View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19478_low_1 (Length: 526)

Name: NF19478_low_1
Description: NF19478
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19478_low_1
NF19478_low_1
[»] chr5 (30 HSPs)
chr5 (147-510)||(13973726-13974077)
chr5 (19-149)||(13974238-13974374)
chr5 (44-114)||(3306090-3306164)
chr5 (36-107)||(21319383-21319458)
chr5 (44-111)||(39566184-39566255)
chr5 (36-114)||(14620567-14620649)
chr5 (48-114)||(27797779-27797849)
chr5 (44-87)||(21195408-21195451)
chr5 (44-107)||(3025012-3025079)
chr5 (44-111)||(26660756-26660827)
chr5 (44-111)||(26932349-26932420)
chr5 (35-108)||(34534364-34534440)
chr5 (54-107)||(24280998-24281055)
chr5 (54-107)||(24381157-24381214)
chr5 (44-87)||(2729867-2729910)
chr5 (44-87)||(6519005-6519048)
chr5 (44-87)||(13761586-13761629)
chr5 (37-111)||(38369874-38369951)
chr5 (44-107)||(7317033-7317100)
chr5 (44-107)||(10345013-10345080)
chr5 (44-107)||(42104144-42104211)
chr5 (44-114)||(36164885-36164959)
chr5 (44-114)||(42662021-42662094)
chr5 (39-111)||(7579945-7580021)
chr5 (44-87)||(27600428-27600471)
chr5 (36-111)||(39504723-39504803)
chr5 (37-86)||(1309432-1309481)
chr5 (37-86)||(34208968-34209017)
chr5 (38-87)||(36073705-36073754)
chr5 (44-80)||(39335285-39335321)
[»] chr4 (43 HSPs)
chr4 (37-111)||(50203077-50203153)
chr4 (44-111)||(45043673-45043744)
chr4 (36-111)||(52848131-52848210)
chr4 (37-114)||(34316220-34316301)
chr4 (44-107)||(40345432-40345499)
chr4 (36-107)||(52957867-52957942)
chr4 (44-87)||(2493131-2493174)
chr4 (44-107)||(1819567-1819634)
chr4 (44-107)||(10573239-10573306)
chr4 (44-107)||(19451296-19451363)
chr4 (44-107)||(20448044-20448111)
chr4 (44-107)||(30261264-30261331)
chr4 (45-107)||(19878653-19878719)
chr4 (36-85)||(19930745-19930794)
chr4 (37-114)||(6991340-6991420)
chr4 (46-107)||(39982108-39982173)
chr4 (44-88)||(47817766-47817810)
chr4 (36-107)||(49080554-49080628)
chr4 (37-81)||(56373655-56373699)
chr4 (44-87)||(24940908-24940951)
chr4 (44-111)||(31917957-31918028)
chr4 (44-111)||(44571950-44572021)
chr4 (44-107)||(53814582-53814649)
chr4 (44-111)||(54042268-54042339)
chr4 (37-86)||(11364256-11364305)
chr4 (35-87)||(22220435-22220487)
chr4 (44-111)||(37654411-37654481)
chr4 (44-86)||(620262-620305)
chr4 (51-107)||(4505342-4505402)
chr4 (44-87)||(8971071-8971114)
chr4 (44-114)||(18429988-18430061)
chr4 (44-87)||(25123811-25123854)
chr4 (36-83)||(41920386-41920433)
chr4 (36-86)||(42605604-42605652)
chr4 (44-87)||(50623112-50623155)
chr4 (44-107)||(29519610-29519677)
chr4 (19-86)||(34413603-34413674)
chr4 (37-87)||(41496234-41496284)
chr4 (44-111)||(47458470-47458541)
chr4 (44-84)||(7906081-7906121)
chr4 (44-109)||(21864468-21864537)
chr4 (44-109)||(21920329-21920398)
chr4 (45-111)||(30780218-30780281)
[»] chr7 (30 HSPs)
chr7 (32-109)||(27947568-27947649)
chr7 (36-87)||(29531006-29531057)
chr7 (44-114)||(10476134-10476208)
chr7 (44-87)||(24133209-24133252)
chr7 (39-111)||(30312459-30312535)
chr7 (45-105)||(41137735-41137799)
chr7 (35-111)||(42285909-42285989)
chr7 (44-107)||(715942-716009)
chr7 (44-111)||(13405206-13405277)
chr7 (44-111)||(19105080-19105151)
chr7 (44-107)||(37490789-37490856)
chr7 (44-107)||(45948709-45948776)
chr7 (44-114)||(44453133-44453207)
chr7 (44-87)||(31418592-31418635)
chr7 (44-87)||(31929939-31929982)
chr7 (44-107)||(1741996-1742063)
chr7 (44-111)||(24680129-24680200)
chr7 (37-87)||(40339488-40339537)
chr7 (44-107)||(42880013-42880080)
chr7 (44-114)||(25440870-25440944)
chr7 (37-111)||(33939806-33939884)
chr7 (37-81)||(6563486-6563530)
chr7 (50-111)||(48843553-48843618)
chr7 (44-87)||(33682558-33682601)
chr7 (44-87)||(37815753-37815796)
chr7 (44-87)||(40753507-40753550)
chr7 (44-87)||(48684752-48684795)
chr7 (48-107)||(22298001-22298064)
chr7 (44-111)||(34012162-34012233)
chr7 (44-86)||(35777849-35777891)
[»] chr3 (33 HSPs)
chr3 (36-111)||(41850391-41850470)
chr3 (37-114)||(30431118-30431199)
chr3 (36-114)||(33024370-33024452)
chr3 (36-87)||(35557828-35557879)
chr3 (36-87)||(36729880-36729931)
chr3 (44-107)||(3152884-3152951)
chr3 (44-111)||(45213800-45213871)
chr3 (44-111)||(50038249-50038320)
chr3 (44-111)||(50088394-50088465)
chr3 (36-111)||(53200751-53200829)
chr3 (37-111)||(42071986-42072064)
chr3 (44-111)||(30934887-30934955)
chr3 (44-87)||(11393574-11393617)
chr3 (44-87)||(27067637-27067680)
chr3 (36-87)||(36460835-36460886)
chr3 (47-111)||(47137964-47138032)
chr3 (36-111)||(33194101-33194180)
chr3 (37-87)||(36844813-36844863)
chr3 (44-107)||(51398015-51398082)
chr3 (44-113)||(40487827-40487900)
chr3 (44-87)||(4759020-4759063)
chr3 (44-87)||(11019904-11019947)
chr3 (44-87)||(30426402-30426445)
chr3 (44-87)||(42571607-42571650)
chr3 (44-87)||(47895422-47895465)
chr3 (44-87)||(48901749-48901792)
chr3 (44-87)||(48903315-48903358)
chr3 (44-107)||(38016380-38016446)
chr3 (44-111)||(39356886-39356957)
chr3 (44-107)||(44676226-44676293)
chr3 (44-81)||(4392231-4392268)
chr3 (44-111)||(45566807-45566871)
chr3 (35-87)||(45460692-45460744)
[»] scaffold2107 (1 HSPs)
scaffold2107 (44-114)||(594-668)
[»] chr2 (38 HSPs)
chr2 (36-114)||(42004889-42004971)
chr2 (36-114)||(45081973-45082055)
chr2 (36-111)||(6220477-6220556)
chr2 (44-106)||(27964451-27964517)
chr2 (37-111)||(29411697-29411775)
chr2 (44-87)||(16807598-16807641)
chr2 (44-87)||(16846879-16846922)
chr2 (44-107)||(18579172-18579239)
chr2 (44-111)||(18719513-18719584)
chr2 (44-111)||(45301766-45301837)
chr2 (37-107)||(12566054-12566128)
chr2 (44-87)||(441312-441355)
chr2 (44-87)||(4658314-4658357)
chr2 (44-114)||(7874725-7874798)
chr2 (44-87)||(12342122-12342165)
chr2 (44-87)||(16463113-16463156)
chr2 (36-87)||(29396753-29396804)
chr2 (44-87)||(34546412-34546455)
chr2 (44-86)||(13562024-13562066)
chr2 (36-111)||(29808813-29808892)
chr2 (44-111)||(32228092-32228163)
chr2 (44-82)||(36685821-36685859)
chr2 (44-111)||(38926607-38926678)
chr2 (44-107)||(43427368-43427435)
chr2 (44-107)||(43971509-43971576)
chr2 (37-111)||(4469502-4469580)
chr2 (44-109)||(7644649-7644718)
chr2 (19-84)||(8540070-8540139)
chr2 (48-87)||(4133053-4133092)
chr2 (44-87)||(22620415-22620458)
chr2 (36-87)||(25383558-25383608)
chr2 (44-87)||(36178005-36178048)
chr2 (44-86)||(4288792-4288834)
chr2 (36-86)||(12393994-12394044)
chr2 (53-111)||(5717514-5717576)
chr2 (37-86)||(9391632-9391681)
chr2 (37-86)||(19164387-19164436)
chr2 (35-87)||(35799232-35799283)
[»] scaffold0026 (1 HSPs)
scaffold0026 (37-87)||(4170-4220)
[»] chr8 (29 HSPs)
chr8 (44-107)||(9304714-9304781)
chr8 (37-86)||(5295480-5295529)
chr8 (44-114)||(43084708-43084782)
chr8 (44-113)||(514873-514946)
chr8 (36-87)||(4989507-4989558)
chr8 (36-87)||(31899321-31899372)
chr8 (44-111)||(4760639-4760710)
chr8 (36-111)||(17920957-17921036)
chr8 (36-111)||(31693694-31693773)
chr8 (44-107)||(39463264-39463331)
chr8 (44-107)||(39698747-39698814)
chr8 (36-87)||(35356336-35356387)
chr8 (44-107)||(15160527-15160594)
chr8 (44-86)||(34796759-34796801)
chr8 (36-107)||(40228579-40228654)
chr8 (44-111)||(40362436-40362507)
chr8 (37-107)||(6374419-6374492)
chr8 (44-113)||(34156533-34156607)
chr8 (44-88)||(19574415-19574459)
chr8 (44-87)||(9880582-9880625)
chr8 (44-87)||(19438265-19438308)
chr8 (44-87)||(29025827-29025870)
chr8 (44-87)||(36921386-36921429)
chr8 (53-109)||(40400066-40400126)
chr8 (44-87)||(43448745-43448788)
chr8 (44-111)||(37559614-37559685)
chr8 (58-113)||(43974886-43974945)
chr8 (37-87)||(45358968-45359018)
chr8 (39-87)||(44713563-44713611)
[»] chr6 (18 HSPs)
chr6 (44-107)||(234039-234106)
chr6 (44-111)||(32193703-32193774)
chr6 (44-111)||(24163795-24163866)
chr6 (44-107)||(29399951-29400018)
chr6 (45-111)||(31233707-31233777)
chr6 (45-106)||(12063592-12063657)
chr6 (44-87)||(3988824-3988867)
chr6 (44-87)||(10520720-10520763)
chr6 (44-87)||(29713487-29713530)
chr6 (37-87)||(577090-577140)
chr6 (37-87)||(17267681-17267731)
chr6 (44-114)||(8030640-8030714)
chr6 (37-111)||(9940649-9940727)
chr6 (37-111)||(18737164-18737242)
chr6 (44-114)||(24556009-24556083)
chr6 (44-87)||(19675009-19675052)
chr6 (44-87)||(34513684-34513727)
chr6 (44-82)||(1134959-1134997)
[»] chr1 (46 HSPs)
chr1 (44-111)||(12591161-12591232)
chr1 (44-111)||(15823035-15823106)
chr1 (44-113)||(25487087-25487160)
chr1 (46-111)||(44258588-44258657)
chr1 (44-111)||(9915444-9915515)
chr1 (44-107)||(26352160-26352227)
chr1 (44-111)||(26595148-26595219)
chr1 (44-107)||(29567901-29567968)
chr1 (37-87)||(34110556-34110606)
chr1 (44-107)||(40717375-40717442)
chr1 (44-107)||(50094234-50094301)
chr1 (44-85)||(43759363-43759404)
chr1 (47-107)||(32807020-32807084)
chr1 (36-87)||(52125207-52125258)
chr1 (51-106)||(14593406-14593465)
chr1 (44-107)||(24611599-24611666)
chr1 (44-107)||(34032159-34032226)
chr1 (44-107)||(34047314-34047381)
chr1 (44-111)||(44108600-44108671)
chr1 (44-111)||(44557123-44557194)
chr1 (44-107)||(50249315-50249382)
chr1 (37-87)||(52066361-52066410)
chr1 (44-114)||(10842778-10842852)
chr1 (36-107)||(15573612-15573691)
chr1 (44-81)||(31699368-31699405)
chr1 (36-114)||(33622436-33622518)
chr1 (43-87)||(25151844-25151888)
chr1 (44-87)||(16757273-16757316)
chr1 (44-87)||(25560951-25560994)
chr1 (44-87)||(35848012-35848055)
chr1 (44-87)||(46286897-46286940)
chr1 (44-87)||(48025333-48025376)
chr1 (44-87)||(49426494-49426537)
chr1 (44-87)||(49468790-49468833)
chr1 (44-87)||(52024313-52024356)
chr1 (44-111)||(1740720-1740791)
chr1 (37-87)||(27209018-27209068)
chr1 (45-87)||(38531377-38531419)
chr1 (44-111)||(46554799-46554870)
chr1 (44-86)||(48009040-48009082)
chr1 (44-86)||(52706911-52706953)
chr1 (50-87)||(13408350-13408387)
chr1 (37-86)||(18794614-18794663)
chr1 (39-87)||(2610904-2610952)
chr1 (44-111)||(7214115-7214183)
chr1 (39-87)||(49402945-49402993)
[»] scaffold0015 (1 HSPs)
scaffold0015 (44-114)||(21162-21236)
[»] scaffold0136 (1 HSPs)
scaffold0136 (45-111)||(9453-9516)
[»] scaffold0502 (1 HSPs)
scaffold0502 (37-113)||(645-725)
[»] scaffold0565 (1 HSPs)
scaffold0565 (44-111)||(9722-9793)
[»] scaffold0110 (1 HSPs)
scaffold0110 (44-107)||(24821-24888)
[»] scaffold0300 (1 HSPs)
scaffold0300 (37-114)||(4563-4644)
[»] scaffold0182 (1 HSPs)
scaffold0182 (44-87)||(18335-18378)
[»] scaffold0332 (1 HSPs)
scaffold0332 (44-107)||(3891-3958)
[»] scaffold0294 (1 HSPs)
scaffold0294 (44-107)||(3585-3652)
[»] scaffold0983 (1 HSPs)
scaffold0983 (37-81)||(760-804)
[»] scaffold0078 (1 HSPs)
scaffold0078 (36-86)||(1486-1536)
[»] scaffold0048 (1 HSPs)
scaffold0048 (36-107)||(62638-62713)


Alignment Details
Target: chr5 (Bit Score: 291; Significance: 1e-163; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 147 - 510
Target Start/End: Complemental strand, 13974077 - 13973726
Alignment:
Q  147 gggaggagtacattgaagcgtcacagcgaccacaattttttgtgtaaacaaatatcgtgcaactgcatagattagttcctcgaggctgatcggtccataa 246  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  13974077 gggaggagtacattgaagcgtcactacgaccacaattttttgtgtaaacaaagatcgtgcaactgcatagattagttcctcgaagctgatcggtccataa 13973978  T
