagatgaa 7997703  T

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Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 25406363 - 25406449
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||  |||||||| |||||||| | | ||||||||||||| ||||||||||| ||||||| | |||||||||||||||    
T  25406363 acacttagatgacgaaatcacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaa 25406449  T

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Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 38520616 - 38520698
Alignment:
Q  4 cttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    |||||||||| |||||||  ||||||||  | ||||||||||||||||||||||||| || |||| | |||||||||||||||    
T  38520616 cttagatgatgaaatcacgaagaaaaaacatagatctatgtgaaaatcacttatttagatcgaaatagagagaaaaagatgaa 38520698  T

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Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 50272221 - 50272315
Alignment:
Q  3 acttagatgataaaatcacagagaaaaaatctc-gatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||| ||| |||||||| |||||||| ||  ||||||||||||||| ||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  50272221 acttagaagatgaaatcacaaagaaaaaaacttagatctatgtgaaaattacttatttagattgaaataaagagaaaaagatgaataggggtgat 50272315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 27872740 - 27872655
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    |||||||||||||  ||||||  ||||||||  | ||||||||||||||||||||||||| ||||||| | || ||||||||||||    
T  27872740 acacttagatgatgcaatcacgaagaaaaaacttagatctatgtgaaaatcacttatttagattgaaatagagcgaaaaagatgaa 27872655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 45426145 - 45426229
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaa 88  Q
    ||||||||||||| ||||||||   ||||||  | ||||||||||||||||||||||||| ||| ||| | |||||||||||||||||    
T  45426145 acacttagatgatgaaatcaca---aaaaaacttagatctatgtgaaaatcacttatttagatttaaatagagagaaaaagatgaaaa 45426229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 25728064 - 25728124
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    |||||| || ||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  25728064 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaa 25728124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 35584726 - 35584786
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    |||||| || ||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  35584726 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaa 35584786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 19723335 - 19723268
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaa 67  Q
    ||||||||||||| |||||||| |||||||| | | ||||||||||||||||||||||||| ||||||    
T  19723335 acacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaa 19723268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 18569425 - 18569475
Alignment:
Q  36 gatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  18569425 gatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaa 18569475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 19716013 - 19716067
Alignment:
Q  37 atctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaaggg 91  Q
    |||||||||||||||||||||||| ||||||| | ||||||||||||||| ||||    
T  19716013 atctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggg 19716067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 5324637 - 5324722
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| || |||||  |  || || |||||||||||||||||| ||||||| | |||||||||||||||    
T  5324637 acacttagatgatgaaatcacaaaggaaaaacttaaatttacgtgaaaatcacttatttagattgaaatagagagaaaaagatgaa 5324722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 9172492 - 9172394
Alignment:
Q  1 acacttagatgataaaatcacagaga---aaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    |||||||||||||||||||||| | |   ||||| || ||||||||||||| ||||||||||| ||||||| | ||| ||||| ||||| |||| ||||    
T  9172492 acacttagatgataaaatcacacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagaaaaaaatatgaagaggggtgat 9172394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 9180474 - 9180376
Alignment:
Q  1 acacttagatgataaaatcacagaga---aaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    |||||||||||||||||||||| | |   ||||| || ||||||||||||| ||||||||||| ||||||| | ||| ||||| ||||| |||| ||||    
T  9180474 acacttagatgataaaatcacacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagaaaaaaatatgaagaggggtgat 9180376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 30879041 - 30878981
Alignment:
Q  36 gatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||||||||||||||| ||| ||| | ||||||||||||||| || ||||||    
T  30879041 gatctatgtgaaaatcacttatttagattaaaataaagagaaaaagatgaagagagatgat 30878981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 33291497 - 33291565
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaa 68  Q
    ||||||||||||| |||||||| |||||||| | | ||| ||||||||||||||||||||| |||||||    
T  33291497 acacttagatgatgaaatcacaaagaaaaaaacatagatttatgtgaaaatcacttatttatattgaaa 33291565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 40646691 - 40646604
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat--ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||| ||| ||||||||   || |||||| |||||||||||||||||| ||||||| | | |||||||||||||    
T  40646691 acacttagatgatgaaattacaaagaaaaaaaacctagatctacgtgaaaatcacttatttagattgaaataaatagaaaaagatgaa 40646604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 7312192 - 7312263
Alignment:
Q  15 aaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    |||||||  |||||||| || |||||| |||||||||| |||||||| |||||| | |||||||||||||||    
T  7312192 aaatcacgaagaaaaaacctagatctacgtgaaaatcatttatttaatttgaaatagagagaaaaagatgaa 7312263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 50166178 - 50166261
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagat 83  Q
    ||||||||||||| |||||||| |||||||| | |  |||||||||||| ||||||||||| ||||||| | | ||||||||||    
T  50166178 acacttagatgatgaaatcacatagaaaaaaacctaaatctatgtgaaattcacttatttagattgaaatagatagaaaaagat 50166261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 50148348 - 50148278
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    |||||| || ||||||||||||||||||||||||| ||| ||| | |||||||| |||||| | |||||||    
T  50148348 aaaaaacctagatctatgtgaaaatcacttatttagattaaaataaagagaaaaggatgaagatggatgat 50148278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 15397390 - 15397309
Alignment:
Q  15 aaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    |||||||||||| ||||||   || ||||||||||||||||||||| ||| ||| |||||||| || | ||||| |||||||    
T  15397390 aaatcacagagacaaaatccaaatttatgtgaaaatcacttatttatattaaaatatagagaacaaaacgaaaatggatgat 15397309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 40881118 - 40881178
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    |||||| || |||||| |||||||||||| ||||| ||||||| | |||||||||||||||    
T  40881118 aaaaaacctagatctaagtgaaaatcactcatttagattgaaatagagagaaaaagatgaa 40881178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 31836809 - 31836748
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat--ctcgatctatgtgaaaatcacttattta 60  Q
    ||||||||||||| |||| ||| ||||||||   || |||||||||||||||||||||||||    
T  31836809 acacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttattta 31836748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 7342724 - 7342656
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaa 68  Q
    ||||||||||||| |||||||| |||||||| | | |||||| || ||| ||||||||||| |||||||    
T  7342724 acacttagatgatgaaatcacaaagaaaaaaacatagatctacgtaaaagtcacttatttagattgaaa 7342656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 39987346 - 39987306
Alignment:
Q  46 aaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||||| |||||| || |||||||||||||||    
T  39987346 aaaatcacttatttagattgaatcagagagaaaaagatgaa 39987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 4e-26; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 40601282 - 40601214
Alignment:
Q  256 gttgagaaacaacatagatgagtttggatctgaatcaagtcttcaatatgatggaatttccttgcttat 324  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  40601282 gttgagaaacaacatagatgagtttggatctaaatcaagtcttcaataagatggaatttccttgcttat 40601214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 28235585 - 28235490
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||| || |||| | | ||||||||||||| |||| ||||    
T  28235585 acacttagatgatgaaatcacaaagaaaaaatctagatctatgtgaaaatcacttatttagatcgaaatagaaagaaaaagatgaagaggggtgat 28235490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 781387 - 781304
Alignment:
Q  3 acttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||| |||||||| |||||||  || ||||||| ||||||||||||||||| ||||||| |||||||||||||||||    
T  781387 acttagatgatgaaatcacaaagaaaaaccctagatctatctgaaaatcacttatttagattgaaatatagagaaaaagatgaa 781304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 18677544 - 18677641
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat--ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| ||||||||   || ||||||||||||||||||||||||| ||| ||| | ||||||||||||||| |||||||||    
T  18677544 acacttagatgatgaaatcacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattaaaatagagagaaaaagatgaagagggatgat 18677641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 30298208 - 30298130
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaa 79  Q
    ||||||||||||| |||||| | |||||||| || ||||||||||||||||||||||||| ||||||| ||||||||||    
T  30298208 acacttagatgatgaaatcataaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatatagagaaaa 30298130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 21060361 - 21060446
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| | |||||  |||||||| ||  |||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  21060361 acacttagatgatgacatcacgaagaaaaaacctacatctatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaa 21060446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27751926 - 27751853
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacataga 74  Q
    ||||||||||||| |||||||| |||||||| || ||||||||||||||||||||||||| ||||||| |||||    
T  27751926 acacttagatgatgaaatcacaaagaaaaaacctagatctatgtgaaaatcacttatttatattgaaatataga 27751853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 35475424 - 35475501
Alignment:
Q  9 atgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||||||||| ||||||| ||||| || ||||||||    
T  35475424 atgatgaaatcacaaagaaaaaatctagatctatgtgaaaatcacttatttagattgaaatatagataacaagatgaa 35475501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 2057917 - 2058013
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||| | |||||||| | | ||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  2057917 acacttagatgatgaaatcataaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgat 2058013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 7246959 - 7246868
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaaggg 91  Q
    ||||||||||||| |||||||| |||||||| | | ||||||||||||| ||||||||||| ||||||| | ||||||||||||||| ||||    
T  7246959 acacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggg 7246868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 36344570 - 36344664
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    |||||||||||||||| ||||| ||||||||  | |||| |||||||||| ||||||||| ||||||| ||||||||||||||||| |||| ||||    
T  36344570 acacttagatgataaa-tcacaaagaaaaaacttagatccatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagaggggtgat 36344664  T

