View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1947_low_3 (Length: 246)

Name: NF1947_low_3
Description: NF1947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1947_low_3
NF1947_low_3
[»] chr7 (42 HSPs)
chr7 (1-239)||(22073183-22073419)
chr7 (1-212)||(16219358-16219570)
chr7 (10-163)||(16056604-16056757)
chr7 (32-239)||(12255409-12255614)
chr7 (32-216)||(2279756-2279941)
chr7 (14-212)||(47832088-47832287)
chr7 (1-212)||(16324273-16324485)
chr7 (10-203)||(9389346-9389541)
chr7 (1-192)||(44014440-44014633)
chr7 (1-185)||(68012-68198)
chr7 (46-194)||(21064822-21064971)
chr7 (48-193)||(810790-810936)
chr7 (36-193)||(12756378-12756535)
chr7 (50-193)||(18005963-18006101)
chr7 (48-200)||(15143691-15143844)
chr7 (33-163)||(44116804-44116933)
chr7 (32-193)||(17061621-17061783)
chr7 (42-193)||(38227788-38227940)
chr7 (99-216)||(2529615-2529733)
chr7 (123-200)||(28504955-28505033)
chr7 (97-190)||(14045187-14045281)
chr7 (97-190)||(14355217-14355311)
chr7 (41-193)||(9509495-9509649)
chr7 (119-200)||(16385912-16385994)
chr7 (119-200)||(40443762-40443844)
chr7 (120-200)||(15754541-15754622)
chr7 (97-180)||(12901768-12901852)
chr7 (97-190)||(14036637-14036731)
chr7 (97-190)||(14346667-14346761)
chr7 (98-190)||(1867650-1867743)
chr7 (119-200)||(27847498-27847580)
chr7 (120-192)||(3564026-3564099)
chr7 (41-90)||(26212302-26212351)
chr7 (49-141)||(35366540-35366631)
chr7 (49-88)||(9177431-9177470)
chr7 (120-193)||(12699218-12699292)
chr7 (39-89)||(15008263-15008313)
chr7 (14-87)||(12901609-12901682)
chr7 (100-180)||(15008118-15008199)
chr7 (41-90)||(40443695-40443744)
chr7 (145-200)||(11995712-11995768)
chr7 (100-205)||(17017040-17017146)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-239)||(32803-33039)
scaffold0034 (120-193)||(51545-51619)
[»] scaffold0556 (2 HSPs)
scaffold0556 (20-239)||(8302-8519)
scaffold0556 (1-193)||(7077-7271)
[»] chr6 (38 HSPs)
chr6 (10-239)||(23019683-23019910)
chr6 (19-212)||(25644607-25644801)
chr6 (1-212)||(27332926-27333138)
chr6 (1-212)||(27393666-27393878)
chr6 (49-200)||(22080391-22080543)
chr6 (52-203)||(25956272-25956424)
chr6 (1-193)||(4667874-4668067)
chr6 (1-193)||(4674721-4674914)
chr6 (1-185)||(19652461-19652647)
chr6 (5-193)||(4185484-4185673)
chr6 (1-193)||(4189223-4189416)
chr6 (33-193)||(18457014-18457174)
chr6 (48-193)||(29808544-29808691)
chr6 (98-216)||(9098087-9098206)
chr6 (48-193)||(28496134-28496280)
chr6 (119-193)||(20360632-20360707)
chr6 (41-193)||(29060847-29061000)
chr6 (41-193)||(19303202-19303355)
chr6 (119-200)||(20637948-20638030)
chr6 (120-200)||(1561689-1561770)
chr6 (97-216)||(20109578-20109698)
chr6 (14-89)||(19668653-19668728)
chr6 (41-160)||(25629050-25629169)
chr6 (119-200)||(18821484-18821566)
chr6 (120-193)||(22779888-22779962)
chr6 (1-90)||(31155163-31155252)
chr6 (119-200)||(16920298-16920380)
chr6 (49-87)||(17106048-17106086)
chr6 (120-193)||(18409488-18409562)
chr6 (41-90)||(11185808-11185857)
chr6 (41-90)||(16920399-16920448)
chr6 (54-87)||(18177438-18177471)
chr6 (54-87)||(18204400-18204433)
chr6 (49-90)||(18821585-18821626)
chr6 (41-90)||(20360726-20360775)
chr6 (49-161)||(16830111-16830223)
chr6 (99-163)||(19023814-19023878)
chr6 (98-203)||(19668812-19668918)
[»] scaffold0078 (1 HSPs)
scaffold0078 (10-216)||(10804-11011)
[»] chr5 (29 HSPs)
chr5 (14-239)||(26011652-26011875)
chr5 (32-239)||(22144348-22144553)
chr5 (1-212)||(21329137-21329350)
chr5 (1-216)||(5888813-5889030)
chr5 (1-216)||(21741181-21741398)
chr5 (4-193)||(22959194-22959385)
chr5 (32-193)||(21565842-21566004)
chr5 (1-92)||(21501917-21502007)
chr5 (87-212)||(21498659-21498785)
chr5 (32-193)||(11580906-11581068)
chr5 (32-200)||(1096765-1096934)
chr5 (1-200)||(21871225-21871425)
chr5 (1-200)||(21875505-21875705)
chr5 (41-193)||(21985808-21985961)
chr5 (32-203)||(36154479-36154651)
chr5 (43-193)||(23390157-23390309)
chr5 (1-193)||(19669165-19669360)
chr5 (99-216)||(20026501-20026619)
chr5 (97-205)||(22177792-22177901)
chr5 (119-200)||(21292635-21292717)
chr5 (41-193)||(24529527-24529681)
chr5 (120-200)||(19660491-19660572)
chr5 (120-183)||(9078338-9078402)
chr5 (49-87)||(25744036-25744074)
chr5 (41-90)||(9078259-9078308)
chr5 (41-90)||(21292736-21292785)
chr5 (41-90)||(22075325-22075374)
chr5 (120-200)||(22119847-22119928)
chr5 (40-88)||(20469654-20469702)
[»] scaffold0507 (1 HSPs)
scaffold0507 (1-216)||(7695-7911)
[»] chr3 (48 HSPs)
chr3 (36-216)||(2050839-2051018)
chr3 (32-239)||(52523345-52523550)
chr3 (14-204)||(324515-324706)
chr3 (14-212)||(14234770-14234969)
chr3 (1-200)||(15471191-15471391)
chr3 (16-216)||(1465047-1465249)
chr3 (32-193)||(17247947-17248109)
chr3 (33-216)||(42386710-42386894)
chr3 (33-193)||(53070360-53070520)
chr3 (48-193)||(12933971-12934117)
chr3 (1-185)||(16097596-16097782)
chr3 (48-193)||(32307983-32308128)
chr3 (97-204)||(605941-606049)
chr3 (41-183)||(40213392-40213535)
chr3 (16-89)||(37250932-37251005)
chr3 (48-183)||(49667754-49667890)
chr3 (53-193)||(9513228-9513370)
chr3 (53-193)||(9521203-9521345)
chr3 (1-90)||(12171869-12171959)
chr3 (19-182)||(14572873-14573037)
chr3 (99-205)||(23275106-23275213)