Q  247 tttacgacaaaatagttaagttttctctcaagagatttataattgctatactccattgataaatcaaactcaagacttttagtaagttggacgagattca 346  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13973977 tttacgacaaaatagttaagttttctctcaagagatttataattgctatactccattgataaatcaaactcaagacttttagtaagttggacgagattca 13973878  T
Q  347 atactatcttatctaaacgctattgggtacgaggagaaggatttaaaaccttattccatgtagtatttgagaagatctgtaaacacaataaaataaggag 446  Q
    | |||||            |||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13973877 aaactat------------ctattgggtacgagggcaaggatttaaaaccttattccatgtagtgtttgagaagatctgtaaacacaataaaataaggag 13973790  T
Q  447 ctccatgtatttctcgtgttaagattccccttctaattggccttaataaggaacctgaagtttt 510  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13973789 ctccatgtatttctcgtgttaagattccccttctaattggccttaataaggaacctgaagtttt 13973726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 13974374 - 13974238
Alignment:
Q  19 taatattttagaagtagcata----ataataattgaagggtacaattgaaaagataaaattattattgcattgctaaaagtgacattcattttaaaataa 114  Q
    ||||||||| |||||||||||    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13974374 taatattttggaagtagcatatataataataattgaatggtacaattgaaaagataaaattattattgcattgctaaaagtgacattcattttaaaataa 13974275  T
Q  115 --nnnnnnngctaaagtaacattcattttgagatggg 149  Q
             | ||||||||||||||||||||||||||    
T  13974274 tttttttttgttaaagtaacattcattttgagatggg 13974238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 3306090 - 3306164
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaataa 114  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    || ||||||||||||||||||||||||    
T  3306090 taattgaagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattttaaaataa 3306164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 21319383 - 21319458
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcatt----gctaaaagtgacattcatttt 107  Q
    ||||||| ||||||||||||||||||||||||| ||| |||||||||||||    ||| |||||||||||||||||    
T  21319383 cataatattaattgaagggtacaattgaaaagaaaaagttattattgcattggaagctgaaagtgacattcatttt 21319458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 39566255 - 39566184
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||||||    
T  39566255 taattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttaaaa 39566184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 14620567 - 14620649
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaataa 114  Q
    ||||||| |||||||| |||||||||||||||| ||| ||||||||||||||    || ||||||||||||||||| ||||||    
T  14620567 cataatattaattgaaaggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaataa 14620649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 114
Target Start/End: Complemental strand, 27797849 - 27797779
Alignment:
Q  48 tgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaataa 114  Q
    ||||||||||||||||||||| ||| ||||||||||||||    || ||||||||||||||||||||||||    
T  27797849 tgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttaaaataa 27797779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 21195451 - 21195408
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  21195451 taattgaagggtacaattgaaaagaaaaaattattattgcattg 21195408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 3025012 - 3025079
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||    ||||||||||||||||||||    
T  3025012 taattggagggtacaattgaaaagaaaaagttattattgcattggaaactaaaagtgacattcatttt 3025079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 26660827 - 26660756
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||     | |||||||||||||||||||||    
T  26660827 taattgaagggtacaattgaaaagaaaaagttattattgcattgaaaattgaaagtgacattcattttaaaa 26660756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 26932420 - 26932349
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||     | |||||||||||||||||||||    
T  26932420 taattgaagggtacaattgaaaagaaaaagttattattgcattgaaaattgaaagtgacattcattttaaaa 26932349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 34534440 - 34534364
Alignment:
Q  35 gcataataataattgaagggtacaattgaaaag-ataaaattattattgcattg--ctaaaagtgacattcatttta 108  Q
    ||||| || |||||||||||||||||||||||| | ||||||||||||||||||   | ||||||||||||||||||    
T  34534440 gcatagtattaattgaagggtacaattgaaaagaaaaaaattattattgcattggaatgaaagtgacattcatttta 34534364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 107
Target Start/End: Complemental strand, 24281055 - 24280998
Alignment:
Q  54 gtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||| ||||||||||||||||||    ||||||||||||||||||||    
T  24281055 gtacaattgaaaagaaaaaattattattgcattggaaactaaaagtgacattcatttt 24280998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 24381157 - 24381214
Alignment:
Q  54 gtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||| ||||||||||||||||||    ||||||||||||||||||||    
T  24381157 gtacaattgaaaagaaaaaattattattgcattggaaactaaaagtgacattcatttt 24381214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 2729867 - 2729910
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    
T  2729867 taattgaagggtacaattgaaaagaaaaagttattattgcattg 2729910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 6519048 - 6519005
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    
T  6519048 taattgaagggtacaattgaaaagaaaaagttattattgcattg 6519005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 13761629 - 13761586
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    
T  13761629 taattgaagggtacaattgaaaagaaaaatttattattgcattg 13761586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 38369951 - 38369874
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg---ctaaaagtgacattcattttaaaa 111  Q
    |||||| ||||||||| |||||||| |||||| ||| ||||||||||||||    ||||||||| |||||||||||||    
T  38369951 ataatattaattgaagagtacaatttaaaagaaaaagttattattgcattggaaataaaagtgatattcattttaaaa 38369874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 7317100 - 7317033
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  7317100 taattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 7317033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 10345013 - 10345080
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  10345013 taattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 10345080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 42104144 - 42104211
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  42104144 taattgaagggtaaaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 42104211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 36164959 - 36164885
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaataa 114  Q
    ||||||||||||| ||||||||||| ||| |||||| |||||||    || ||| ||||||||||||||||||||    
T  36164959 taattgaagggtataattgaaaagaaaaagttattactgcattggaaactgaaaatgacattcattttaaaataa 36164885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 42662021 - 42662094
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaataa 114  Q
    ||||||||||||||||||||||| | |||||||||||| |||||    |||||| | ||||||||||||||||||    
T  42662021 taattgaagggtacaattgaaaa-aaaaaattattattacattgaaaactaaaaataacattcattttaaaataa 42662094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 7579945 - 7580021
Alignment:
Q  39 aataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    |||| ||||||||| ||||||||||||||| ||| ||||||||| ||||    || ||||| |||||||||||||||    
T  7579945 aatattaattgaagagtacaattgaaaagaaaaagttattattgtattgaaaactgaaagtaacattcattttaaaa 7580021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 27600471 - 27600428
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||||    
T  27600471 taattgaagggtataattgaaaagaaaaagttattattgcattg 27600428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 39504803 - 39504723
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattatt-attgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||| ||||| |||| |||||||||||||| ||| ||||| |||||||||    || |||||||||||||||||||||    
T  39504803 cataatattaattaaaggatacaattgaaaagaaaaagttattaattgcattggaaactgaaagtgacattcattttaaaa 39504723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 1309432 - 1309481
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcatt 86  Q
    |||||| |||||||| |||||| || |||||| |||||||||||||||||    
T  1309432 ataatattaattgaaaggtacacttaaaaagaaaaaattattattgcatt 1309481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 34208968 - 34209017
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcatt 86  Q
    |||||| ||||||||||||| ||||||||| | ||| |||||||||||||    
T  34208968 ataatattaattgaagggtataattgaaaaaaaaaagttattattgcatt 34209017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 36073705 - 36073754
Alignment:
Q  38 taataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||| |||||||| | |||||||||||||| ||| ||||||||||||||    
T  36073705 taatattaattgaatgatacaattgaaaagaaaaagttattattgcattg 36073754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 39335285 - 39335321
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattat 80  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  39335285 taattgaagggtacaattgaaaagaaaaagttattat 39335321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 50203153 - 50203077
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg--ctaaaagtgacattcattttaaaa 111  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||||||||  || |||||||||||||||||||||    
T  50203153 ataatattaattgaagggtacaattgaaaagaaaaagttattattgcattggactgaaagtgacattcattttaaaa 50203077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 45043673 - 45043744
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    || |||||||||||||||||||||    
T  45043673 taattgaagggtacaattgaaaagaaaaaattattattgcattgaaaactgaaagtgacattcattttaaaa 45043744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 52848131 - 52848210
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||     | |||||||||||||||||||||    
T  52848131 cataatattaattgaagggtacaattgaaaagaaaaaattattattgcattggaaattgaaagtgacattcattttaaaa 52848210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 34316301 - 34316220
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaataa 114  Q
    |||||| ||||||||||||||||||||||| | ||||||||||||||||||    || ||||||||||| ||||||||||||    
T  34316301 ataatattaattgaagggtacaattgaaaataaaaaattattattgcattggaaactgaaagtgacatttattttaaaataa 34316220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 40345432 - 40345499
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    || |||||||||||||||||    
T  40345432 taattgaagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcatttt 40345499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 52957867 - 52957942
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  52957867 cataatattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 52957942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 2493174 - 2493131
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  2493174 taattgaagggtacaattgaaaagaaaaaattattattgcattg 2493131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 1819634 - 1819567
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  1819634 taattgaagggtacaattgaaaagaaaaatttattattgcattggaaactgaaagtgacattcatttt 1819567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 10573239 - 10573306