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Target: chr5; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 27266938 - 27267035
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat--ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| ||||||||   || ||||||||||||||||||||||||| ||||||| | ||||||||| ||||| |||| ||||    
T  27266938 acacttagatgatgaaatcacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaatatgaagaggggtgat 27267035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 30371726 - 30371629
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat--ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||| ||| ||||||||   || ||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  30371726 acacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgat 30371629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 19281024 - 19281109
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| |||||||| || ||| | ||||||| ||||||||||| ||||||| | |||||||||||||||    
T  19281024 acacttagatgatgaaatcacaaagaaaaaacctagatatgtgtgaaagtcacttatttagattgaaatagagagaaaaagatgaa 19281109  T

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Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 43261898 - 43261982
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    |||||||||||||||||||||| || ||||  || ||||||||||||||||||||||||| ||||||| | ||| |||||||||||    
T  43261898 acacttagatgataaaatcacaaaggaaaac-ctagatctatgtgaaaatcacttatttagattgaaatagagataaaaagatgaa 43261982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 7150414 - 7150510
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctc-gatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| ||| |||| |||||||| ||  ||||||||||||| ||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  7150414 acacttagatgatgaaagcacaaagaaaaaaacttagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgat 7150510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 16981289 - 16981205
Alignment:
Q  2 cacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    |||||||||||| |||||||| |||||||| || ||| |||||| |||||||||||||| ||||||| | ||||||||| |||||    
T  16981289 cacttagatgatgaaatcacaaagaaaaaacctagatatatgtgtaaatcacttatttagattgaaatagagagaaaaatatgaa 16981205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 7241779 - 7241692
Alignment:
Q  5 ttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaaggg 91  Q
    ||||||||| |||||||| |||||||| | | ||||||||||||| ||||||||||| ||||||| | ||||||||||||||| ||||    
T  7241779 ttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggg 7241692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 27576443 - 27576514
Alignment:
Q  15 aaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    |||||||| ||||||||||| |||||||||||| |||||||||||| ||||||| | |||||||| ||||||    
T  27576443 aaatcacaaagaaaaaatctagatctatgtgaatatcacttatttacattgaaatagagagaaaaggatgaa 27576514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 10649428 - 10649358
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    |||||| || ||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  10649428 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgat 10649358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 26578224 - 26578164
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    |||||| || ||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  26578224 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaa 26578164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 7887017 - 7887112
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||| | ||||||||  | ||| ||||||||||||||||||||| ||| ||| | |||| |||||| ||| |||||||||    
T  7887017 acacttagatgatgaaatcaaaaagaaaaaacatagatttatgtgaaaatcacttatttagattaaaatagagaggaaaagacgaagagggatgat 7887112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 19259890 - 19259974
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc--tcgatctatgtgaaaa-tcacttatttaaattgaaacatagagaaaaaga 82  Q
    ||||||||||||| |||||||||||||||||    | |||||||||||||| ||||||||||| ||||||| | |||||||||||    
T  19259890 acacttagatgatgaaatcacagagaaaaaaaacttagatctatgtgaaaaatcacttatttagattgaaatagagagaaaaaga 19259974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 20257799 - 20257855
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaaga 82  Q
    |||||| || ||||||||||||||||||||||||| ||||||| | |||||||||||    
T  20257799 aaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaaga 20257855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 43148731 - 43148643
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaa-tctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaa 88  Q
    ||||||||||||| |||||||| |||||||| |||  || ||||||||| ||||||||||| || |||| | |||||||| ||||||||    
T  43148731 acacttagatgatgaaatcacaaagaaaaaaatctaaatatatgtgaaagtcacttatttagatcgaaatagagagaaaaggatgaaaa 43148643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 34881686 - 34881631
Alignment:
Q  24 agaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaa 79  Q
    |||||||| || ||||||||||||||||||||||||| ||||||| | ||||||||    
T  34881686 agaaaaaaactagatctatgtgaaaatcacttatttagattgaaatagagagaaaa 34881631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 15570896 - 15570814
Alignment:
Q  15 aaatcacagagaaaaaatctcgatctatgtgaaaa-tcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    |||||||| |||||||| ||  ||||||||||||| |||  |||||| ||||||  ||||||||||||||||| |||||||||    
T  15570896 aaatcacaaagaaaaaacctacatctatgtgaaaaatcaaatatttagattgaattatagagaaaaagatgaagagggatgat 15570814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 3271526 - 3271566
Alignment:
Q  39 ctatgtgaaaatcacttatttaaattgaaacatagagaaaa 79  Q
    |||||||||||||||||||||| ||||||||| ||||||||    
T  3271526 ctatgtgaaaatcacttatttagattgaaacagagagaaaa 3271566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 11767762 - 11767722
Alignment:
Q  46 aaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  11767762 aaaatcacttatttagattgaaatatagagaaaaagatgaa 11767722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 6445922 - 6445851
Alignment:
Q  15 aaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    |||||||  |||||||| || ||||||||| ||||||||||||||||||| | | | |||||||| ||||||    
T  6445922 aaatcacgaagaaaaaacctagatctatgtaaaaatcacttatttaaattaagatagagagaaaacgatgaa 6445851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 19100721 - 19100800
Alignment:
Q  2 cacttagatgataaaatcacagagaaaaaa-tctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaa 80  Q
    |||||||| || ||||||||| |||||||| |||  || ||||  ||||||||||||||||||||||| | |||||||||    
T  19100721 cacttagacgacaaaatcacaaagaaaaaaatctaaatttatgcaaaaatcacttatttaaattgaaatagagagaaaaa 19100800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 1696981 - 1697013
Alignment:
Q  36 gatctatgtgaaaatcacttatttaaattgaaa 68  Q
    ||||||||||||||||||||||||| |||||||    
T  1696981 gatctatgtgaaaatcacttatttagattgaaa 1697013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 14211162 - 14211118
Alignment:
Q  40 tatgtgaaaatcacttatttaaattgaaacatagagaaaaagatg 84  Q
    ||||||||||||||||||||| ||||||| | || ||||||||||    
T  14211162 tatgtgaaaatcacttatttagattgaaagaaagggaaaaagatg 14211118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 8717 - 8622
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| |||||||| || ||||||||||||||||||||||||| ||||||| | ||| |||||||||||||||| ||||    
T  8717 acacttagatgatgaaatcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagataaaaagatgaaaaggggtgat 8622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 31381751 - 31381846
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| ||||||||  | ||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| ||||    
T  31381751 acacttagatgatgaaatcacaaagaaaaaacttagatctatgtgaaaatcacttatttaaattgaaaaagagagaaaaagatgagaaggggtgat 31381846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8009440 - 8009524
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| |||||||| || ||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  8009440 acacttagatgatgaaatcacaaagaaaaaa-ctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaa 8009524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 51317995 - 51317910
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||| | |||||||| || ||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  51317995 acacttagatgatgaaatcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaa 51317910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 34024516 - 34024611
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||| | |||||||| || ||||||||||||||| ||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  34024516 acacttagatgatgaaatcaaaaagaaaaaacctagatctatgtgaaaataacttatttagattgaaatagagagaaaaagatgaagaggggtgat 34024611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 37188673 - 37188757
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||| ||||| |||||||| |||||||| || ||| ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  37188673 acacttaaatgatgaaatcacaaagaaaaaa-ctagatatatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaa 37188757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 50766588 - 50766684
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctc-gatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||| ||| |||||||| ||  ||||||||||||||||| ||||||| ||||||| | ||||||||||||||| |||||||||    
T  50766588 acacttagatgatgaaattacaaagaaaaaaacttagatctatgtgaaaatcatttatttagattgaaataaagagaaaaagatgaagagggatgat 50766684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 38706789 - 38706875
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| |||||||| | |  |||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  38706789 acacttagatgatgaaatcacaaagaaaaaaacctaaatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaa 38706875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4643868 - 4643777
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaa--tctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaaggg 91  Q
    ||||||||||||| |||||||| ||||||||  ||| ||||||||||||| ||||||||||| ||||||| | ||||||||||||||| ||||    
T  4643868 acacttagatgatgaaatcacaaagaaaaaaaatctagatctatgtgaaa-tcacttatttagattgaaatagagagaaaaagatgaagaggg 4643777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 10389833 - 10389918
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||| |  ||||||| || ||||||||||||| ||||||||||| ||||||| | |||||||||||||||    
T  10389833 acacttagatgatgaaatcaaaaggaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaa 10389918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 21090158 - 21090077
Alignment:
Q  5 ttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||| |||||||  |||||||| ||  |||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  21090158 ttagatgatgaaatcacgaagaaaaaacctaaatctatgtgaaaatcacttatttatattgaaatagagagaaaaagatgaa 21090077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 32952827 - 32952911
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||  |||||||| |||||||| || |||||||||||||| ||||||||||| |||||| | |||||||||||||||    
T  32952827 acacttagatgacgaaatcacaaagaaaaaa-ctagatctatgtgaaaaacacttatttaatttgaaatagagagaaaaagatgaa 32952911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 1531918 - 1531820
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaa--tctcgatctatgtgaaaatcacttatttaaattgaaacatagaga-aaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| ||||||||  ||| ||||||||||||||||||||||||| ||||||| | ||||| ||||||| || |||| ||||    