chr3 (99-213)||(23412814-23412929)
chr3 (41-193)||(25476046-25476199)
chr3 (97-205)||(43927543-43927652)
chr3 (121-193)||(49389305-49389378)
chr3 (48-185)||(1644352-1644489)
chr3 (99-211)||(14501564-14501677)
chr3 (49-193)||(11424424-11424569)
chr3 (120-200)||(14179708-14179789)
chr3 (97-194)||(12378359-12378457)
chr3 (99-211)||(45797608-45797721)
chr3 (120-193)||(18438920-18438994)
chr3 (119-200)||(20698101-20698183)
chr3 (41-193)||(26687193-26687347)
chr3 (41-193)||(14973161-14973314)
chr3 (98-163)||(37250804-37250869)
chr3 (122-193)||(16104168-16104240)
chr3 (120-182)||(14576505-14576568)
chr3 (120-182)||(17488243-17488306)
chr3 (120-182)||(17499725-17499788)
chr3 (97-203)||(22109926-22110033)
chr3 (49-87)||(606135-606173)
chr3 (120-200)||(12340138-12340219)
chr3 (49-86)||(13210096-13210133)
chr3 (41-90)||(20698202-20698251)
chr3 (120-183)||(13442660-13442724)
chr3 (49-89)||(22110116-22110156)
chr3 (41-85)||(23083132-23083176)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-212)||(6879-7092)
scaffold0333 (1-212)||(14259-14472)
[»] scaffold0138 (1 HSPs)
scaffold0138 (14-200)||(13220-13407)
[»] chr4 (36 HSPs)
chr4 (1-216)||(15099616-15099833)
chr4 (1-212)||(39705930-39706142)
chr4 (1-203)||(15190583-15190787)
chr4 (32-239)||(52242811-52243016)
chr4 (32-216)||(15464567-15464752)
chr4 (63-216)||(43198226-43198380)
chr4 (49-203)||(13844854-13845009)
chr4 (1-192)||(8846640-8846834)
chr4 (32-185)||(44928592-44928746)
chr4 (99-216)||(15868273-15868391)
chr4 (48-193)||(12774313-12774458)
chr4 (33-193)||(21814964-21815124)
chr4 (33-193)||(21815293-21815453)
chr4 (33-193)||(21818386-21818546)
chr4 (99-211)||(32851816-32851929)
chr4 (97-212)||(13415-13532)
chr4 (120-194)||(16597031-16597106)
chr4 (119-194)||(3097017-3097093)
chr4 (41-163)||(15091203-15091326)
chr4 (97-163)||(12287825-12287891)
chr4 (41-193)||(14038955-14039109)
chr4 (32-90)||(44102508-44102566)
chr4 (98-163)||(53081789-53081854)
chr4 (48-88)||(13616-13656)
chr4 (119-182)||(12903131-12903195)
chr4 (119-200)||(14052967-14053049)
chr4 (43-90)||(7089185-7089232)
chr4 (120-193)||(16239653-16239728)
chr4 (43-90)||(17047838-17047885)
chr4 (120-193)||(6190819-6190893)
chr4 (119-180)||(7089251-7089313)
chr4 (41-90)||(3096949-3096998)
chr4 (41-90)||(7799003-7799052)
chr4 (41-90)||(12903063-12903112)
chr4 (120-200)||(15552199-15552280)
chr4 (120-200)||(24029127-24029208)
[»] scaffold0116 (2 HSPs)
scaffold0116 (49-200)||(43438-43590)
scaffold0116 (49-200)||(47358-47510)
[»] scaffold0020 (1 HSPs)
scaffold0020 (32-203)||(15481-15653)
[»] chr8 (38 HSPs)
chr8 (10-216)||(39834107-39834315)
chr8 (10-212)||(6520644-6520847)
chr8 (16-212)||(38854893-38855090)
chr8 (10-125)||(21285874-21285989)
chr8 (1-185)||(21673971-21674157)
chr8 (48-180)||(19801101-19801234)
chr8 (1-185)||(23760509-23760694)
chr8 (32-193)||(41598482-41598644)
chr8 (1-185)||(26355367-26355553)
chr8 (99-206)||(13507657-13507765)
chr8 (99-206)||(13597189-13597297)
chr8 (98-216)||(20499024-20499143)
chr8 (41-163)||(22875372-22875494)
chr8 (41-200)||(20536514-20536675)
chr8 (124-203)||(21491382-21491462)
chr8 (19-193)||(23406665-23406841)
chr8 (123-200)||(5865931-5866009)
chr8 (41-193)||(6759563-6759717)
chr8 (123-200)||(17141302-17141380)
chr8 (119-194)||(45130691-45130767)
chr8 (97-205)||(17266565-17266674)
chr8 (120-193)||(18878898-18878972)
chr8 (97-205)||(982975-983084)
chr8 (97-183)||(17439100-17439187)
chr8 (168-239)||(21286656-21286724)
chr8 (120-200)||(21918664-21918745)
chr8 (97-183)||(24353463-24353550)
chr8 (33-194)||(21414887-21415049)
chr8 (120-193)||(7373135-7373209)
chr8 (120-193)||(18818071-18818145)
chr8 (48-90)||(21918766-21918808)
chr8 (124-193)||(22627125-22627195)
chr8 (119-200)||(31971629-31971711)
chr8 (41-90)||(18818175-18818224)
chr8 (120-200)||(21255605-21255686)
chr8 (97-183)||(37116787-37116874)
chr8 (119-163)||(25362843-25362887)
chr8 (49-89)||(37116664-37116704)
[»] chr2 (25 HSPs)
chr2 (32-216)||(23708257-23708441)
chr2 (32-200)||(25176140-25176309)
chr2 (19-203)||(23076726-23076910)
chr2 (19-193)||(23660307-23660482)
chr2 (41-193)||(298476-298629)
chr2 (14-89)||(23207559-23207634)
chr2 (52-183)||(28406297-28406429)
chr2 (123-200)||(23071617-23071695)
chr2 (97-216)||(18786446-18786566)
chr2 (41-163)||(22337422-22337544)
chr2 (124-193)||(22133878-22133948)
chr2 (97-180)||(22412733-22412817)
chr2 (120-193)||(22730894-22730968)
chr2 (124-193)||(22737841-22737911)
chr2 (119-200)||(23654064-23654146)
chr2 (36-89)||(22412900-22412953)
chr2 (97-180)||(23207717-23207801)
chr2 (119-200)||(23286235-23286317)
chr2 (120-193)||(27753961-27754035)
chr2 (41-193)||(32451590-32451744)
chr2 (119-194)||(37787-37863)
chr2 (32-89)||(20519957-20520014)
chr2 (119-163)||(20309479-20309523)
chr2 (97-180)||(20519790-20519874)
chr2 (49-85)||(31756232-31756268)
[»] scaffold0010 (3 HSPs)
scaffold0010 (1-185)||(130173-130359)
scaffold0010 (32-89)||(60479-60536)
scaffold0010 (97-180)||(60312-60396)
[»] scaffold0810 (1 HSPs)
scaffold0810 (1-193)||(3198-3392)
[»] chr1 (39 HSPs)
chr1 (1-216)||(28194086-28194303)
chr1 (1-200)||(22921521-22921722)
chr1 (1-193)||(52927642-52927835)
