View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19476_low_15 (Length: 265)
Name: NF19476_low_15
Description: NF19476
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19476_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 13 - 244
Target Start/End: Original strand, 51414248 - 51414479
Alignment:
| Q |
13 |
agaaggtcatttttatttttagttgtgtaattgggttgacgaggaacgtgaatagtcatcaccaatgcatgacactatgatatatttaataaactgtttc |
112 |
Q |
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| T |
51414248 |
agaaggtcatttttatttttagttgtgtaattaggttgacgagggacgtaaatagtcatcaccaatgcatgacactatgatatatttaataaactgtttc |
51414347 |
T |
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| Q |
113 |
ttctgacatgtttcgaggcaaatcaacacataattgaaacaaattcataagagaatgaaaatgactatgtgtaaataaggaccgatgagtgggcaggaag |
212 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
51414348 |
ttctgacatgtttcgaagcaaatcaacacataattgaaacaaattcataagagaatgaaaatgactatgtgtaaataaggaccgatgagtgagcaggaag |
51414447 |
T |
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| Q |
213 |
gttcaagaagtggatctcaatgggattggtgg |
244 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
51414448 |
gttcaagaagtggatctcaatgggattggtgg |
51414479 |
T |
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