T  1531918 acacttagatgatgaaatcacaaagaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaatagagagagaaaagataaagaggggtgat 1531820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 43444403 - 43444317
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||| ||| |||||||| | | ||| ||||||||||||||||||||| ||||||| | |||||||||||||||    
T  43444403 acacttagatgatgaaattacaaagaaaaaaacctagatatatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaa 43444317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 56194611 - 56194523
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat---ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| ||||||||    || ||||||||||||| ||||||||||| ||||||| | |||||||||||||||    
T  56194611 acacttagatgatgaaatcacaaagaaaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaa 56194523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 9645628 - 9645725
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgata 97  Q
    ||||||||||||| ||||| || |||||||| | | ||||||||||||| ||||||||||| ||||||| | ||| ||||||||||| |||| |||||    
T  9645628 acacttagatgatgaaatcgcaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagacaaaaagatgaagaggggtgata 9645725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 10359626 - 10359711
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||  |||||||| || ||| ||||| ||||||||||||||| || |||| | |||||||||||||||    
T  10359626 acacttagatgatgaaatcacgaagaaaaaacctagatatatgttaaaatcacttatttagatcgaaatagagagaaaaagatgaa 10359711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2115666 - 2115753
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat--ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||| ||| ||||||||   ||  |||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  2115666 acacttagatgatgaaattacaaagaaaaaaaacctaaatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaa 2115753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 47416858 - 47416798
Alignment:
Q  36 gatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  47416858 gatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgat 47416798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 53616729 - 53616816
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat--ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||| ||| ||||||||   || ||||||||||||||||||||||||| ||||||| | |||||||| ||||||    
T  53616729 acacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaacgatgaa 53616816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 868172 - 868106
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaa 68  Q
    ||||||||||||| |||||||| ||||||| ||| ||||||||||||||| ||||||||| |||||||    
T  868172 acacttagatgatgaaatcacaaagaaaaa-tctagatctatgtgaaaataacttatttagattgaaa 868106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 35261201 - 35261110
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacataga-gaaaaagatgaaaaggg 91  Q
    ||||||||||||| |||||||  |||||||| ||  |||||||||||||||||||||||| |||| || | ||| |||||||||||| ||||    
T  35261201 acacttagatgatcaaatcacgaagaaaaaacctaaatctatgtgaaaatcacttatttagattgcaataaagaggaaaaagatgaagaggg 35261110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9528956 - 9529053
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc--tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| ||||||||    |  |||||||||||||||||||||||| ||||||| | |||||||||||| || |||| ||||    
T  9528956 acacttagatgatgaaatcacaaagaaaaaaaacataaatctatgtgaaaatcacttatttagattgaaataaagagaaaaagataaagaggggtgat 9529053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 25273893 - 25273811
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat----ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaa 79  Q
    ||||||||||||| |||||||| ||||||||     || ||||||||||||||||||||||||| ||||||| | ||||||||    
T  25273893 acacttagatgatgaaatcacaaagaaaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaa 25273811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 29965645 - 29965565
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat--ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaa 79  Q
    ||||||||||||| |||| ||| ||||||||   || ||||||||||||||||||||||||| ||||||| | ||||||||    
T  29965645 acacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaa 29965565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 9283921 - 9283825
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||| ||| | |||||| | | ||||||||| ||||||||||||||| ||||||| | |||||||| |||||| |||| ||||    
T  9283921 acacttagatgatgaaattacaaataaaaaaacctagatctatgtaaaaatcacttatttagattgaaataaagagaaaacgatgaagaggggtgat 9283825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14183813 - 14183729
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctc-gatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatg 84  Q
    ||||||||||| | |||||||| |||||||| ||  ||||  ||||||||||||||||||| ||||||| | |||||||||||||    
T  14183813 acacttagatggtgaaatcacaaagaaaaaaacttagatccttgtgaaaatcacttatttagattgaaatagagagaaaaagatg 14183729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 27593953 - 27594008
Alignment:
Q  36 gatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaaggg 91  Q
    ||||||||||||| || |||||||| ||||||| ||||||||||||||||| ||||    
T  27593953 gatctatgtgaaactcgcttatttagattgaaatatagagaaaaagatgaagaggg 27594008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 35351254 - 35351325
Alignment:
Q  15 aaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    |||||||  |||||||| || |||||||||||| |||||||||||||||||||| | || ||||| ||||||    
T  35351254 aaatcacgtagaaaaaacctagatctatgtgaatatcacttatttaaattgaaataaagcgaaaaggatgaa 35351325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 20569236 - 20569166
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    |||||| || ||||||||||||||||| ||||||| ||||||| | ||||||||| ||||| |||| ||||    
T  20569236 aaaaaacctagatctatgtgaaaatcatttatttagattgaaataaagagaaaaaaatgaagaggggtgat 20569166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 43154126 - 43154195
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    |||||| || ||||||||||||||||||||||||| ||||||| | |||| |||||||||| |||| ||||    
T  43154126 aaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagag-aaaagatgaagaggggtgat 43154195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 49680521 - 49680456
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaaggg 91  Q
    |||||| || |||| |||||||||||||||||||  ||||||| | ||||||||||||||| ||||    
T  49680521 aaaaaacctagatccatgtgaaaatcacttatttggattgaaataaagagaaaaagatgaagaggg 49680456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 6972820 - 6972733
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc--tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| ||||||||    | ||||||||| ||| ||||||||||| ||||||| | ||| |||||||||||    
T  6972820 acacttagatgatgaaatcacaaagaaaaaaaacatggatctatgtaaaagtcacttatttagattgaaatacagataaaaagatgaa 6972733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 12265465 - 12265369
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaa-tcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||| |||||| ||||||||  ||| |||| || |||||||||||||| ||||||||||| ||||||| |  || ||||||||||| |||| ||||    
T  12265465 acactcagatgacaaaatcacgtagagaaaacctagatctatgtgaaaaatcacttatttagattgaaatagggataaaaagatgaagaggggtgat 12265369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 46991235 - 46991287
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaa 78  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||| | |||||||    
T  46991235 aaaaaatctagatctatgtgaaaatcactcatttagattgaaatagagagaaa 46991287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 1931795 - 1931854
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttattta 60  Q
    ||||||||||||| ||||||||  ||||||| || ||||| ||||||||| |||||||||    
T  1931795 acacttagatgatgaaatcacaatgaaaaaacctagatctttgtgaaaataacttattta 1931854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 49072860 - 49072923
Alignment:
Q  24 agaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaa 87  Q
    ||||||||| |  ||||||||||||||||||||| || ||||||| | ||||||||| ||||||    
T  49072860 agaaaaaatataaatctatgtgaaaatcacttatatagattgaaataaagagaaaaatatgaaa 49072923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 2624482 - 2624440
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaa 68  Q
    |||||| || ||||||||||||||||||||||||| |||||||    
T  2624482 aaaaaacctagatctatgtgaaaatcacttatttagattgaaa 2624440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 5333656 - 5333701
Alignment:
Q  46 aaaatcacttatttaaattgaaacatagagaaaaagatgaaaaggg 91  Q
    ||||||||||||||| ||||||| | ||||||||||||||| ||||    
T  5333656 aaaatcacttatttatattgaaatagagagaaaaagatgaagaggg 5333701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 35965079 - 35965140
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaa-tcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    |||||| || |||||||||||||| ||||||||| | ||||||| | |||||||||||||||    
T  35965079 aaaaaacctagatctatgtgaaaaatcacttattcagattgaaatagagagaaaaagatgaa 35965140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 1008265 - 1008221
Alignment:
Q  40 tatgtgaaaatcacttatttaaattgaaacatagagaaaaagatg 84  Q
    ||||||||||||||||||||| ||| ||| | |||||||||||||    
T  1008265 tatgtgaaaatcacttatttagattaaaatagagagaaaaagatg 1008221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 5333584 - 5333624
Alignment:
Q  46 aaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||||| ||||||| | |||||||||||||||    
T  5333584 aaaatcacttatttatattgaaatagagagaaaaagatgaa 5333624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 21554902 - 21554946
Alignment:
Q  15 aaatcacagagaaaaaatctcgatctatgtgaaaatcacttattt 59  Q
    |||||||| |||||| |||| ||| ||||||||||||||||||||    
T  21554902 aaatcacaaagaaaatatctagatttatgtgaaaatcacttattt 21554946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 68
Target Start/End: Complemental strand, 36194665 - 36194637
Alignment:
Q  40 tatgtgaaaatcacttatttaaattgaaa 68  Q
    |||||||||||||||||||||||||||||    
T  36194665 tatgtgaaaatcacttatttaaattgaaa 36194637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 32913243 - 32913148
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| |||||||| || ||||||||||||||||||||||||||||||||| |||||||||| ||| || |||| ||||    
T  32913243 acacttagatgatgaaatcacaaagaaaaaacctagatctatgtgaaaatcacttatttaaattgaaatatagagaaaaggatcaagaggggtgat 32913148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 40660011 - 40660094
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  40660011 acacttagatgatgaaatcacaaagaaaaaatctagatctatgtgaaaatcacttatttagattgaa--atagagaaaaagatgaa 40660094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 27477150 - 27477061
Alignment:
Q  7 agatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||| ||||||||| ||||||| ||||||||||||||||| |||| ||||    
T  27477150 agatgatgaaatcacaaagaaaaaatctagatctatgtgaaaattacttatttagattgaaatatagagaaaaagatgaagaggggtgat 27477061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 3725182 - 3725087
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||| ||| |||||||| ||||||||||  ||||||||||||||||||||||||| ||||||| | ||||||||||||||| ||| |||||    
T  3725182 acacttagacgatgaaatcacaaagaaaaaatcaagatctatgtgaaaatcacttatttatattgaaatagagagaaaaagatgaagaggaatgat 3725087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 4192840 - 4192745
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| |||||||| ||  || ||||||||||||||||||||| ||||||| ||||||||||||||||| |||| ||||    
T  4192840 acacttagatgatgaaatcacaaagaaaaaacctaaatatatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgat 4192745  T