chr1 (10-193)||(33681284-33681469)
chr1 (1-216)||(35981325-35981541)
chr1 (1-163)||(20637116-20637279)
chr1 (86-203)||(43697712-43697830)
chr1 (1-190)||(20248543-20248734)
chr1 (10-193)||(22237905-22238089)
chr1 (39-193)||(433312-433467)
chr1 (48-193)||(21754350-21754495)
chr1 (41-182)||(50209885-50210027)
chr1 (99-216)||(21861132-21861250)
chr1 (32-89)||(26065238-26065295)
chr1 (41-192)||(34510087-34510239)
chr1 (99-216)||(21895870-21895989)
chr1 (99-216)||(16759091-16759209)
chr1 (119-200)||(22355839-22355921)
chr1 (119-200)||(22357525-22357607)
chr1 (99-216)||(21342513-21342631)
chr1 (99-216)||(21347378-21347496)
chr1 (42-193)||(22532577-22532729)
chr1 (97-180)||(26065357-26065441)
chr1 (1-83)||(49261607-49261690)
chr1 (119-200)||(27250394-27250476)
chr1 (36-82)||(35260852-35260898)
chr1 (97-163)||(50687031-50687097)
chr1 (97-183)||(16367881-16367968)
chr1 (123-183)||(20918990-20919051)
chr1 (32-88)||(16758949-16759005)
chr1 (97-180)||(35260729-35260813)
chr1 (119-193)||(20846891-20846966)
chr1 (97-203)||(41049619-41049726)
chr1 (119-200)||(38801056-38801138)
chr1 (48-90)||(38801157-38801199)
chr1 (51-88)||(21861335-21861372)
chr1 (41-90)||(22354338-22354387)
chr1 (99-163)||(16093508-16093572)
chr1 (49-161)||(24087730-24087842)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-216)||(5760-5976)
[»] scaffold0530 (1 HSPs)
scaffold0530 (1-216)||(666-888)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-193)||(19532-19726)
[»] scaffold1984 (1 HSPs)
scaffold1984 (10-193)||(405-590)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-185)||(2313-2498)
[»] scaffold0475 (1 HSPs)
scaffold0475 (1-193)||(9343-9536)
[»] scaffold0012 (2 HSPs)
scaffold0012 (91-183)||(227849-227942)
scaffold0012 (32-96)||(225705-225769)
[»] scaffold0320 (1 HSPs)
scaffold0320 (67-216)||(12329-12478)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-193)||(45450-45645)
[»] scaffold0621 (2 HSPs)
scaffold0621 (1-183)||(6802-6987)
scaffold0621 (48-88)||(8784-8824)
[»] scaffold0839 (1 HSPs)
scaffold0839 (32-183)||(1748-1900)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-193)||(160951-161145)
[»] scaffold0228 (3 HSPs)
scaffold0228 (41-193)||(4814-4968)
scaffold0228 (41-193)||(12396-12550)
scaffold0228 (41-193)||(22348-22502)
[»] scaffold0028 (1 HSPs)
scaffold0028 (48-193)||(132967-133113)
[»] scaffold0023 (2 HSPs)
scaffold0023 (10-163)||(39864-40018)
scaffold0023 (121-193)||(101781-101854)
[»] scaffold0503 (1 HSPs)
scaffold0503 (33-193)||(12228-12388)
[»] scaffold0555 (2 HSPs)
scaffold0555 (10-112)||(10283-10385)
scaffold0555 (134-194)||(10228-10289)
[»] scaffold0150 (1 HSPs)
scaffold0150 (48-193)||(32397-32543)
[»] scaffold0165 (4 HSPs)
scaffold0165 (97-215)||(27281-27400)
scaffold0165 (47-88)||(27485-27526)
scaffold0165 (119-200)||(3855-3937)
scaffold0165 (119-200)||(7919-8001)
[»] scaffold0142 (1 HSPs)
scaffold0142 (32-193)||(17078-17240)
[»] scaffold0076 (1 HSPs)
scaffold0076 (97-205)||(24169-24279)
[»] scaffold0031 (1 HSPs)
scaffold0031 (33-193)||(20087-20247)
[»] scaffold0122 (1 HSPs)
scaffold0122 (41-193)||(25726-25879)
[»] scaffold0218 (2 HSPs)
scaffold0218 (1-89)||(7841-7929)
scaffold0218 (124-199)||(28935-29011)
[»] scaffold0021 (6 HSPs)
scaffold0021 (86-193)||(62913-63021)
scaffold0021 (14-89)||(136132-136207)
scaffold0021 (14-89)||(144840-144915)
scaffold0021 (97-203)||(135942-136049)
scaffold0021 (97-203)||(144650-144757)
scaffold0021 (41-90)||(124891-124940)
[»] scaffold0016 (2 HSPs)
scaffold0016 (43-193)||(2159-2311)
scaffold0016 (126-205)||(119200-119280)
[»] scaffold0278 (1 HSPs)
scaffold0278 (107-193)||(5966-6053)
[»] scaffold0211 (1 HSPs)
scaffold0211 (48-193)||(28470-28616)
[»] scaffold0056 (3 HSPs)
scaffold0056 (41-193)||(16876-17029)
scaffold0056 (121-200)||(79016-79096)
scaffold0056 (33-77)||(79107-79151)
[»] scaffold0413 (2 HSPs)
scaffold0413 (48-193)||(15276-15422)
scaffold0413 (97-213)||(13007-13124)
[»] scaffold0292 (2 HSPs)
scaffold0292 (41-193)||(649-802)
scaffold0292 (42-183)||(3777-3920)
[»] scaffold0235 (2 HSPs)
scaffold0235 (99-213)||(14004-14119)
scaffold0235 (119-200)||(11178-11260)
[»] scaffold0217 (1 HSPs)
scaffold0217 (42-193)||(16260-16413)
[»] scaffold0145 (1 HSPs)
scaffold0145 (41-193)||(39067-39219)
[»] scaffold0075 (3 HSPs)
scaffold0075 (97-212)||(53113-53230)
scaffold0075 (48-88)||(53314-53354)
scaffold0075 (120-200)||(7948-8029)
[»] scaffold0357 (3 HSPs)
scaffold0357 (32-87)||(15866-15921)
scaffold0357 (97-163)||(13570-13636)
scaffold0357 (97-194)||(3133-3231)
[»] scaffold0080 (2 HSPs)
scaffold0080 (14-89)||(19649-19724)
scaffold0080 (20-90)||(40198-40268)
[»] scaffold0040 (2 HSPs)
scaffold0040 (97-203)||(103234-103341)
scaffold0040 (14-89)||(103403-103478)
[»] scaffold0022 (2 HSPs)
scaffold0022 (97-183)||(80701-80788)
scaffold0022 (49-89)||(128735-128775)
[»] scaffold0628 (1 HSPs)
scaffold0628 (48-193)||(2464-2609)
[»] scaffold0627 (1 HSPs)
scaffold0627 (41-185)||(211-356)
[»] scaffold0175 (2 HSPs)
scaffold0175 (123-200)||(34509-34587)
scaffold0175 (41-90)||(13398-13447)
[»] scaffold0161 (1 HSPs)
scaffold0161 (123-200)||(2099-2177)
[»] scaffold0011 (3 HSPs)
