View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19475_low_49 (Length: 347)
Name: NF19475_low_49
Description: NF19475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19475_low_49 |
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Alignment Details
Target: chr6 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 13 - 331
Target Start/End: Complemental strand, 6726375 - 6726057
Alignment:
| Q |
13 |
aatatagtgctctcatacttttgcaatcgttaatacattaatactgtagaatatcacgtcacagtagaagctatgttttccagcttctactttttcccgg |
112 |
Q |
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| T |
6726375 |
aatatagtgctctcatacttttgcaatcgttaatacattaatattgtagaatatcacgtcacagttgaagctatgttttccagcttctactttttcacgg |
6726276 |
T |
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| Q |
113 |
caattgatattggaaacgcaggtttggaccatccaccgctaaaccaaacaggcaataagatcatcatgtatcgactaacttggttcaagaaaatactaaa |
212 |
Q |
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| T |
6726275 |
caattgatattggaaacgcaggtttggaccatccaccgctaaaccaaacaggcaataagatcatcatgtatcgactaacttggttcaagaaaatactaaa |
6726176 |
T |
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| Q |
213 |
caaatatatcttagaagaaccggccaaagagcctaccccgacctctccgcttagaaggatgacatataaaattaaaatctctaagtatgtgtttggatta |
312 |
Q |
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| T |
6726175 |
caaatatatcttagaagaaccagccaaagagcctaccccgacctctccgtttagaaggatgacatataaaattaaaatctctaagtatgagtttggatta |
6726076 |
T |
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| Q |
313 |
gcttttgcaccgtaaatct |
331 |
Q |
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| T |
6726075 |
gcttttgcaccgtaaatct |
6726057 |
T |
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