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Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 21570486 - 21570583
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaa--tctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| | ||||||  ||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||| ||||    
T  21570486 acacttagatgatgaaatcacaaaaaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgat 21570583  T

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Target: chr2; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 34598989 - 34598904
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| | |||||| || ||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  34598989 acacttagatgatgaaatcacaaaaaaaaaaactagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaa 34598904  T

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Target: chr2; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3270308 - 3270395
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaa 88  Q
    ||||||||||||| |||||||| | |||||| || ||||||||||||||||||||||||| ||||||| | | |||||||||||||||    
T  3270308 acacttagatgatgaaatcacaaaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaaaagaaaaagatgaaaa 3270395  T

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Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 8805868 - 8805783
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||| ||||||| |||||||| |||||||| || |||| |||||||||||||||||||||||||||| | ||||||||| |||||    
T  8805868 acactcagatgatgaaatcacaaagaaaaaacctagatccatgtgaaaatcacttatttaaattgaaataaagagaaaaatatgaa 8805783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 26025489 - 26025574
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||| ||||| |||||||| |||||||| || |||||||||||||| |||||||||| ||||||| | |||||||||||||||    
T  26025489 acacttacatgatgaaatcacaaagaaaaaacctagatctatgtgaaaaccacttatttagattgaaatagagagaaaaagatgaa 26025574  T

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Target: chr2; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 6173634 - 6173538
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    |||||| |||||| |||||||| |||||||| | | ||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  6173634 acacttcgatgatgaaatcacaaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgat 6173538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 8971708 - 8971803
Alignment:
Q  3 acttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaa--acatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||| |||||||| |||||||| || ||||||||||||||||||||||||| ||| ||  | | ||||||||||||||| |||||||||    
T  8971708 acttagatgatgaaatcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattaaaataaagagagaaaaagatgaagagggatgat 8971803  T

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Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 45128206 - 45128110
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| |||||||| | | ||||||||||||| ||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  45128206 acacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaataaagagaaaaagatgaagaggggtgat 45128110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 40626107 - 40626202
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| ||||||||  | |||||||||||||||| |||||||| ||||||| | ||||||||||| ||| |||| ||||    
T  40626107 acacttagatgatgaaatcacaaagaaaaaacgtagatctatgtgaaaatcccttatttagattgaaatagagagaaaaagacgaagaggggtgat 40626202  T

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Target: chr2; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 22421737 - 22421659
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaa 79  Q
    ||||||||||||| |||||||| |||||||| || ||||||||||||| ||||||||||| ||||||| | ||||||||    
T  22421737 acacttagatgatgaaatcacaaagaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaa 22421659  T