scaffold0011 (41-193)||(52218-52372)
scaffold0011 (124-200)||(167644-167721)
scaffold0011 (41-90)||(167745-167794)
[»] scaffold0876 (1 HSPs)
scaffold0876 (120-200)||(2739-2820)
[»] scaffold0395 (2 HSPs)
scaffold0395 (49-162)||(8185-8298)
scaffold0395 (122-193)||(623-695)
[»] scaffold0130 (2 HSPs)
scaffold0130 (97-213)||(1344-1461)
scaffold0130 (122-193)||(28924-28996)
[»] scaffold0120 (3 HSPs)
scaffold0120 (42-194)||(32619-32772)
scaffold0120 (42-194)||(46233-46386)
scaffold0120 (120-183)||(16473-16537)
[»] scaffold0647 (1 HSPs)
scaffold0647 (122-193)||(5782-5854)
[»] scaffold0601 (1 HSPs)
scaffold0601 (99-216)||(7095-7213)
[»] scaffold0598 (2 HSPs)
scaffold0598 (119-200)||(717-799)
scaffold0598 (41-90)||(818-867)
[»] scaffold0456 (1 HSPs)
scaffold0456 (119-194)||(10097-10173)
[»] scaffold0100 (1 HSPs)
scaffold0100 (47-193)||(20425-20572)
[»] scaffold0305 (1 HSPs)
scaffold0305 (49-193)||(20717-20863)
[»] scaffold0123 (1 HSPs)
scaffold0123 (97-183)||(25545-25632)
[»] scaffold1137 (1 HSPs)
scaffold1137 (1-193)||(1962-2156)
[»] scaffold0718 (1 HSPs)
scaffold0718 (119-200)||(4796-4878)
[»] scaffold0427 (1 HSPs)
scaffold0427 (119-200)||(13869-13951)
[»] scaffold0358 (4 HSPs)
scaffold0358 (119-200)||(310-392)
scaffold0358 (119-200)||(5086-5168)
scaffold0358 (42-90)||(243-291)
scaffold0358 (42-90)||(5019-5067)
[»] scaffold0352 (1 HSPs)
scaffold0352 (121-194)||(17668-17742)
[»] scaffold0266 (1 HSPs)
scaffold0266 (120-193)||(18619-18693)
[»] scaffold0098 (1 HSPs)
scaffold0098 (122-211)||(29149-29239)
[»] scaffold1842 (2 HSPs)
scaffold1842 (124-200)||(714-791)
scaffold1842 (41-90)||(815-864)
[»] scaffold0351 (1 HSPs)
scaffold0351 (123-203)||(16657-16738)
[»] scaffold0261 (2 HSPs)
scaffold0261 (123-193)||(16047-16118)
scaffold0261 (100-211)||(17909-18021)
[»] scaffold1419 (1 HSPs)
scaffold1419 (49-85)||(338-374)
[»] scaffold0121 (1 HSPs)
scaffold0121 (120-183)||(8203-8267)
[»] scaffold0114 (1 HSPs)
scaffold0114 (118-203)||(15127-15213)
[»] scaffold0737 (1 HSPs)
scaffold0737 (18-89)||(1562-1633)
[»] scaffold0540 (1 HSPs)
scaffold0540 (41-183)||(684-827)
[»] scaffold0109 (1 HSPs)
scaffold0109 (100-216)||(35508-35625)
[»] scaffold0005 (1 HSPs)
scaffold0005 (100-163)||(268094-268157)
[»] scaffold0484 (1 HSPs)
scaffold0484 (119-200)||(1288-1370)
[»] scaffold0403 (1 HSPs)
scaffold0403 (119-200)||(5222-5304)
[»] scaffold0389 (1 HSPs)
scaffold0389 (123-200)||(13262-13340)
[»] scaffold0113 (1 HSPs)
scaffold0113 (119-200)||(32438-32520)
[»] scaffold0088 (1 HSPs)
scaffold0088 (119-200)||(21275-21357)
[»] scaffold0026 (2 HSPs)
scaffold0026 (120-193)||(39592-39666)
scaffold0026 (120-183)||(40242-40306)
[»] scaffold0141 (1 HSPs)
scaffold0141 (41-90)||(39783-39832)
[»] scaffold0049 (1 HSPs)
scaffold0049 (41-90)||(74980-75029)
[»] scaffold0309 (1 HSPs)
scaffold0309 (42-90)||(6917-6965)
[»] scaffold0064 (1 HSPs)
scaffold0064 (119-200)||(47360-47442)
[»] scaffold0042 (1 HSPs)
scaffold0042 (120-183)||(23973-24037)
[»] scaffold0032 (1 HSPs)
scaffold0032 (119-182)||(51953-52017)


Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 22073183 - 22073419
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca 100  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22073183 gcgacaaggatcgcatttaacctaacaaagcattctgtaactgggtaactcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactccca 22073282  T
Q  101 aaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaac 199  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  22073283 aaaatccattcttaaactattctaggttcaatctcattctagaatcttttctaatcattattacacatgttcaggcactcaaaaacctctaaggtccaac 22073382  T
Q  200 ttaaggggcaaaactactacgaaaccatgtcgactctctg 239  Q
    ||||||||||||   |||||||||||||||||||||||||    
T  22073383 ttaaggggcaaa---actacgaaaccatgtcgactctctg 22073419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 16219570 - 16219358
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca 100  Q
    |||||||  ||||||||||||||||||| | ||||||||||| |  |||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  16219570 gcgacaaagatcgcatttaacctaacaaggcattctgtaactagacaactcgcgaggcgagggcctctactcgccatggcgagttcacgtgtaactccca 16219471  T
Q  101 aaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggtccaac 199  Q
    ||||| |||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||| |  |||| || ||||||||||| |||||||| ||||    
T  16219470 aaaattcattcttaaactattccaggttcaatctcaatctaaaatctttcctaatcattattatacaagtttagacactcaaaaacatctaaggttcaac 16219371  T
Q  200 ttaaggggcaaaa 212  Q
    |||| || |||||    
T  16219370 ttaaaggtcaaaa 16219358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 10 - 163
Target Start/End: Original strand, 16056604 - 16056757
Alignment:
Q  10 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 109  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  16056604 atcgcatttaacctaacaaggcattctgtaactgggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaattcccaaaaatccat 16056703  T
Q  110 tcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 163  Q
    ||||||||||||||||||||||||||| |||| ||||||| ||| |||||||||    