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    |||||| |||||||||||||    
T  10573239 taattgaagggtacaattgaaaagaaaaagttattattgcattggaaactaaaaatgacattcatttt 10573306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 19451296 - 19451363
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  19451296 taattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 19451363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 20448111 - 20448044
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||    || |||||||||||||||||    
T  20448111 taattgaagggtataattgaaaagaaaaaattattattgcattgaaaactgaaagtgacattcatttt 20448044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 30261331 - 30261264
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||||||||||||| || |||||||||||||||    || |||||||||||||||||    
T  30261331 taattgaagggtacaattgaaaagaaaacattattattgcattggaaactgaaagtgacattcatttt 30261264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 19878719 - 19878653
Alignment:
Q  45 aattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||||||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  19878719 aattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 19878653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 19930794 - 19930745
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcat 85  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||||||||||    
T  19930794 cataatattaattgaagggtacaattgaaaagaaaaagttattattgcat 19930745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 6991340 - 6991420
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaataa 114  Q
    |||||| ||| ||||||||||| ||||||||| ||||||||||||| ||||    || ||||||||||||||||||||||||    
T  6991340 ataatattaactgaagggtaca-ttgaaaagaaaaaattattattgtattgaaaactgaaagtgacattcattttaaaataa 6991420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 39982173 - 39982108
Alignment:
Q  46 attgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  39982173 attgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 39982108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 47817810 - 47817766
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattgc 88  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||    
T  47817810 taattgaagggtacaattgaaaagaaaaagttattattgcattgc 47817766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 49080554 - 49080628
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcatt---gctaaaagtgacattcatttt 107  Q
    ||||||| ||||||||||||||||||||||| | ||| |||||||||||||    || |||||||||||||||||    
T  49080554 cataatattaattgaagggtacaattgaaaataaaaagttattattgcattaaaactgaaagtgacattcatttt 49080628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 56373655 - 56373699
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattatt 81  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||    
T  56373655 ataatattaattgaagggtacaattgaaaagaaaaaattattatt 56373699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 24940951 - 24940908
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    
T  24940951 taattgaagggtacaattgaaaagaaaaagttattattgcattg 24940908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 31918028 - 31917957
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcatt----gctaaaagtgacattcattttaaaa 111  Q
    ||||||||||||| ||||||||||| |||| ||||||||||||    ||| ||||||| |||||||||||||    
T  31918028 taattgaagggtaaaattgaaaagaaaaaactattattgcattggaagctgaaagtgaaattcattttaaaa 31917957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 44571950 - 44572021
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||||||||||||||||||||| ||| || |||||||||||    || |||| ||||||||||||||||    
T  44571950 taattgaagggtacaattgaaaagaaaaagtttttattgcattggaaactgaaagcgacattcattttaaaa 44572021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 53814582 - 53814649
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||||||||||||||| |||| | ||| ||||||||||||||    ||||||||||||||||||||    
T  53814582 taattgaagggtacaattaaaaataaaaagttattattgcattgttaactaaaagtgacattcatttt 53814649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 54042268 - 54042339
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    |||||||| |||||||||||||||| |||||||||||| |||||    |  |||||||||||||||||||||    
T  54042268 taattgaaaggtacaattgaaaagaaaaaattattattacattggaaaccgaaagtgacattcattttaaaa 54042339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 11364305 - 11364256
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcatt 86  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||| ||||    
T  11364305 ataatattaattgaagggtacaattgaaaagaaaaagttattatttcatt 11364256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 22220435 - 22220487
Alignment:
Q  35 gcataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||| || |||||| |||||||||||||||||| ||| ||||||||||||||    
T  22220435 gcatagtattaattggagggtacaattgaaaagaaaaagttattattgcattg 22220487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 37654481 - 37654411
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattgctaa---aagtgacattcattttaaaa 111  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||  ||   || |||||||||||||||||    
T  37654481 taattgaagggtacaattgaaaagaaaaagttattattgtattggaaactgaattgacattcattttaaaa 37654411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 620262 - 620305
Alignment:
Q  44 taattgaagggtacaattgaaaag-ataaaattattattgcatt 86  Q
    |||||||||||||||||||||||| | |||||||||||||||||    
T  620262 taattgaagggtacaattgaaaagaaaaaaattattattgcatt 620305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 4505402 - 4505342
Alignment:
Q  51 agggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  4505402 agggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 4505342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 8971114 - 8971071
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||| ||||||||||||||| |||||||||||| |||||    
T  8971114 taattgaagagtacaattgaaaagaaaaaattattatttcattg 8971071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 18430061 - 18429988
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg---ctaaaagtgacattcattttaaaataa 114  Q
    ||||||||||||||||||||||||| ||| ||||||||| || |   |  ||||| ||||||||||||||||||    
T  18430061 taattgaagggtacaattgaaaagaaaaagttattattgaatgggaaccgaaagtaacattcattttaaaataa 18429988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 25123811 - 25123854
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||||||||||||| |||||||| ||||||||||||| ||||    
T  25123811 taattgaagggtacaactgaaaagaaaaaattattattgtattg 25123854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 41920386 - 41920433
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgc 83  Q
    ||||||| ||||||||||||| ||||||||||| ||| ||||||||||    
T  41920386 cataatattaattgaagggtataattgaaaagaaaaagttattattgc 41920433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 42605652 - 42605604
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcatt 86  Q
    ||||||| ||||||||||||||||||||||||| ||||  |||||||||||    
T  42605652 cataatattaattgaagggtacaattgaaaagaaaaaa--attattgcatt 42605604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 50623155 - 50623112
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||||    
T  50623155 taattgaagggtataattgaaaagaaaaagttattattgcattg 50623112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 29519610 - 29519677
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||||||| |||||||||||| | ||| ||||||||||||||    |||||||||||||| |||||    
T  29519610 taattgaaggatacaattgaaaataaaaagttattattgcattggaaactaaaagtgacatttatttt 29519677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 34413603 - 34413674
Alignment:
Q  19 taatattttagaagtagc----ataataataattgaagggtacaattgaaaagataaaattattattgcatt 86  Q
    |||||||||||||||||     |||||| |||||||| |||||||||||||| | ||| |||||||||||||    
T  34413603 taatattttagaagtagtgtatataatattaattgaatggtacaattgaaaataaaaagttattattgcatt 34413674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 41496284 - 41496234
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||| ||||||||| ||||||||||||||| ||| ||||||||| ||||    
T  41496284 ataatattaattgaagagtacaattgaaaagaaaaagttattattgtattg 41496234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 47458470 - 47458541
Alignment:
Q  44 taattgaagggtacaattgaaaag-ataaaattattattgcattg---ctaaaagtgacattcattttaaaa 111  Q
    |||||||| ||||||||||||||| | |||| |||||||||||||   |||| ||| |||||||||||||||    
T  47458470 taattgaatggtacaattgaaaagaaaaaaaatattattgcattgaaactaagagttacattcattttaaaa 47458541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 7906081 - 7906121
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgca 84  Q
    |||||| |||||||||||||||||| ||| |||||||||||    
T  7906081 taattggagggtacaattgaaaagaaaaagttattattgca 7906121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 21864468 - 21864537
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaa 109  Q
    |||||| ||| |||||||||||||| ||| ||||||||||||||    || ||||| |||||||||||||    
T  21864468 taattggaggatacaattgaaaagaaaaagttattattgcattggaaactgaaagtaacattcattttaa 21864537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 21920329 - 21920398
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaa 109  Q
    |||||| ||| |||||||||||||| ||| ||||||||||||||    || ||||| |||||||||||||    
T  21920329 taattggaggatacaattgaaaagaaaaagttattattgcattggaaactgaaagtaacattcattttaa 21920398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 30780218 - 30780281
Alignment:
Q  45 aattgaagggtacaattgaaaagataaaattattattgcattgctaaaagtgacattcattttaaaa 111  Q
    |||||||| ||||||||||||||| ||| |||||||||||   || ||| ||||||| |||||||||    
T  30780218 aattgaagagtacaattgaaaagaaaaagttattattgca---ctgaaaatgacatttattttaaaa 30780281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 9e-19; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 27947568 - 27947649
Alignment:
Q  32 gtagcataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaa 109  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||||    
T  27947568 gtagcataatattaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttaa 27947649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 29531006 - 29531057
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  29531006 cataatattaattgaagggtacaattgaaaagaaaaaattattattgcattg 29531057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 10476208 - 10476134
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaataa 114  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||     | ||||||||||||||||||||||||    
T  10476208 taattgaagggtacaattgaaaagaaaaagttattattgcattggaaagtgaaagtgacattcattttaaaataa 10476134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 24133209 - 24133252
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  24133209 taattgaagggtacaattgaaaagaaaaaattattattgcattg 24133252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 30312535 - 30312459
Alignment:
Q  39 aataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| ||||    |  |||||||||||||||||||||    