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Target: chr2; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 30420680 - 30420583
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat--ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||| ||| ||||||||   || ||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  30420680 acacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgat 30420583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 36234010 - 36233911
Alignment:
Q  1 acacttagatgataaaatcacagag----aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||| ||| ||    ||||||||| ||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  36234010 acacttagatgatgaaattacaaagaaaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgat 36233911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 31581808 - 31581884
Alignment:
Q  10 tgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    |||| |||||| | |||||||| || ||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  31581808 tgatgaaatcaaaaagaaaaaaactagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaa 31581884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 32680660 - 32680747
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat--ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| ||||||||   || ||||||||||||| ||||||||||| ||||||| | |||||||||||||||    
T  32680660 acacttagatgatgaaatcacaaagaaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaa 32680747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 41431030 - 41430934
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaa-atctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| ||||||| | || ||||||||| ||| | ||||||||| ||||||| ||||||||||||||||| |||| ||||    
T  41431030 acacttagatgatgaaatcacaaagaaaaacacctagatctatgtaaaagtgacttatttagattgaaatatagagaaaaagatgaagaggggtgat 41430934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 2808551 - 2808645
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| |||||||  || ||||||||||||||||||||||||| | ||||| | ||||||| ||||||| |||| ||||    
T  2808551 acacttagatgatgaaatcacaaagaaaaac-ctagatctatgtgaaaatcacttatttagactgaaatagagagaaatagatgaagaggggtgat 2808645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7015790 - 7015872
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagat 83  Q
    ||||||||||||| ||||||||  ||||||| ||  |||||||||||||||| ||||||| ||||||| | ||||||||||||    
T  7015790 acacttagatgatgaaatcacaaggaaaaaacctaaatctatgtgaaaatcaattatttagattgaaataaagagaaaaagat 7015872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 27249256 - 27249326
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    |||||| || ||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  27249256 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgat 27249326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 39641943 - 39642024
Alignment:
Q  7 agatgataaaatcac--agagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||| |||||||  ||| |||||| || ||||||||||||||||| ||||||||||||||| | |||||||||||||||    
T  39641943 agatgatgaaatcacgaagaaaaaaaacctagatctatgtgaaaatcatttatttaaattgaaatagagagaaaaagatgaa 39642024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41712844 - 41712932
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaa 88  Q
    ||||||||||||  ||||||||||||||||| | |  |||||||||||||||||||||||| ||| ||| | |||||||| ||||||||    
T  41712844 acacttagatgaggaaatcacagagaaaaaaacctaaatctatgtgaaaatcacttatttagattaaaatagagagaaaatgatgaaaa 41712932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9986421 - 9986491
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat----ctcgatctatgtgaaaatcacttatttaaattgaa 67  Q
    ||||||||||||| |||||||| |||||||||    || ||||||||||||||||||||||||| ||||||    
T  9986421 acacttagatgatgaaatcacaaagaaaaaataaacctagatctatgtgaaaatcacttatttagattgaa 9986491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 27949399 - 27949339
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    |||||| || ||||||||||||||||||||||||| ||||||||| || ||||| ||||||    
T  27949399 aaaaaacctagatctatgtgaaaatcacttatttagattgaaacagagcgaaaaggatgaa 27949339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 20047161 - 20047252
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaaggg 91  Q
    ||||||||||||| ||||||||  ||||||| | |  |||||||| ||| ||||||||||| ||||||| | ||||||||||||||| ||||    
T  20047161 acacttagatgatgaaatcacaatgaaaaaaacctaaatctatgtaaaagtcacttatttagattgaaaaagagagaaaaagatgaataggg 20047252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 42949691 - 42949620
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagag-aaaaagatgaaaagggatgat 96  Q
    |||||| || ||||||||||||||||||||||||| ||||||| | |||| ||||||||||| |||| ||||    
T  42949691 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaaagatgaagaggggtgat 42949620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 32197874 - 32197959
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||  |||||||| |||||||| ||  || ||||  ||||||| ||||||| ||||||| | |||||||||||||||    
T  32197874 acacttagatgacgaaatcacaaagaaaaaacctaaatttatgcaaaaatcatttatttatattgaaataaagagaaaaagatgaa 32197959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 36323846 - 36323801
Alignment:
Q  15 aaatcacagagaaaaaatctcgatctatgtgaaaatcacttattta 60  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||    
T  36323846 aaatcacagagaaaaaacctaaatctatgtgaaaatcacttattta 36323801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 297
Target Start/End: Complemental strand, 39384726 - 39384685
Alignment:
Q  256 gttgagaaacaacatagatgagtttggatctgaatcaagtct 297  Q
    ||||||||||||||| ||||||||| ||||||||||||||||    
T  39384726 gttgagaaacaacatggatgagtttagatctgaatcaagtct 39384685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 4228135 - 4228048
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc--tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| ||||||||    | |||||||||| |||||||||||||| ||||||| | ||| ||||| |||||    
T  4228135 acacttagatgatgaaatcacaaagaaaaaaaacatagatctatgtgtaaatcacttatttatattgaaataaagataaaaatatgaa 4228048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 459390 - 459449
Alignment:
Q  37 atctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||||| |||||||||| ||||| | |||||||| |||||| |||| ||||    
T  459390 atctatgtgaaaatcgcttatttaaaatgaaatagagagaaaaggatgaagaggggtgat 459449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3269190 - 3269252
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat--ctcgatctatgtgaaaatcacttatttaa 61  Q
    ||||||||||||| |||||||| | ||||||   || ||||||||||||||||||||||||||    
T  3269190 acacttagatgatgaaatcacaaaaaaaaaaaacctagatctatgtgaaaatcacttatttaa 3269252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3269749 - 3269811
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat--ctcgatctatgtgaaaatcacttatttaa 61  Q
    ||||||||||||| |||||||| | ||||||   || ||||||||||||||||||||||||||    
T  3269749 acacttagatgatgaaatcacaaaaaaaaaaaacctagatctatgtgaaaatcacttatttaa 3269811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 1415521 - 1415479
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaa 68  Q
    ||||||||| ||| | |||||||||||||||||||||||||||    
T  1415521 aaaaaatcttgatatgtgtgaaaatcacttatttaaattgaaa 1415479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 18695024 - 18694970
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaa 80  Q
    ||||||||  ||||||||| ||||||||||||||| ||||||| | |||||||||    
T  18695024 aaaaaatcgtgatctatgtaaaaatcacttatttagattgaaatagagagaaaaa 18694970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25087039 - 25086986
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcact 54  Q
    ||||||||||||| |||||| | | |||||| || |||||||||||||||||||    
T  25087039 acacttagatgatgaaatcaaaaataaaaaacctagatctatgtgaaaatcact 25086986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 37994220 - 37994188
Alignment:
Q  36 gatctatgtgaaaatcacttatttaaattgaaa 68  Q
    |||||||||||||||||||||||||||| ||||    
T  37994220 gatctatgtgaaaatcacttatttaaatcgaaa 37994188  T

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Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 19876216 - 19876131
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| |||||||| || ||||||||||||||||||||||||| ||||||| || ||||||||||||||    
T  19876216 acacttagatgatgaaatcacaaagaaaaaaccttgatctatgtgaaaatcacttatttagattgaaatattgagaaaaagatgaa 19876131  T

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Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 35580462 - 35580377
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||  |||||||| || ||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  35580462 acacttagatgatgaaatcacgaagaaaaaacctagatctatgtgaaaatcacttatttaaattgaaatagagagaaaaagatgaa 35580377  T

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Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 11196894 - 11196801
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||| | |||||||| || ||||||||||||||||||||||||| ||||||  ||||||||||||||||| | |||||||    
T  11196894 acacttagatgatgaaatcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaa--atagagaaaaagatgaagatggatgat 11196801  T

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Target: chr8; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 44100013 - 44100107
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    |||||||||||||||| ||||| ||||||||  | ||||||||||||||| ||||||||| ||||||| ||||||||||||||||| |||| ||||    
T  44100013 acacttagatgataaa-tcacaaagaaaaaacttagatctatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagaggggtgat 44100107  T

