View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19477_low_13 (Length: 344)
Name: NF19477_low_13
Description: NF19477
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19477_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 17 - 321
Target Start/End: Original strand, 9771759 - 9772063
Alignment:
| Q |
17 |
atttgtggatatagtttttcttagtatgtagtagagtcatgtcataaatcatatctaattaagctgatatttccgttttgctactttggaggctgttcta |
116 |
Q |
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| T |
9771759 |
atttgtggatatagtttttcttagtatgtagtagagtcatgtcataaatcatatataattaagctgatatttccgttttgctactttggaggctgttcta |
9771858 |
T |
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| Q |
117 |
aactttttatcctgtcacaaacacaataatggtactatgactttgaagggcacataacagaaaaaagggggactaaaattaataaattcacggagcataa |
216 |
Q |
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| T |
9771859 |
aactttttatcctgtcacaaacacaataatggtactatgactttgaagggcacatagcagaaaaaagggggactaaaattaataaattcacggagcataa |
9771958 |
T |
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| Q |
217 |
ttaaagaaaggttgatatatagaaccttcacataaattacataacctttaaatttaatatcttagatgacaagttatccttgtggtcctctttggtagat |
316 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
9771959 |
ttaaagaaagattgatatatagaaccttcacataaattacataacctttaaatttaatatcttagatgacaagttacacttgtggtcctctttggtagat |
9772058 |
T |
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| Q |
317 |
aataa |
321 |
Q |
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||||| |
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| T |
9772059 |
aataa |
9772063 |
T |
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