T  30312535 aatattaattgaagggtacaattgaaaagaaaaaattattattgtattgaaaaccgaaagtgacattcattttaaaa 30312459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 41137799 - 41137735
Alignment:
Q  45 aattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatt 105  Q
    |||||||||||||||||||||||| ||||||||||||||||||    ||||||||| ||||||||    
T  41137799 aattgaagggtacaattgaaaagaaaaaattattattgcattggaaactaaaagtggcattcatt 41137735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 42285989 - 42285909
Alignment:
Q  35 gcataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||| || ||||||||||||| ||||||||||| ||||||||||||||||||    || ||| |||||||||||||||||    
T  42285989 gcatagtattaattgaagggtataattgaaaagaaaaaattattattgcattggaaactgaaaatgacattcattttaaaa 42285909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 715942 - 716009
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||| |||||||||||||||||| ||||||||||||||||||    || |||||||||||||||||    
T  715942 taattggagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcatttt 716009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 13405206 - 13405277
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||||||||||||||||||||| ||| |||||||| |||||    || |||||||||||||||||||||    
T  13405206 taattgaagggtacaattgaaaagaaaaagttattattacattggaaactgaaagtgacattcattttaaaa 13405277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 19105080 - 19105151
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcatt----gctaaaagtgacattcattttaaaa 111  Q
    ||||||||||||||||||||||||| ||| |||||||||||||     || |||||||||||||||||||||    
T  19105080 taattgaagggtacaattgaaaagaaaaagttattattgcattaaaaactgaaagtgacattcattttaaaa 19105151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 37490856 - 37490789
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||||| |||||||||||||||| ||||||||||||||||||    || |||||||||||||||||    
T  37490856 taattgaaaggtacaattgaaaagaaaaaattattattgcattgaaaactgaaagtgacattcatttt 37490789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 45948709 - 45948776
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  45948709 taattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 45948776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 44453207 - 44453133
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaataa 114  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||    || |||||||||||||||| |||||||    
T  44453207 taattgaagggtacaattgaaaaaagaaagttattattgcattggaaactgaaagtgacattcatttaaaaataa 44453133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 31418592 - 31418635
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    
T  31418592 taattgaagggtacaattgaaaagaaaaagttattattgcattg 31418635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 31929939 - 31929982
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||| |||||||||||||||||| ||||||||||||||||||    
T  31929939 taattggagggtacaattgaaaagaaaaaattattattgcattg 31929982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 1742063 - 1741996
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||    || |||||||||||||||||    
T  1742063 taattgaagggtacaattgaaaagaaaaggttattattgcattggaaactgaaagtgacattcatttt 1741996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 24680200 - 24680129
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||||    || ||| |||||||||||||||||    
T  24680200 taattaaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaaatgacattcattttaaaa 24680129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 40339537 - 40339488
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  40339537 ataatattaattgaagggtacaattgaaaa-ataaagttattattgcattg 40339488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 42880013 - 42880080
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||||||||||||| ||| |||||||| |||||    || |||||||||||||||||    
T  42880013 taattgaagggtacaattgaaaagaaaaagttattattacattgaaaactgaaagtgacattcatttt 42880080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 25440944 - 25440870
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaataa 114  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||    || ||||||||||  ||||||||||||    
T  25440944 taattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacatatattttaaaataa 25440870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 33939806 - 33939884
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    |||||| |||||||| |||||||||| ||||| ||| |||||||| |||||    | ||||||||||||||||||||||    
T  33939806 ataatattaattgaatggtacaattggaaagaaaaagttattattacattggaaaccaaaagtgacattcattttaaaa 33939884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 6563486 - 6563530
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattatt 81  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  6563486 ataatattaattgaagggtacaattgaaaagaaaaagttattatt 6563530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 48843618 - 48843553
Alignment:
Q  50 aagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||| ||||||| ||| ||||||||||||||||||    || |||||||||||||||||||||    
T  48843618 aagggtataattgaagagaaaaaattattattgcattgaaaactgaaagtgacattcattttaaaa 48843553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 33682601 - 33682558
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||    
T  33682601 taattgaagggtaaaattgaaaaggaaaaattattattgcattg 33682558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 37815796 - 37815753
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||| ||||||||||| ||||||||||||| ||||    
T  37815796 taattgaagggtataattgaaaagaaaaaattattattgtattg 37815753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 40753507 - 40753550
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||||| |||||||||||||||| |||||||||||| |||||    
T  40753507 taattgaatggtacaattgaaaagaaaaaattattattacattg 40753550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 48684795 - 48684752
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||||| |||||||||||||||| ||| ||||||||||||||    
T  48684795 taattgaaaggtacaattgaaaagaaaaagttattattgcattg 48684752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 22298064 - 22298001
Alignment:
Q  48 tgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||| ||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  22298064 tgaagggtacagttgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 22298001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 34012233 - 34012162
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||||||||||||||||||| | ||| |||||| | |||||    || |||||||||||||||||||||    
T  34012233 taattgaagggtacaattgaaaaaaaaaagttattagtacattggaaacttaaagtgacattcattttaaaa 34012162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 35777891 - 35777849
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcatt 86  Q
    ||||||||||||||||||||||| | ||| |||||||||||||    
T  35777891 taattgaagggtacaattgaaaataaaaagttattattgcatt 35777849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 41850470 - 41850391
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||||||||||||    ||||||||| ||||||||||||||    
T  41850470 cataatattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactaaaagtgtcattcattttaaaa 41850391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 30431199 - 30431118
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaataa 114  Q
    |||||| |||||||||| |||||||||||||| ||||||||||||||||||    || ||||||||||||||||| ||||||    
T  30431199 ataatattaattgaaggttacaattgaaaagaaaaaattattattgcattgaaaactgaaagtgacattcattttgaaataa 30431118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 33024370 - 33024452
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaataa 114  Q
    ||||||| |||||||| ||| |||||||||||||||| ||||||||||||||    || ||||| ||||||||||||||||||    
T  33024370 cataatattaattgaatggtgcaattgaaaagataaagttattattgcattggaaactgaaagtaacattcattttaaaataa 33024452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 35557828 - 35557879
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||| ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  35557828 catagtaataattgaaaggtacaattgaaaagaaaaaattattattgcattg 35557879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 36729880 - 36729931
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||||||||||||    
T  36729880 cataatattaattgaagggtacaattgaaaagaaaaagttattattgcattg 36729931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 3152884 - 3152951
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  3152884 taattgaagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcatttt 3152951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 45213800 - 45213871
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcatt----gctaaaagtgacattcattttaaaa 111  Q
    ||||||||||||||||||||||||| ||| |||||||||||||     || |||||||||||||||||||||    
T  45213800 taattgaagggtacaattgaaaagaaaaagttattattgcattagaaactgaaagtgacattcattttaaaa 45213871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 50038249 - 50038320
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||||||    
T  50038249 taattggagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttaaaa 50038320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 50088394 - 50088465
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||    ||||||||||| ||||||||||||    
T  50088394 taattgaagggtacaattgaaaagaaaaagttactattgcattggaaactaaaagtgacgttcattttaaaa 50088465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 53200751 - 53200829
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||| |||||||| | |||||||||||||| ||| ||||||||||||||    ||||||||||||||||||||||||    
T  53200751 cataatattaattgaatg-tacaattgaaaagaaaaagttattattgcattgaaaactaaaagtgacattcattttaaaa 53200829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 42072064 - 42071986
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    |||||| ||||||||||||||| ||||||||| ||| ||||||||||||||    |||||| |||||| ||||||||||    
T  42072064 ataatattaattgaagggtacagttgaaaagaaaaagttattattgcattggaaactaaaaatgacatccattttaaaa 42071986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 30934887 - 30934955
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattgctaaaag-tgacattcattttaaaa 111  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||  ||  | |||||||||||||||||    
T  30934887 taattgaggggtacaattgaaaagaaaaaattattattgcattggaaactgatgacattcattttaaaa 30934955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 11393617 - 11393574
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    
T  11393617 taattgaagggtacaattgaaaagaaaaagttattattgcattg 11393574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 27067680 - 27067637
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    
T  27067680 taattgaagggtacaattgaaaagaaaaagttattattgcattg 27067637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 36460886 - 36460835
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||| |||||||||||| |||||||||||| ||| ||||||||||||||    
T  36460886 cataatattaattgaagggtgcaattgaaaagaaaaagttattattgcattg 36460835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 47138032 - 47137964