T  16056704 tcttaaactattccaggttcaatctcaatctaaaatctttcctattcattatta 16056757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 32 - 239
Target Start/End: Complemental strand, 12255614 - 12255409
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 131  Q
    |||||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12255614 attctgtaactgggaaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaaaaattcattcttaaactattccaggttcaa 12255515  T
Q  132 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtc 230  Q
    ||||| |||||||||||| ||||||||||||| | | ||||| |||||||||| | |||||   |||||||||||  ||||   ||||||||| |||||     
T  12255514 tctcaatctagaatctttcctaatcattattatacatgttcaagcactcaaaatcatctaaataccaacttaaggatcaaa---actacgaaatcatgtt 12255418  T
Q  231 gactctctg 239  Q
    |||||||||    
T  12255417 gactctctg 12255409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 32 - 216
Target Start/End: Complemental strand, 2279941 - 2279756
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 131  Q
    ||||| ||||| || |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  2279941 attctataactaggcaactcgcgaggcgagggcctctactcgctatggcgagttcaggtgtaacacccaaaaatccattcttaaactattacaggttcaa 2279842  T
Q  132 tctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 216  Q
    ||||| |||| ||||||| |||||||||||||  ||| |||||||||||||||| | |||||    ||||||||||  |||||||||    
T  2279841 tctcaatctaaaatctttcctaatcattattatgcat-gttcaggcactcaaaatcatctaaatatcaacttaaggatcaaaactac 2279756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 212
Target Start/End: Original strand, 47832088 - 47832287
Alignment:
Q  14 catttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattct 112  Q
    |||||||||||| ||||| |||||||||||||| |  ||||||||||| |||||||||||||||||||||||||| ||||||||| | ||||| | ||||    
T  47832088 catttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcatgtgtaactctc-aaaattcgttct 47832186  T
Q  113 taaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaa 211  Q
    ||||||||||||| |||||||| | |||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||| |||||||| || ||||    
T  47832187 taaactattccagattcaatcttaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 47832286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 16324273 - 16324485
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca 100  Q
    |||||||| ||| ||||||||||||||| | |||||||||||||| |  |||| |||||| |||||||||||||||||||||||||   | |||||| ||    
T  16324273 gcgacaaggatcacatttaacctaacaaggcattctgtaactgggcagttcgcaaggcgagggcctctactcgccatggcgagttccaatctaactctca 16324372  T
Q  101 aaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaac 199  Q
    ||||| | ||||||||||||||||||||||||||||  ||  ||||||| ||||||||||||| | | ||||| |||||||||||| |  ||||| ||||    
T  16324373 aaaattcgttcttaaactattccaggttcaatctcaaactccaatctttcctaatcattattagacatgttcaagcactcaaaaacattcaaggttcaac 16324472  T
Q  200 ttaaggggcaaaa 212  Q
    |||| || |||||    
T  16324473 ttaaaggtcaaaa 16324485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 9389541 - 9389346
Alignment:
Q  10 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 108  Q
    ||||| |||||||||| ||| | ||||||||||||  || ||||||||||||  |||||||||||||||||||||||||| |||||||| || |||| |     
T  9389541 atcgcttttaacctaaacaaggcattctgtaactgcttagctcgcgaggcgagagcctctactcgccatggcgagttcagctgtaactcacataaattcg 9389442  T
Q  109 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggtccaacttaa 203  Q
    |||||||||||||||||||||||||||| |||| ||||||| |||||||| |||| |  ||| ||| ||||||||||| || ||||| ||||||||    
T  9389441 ttcttaaactattccaggttcaatctcaatctacaatctttcctaatcatcattatacaagtccagacactcaaaaacatccaaggttcaacttaa 9389346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 44014440 - 44014633
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  |||||||||||||||| ||| | |||||||||| || || ||||||||||||  |||||||||| |||||||||||||||||| ||||  |    
T  44014440 gcgacaatgatcgcatttaacctaaacaaggcattctgtaaccggttagctcgcgaggcgagagcctctactcaccatggcgagttcaggtgcaactaac 44014539  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaag 192  Q
    |||||| |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| ||||||    
T  44014540 aaaaattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaag 44014633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 68012 - 68198
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||| |||||||||||||||| ||| | ||||||||||||| || ||||||||||||  |||||||||||||||||||||||||  ||||||||||    
T  68012 gcgacaaggatcgcatttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagttcatctgtaactccc 68111  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaac 185  Q
    | || |   |||||||| ||||||||||||||||||| |||  ||||||| ||||||||||||  ||||| ||||||||||| |||||    
T  68112 acaagtttgttcttaaattattccaggttcaatctcaatctccaatctttcctaatcattattagacata-ttcaggcactcgaaaac 68198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 46 - 194
Target Start/End: Complemental strand, 21064971 - 21064822
Alignment:
Q  46 taactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaat 145  Q
    |||||| ||||||||  ||||||||||||||||||||||| ||||  ||| | |||||||||||||| | ||||||||| |||||||||||||||| |||    
