View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19477_low_21 (Length: 255)
Name: NF19477_low_21
Description: NF19477
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19477_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 3 - 237
Target Start/End: Complemental strand, 41860615 - 41860381
Alignment:
| Q |
3 |
catcattcaacagtgaatagtctctaacagaaaatttggtgatcatataaggtgaattctacattctcaaactcaatttttcttatagagtagtcagaga |
102 |
Q |
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| T |
41860615 |
catcatttaacagtgaatagtctttaacacgaaatttgatgatcatataaggtgaattctacattctcaaactcaatttttcttacacagtagtcagaga |
41860516 |
T |
|
| Q |
103 |
tcaaactcatcatcacttgtttcaattaaagcgaccaaattctttactatttgaaccaaccatatgttggtaagctattctatgatataatgacgnnnnn |
202 |
Q |
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|||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
41860515 |
tcaaactcatcaccacttgtttaaattaaggcgaccaaattctttactatttgaaccaaccatatgttggtaagctattctataatataatgacgttttt |
41860416 |
T |
|
| Q |
203 |
nnggtacggataatgacattttaaagcaggtattt |
237 |
Q |
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||||| |||||||||||||||||||||||||| |
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| T |
41860415 |
ttggtacaaataatgacattttaaagcaggtattt |
41860381 |
T |
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