Alignment:
Q  47 ttgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    |||||||||||||||||||| | ||| ||||||||||||||    |||||| |||||||||||||||||    
T  47138032 ttgaagggtacaattgaaaataaaaagttattattgcattgaaaactaaaaatgacattcattttaaaa 47137964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 33194101 - 33194180
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||| |||||||||||||||||| |||| | ||| |||| |||||||||    || |||||||||||||||||||||    
T  33194101 cataatattaattgaagggtacaattaaaaataaaaagttatcattgcattggaaactgaaagtgacattcattttaaaa 33194180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 36844813 - 36844863
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||| |||||||| | |||||||||||||| ||||||||||||||||||    
T  36844813 ataatattaattgaatgatacaattgaaaagaaaaaattattattgcattg 36844863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 51398082 - 51398015
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||||||||||||| ||| |||||||| |||||    |||||||||||||| |||||    
T  51398082 taattgaagggtacaattgaaaagaaaaagttattattacattgaaaactaaaagtgacatttatttt 51398015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 40487900 - 40487827
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaata 113  Q
    |||||||| |||||||||||||||| ||| ||||||||||||||      |||||||||||||||||| |||||    
T  40487900 taattgaaaggtacaattgaaaagaaaaagttattattgcattggaaatcaaaagtgacattcattttgaaata 40487827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 4759063 - 4759020
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||||| |||||||||||||||| ||| ||||||||||||||    
T  4759063 taattgaaaggtacaattgaaaagaaaaagttattattgcattg 4759020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 11019904 - 11019947
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||||| ||||| |||||||||| ||||||||||||||||||    
T  11019904 taattgaaaggtacgattgaaaagaaaaaattattattgcattg 11019947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 30426402 - 30426445
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||||||||||||||| |||||| ||| ||||||||||||||    
T  30426402 taattgaagggtacaattaaaaagaaaaagttattattgcattg 30426445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 42571607 - 42571650
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||    
T  42571607 taattggagggtacaattgaaaagaaaaagttattattgcattg 42571650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 47895422 - 47895465
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||||    
T  47895422 taattgaagggtataattgaaaagaaaaagttattattgcattg 47895465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 48901792 - 48901749
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||    
T  48901792 taattggagggtacaattgaaaagaaaaagttattattgcattg 48901749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 48903358 - 48903315
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||    
T  48903358 taattggagggtacaattgaaaagaaaaagttattattgcattg 48903315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 38016446 - 38016380
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||||||| |||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  38016446 taattgaagg-tacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 38016380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 39356957 - 39356886
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    |||||||| |||||||||||||||| ||  ||||||||||||||    || ||||||||||| |||||||||    
T  39356957 taattgaaaggtacaattgaaaagaaaatgttattattgcattgaaaactgaaagtgacatttattttaaaa 39356886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 44676293 - 44676226
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||| |||||||||||||||||| ||| |||| |||||||||    || |||||||||||||||||    
T  44676293 taattggagggtacaattgaaaagaaaaagttatcattgcattggaaactgaaagtgacattcatttt 44676226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 4392268 - 4392231
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattatt 81  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  4392268 taattgaagggtacaattgaaaagaaaaagttattatt 4392231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 45566871 - 45566807
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattgctaaaagtgacattcattttaaaa 111  Q
    |||||||| | |||||||||||||| ||| ||||||||| ||||   ||| |||||||||||||||||    
T  45566871 taattgaatgatacaattgaaaagaaaaagttattattgtattg---aaaatgacattcattttaaaa 45566807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 45460744 - 45460692
Alignment:
Q  35 gcataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||||| |||||| |||||||||||||||||| | | ||||||||| ||||    
T  45460744 gcataatattaattggagggtacaattgaaaagaaagagttattattgtattg 45460692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 594 - 668
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaataa 114  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    || ||||||||||||||||||||||||    
T  594 taattgaagggtacaattgtaaagaaaaaattattattgcattggaaactgaaagtgacattcattttaaaataa 668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 5e-17; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 42004971 - 42004889
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaataa 114  Q
    ||||||| ||||||||||||||||||||||| | ||||||||||||||||||     ||||| ||||||||||||||||||||    
T  42004971 cataatattaattgaagggtacaattgaaaataaaaaattattattgcattggaaattaaaaatgacattcattttaaaataa 42004889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 45081973 - 45082055
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaataa 114  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||    || ||||||||||||||| | ||||||    
T  45081973 cataatattaattgaagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattgtgaaataa 45082055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 6220477 - 6220556
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||| |||||||| |||||| ||||||||| ||| ||||||||||||||    ||||||||||||||||||||||||    
T  6220477 cataatattaattgaaaggtacagttgaaaagaaaaagttattattgcattggaaactaaaagtgacattcattttaaaa 6220556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 106
Target Start/End: Original strand, 27964451 - 27964517
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattt 106  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    |||||||||||||||||||    
T  27964451 taattgaagggtacaattgaaaagaaaaagttattattgcattggaaactaaaagtgacattcattt 27964517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 29411775 - 29411697
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    |||||| |||||||||||||||||| |||||| ||  ||||||||||||||    ||||||||||||||||||||||||    
T  29411775 ataatattaattgaagggtacaattaaaaagaaaaggttattattgcattgaaaactaaaagtgacattcattttaaaa 29411697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 16807598 - 16807641
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  16807598 taattgaagggtacaattgaaaagaaaaaattattattgcattg 16807641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 16846879 - 16846922
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  16846879 taattgaagggtacaattgaaaagaaaaaattattattgcattg 16846922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 18579239 - 18579172
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||||||||| |||||||||||| ||||||||||||||||||    || |||||||||||||||||    
T  18579239 taattgaagggtgcaattgaaaagaaaaaattattattgcattgaaaactgaaagtgacattcatttt 18579172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 18719513 - 18719584
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||| ||||    
T  18719513 taattgaagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcatttcaaaa 18719584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 45301837 - 45301766
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||||||    
T  45301837 taattgatgggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttaaaa 45301766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 12566054 - 12566128
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||| |||||||| |||||||||||||| | ||||||||||||||||||    || |||||||||||||||||    
T  12566054 ataatattaattgaatggtacaattgaaaaaaaaaaattattattgcattggaaactgaaagtgacattcatttt 12566128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 441312 - 441355
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    
T  441312 taattgaagggtacaattgaaaagaaaaagttattattgcattg 441355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 4658314 - 4658357
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| |||||||||||| |||||    
T  4658314 taattgaagggtacaattgaaaagaaaaaattattattacattg 4658357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 7874725 - 7874798
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg---ctaaaagtgacattcattttaaaataa 114  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||     |||||||||||| ||||||||||||    
T  7874725 taattgaagggtacgattgaaaagaaaaagttattattgcattggaaacaaaagtgacattaattttaaaataa 7874798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 12342165 - 12342122
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    
T  12342165 taattgaagggtacaattgaaaagaaaaagttattattgcattg 12342122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 16463113 - 16463156
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    
T  16463113 taattgaagggtacaattgaaaagaaaaagttattattgcattg 16463156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 29396753 - 29396804
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||| ||||||||||||| ||||||||||| ||| ||||||||||||||    
T  29396753 cataatattaattgaagggtataattgaaaagaaaaagttattattgcattg 29396804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 34546412 - 34546455
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||||||||||||||| |||||| ||||||||||||||||||    
T  34546412 taattgaagggtacaatttaaaagaaaaaattattattgcattg 34546455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 13562066 - 13562024
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcatt 86  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  13562066 taattgaagggtacaattgaaaagaaaaagttattattgcatt 13562024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 29808892 - 29808813
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||| ||| |||||||||| |||||||||| ||| |||| |||||||||    || |||||||||||||||||||||    
T  29808892 cataatattaagtgaagggtacgattgaaaagaaaaagttatgattgcattgaaaactgaaagtgacattcattttaaaa 29808813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 32228092 - 32228163
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcatt----gctaaaagtgacattcattttaaaa 111  Q
    |||||||||||||||| |||||||| ||| |||||||||||||     | ||||||||||||||||||||||    
T  32228092 taattgaagggtacaactgaaaagaaaaagttattattgcatttaaaaccaaaagtgacattcattttaaaa 32228163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 36685821 - 36685859
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattg 82  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  36685821 taattgaagggtacaattgaaaagaaaaaattattattg 36685859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 38926678 - 38926607
