View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19476_high_8 (Length: 471)
Name: NF19476_high_8
Description: NF19476
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19476_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 424; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 424; E-Value: 0
Query Start/End: Original strand, 8 - 455
Target Start/End: Original strand, 30632458 - 30632904
Alignment:
| Q |
8 |
catcatcaacaacacataatcacgacagaaaaaactgtagcagcatgaacctgtttatcgccaccatcgtgattgcgttcggaatttactgctgcaatgg |
107 |
Q |
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| T |
30632458 |
catcatcaacaacacataatcatgacagaaaaaactgtagcagcatgaacctgtttatcgccaccatcgtgattgcgttcagaatttactgctgcaatgg |
30632557 |
T |
|
| Q |
108 |
agaaacagtgatagagccaaaaggaacacctgactcagctgtttgggttgttcagctttccgatcttcatctcagcgttcatcatccaaacagagccctt |
207 |
Q |
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| T |
30632558 |
agaaacagtgatagagccaaaaggaacacctgattcagctgtttgggttgttcagctttccgatcttcatctcagcgttcatcatccaaacagagccctt |
30632657 |
T |
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| Q |
208 |
gatttcaccaatcttgtgggtcacgctctttccttcatcaacccctccctcgtcctcatcaccggtgacctcacaggtacaatcattcttcacatttcat |
307 |
Q |
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| T |
30632658 |
gatttcaccaatcttgtgggtcacgctctttccttcatcaacccctccctcgtcctcatcaccggtgacctcacaggtacaatca-tcttcacatttcat |
30632756 |
T |
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| Q |
308 |
ttctcaattttcatggtagtagtaatattcaatttttgtatttctaaaactacgcatcaaataaaattatatcataaaatatctatatggtagatagtgc |
407 |
Q |
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| T |
30632757 |
ttctcaattttcatggtactagtaatattcaatttttgtatttctaaaactacgcatcaaataaaattatatcataaaatatctatatggtagatagtgc |
30632856 |
T |
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| Q |
408 |
atgccatttttatttgattacgttggtgcataaaaatcaacatgatag |
455 |
Q |
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| T |
30632857 |
atgccatttttatttgattacgttggtgcataaaaatcaacatgatag |
30632904 |
T |
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