View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19476_low_14 (Length: 301)
Name: NF19476_low_14
Description: NF19476
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19476_low_14 |
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Alignment Details
Target: chr5 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 79 - 291
Target Start/End: Original strand, 39025040 - 39025252
Alignment:
| Q |
79 |
aattgagaaaagtgatcacactttaatacattgttgttatgttgttctcatccacatcatcctaaagttttagatttttactcgcccaaaagctccgaag |
178 |
Q |
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| T |
39025040 |
aattgagaaaagtgatcacactttaatacattgttgttattttgttctcatccacatcatcctaaagttttagatttttactcgtccaaaagctccgagg |
39025139 |
T |
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| Q |
179 |
tgatagatatactccatatgatttcaattataaataactttctgctttgtaggttgattgaataaattaagatgatgtttatcatttattcattgaataa |
278 |
Q |
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| T |
39025140 |
tgatagatatactccacatgatttcaattataaacaactttccgctttctaagttcattgaataaattaagatcatgtttatcatttattcattgaataa |
39025239 |
T |
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| Q |
279 |
aagttactatatt |
291 |
Q |
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|||| |||||||| |
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| T |
39025240 |
aagtgactatatt |
39025252 |
T |
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