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||||||||||||||||||| |  || ||||||||||||||    || |||||||||||||||||||||    
T  38926678 taattgaagggtacaattgaaaaaaagaagttattattgcattgaaaactgaaagtgacattcattttaaaa 38926607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 43427368 - 43427435
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  43427368 taattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 43427435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 43971576 - 43971509
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  43971576 taattgaagggcacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 43971509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 4469580 - 4469502
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    |||||| ||||| ||||||||||||||||||| ||| ||||||||| ||||    || ||||||| |||||||||||||    
T  4469580 ataatattaatttaagggtacaattgaaaagaaaaagttattattgtattgaaaactgaaagtgaaattcattttaaaa 4469502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 7644718 - 7644649
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaa 109  Q
    ||||||||||||||||||||||||| ||| ||||||||  ||||    || |||||||||||||||||||    
T  7644718 taattgaagggtacaattgaaaagaaaaagttattattatattgaatactgaaagtgacattcattttaa 7644649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 8540139 - 8540070
Alignment:
Q  19 taatattttagaagtagc----ataataataattgaagggtacaattgaaaagataaaattattattgca 84  Q
    |||||||||||||||||     |||||| |||||||||||||||||| |||||| ||| |||||||||||    
T  8540139 taatattttagaagtagtgtaaataatattaattgaagggtacaattaaaaagaaaaagttattattgca 8540070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 4133092 - 4133053
Alignment:
Q  48 tgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  4133092 tgaagggtacaattgaaaagaaaaagttattattgcattg 4133053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 22620415 - 22620458
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||    
T  22620415 taattggagggtacaattgaaaagaaaaagttattattgcattg 22620458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 25383558 - 25383608
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||| |||||||||| |||||||||||||| ||| ||||||||||||||    
T  25383558 cataatattaattgaagg-tacaattgaaaagaaaaagttattattgcattg 25383608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 36178048 - 36178005
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||    
T  36178048 taattgaagggtacaattgaaaaaaaaaagttattattgcattg 36178005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 4288792 - 4288834
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcatt 86  Q
    |||||||| ||| |||||||||||| |||||||||||||||||    
T  4288792 taattgaatggtgcaattgaaaagaaaaaattattattgcatt 4288834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 12393994 - 12394044
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcatt 86  Q
    ||||||| |||||||||||||||||| |||| | ||| |||||||||||||    
T  12393994 cataatattaattgaagggtacaattaaaaataaaaagttattattgcatt 12394044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 111
Target Start/End: Complemental strand, 5717576 - 5717514
Alignment:
Q  53 ggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||||| |||||| ||| ||||||||||||||    || |||||||||||||||||||||    
T  5717576 ggtacaattaaaaagaaaaatttattattgcattggaaactgaaagtgacattcattttaaaa 5717514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 9391632 - 9391681
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcatt 86  Q
    |||||| ||||| ||||  ||||||||||||| |||||||||||||||||    
T  9391632 ataatattaattaaaggtcacaattgaaaagaaaaaattattattgcatt 9391681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 19164436 - 19164387
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcatt 86  Q
    |||||| |||||||||| ||||||| |||||| ||| |||||||||||||    
T  19164436 ataatattaattgaaggatacaattaaaaagaaaaagttattattgcatt 19164387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 35799283 - 35799232
Alignment:
Q  35 gcataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||||| |||||| |||||||||||||||| | ||| ||||||||||||||    
T  35799283 gcataatattaattggagggtacaattgaaaa-aaaaagttattattgcattg 35799232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 4220 - 4170
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  4220 ataatattaattgaagggtacaattgaaaagaaaaaattattattgcattg 4170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 9304714 - 9304781
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    |||||||| |||||||||||    
T  9304714 taattgaagggtacaattgaaaagaaaaaattattattgcattggaaactaaaagtcacattcatttt 9304781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 5295480 - 5295529
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcatt 86  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  5295480 ataatattaattgaagggtacaattgaaaagaaaaaattattattgcatt 5295529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 43084708 - 43084782
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaataa 114  Q
    |||||||| |||||||||||||||| ||| ||||||||||||||    || ||||||||||||||||||||||||    
T  43084708 taattgaaaggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttaaaataa 43084782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 514946 - 514873
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaata 113  Q
    |||||||||| |||||||||||||| ||||||||||||||||||     | |||||||||||||||||||||||    
T  514946 taattgaaggatacaattgaaaagaaaaaattattattgcattgaaaattgaaagtgacattcattttaaaata 514873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 4989558 - 4989507
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||||||||||||    
T  4989558 cataatattaattgaagggtacaattgaaaagaaaaagttattattgcattg 4989507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 31899321 - 31899372
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||    
T  31899321 cataatattaattgaagagtacaattgaaaagaaaaaattattattgcattg 31899372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 4760639 - 4760710
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||     | |||||||||||||||||||||    
T  4760639 taattgaagggtacaattgaaaagaaaaaattattgttgcattggaaaatgaaagtgacattcattttaaaa 4760710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 17921036 - 17920957
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||| ||||||||| ||||||||| ||||| ||| ||||||||||||||    || |||||||||||||||||||||    
T  17921036 cataatattaattgaagagtacaattgtaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttaaaa 17920957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 31693694 - 31693773
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||| |||||||| |||||||||||||||| ||| ||||||||||||||    || ||||||| |||||||||||||    
T  31693694 cataatattaattgaaaggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgatattcattttaaaa 31693773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 39463331 - 39463264
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  39463331 taattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 39463264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 39698747 - 39698814
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  39698747 taattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 39698814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 35356387 - 35356336
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||| ||||||||||||| ||||||||||| ||| ||||||||||||||    
T  35356387 cataatattaattgaagggtataattgaaaagaaaaagttattattgcattg 35356336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 15160527 - 15160594
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  15160527 taattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 15160594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 34796759 - 34796801
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcatt 86  Q
    |||||||||||| |||||||||||| |||||||||||||||||    
T  34796759 taattgaagggttcaattgaaaagaaaaaattattattgcatt 34796801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 40228654 - 40228579
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||| ||||||||  ||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  40228654 cataatattaattgaaatgtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcatttt 40228579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 40362507 - 40362436
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    |||||| |||||| ||||||||||| ||| ||||||||||||||    || |||||||||||||||||||||    
T  40362507 taattggagggtaaaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttaaaa 40362436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 6374492 - 6374419
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||| |||||||||| |||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  6374492 ataatattaattgaagg-tacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcatttt 6374419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 34156607 - 34156533
Alignment:
Q  44 taattgaagggtacaattgaaaag-ataaaattattattgcattgctaa----aagtgacattcattttaaaata 113  Q
    |||||||||||||||||||||||| | ||||||||||||||||||  ||    |||||| |||||||||||||||    
T  34156607 taattgaagggtacaattgaaaagaaaaaaattattattgcattggaaaccgtaagtgatattcattttaaaata 34156533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 19574459 - 19574415
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattgc 88  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||||    
T  19574459 taattgaagggtacaattgaaaagaaaaagttattattacattgc 19574415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 9880582 - 9880625
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||| | ||||||||||| ||||||||||||||||||    
T  9880582 taattgaagggcataattgaaaagaaaaaattattattgcattg 9880625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 19438308 - 19438265
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| ||| |||||||| |||||    
T  19438308 taattgaagggtacaattgaaaagaaaaagttattattacattg 19438265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 29025827 - 29025870
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||||    
T  29025827 taattgaagggtagaattgaaaagaaaaagttattattgcattg 29025870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 36921429 - 36921386
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||| | |||||||||||||||| ||||||||||||||||||    
T  36921429 taattggaaggtacaattgaaaagaaaaaattattattgcattg 36921386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 40400066 - 40400126
Alignment:
Q  53 ggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaa 109  Q
    |||||||||||||||| ||||||||| ||||||||    |||||||| |||||||||||||    
T  40400066 ggtacaattgaaaagaaaaaattattgttgcattggaaactaaaagtcacattcattttaa 40400126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 43448788 - 43448745
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||    
T  43448788 taattgaagggtacaattgaaaaaaaaaagttattattgcattg 43448745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 37559614 - 37559685
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    |||||| |||||||||||||||||| ||| ||||||||| ||||    || ||||||||||| |||||||||    