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Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 9072723 - 9072626
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaa--tctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| ||||||||  ||| ||| ||||||||| ||||||||||||||||||| | ||||||||||||||| |||| ||||    
T  9072723 acacttagatgatgaaatcacaaagaaaaaaaatctagatttatgtgaaagtcacttatttaaattgaaatagagagaaaaagatgaagaggggtgat 9072626  T

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Target: chr8; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 2655875 - 2655788
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaa--tctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||| ||| ||||||||  ||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  2655875 acacttagatgatgaaattacaaagaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaa 2655788  T

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Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 11725686 - 11725591
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||| | |||||||| || |||||||||||||| |||||||||| ||||||| | ||||||||||| ||| |||| ||||    
T  11725686 acacttagatgatgaaatcaaaaagaaaaaacctagatctatgtgaaaaacacttatttagattgaaataaagagaaaaagacgaagaggggtgat 11725591  T

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Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4808969 - 4808878
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat-ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaaggg 91  Q
    ||||||||||||| |||| ||| ||||||||  || ||||||||||||||||||||||||| ||||||| | ||| ||||||||||| ||||    
T  4808969 acacttagatgatgaaattacaaagaaaaaaagctagatctatgtgaaaatcacttatttacattgaaataaagaaaaaaagatgaagaggg 4808878  T

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Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 9619463 - 9619533
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    |||||||||  |||||||||||||||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  9619463 aaaaaatctaaatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgat 9619533  T

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Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 42448106 - 42448203
Alignment:
Q  1 acacttagatgataaaatcacagagaaa--aaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| |||||  ||| || ||||||| || |||||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  42448106 acacttagatgatgaaatcacaaagaaacaaaacctagatctatatgtaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgat 42448203  T

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Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 33896087 - 33895995
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat--ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaaggg 91  Q
    ||||||||||||| |||||||| ||||||||   || ||||||||||||| ||||||||||| ||| ||| | ||||||||||||||| ||||    
T  33896087 acacttagatgatgaaatcacaaagaaaaaaaacctagatctatgtgaaagtcacttatttagatttaaatagagagaaaaagatgaagaggg 33895995  T

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Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 17949252 - 17949156
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaa-tctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| | |||||| ||  |||||||||||||||| |||||||| ||||||| | |||||||||| |||| |||| ||||    
T  17949252 acacttagatgatgaaatcacaaataaaaaaatcaagatctatgtgaaaatcgcttatttagattgaaatagagagaaaaaggtgaagaggggtgat 17949156  T

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Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 43192425 - 43192513
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaag 89  Q
    ||||||||||||| |||||||  |||||||| || ||||||||| |||| |||||||||| ||||||| | |||||||| ||| |||||    
T  43192425 acacttagatgatgaaatcacgaagaaaaaacctagatctatgtaaaaaccacttatttagattgaaatagagagaaaatgataaaaag 43192513  T

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Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 43890205 - 43890300
Alignment:
Q  3 acttagatgataaaatcacagagaaaaaa--tctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||| |||| ||| ||||||||  ||| ||||||||| ||||||||||||||| ||||||  | ||||||||||||||| |||| ||||    
T  43890205 acttagatgatgaaattacaaagaaaaaaaatctagatctatgtcaaaatcacttatttagattgaattaaagagaaaaagatgaagaggggtgat 43890300  T

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Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 11464176 - 11464098
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaa--tctcgatctatgtgaaaatcacttatttaaattgaaacatagagaa 77  Q
    ||||||||||||| |||| ||| ||||||||  ||| ||||||||||||||||||||||| ||||||||| | ||||||    
T  11464176 acacttagatgatgaaattacaaagaaaaaaaatctagatctatgtgaaaatcacttattcaaattgaaataaagagaa 11464098  T

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Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 14907039 - 14907089
Alignment:
Q  36 gatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  14907039 gatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaa 14907089  T

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Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 44578041 - 44577955
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||| ||| |||||||| | | |||||||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  44578041 acacttagatgatgaaattacaaagaaaaaaacctagatctatgtgtaaatcacttagttagattgaaatagagagaaaaagatgaa 44577955  T

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Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 32724594 - 32724647
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaa 79  Q
    ||||||||| ||||||||||||||||||||||||| ||||||| | ||||||||    
T  32724594 aaaaaatctagatctatgtgaaaatcacttatttagattgaaatagagagaaaa 32724647  T

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Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 9498718 - 9498777
Alignment:
Q  37 atctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    |||||||||||||||||||||||| ||||||| | ||| ||||||||||| |||| ||||    
T  9498718 atctatgtgaaaatcacttatttagattgaaataaagataaaaagatgaagaggggtgat 9498777  T

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Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 34611809 - 34611723
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| |||||||| | | ||| ||||||||||||||||||||| | ||||| | | ||||||| |||||    
T  34611809 acacttagatgatgaaatcacaaagaaaaaaacctagatttatgtgaaaatcacttatttagactgaaatagaaagaaaaatatgaa 34611723  T

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Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 15597269 - 15597313
Alignment:
Q  24 agaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaa 68  Q
    |||||||| || ||||||||||||||||||||||||| |||||||    
T  15597269 agaaaaaacctagatctatgtgaaaatcacttatttagattgaaa 15597313  T

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Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 68
Target Start/End: Original strand, 39153261 - 39153292
Alignment:
Q  37 atctatgtgaaaatcacttatttaaattgaaa 68  Q
    ||||||||||||||||||||||||||||||||    
T  39153261 atctatgtgaaaatcacttatttaaattgaaa 39153292  T

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Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 17427321 - 17427382
Alignment:
Q  24 agaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatga 85  Q
    |||||||| || ||||||| |||||| |||||||||| | ||||| | ||||||||||||||    
T  17427321 agaaaaaacctagatctatttgaaaagcacttatttacactgaaatagagagaaaaagatga 17427382  T

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Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 18733980 - 18733940
Alignment:
Q  46 aaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||| ||||||||||||||| | |||||||||||||||    
T  18733980 aaaatcaattatttaaattgaaatagagagaaaaagatgaa 18733940  T

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Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 33298846 - 33298794
Alignment:
Q  15 aaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaa 67  Q
    |||||||| ||  |||| || ||||||||||||||||||||||||| ||||||    
T  33298846 aaatcacaaaggtaaaacctagatctatgtgaaaatcacttatttagattgaa 33298794  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 37565958 - 37566026
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaa 68  Q
    ||||||||||||| ||||| || |||||||| | |  |||||||||||||||| ||||||| |||||||    
T  37565958 acacttagatgatgaaatctcaaagaaaaaaacctaaatctatgtgaaaatcaattatttagattgaaa 37566026  T

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Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 64
Target Start/End: Original strand, 44414194 - 44414222
Alignment:
Q  36 gatctatgtgaaaatcacttatttaaatt 64  Q
    |||||||||||||||||||||||||||||    
T  44414194 gatctatgtgaaaatcacttatttaaatt 44414222  T

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Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 1485336 - 1485421
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||||||| ||||||||||| ||||||| | |||||||||||||||    
T  1485336 acacttagatgatgaaatcacaaagaaaaaatctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaa 1485421  T

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Target: chr7; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 433771 - 433867
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaa-tctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| |||||||| ||| ||||||||||||| ||| ||||||| ||||||| | |||||||||||||||||||||||||    
T  433771 acacttagatgatgaaatcacaaagaaaaaaatctagatctatgtgaaagtcatttatttagattgaaatagagagaaaaagatgaaaagggatgat 433867  T

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Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 23425451 - 23425546
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||| ||||| |||||||| |||||||| || ||||||||| ||||||||||||||| ||||||| ||||||||||||||||| |||| ||||    
T  23425451 acacttaaatgatgaaatcacaaagaaaaaacctagatctatgtaaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgat 23425546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 26492363 - 26492272
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat-ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaaggg 91  Q
    ||||||||||||| |||||||| ||||||||  || ||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||    
T  26492363 acacttagatgatgaaatcacaaagaaaaaaaactagatctatgtgaaaatcacttatttaaattgaaatagagagaaaaagatgaagaggg 26492272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 48207899 - 48207804
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| ||||||||  | ||||||||||||||||||||||||| ||||||| || |||||||||||||| |||| ||||    
T  48207899 acacttagatgatgaaatcacaaagaaaaaacatagatctatgtgaaaatcacttatttagattgaaatattgagaaaaagatgaagaggggtgat 48207804  T