T  21064971 taactcacgaggcgagagcctctactcgccatggcgagttaaggtaaaacactcaaaaatccattctgacactattccaagttcaatctcattctaaaat 21064872  T
Q  146 cttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 194  Q
     ||| |||||||||||  ||||| |||||||| |||| |||| ||||||||    
T  21064871 atttcctaatcattattgtacat-gttcaggccctcataaacatctaaggt 21064822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 193
Target Start/End: Complemental strand, 810936 - 810790
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 147  Q
    |||||||||||||  ||||||||||||||||||||||||||||  |  || ||||||| |||||| ||    ||||||||||||||| |||||  |||||    
T  810936 actcgcgaggcgagagcctctactcgccatggcgagttcaggtacagttcacaaaaattcattctaaattctttccaggttcaatcttattctccaatct 810837  T
Q  148 tttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    || ||||||||||||| ||| |||||||||||||||||| |||||||    
T  810836 ttcctaatcattattagatatgttcaggcactcaaaaacatctaagg 810790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 12756535 - 12756378
Alignment:
Q  36 tgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaatct 134  Q
    ||||| |||| ||||||||||||||  ||||||||||||||||| ||||||||||  | || ||||||| | |||||||||| || ||||||||||||||    
T  12756535 tgtaattgggcaactcgcgaggcgagagcctctactcgccatggtgagttcaggt-cagcttccaaaaagttcattcttaaa-taatccaggttcaatct 12756438  T
Q  135 cattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  12756437 cattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 12756378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 193
Target Start/End: Original strand, 18005963 - 18006101
Alignment:
Q  50 tcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttt 149  Q
    ||||||||||| |||||||| |||||||||||||||||||| ||||||||| || | | |||||||||||||  |||||||||||||      |||||||    
T  18005963 tcgcgaggcgagggcctctagtcgccatggcgagttcaggtataactcccacaagttcgttcttaaactattttaggttcaatctca------aatcttt 18006056  T
Q  150 tctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
      |||||||||||| | | |||||||||||||||||| |||||||    
T  18006057 cataatcattattagacatgttcaggcactcaaaaacatctaagg 18006101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 200
Target Start/End: Complemental strand, 15143844 - 15143691
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 147  Q
    |||||||||||||  |||||| ||||||||||||||| |||||   | || ||||| | |||||| |||   |||||||||||||||||||||| |||||    
T  15143844 actcgcgaggcgagagcctctgctcgccatggcgagtacaggtcagaatcacaaaagttcattctaaaatctttccaggttcaatctcattctaaaatct 15143745  T
Q  148 tttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    || ||||||||||||| | | |||||||||||||||  | |||||||| |||||    
T  15143744 ttcctaatcattattagacatgttcaggcactcaaaggcatctaaggtacaact 15143691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 163
Target Start/End: Original strand, 44116804 - 44116933
Alignment:
Q  33 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaat 132  Q
    ||||||||||| || |||||||||||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| || || |||| ||||||||    
T  44116804 ttctgtaactgagtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaatct-ttccgggttcaat 44116902  T
Q  133 ctcattctagaatcttttctaatcattatta 163  Q
    ||||||||| | ||||| |||||||||||||    
T  44116903 ctcattctacattctttcctaatcattatta 44116933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 17061783 - 17061621
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaa-ctattccaggttca 130  Q
    ||||||||| | ||| |||||||||||||  ||||||||||||||| ||||||||||||   | || ||||  |  ||||| ||| |||| |||||||||    
T  17061783 attctgtaaataggtcactcgcgaggcgagagcctctactcgccatcgcgagttcaggtcagattctcaaagttttattctaaaatctat-ccaggttca 17061685  T
Q  131 atctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  17061684 atctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 17061621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 193
Target Start/End: Original strand, 38227788 - 38227940
Alignment:
Q  42 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattct 140  Q
    ||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||| |||| |  |||||| || || |||||||||||||||||||||    
T  38227788 tgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccaaaaagtttcattctaaatct-ttccaggttcaatctcattct 38227886  T
Q  141 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  38227887 acattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 38227940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 2529733 - 2529615
Alignment:
Q  99 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 196  Q
    |||||||||||| ||||||| |  ||||| |||||||| |||| || |||  |||||||||||||  |||| ||||||||||||||| | |||||||| |    
T  2529733 caaaaatccatttttaaactttgtcaggtccaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 2529635  T
Q  197 aacttaaggggcaaaactac 216  Q
    |||||||||| |||||||||    
T  2529634 aacttaagggacaaaactac 2529615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 28505033 - 28504955
Alignment:
Q  123 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||||| |||||||| |||||    
T  28505033 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaact 28504955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 190