T  37559614 taattggagggtacaattgaaaagaaaaagttattattgtattggaaactgaaagtgacattgattttaaaa 37559685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 43974886 - 43974945
Alignment:
Q  58 aattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaata 113  Q
    ||||||||||| ||| ||||||||||||||    |||||||||||||||||||| |||||    
T  43974886 aattgaaaagaaaaagttattattgcattggaaactaaaagtgacattcattttgaaata 43974945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 45358968 - 45359018
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||| ||||||||   |||||||||||||| ||||||||||||||||||    
T  45358968 ataatattaattgaaaaatacaattgaaaagaaaaaattattattgcattg 45359018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 44713611 - 44713563
Alignment:
Q  39 aataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||| ||||||||||||| ||||||||| | ||| ||||||||||||||    
T  44713611 aatattaattgaagggtataattgaaaaaaaaaagttattattgcattg 44713563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 234106 - 234039
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    ||||||||||||||||||||    
T  234106 taattgaagggtacaattgaaaagaaaaagttattattgcattggaaactaaaagtgacattcatttt 234039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 32193774 - 32193703
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcatt----gctaaaagtgacattcattttaaaa 111  Q
    ||||||||||||||||||||||||| |||||||||||||||||     |||||||||||||| |||||||||    
T  32193774 taattgaagggtacaattgaaaagaaaaaattattattgcattagaaactaaaagtgacatttattttaaaa 32193703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 24163795 - 24163866
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||||  ||||||||||||||| ||||||||||||||||||    || |||||||||||||||||||||    
T  24163795 taattgaaatgtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattttaaaa 24163866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 29400018 - 29399951
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||| |||||||||||||||||| ||||||||||||||||||    || |||||||||||||||||    
T  29400018 taattggagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcatttt 29399951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 31233707 - 31233777
Alignment:
Q  45 aattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    |||||||||||||||||||||||| || |||||||||||| ||    || |||||||||||||||||||||    
T  31233707 aattgaagggtacaattgaaaagaaaatattattattgcaatgaaaactgaaagtgacattcattttaaaa 31233777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 12063592 - 12063657
Alignment:
Q  45 aattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattt 106  Q
    |||||||||||||||||||||| | ||||||||||||||||||    || ||||||||||||||||    
T  12063592 aattgaagggtacaattgaaaaaaaaaaattattattgcattggaaactgaaagtgacattcattt 12063657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 3988824 - 3988867
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||    
T  3988824 taattgaagggtataattgaaaagaaaaaattattattgcattg 3988867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 10520720 - 10520763
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||    
T  10520720 taattgaagggtacaattgaaaagaaaaaattattattgtattg 10520763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 29713487 - 29713530
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    
T  29713487 taattgaagggtacaattgaaaagaaaaagttattattgcattg 29713530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 577140 - 577090
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||| ||||||||||||| |||||||| |||||| ||||||||||||||    
T  577140 ataatattaattgaagggtataattgaaatgataaagttattattgcattg 577090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 17267681 - 17267731
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||| ||||| ||||||||| ||||||||| ||||||||||||||||||    
T  17267681 ataatattaattaaagggtacagttgaaaagaaaaaattattattgcattg 17267731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 8030714 - 8030640
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaataa 114  Q
    ||||||||||||||| ||||||||| |||||||||||| |||||    || ||||| ||||||||||| ||||||    
T  8030714 taattgaagggtacagttgaaaagaaaaaattattattacattgaaaactgaaagtaacattcattttgaaataa 8030640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 9940727 - 9940649
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    |||||| |||||||||||||||||||||||   ||| ||||||||||||||    || ||||||||| |||||||||||    
T  9940727 ataatattaattgaagggtacaattgaaaaagaaaagttattattgcattgaaaactgaaagtgacaatcattttaaaa 9940649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 18737164 - 18737242
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    |||||| ||||| ||||||| ||||||||||| | | ||||||||||||||    || |||||||||||||||||||||    
T  18737164 ataatattaattaaagggtataattgaaaagaaagagttattattgcattggaaactgaaagtgacattcattttaaaa 18737242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 24556009 - 24556083
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaataa 114  Q
    ||||||||| ||||||||||||||| |||||||||||| |||||    || ||| ||||||| ||||||||||||    
T  24556009 taattgaagagtacaattgaaaagaaaaaattattattacattgaaaactgaaaatgacatttattttaaaataa 24556083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 19675052 - 19675009
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||||| |||||||||||||||| ||| ||||||||||||||    
T  19675052 taattgaatggtacaattgaaaagaaaaagttattattgcattg 19675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 34513684 - 34513727
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||||||| |||||||||||||| ||| ||||||||||||||    
T  34513684 taattgaaggatacaattgaaaagaaaaagttattattgcattg 34513727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 1134997 - 1134959
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattg 82  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  1134997 taattgaagggtacaattgaaaagaaaaagttattattg 1134959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 12591161 - 12591232
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||    ||||||||||||||||||||||||    
T  12591161 taattggagggtacaattgaaaagaaaaagttattattgcattggaaactaaaagtgacattcattttaaaa 12591232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 15823106 - 15823035
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||||||    
T  15823106 taattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttaaaa 15823035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 25487160 - 25487087
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaata 113  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||||||||    
T  25487160 taattggagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttaaaata 25487087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 44258588 - 44258657
Alignment:
Q  46 attgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    |||| |||||||||||||||||| ||||||||||||||||||    || |||||||||||||||||||||    
T  44258588 attggagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattttaaaa 44258657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 9915515 - 9915444
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    || ||| |||||||||||||||||    
T  9915515 taattgaagggtacaattgaaaagaaaaatttattattgcattggaaactgaaaatgacattcattttaaaa 9915444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 26352160 - 26352227
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||    ||||||||||||||||||||    
T  26352160 taattggagggtacaattgaaaagaaaaagttattattgcattgaaaactaaaagtgacattcatttt 26352227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 26595148 - 26595219
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    |||||||| |||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||||||    
T  26595148 taattgaatggtacaattgaaaagaaaaatttattattgcattgtaaactgaaagtgacattcattttaaaa 26595219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 29567968 - 29567901
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  29567968 taattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 29567901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 34110606 - 34110556
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| |||||| ||| ||||||||||||||    
T  34110606 ataataataattgaagggtacaattaaaaagaaaaagttattattgcattg 34110556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 40717375 - 40717442
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||    || |||||||||||||||||    
T  40717375 taattgaagggtacagttgaaaagaaaaaattattattgcattgaaaactgaaagtgacattcatttt 40717442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 50094301 - 50094234
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  50094301 taattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 50094234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 43759404 - 43759363
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcat 85  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  43759404 taattgaagggtacaattgaaaagaaaaaattattattgcat 43759363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 32807020 - 32807084
Alignment:
Q  47 ttgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  32807020 ttgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 32807084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 52125207 - 52125258
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||| |||||||||||||||||||| || | ||||||||||||||||||    
T  52125207 cataatattaattgaagggtacaattgagaataaaaaattattattgcattg 52125258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 14593406 - 14593465
Alignment:
Q  51 agggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattt 106  Q
    |||||||||||||||||| ||||||||||||||||||    || ||||||||||||||||    
T  14593406 agggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattt 14593465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 24611599 - 24611666
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcatt----gctaaaagtgacattcatttt 107  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||     ||||||||||||||||||||    
T  24611599 taattgaagggtacaattgaaaagaaaaagttattattacattagaaactaaaagtgacattcatttt 24611666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 34032159 - 34032226
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||| | |||||||||||||||| ||||||||||||||||||    || |||||||||||||||||    
T  34032159 taattggacggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcatttt 34032226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 34047314 - 34047381
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  34047314 taattggagggtacaattgaaaagaaaaagttattattgcattggaaactcaaagtgacattcatttt 34047381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 44108671 - 44108600
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||    || ||||||||||| |||||||||    
T  44108671 taattgaagggtacaattgaaaagaaaaagttattattgtattggaaactgaaagtgacatttattttaaaa 44108600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 44557123 - 44557194
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    |||||||| |||||||||||||||| ||  ||||||||||||||    || |||||||||||||||||||||    
T  44557123 taattgaatggtacaattgaaaagaaaatgttattattgcattggagactgaaagtgacattcattttaaaa 44557194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 50249382 - 50249315