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Target: chr7; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 1448909 - 1448994
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| | ||||||||| ||||||||||||||||||||||||| ||||||| | ||||||| |||||||    
T  1448909 acacttagatgatgaaatcacaaataaaaaatctagatctatgtgaaaatcacttatttagattgaaatagagagaaagagatgaa 1448994  T

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Target: chr7; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 45199111 - 45199196
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| ||||||||  | ||||||| ||||||||||||||||||||| ||| |||||||||||||||||    
T  45199111 acacttagatgatgaaatcacaaagaaaaaacttagatctatatgaaaatcacttatttaaattaaaatatagagaaaaagatgaa 45199196  T

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Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 35667311 - 35667396
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||| | |||||||| || ||||||||||||||||||||||||| ||||||| | ||||||||| |||||    
T  35667311 acacttagatgatgaaatcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaatatgaa 35667396  T

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Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 42067140 - 42067225
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||| | |||||||||||  |||||||||||||||||||||||| ||||||| ||||| || ||||||||    
T  42067140 acacttagatgatgaaatcagaaagaaaaaatctatatctatgtgaaaatcacttatttagattgaaatatagataacaagatgaa 42067225  T

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Target: chr7; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 22927949 - 22928045
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat-ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| ||||||||  || ||||| ||||||| ||||||||||| ||||||| | |||||||||||||||||||| ||||    
T  22927949 acacttagatgatgaaatcacaaagaaaaaaaactagatctgtgtgaaagtcacttatttagattgaaatagagagaaaaagatgaaaaggggtgat 22928045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 46822011 - 46821916
Alignment:
Q  3 acttagatgataaaatcacagagaaaaaa--tctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||| |||| ||| ||||||||  ||| ||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  46822011 acttagatgatgaaattacaaagaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgat 46821916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 2843308 - 2843397
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaaggg 91  Q
    ||||||||||||| |||| ||| | |||||| || ||||||||||||||||||||||||| ||||||| | ||||||||||||||| ||||    
T  2843308 acacttagatgatgaaattacaaa-aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggg 2843397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 35496254 - 35496340
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| |||||||| | | ||||||||||||||||||||| ||| ||||||| | |||||||||||||||    
T  35496254 acacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaaatcacttaattagattgaaatagagagaaaaagatgaa 35496340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 20116572 - 20116495
Alignment:
Q  9 atgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||| |||||||| |||||||| || ||||||||||||||||||||||||| ||||||| | | |||||||||||||    
T  20116572 atgatgaaatcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagatagaaaaagatgaa 20116495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 42311278 - 42311182
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||| ||||| |||||||| |||||||| | | |||||||||||| |||||||||||| ||||||| | |||||||| |||||| |||||||||    
T  42311278 acacttaaatgatgaaatcacaaagaaaaaaacctagatctatgtgaatatcacttatttagattgaaatagagagaaaatgatgaagagggatgat 42311182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 23085519 - 23085428
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaaggg 91  Q
    |||||||||||||||||||||| |||||||| | | ||||||||||||| ||| ||||||| ||||||| | | ||||||||||||| ||||    
T  23085519 acacttagatgataaaatcacaaagaaaaaaacctagatctatgtgaaagtcaattatttagattgaaatagaaagaaaaagatgaagaggg 23085428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 46339025 - 46338958
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggat 93  Q
    |||||| || ||||||||||||||||||||||||| ||||||| | ||||||||||||||| ||||||    
T  46339025 aaaaaagctagatctatgtgaaaatcacttatttacattgaaataaagagaaaaagatgaagagggat 46338958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17223078 - 17223136
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttattt 59  Q
    ||||||||||||| |||||||| |||||||| || ||||||||||||||||||||||||    
T  17223078 acacttagatgatgaaatcacaaagaaaaaacctagatctatgtgaaaatcacttattt 17223136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 21266388 - 21266304
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||| | ||||||   || ||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  21266388 acacttagatgatgaaatcaaaaagaaaacc-ctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaa 21266304  T

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Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 7740635 - 7740559
Alignment:
Q  3 acttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaa 79  Q
    |||||||| || |||||||| |||||||||||  |||||||||||||| | ||||||||||||||| ||||| ||||    
T  7740635 acttagattatgaaatcacaaagaaaaaatctaaatctatgtgaaaataatttatttaaattgaaatatagaaaaaa 7740559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 26583712 - 26583616
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| |||||||| | | ||| ||| ||||||||||||||||| ||||||| | ||| ||||||||||| |||| ||||    
T  26583712 acacttagatgatgaaatcacaaagaaaaaaacctagatatatatgaaaatcacttatttagattgaaatagagataaaaagatgaagaggggtgat 26583616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 3860914 - 3860867
Alignment:
Q  36 gatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagat 83  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  3860914 gatctatgtgaaaatcacttatttatattgaaacaaagagaaaaagat 3860867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 31235871 - 31235962
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaa-tcacttatttaaattgaaacatagagaaaaagatgaaaaggg 91  Q
    ||||||||||||  |||||||  ||| |||| || |||||||||||||| ||||||||||| ||||||| | ||||||||||||||| ||||    
T  31235871 acacttagatgacgaaatcacgtagagaaaacctagatctatgtgaaaaatcacttatttagattgaaatagagagaaaaagatgaagaggg 31235962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 42408360 - 42408264
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||| ||||| |||||||| |||||||| | | |||| ||||||||| || ||||||| ||||||| | ||||||||||||||| | |||||||    
T  42408360 acacttaaatgatgaaatcacaaagaaaaaaacctagatccatgtgaaaaacaattatttagattgaaataaagagaaaaagatgaagatggatgat 42408264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 32684656 - 32684597
Alignment:
Q  27 aaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||| || ||||||||||||||||||||||||| ||||||| | |||||||| ||||||    
T  32684656 aaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaacgatgaa 32684597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 17499738 - 17499797
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttattta 60  Q
    ||||||||||||| ||||||||  ||||||| || ||||| ||||||||| |||||||||    
T  17499738 acacttagatgatgaaatcacaatgaaaaaacctagatctttgtgaaaataacttattta 17499797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 17553476 - 17553417
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttattta 60  Q
    ||||||||||||| ||||||||  ||||||| || ||||| ||||||||| |||||||||    
T  17553476 acacttagatgatgaaatcacaatgaaaaaacctagatctttgtgaaaataacttattta 17553417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 68
Target Start/End: Original strand, 32522042 - 32522073
Alignment:
Q  37 atctatgtgaaaatcacttatttaaattgaaa 68  Q
    ||||||||||||||||||||||||||||||||    
T  32522042 atctatgtgaaaatcacttatttaaattgaaa 32522073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 36143849 - 36143778
Alignment:
Q  15 aaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    |||||||  |||||||| || |||||| ||||||| |||||||||| ||||||  | |||||||||||||||    
T  36143849 aaatcacgaagaaaaaacctagatctacgtgaaaaacacttatttagattgaattagagagaaaaagatgaa 36143778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 14627958 - 14628044
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| ||||||||  ||||||| | |  || ||||||||||||||||||||| ||||||  | ||| |||||||||||    
T  14627958 acacttagatgatgaaatcacaaggaaaaaaacctatatttatgtgaaaatcacttatttagattgaattagagaaaaaaagatgaa 14628044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23786573 - 23786508
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaa 67  Q
    ||||||||||||| || ||||| ||||||||| | ||| | ||||||||||||||||||| ||||||    
T  23786573 acacttagatgatgaa-tcacaaagaaaaaatttagatatgtgtgaaaatcacttatttagattgaa 23786508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 1097708 - 1097768
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    |||||| || ||||||||| |||| |||||||||||||||||| | | | |||||||||||    
T  1097708 aaaaaaactagatctatgtaaaaaacacttatttaaattgaaatagataaaaaaagatgaa 1097768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 5546317 - 5546277
Alignment:
Q  40 tatgtgaaaatcacttatttaaattgaaacatagagaaaaa 80  Q
    ||||||||||||||||||||| ||||||| | |||||||||    
T  5546317 tatgtgaaaatcacttatttagattgaaatagagagaaaaa 5546277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 17237364 - 17237459
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||| | |||||||| |||||||| || ||||||||||||||| ||||||||| ||||||| ||||||||||||||||| |||| ||||    
T  17237364 acacttagatgctgaaatcacaaagaaaaaacctagatctatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagaggggtgat 17237459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 33109826 - 33109746
Alignment:
Q  6 tagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    |||||||| |||||||| |||||||| || ||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  33109826 tagatgatgaaatcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaa 33109746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8028197 - 8028283
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctc-gatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||| | |||||||| ||  ||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  8028197 acacttagatgatgaaatcataaagaaaaaaacttagatctatgtgaaaatcacttatttagattgaaacagagagaaaaagatgaa 8028283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 23947397 - 23947482
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||| | |||||||| || ||||||||||||||||||||||||| ||||||| | |||||||| ||||||    
T  23947397 acacttagatgatgaaatcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaacgatgaa 23947482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 7876123 - 7876210
Alignment:
Q  1 acacttagatgataaaat--cacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| ||||  || ||| ||||||||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  7876123 acacttagatgatgaaattgcaaagaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaa 7876210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 7881181 - 7881268
Alignment:
Q  1 acacttagatgataaaat--cacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| ||||  || ||| ||||||||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  7881181 acacttagatgatgaaattgcaaagaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaa 7881268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 12652942 - 12652842
Alignment:
Q  1 acacttagatgataaaatcacagag-----aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatga 95  Q
    ||||||||||||| |||||||| ||     ||||||||| ||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||| |||    
T  12652942 acacttagatgatgaaatcacaaaggaaaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtga 12652843  T
Q  96 t 96  Q
    |    
T  12652842 t 12652842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 33740657 - 33740753
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||| |||||||| |||||||| | |  |||||||||||||||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  33740657 acacttagatgatgaaatcacaaagaaaaaaacctaaatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgat 33740753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4468556 - 4468466
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaaggg 91  Q
    ||||||| ||||| |||||||| |||||||| || ||||||| ||||||||||||||||| ||||||| | |||||| |||||||| ||||    
T  4468556 acacttatatgatgaaatcacaaagaaaaaacctagatctatatgaaaatcacttatttagattgaaatagagagaacaagatgaagaggg 4468466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8196486 - 8196572
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||| ||||| |||||||| |||||||| | | ||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  8196486 acacttatatgatgaaatcacaaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaa 8196572  T