Target Start/End: Original strand, 14045187 - 14045281
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctcta 190  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||||| ||||    
T  14045187 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaaacatcta 14045281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 190
Target Start/End: Original strand, 14355217 - 14355311
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctcta 190  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||||| ||||    
T  14355217 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaaacatcta 14355311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 9509495 - 9509649
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 139  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||||| || |  ||||||  ||   |||||||||||||||||| |    
T  9509495 ctgggtcactcgcgaggcgagagcctctcctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcc 9509594  T
Q  140 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  9509595 tacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 9509649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 16385994 - 16385912
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  16385994 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 16385912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 40443762 - 40443844
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  40443762 attccaggttcaatctcatcctaaattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 40443844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 15754622 - 15754541
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||||||   ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  15754622 ttccaggttcaatctcattctactttctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 15754541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 180
Target Start/End: Original strand, 12901768 - 12901852
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 180  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  12901768 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 12901852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 190
Target Start/End: Original strand, 14036637 - 14036731
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcatta--ttacatagttcaggcactcaaaaacctcta 190  Q
    |||||||||||||| ||||||| | | ||||||||||||| |||| || |||  ||||||||||  ||||||| ||||||||||||||||| ||||    
T  14036637 cccaaaaatccatttttaaactttcctaggttcaatctcaatctaaaaacttgcctaatcattattttacata-ttcaggcactcaaaaacatcta 14036731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 190
Target Start/End: Original strand, 14346667 - 14346761
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcatta--ttacatagttcaggcactcaaaaacctcta 190  Q
    |||||||||||||| ||||||| | | ||||||||||||| |||| || |||  ||||||||||  ||||||| ||||||||||||||||| ||||    
T  14346667 cccaaaaatccatttttaaactttcctaggttcaatctcaatctaaaaacttgcctaatcattattttacata-ttcaggcactcaaaaacatcta 14346761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 190
Target Start/End: Complemental strand, 1867743 - 1867650
Alignment:
Q  98 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctcta 190  Q
    ||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||  |||||| |||||||||| |||||| ||||    
T  1867743 ccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactaaaaaacatcta 1867650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 27847580 - 27847498
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| ||| | ||||| |||||||| |||| | | |||||||||||||||| | |||||||| |||||    
T  27847580 attccaggttcaatctcatcctaaattctttcctaatcataattagacatgttcaggcactcaaaagcatctaaggttcaact 27847498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 3564099 - 3564026
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaag 192  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | ||||||    
T  3564099 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaag 3564026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 26212302 - 26212351
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| |||||||||||||  ||||||||||||| ||||||||||||||    
T  26212302 ctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggt 26212351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 35366540 - 35366631
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattcta 141  Q
    ||||||||||||  ||||| |||||||| ||||||||  |||  ||| | ||| |||||||||| | ||||||||| ||||||||||||||||    
T  35366540 ctcgcgaggcgagagcctc-actcgccacggcgagttagggtaaaacactcaagaatccattctgacactattccaagttcaatctcattcta 35366631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 9177470 - 9177431
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagttcag 88  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  9177470 ctcgcgaggcgagggcctctactcgctatggcgagttcag 9177431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 12699218 - 12699292
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||||||||||||| |||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  12699218 ttccaggttcaatttcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 12699292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 15008313 - 15008263