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  50249382 taattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 50249315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 52066361 - 52066410
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||| ||||||||||||||||||||||||| |||||||||| |||||||    
T  52066361 ataatattaattgaagggtacaattgaaaaga-aaaattattactgcattg 52066410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 10842852 - 10842778
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaataa 114  Q
    ||||||||| ||||||||||||||| ||  ||||||||||||||    || ||||||||||||||||| ||||||    
T  10842852 taattgaagagtacaattgaaaagaaaatgttattattgcattgaaaactgaaagtgacattcattttgaaataa 10842778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 15573691 - 15573612
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaa----ttattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||| ||||||||||||||||||||||||| ||||    ||||||||||||||    || |||||||||||||||||    
T  15573691 cataatattaattgaagggtacaattgaaaagaaaaaaaaagttattattgcattgaaaactgaaagtgacattcatttt 15573612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 31699368 - 31699405
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattatt 81  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  31699368 taattgaagggtacaattgaaaagaaaaaattattatt 31699405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 33622436 - 33622518
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattgcta----aaagtgacattcattttaaaataa 114  Q
    ||||||| ||| | ||| ||||||||||||||||||| ||||||||||||||  |    ||| ||||||||||||||||||||    
T  33622436 cataatattaactaaagagtacaattgaaaagataaagttattattgcattgaaaatcgaaaatgacattcattttaaaataa 33622518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 25151888 - 25151844
Alignment:
Q  43 ataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||    
T  25151888 ataattgaagggtacaattgaaaagaaaatgttattattgcattg 25151844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 16757273 - 16757316
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||||||||||||||||||||||  || ||||||||||||||    
T  16757273 taattgaagggtacaattgaaaagaataagttattattgcattg 16757316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 25560951 - 25560994
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||    
T  25560951 taattgaaaggtataattgaaaagaaaaaattattattgcattg 25560994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 35848012 - 35848055
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||||| |||||||||||||||| ||| ||||||||||||||    
T  35848012 taattgaaaggtacaattgaaaagaaaaagttattattgcattg 35848055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 46286897 - 46286940
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||||||||| |||||||||||| ||| ||||||||||||||    
T  46286897 taattgaagggtgcaattgaaaagaaaaagttattattgcattg 46286940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 48025333 - 48025376
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||||||||||||||||||| || ||| ||||||||||||||    
T  48025333 taattgaagggtacaattgaaacgaaaaagttattattgcattg 48025376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 49426494 - 49426537
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||    
T  49426494 taattgacgggtacagttgaaaagaaaaaattattattgcattg 49426537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 49468790 - 49468833
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||    
T  49468790 taattgaagggtacaattgaaaagaaaatgttattattgcattg 49468833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 52024313 - 52024356
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||    
T  52024313 taattggagggtacaattgaaaagaaaaatttattattgcattg 52024356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 1740720 - 1740791
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    |||||||| |||||||||||||| | ||| |||||||| |||||    || |||||||||||||||||||||    
T  1740720 taattgaatggtacaattgaaaataaaaagttattatttcattggaaactgaaagtgacattcattttaaaa 1740791  T

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Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 27209068 - 27209018
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||| |||||||| |||||||||||||| | ||| ||||||||||||||    
T  27209068 ataatattaattgaatggtacaattgaaaataaaaagttattattgcattg 27209018  T

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Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 38531377 - 38531419
Alignment:
Q  45 aattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||||||||| | ||||||||||| ||||||||||||||||||    
T  38531377 aattgaagggcataattgaaaagaaaaaattattattgcattg 38531419  T

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Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 46554870 - 46554799
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||||||||||||||||||| | ||| ||||||||||| ||    || || ||||||||||||||||||    
T  46554870 taattgaagggtacaattgaaaataaaaagttattattgcagtggaaactgaaggtgacattcattttaaaa 46554799  T

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Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 48009082 - 48009040
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcatt 86  Q
    |||||||| |||||||||||||||| ||| |||||||||||||    
T  48009082 taattgaacggtacaattgaaaagaaaaagttattattgcatt 48009040  T

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Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 52706953 - 52706911
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcatt 86  Q
    |||||||||||||||||| |||||| |||||||||||| ||||    
T  52706953 taattgaagggtacaattaaaaagaaaaaattattattacatt 52706911  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 87
Target Start/End: Original strand, 13408350 - 13408387
Alignment:
Q  50 aagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  13408350 aagggtacaattgaaaagaaaaagttattattgcattg 13408387  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 18794614 - 18794663
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcatt 86  Q
    |||||| |||||||||||| ||| |||||||| ||| |||||||||||||    
T  18794614 ataatattaattgaagggtgcaactgaaaagaaaaagttattattgcatt 18794663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 2610904 - 2610952
Alignment:
Q  39 aataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||| |||||||| | |||||||||||||| ||||||||||||| ||||    
T  2610904 aatattaattgaatgttacaattgaaaagaaaaaattattattgtattg 2610952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 7214115 - 7214183
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattgctaa-aagtgacattcattttaaaa 111  Q
    ||||||||| ||| |||| |||||| ||| ||||||||||||||  || |||||||||| |||||||||    
T  7214115 taattgaagcgtataattaaaaagaaaaatttattattgcattgaaaacaagtgacatttattttaaaa 7214183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 49402945 - 49402993
Alignment:
Q  39 aataataattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    |||| |||||| || ||||||||||||||| ||| ||||||||||||||    
T  49402945 aatattaattggagagtacaattgaaaagaaaaagttattattgcattg 49402993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 21162 - 21236
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcatt----gctaaaagtgacattcattttaaaataa 114  Q
    ||||||||||||||||||||||||| |||||||||||||||||     || ||||||||| ||||||||||||||    
T  21162 taattgaagggtacaattgaaaagaaaaaattattattgcatttgaaactgaaagtgacagtcattttaaaataa 21236  T

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Target: scaffold0136 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 9516 - 9453
Alignment:
Q  45 aattgaagggtacaattgaaaagataaaattattattgcattgctaaaagtgacattcattttaaaa 111  Q
    |||| ||||||||||||||||||| ||||||||||||||||||   ||| |||||||||||||||||    
T  9516 aattaaagggtacaattgaaaagaaaaaattattattgcattg---aaaatgacattcattttaaaa 9453  T

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Target: scaffold0502 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 645 - 725
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcattgctaa----aagtgacattcattttaaaata 113  Q
    |||||| |||||||||||||||||| |||||| ||| ||||||||||||||  ||    ||||||||||||||||||||||    
T  645 ataatattaattgaagggtacaattaaaaagaaaaagttattattgcattggaaattgtaagtgacattcattttaaaata 725  T

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Target: scaffold0565 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 9722 - 9793
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcattttaaaa 111  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    || ||| |||||||||||||||||    
T  9722 taattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaaatgacattcattttaaaa 9793  T

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Target: scaffold0110 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 24821 - 24888
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  24821 taattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 24888  T

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Target: scaffold0300 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 4644 - 4563
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattattgcatt----gctaaaagtgacattcattttaaaataa 114  Q
    |||||| | |||||| |||||||||||||||| |||||||||||||||||      ||||||||||||||||||| ||||||    
T  4644 ataatattgattgaaaggtacaattgaaaagaaaaaattattattgcattaaaaattaaaagtgacattcattttgaaataa 4563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 18335 - 18378
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg 87  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    
T  18335 taattgaagggtacaattgaaaagaaaaagttattattgcattg 18378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 3891 - 3958
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||    || |||||||||||||||||    
T  3891 taattggagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcatttt 3958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 3585 - 3652
Alignment:
Q  44 taattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||    || |||||||||||||||||    
T  3585 taattgaagggtacaattgaaaagaaaaagttattattgtattggaaactgaaagtgacattcatttt 3652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 760 - 804
Alignment:
Q  37 ataataataattgaagggtacaattgaaaagataaaattattatt 81  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||    
T  760 ataatattaattaaagggtacaattgaaaagaaaaaattattatt 804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 1486 - 1536
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcatt 86  Q
    ||||||| ||| ||||||||||||||||||||| ||| |||| ||||||||    
T  1486 cataatattaaatgaagggtacaattgaaaagaaaaagttatcattgcatt 1536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 62713 - 62638
Alignment:
Q  36 cataataataattgaagggtacaattgaaaagataaaattattattgcattg----ctaaaagtgacattcatttt 107  Q
    ||||||| |||||||||||||||||| |||||| ||| |||||||| ||| |    || |||||||||||||||||    
T  62713 cataatattaattgaagggtacaattaaaaagaaaaagttattattacataggaaactgaaagtgacattcatttt 62638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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