View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19476_high_17 (Length: 259)
Name: NF19476_high_17
Description: NF19476
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19476_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 17 - 248
Target Start/End: Original strand, 40760170 - 40760401
Alignment:
| Q |
17 |
tttttaacgtgccaactataccagcaacaaattgacacacacaccagatcctctatactcaaatgcacttcaagttcaaagctagaatatccacacttcc |
116 |
Q |
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| T |
40760170 |
tttttaacgtgccaactataccagcaacaaattgacacacacaccagatcctctatactcaaatgcacttcaagttcaaagctagaatatccacacttcc |
40760269 |
T |
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| Q |
117 |
atcttcataaccaatttcaaactggtaacagaacaagaaccaaactttagagagtnnnnnnnngagaggtattttgaaatacctcatatgtttgaagttg |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
40760270 |
atcttcataaccaatttcaaactggtaacagaacaagaaccaaactttagagagtaaaaaaaagagaggtattttgaaatacctcatatgtttgaagttg |
40760369 |
T |
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| Q |
217 |
gtgcctaaagagcaatttccttcatgtttctt |
248 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
40760370 |
gtgcctaaagagcaatttccttcatgtttctt |
40760401 |
T |
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