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Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 25064234 - 25064147
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat--ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||| ||| ||||||||   || ||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  25064234 acacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaa 25064147  T

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Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 12165838 - 12165771
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctcgatctatgtgaaaatcacttatttaaattgaaa 68  Q
    ||||||||||||||||| |||| |||||||| ||  |||||||||||||||||||||||| |||||||    
T  12165838 acacttagatgataaaaccacaaagaaaaaacctaaatctatgtgaaaatcacttatttagattgaaa 12165771  T

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Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 8496937 - 8496867
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    |||||| || ||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||| ||||    
T  8496937 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgat 8496867  T

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Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 16419156 - 16419070
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatctc-gatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| |||||||| |   ||||||||||||| ||||||||||| ||||||| | |||||||||||||||    
T  16419156 acacttagatgatgaaatcacaaagaaaaaaacaaagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaa 16419070  T

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Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 13436759 - 13436705
Alignment:
Q  26 aaaaaatctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaa 80  Q
    ||||||| | ||| ||||||||||||||||||||||||||||| | |||||||||    
T  13436759 aaaaaatatagatttatgtgaaaatcacttatttaaattgaaatagagagaaaaa 13436705  T

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Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 17334737 - 17334687
Alignment:
Q  36 gatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||||||||||||||| ||||||| | | |||||||||||||    
T  17334737 gatctatgtgaaaatcacttatttagattgaaataaacagaaaaagatgaa 17334687  T

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Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 35001588 - 35001506
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaaga 82  Q
    ||||||||||||| |||||||| |||||||| | | ||||||||| ||| ||||||||||| ||| ||| | |||||||||||    
T  35001588 acacttagatgatgaaatcacaaagaaaaaaacatagatctatgtaaaagtcacttatttagattaaaatagagagaaaaaga 35001506  T

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Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4088458 - 4088393
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat-ctcgatctatgtgaaaatcacttatttaaattg 65  Q
    ||||||||||||| |||||| | ||||||||  || ||||||||||||||||||||||||| ||||    
T  4088458 acacttagatgatgaaatcaaaaagaaaaaaaactagatctatgtgaaaatcacttatttagattg 4088393  T

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Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 33543734 - 33543785
Alignment:
Q  37 atctatgtgaaaa-tcacttatttaaattgaaacatagagaaaaagatgaaa 87  Q
    ||||||||||||| | ||||||||| ||||||| ||||||||||||||||||    
T  33543734 atctatgtgaaaaattacttatttagattgaaatatagagaaaaagatgaaa 33543785  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 10228677 - 10228581
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||| ||||| |||||||| |||||||| | | ||| ||||| ||| ||||||||||| ||||||  | ||||| ||||||||| |||| ||||    
T  10228677 acacttaaatgatgaaatcacaaagaaaaaaacatagatatatgtaaaagtcacttatttagattgaagtagagagagaaagatgaagaggggtgat 10228581  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 28635249 - 28635297
Alignment:
Q  48 aatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||||||||||||||||| | | ||||||| ||||| |||||||||    
T  28635249 aatcacttatttaaattgaaataaaaagaaaaatatgaagagggatgat 28635297  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 34489241 - 34489150
Alignment:
Q  8 gatgataaaatcacagagaaaaaatctcgatctatgtg-aaaatcacttatt--taaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    |||||| |||||||  |||||||| || |||||||||| |||||||||||||  || ||||||  | ||||||||||||||| |||| ||||    
T  34489241 gatgatgaaatcacgaagaaaaaacctagatctatgtgaaaaatcacttatttatatattgaattagagagaaaaagatgaagaggggtgat 34489150  T

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Target: scaffold0146 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 16399 - 16487
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaat---ctcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaa 86  Q
    ||||||||||||| |||||||| ||||||||    ||  |||||||||||||||||||||||| ||||||| | ||||||| |||||||    
T  16399 acacttagatgatgaaatcacaaagaaaaaaaaacctaaatctatgtgaaaatcacttatttagattgaaatagagagaaacagatgaa 16487  T

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Target: scaffold0495 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 5396 - 5300
Alignment:
Q  1 acacttagatgataaaatcacagagaaaaaatc-tcgatctatgtgaaaatcacttatttaaattgaaacatagagaaaaagatgaaaagggatgat 96  Q
    ||||||| ||||| |||||||| |||||||| | | ||| ||||| ||| ||||||||||| ||||||  | ||||| ||||||||| |||| ||||    
T  5396 acacttaaatgatgaaatcacaaagaaaaaaacatagatatatgtaaaagtcacttatttagattgaagtagagagagaaagatgaagaggggtgat 5300  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 453891 - 453851
Alignment:
Q  40 tatgtgaaaatcacttatttaaattgaaacatagagaaaaa 80  Q
    ||||||||||||||||||||||||| ||| | |||||||||    
T  453891 tatgtgaaaatcacttatttaaattaaaataaagagaaaaa 453851  T

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