Alignment:
Q  39 aactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 89  Q
    ||||||| ||||||||||||||  |||||||||||| |||| |||||||||    
T  15008313 aactgggcaactcgcgaggcgagagcctctactcgctatggtgagttcagg 15008263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 12901609 - 12901682
Alignment:
Q  14 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttca 87  Q
    ||||||||||||||| |  || ||||| |||  |||||| |||||||  |||||||||||| ||||||||||||    
T  12901609 catttaacctaacaaggtgttttgtaaatggacaactcgtgaggcgagagcctctactcgctatggcgagttca 12901682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 180
Target Start/End: Complemental strand, 15008199 - 15008118
Alignment:
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 180  Q
    ||||||||||| | ||||| | ||||||||||||||| |||| ||  || |||||||||||||| | | |||||||||||||    
T  15008199 aaaaatccattttaaaactttcccaggttcaatctcaatctaaaaaattgtctaatcattattatacatgttcaggcactca 15008118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 40443695 - 40443744
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  40443695 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 40443744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 11995768 - 11995712
Alignment:
Q  145 tcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||| ||||||||||||| | | |||||||||||||||||| |||||||| |||||    
T  11995768 tctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaact 11995712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 205
Target Start/End: Complemental strand, 17017146 - 17017040
Alignment:
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtcca 197  Q
    ||||||||||| ||||||| |  |  ||||||||||| |||| || |||  ||||||||||||  ||||| ||||||||||||||| | ||||| || ||    
T  17017146 aaaaatccatttttaaactttctcttgttcaatctcaatctaaaaacttgcctaatcattattgtacata-ttcaggcactcaaaatcatctaaagttca 17017048  T
Q  198 acttaagg 205  Q
    ||||||||    
T  17017047 acttaagg 17017040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 134; Significance: 7e-70; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 32803 - 33039
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca 100  Q
    |||||||  ||||||||||||| ||||| | |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32803 gcgacaaagatcgcatttaacccaacaaggcattctgtaactgggtagctcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactccca 32902  T
Q  101 aaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaac 199  Q
    |||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||||||||||||| | ||||||||||||| || | ||||| || ||||    
T  32903 aaaatccattcttagactattccaagttcaatctcaatctagaatctttcctaatcattattacacatgttcaggcactcagaatcatctaaagttcaac 33002  T
Q  200 ttaaggggcaaaactactacgaaaccatgtcgactctctg 239  Q
    ||||||  ||||   ||||||||| ||||| |||||||||    
T  33003 ttaaggaccaaa---actacgaaatcatgttgactctctg 33039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 51619 - 51545
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||||||||||| ||| | ||| | ||||||||||||| | | |||||||||||||||| | |||||||    
T  51619 ttccaggttcaatctcatcctacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 51545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 131; Significance: 4e-68; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 20 - 239
Target Start/End: Original strand, 8302 - 8519
Alignment:
Q  20 acctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaacta 119  Q
    ||||||||||| ||| |||||||||  |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8302 acctaacaaagcattatgtaactggacaactcgcgaggcgagggcctccactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaacta 8401  T
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactacta 218  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |  ||||| ||| ||||||| | |||||| ||||||||||| ||||   ||||    
T  8402 ttccaggttcaatctcaatctagaatcttttctaatcattattacacatattcagacacccaaaaacatttaaggttcaacttaagggtcaaa---acta 8498  T
Q  219 cgaaaccatgtcgactctctg 239  Q
    ||||| ||||| |||||||||    
T  8499 cgaaatcatgttgactctctg 8519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 7077 - 7271
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||| |||||||||||||||| ||| | ||||||||||| | || ||||| ||||||  ||||||||||||||||||||||||||||  |  || |    
T  7077 gcgacaagaatcgcatttaacctaaacaaggcattctgtaactagttagctcgcaaggcgagagcctctactcgccatggcgagttcaggttcagttcac 7176  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||| |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  7177 aaaaattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 7271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 10 - 239
Target Start/End: Original strand, 23019683 - 23019910
Alignment:
Q  10 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 109  Q
    ||||||||||||||||| ||| ||| ||||| |||  |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||    
T  23019683 atcgcatttaacctaaccaagcattttgtaattggacaactcgcgaggcaagggcctctactcgccatggcgagttcaggtgtaactcccaaaaattcat 23019782  T
Q  110 tcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggc 208  Q
    ||||||| ||||||||||||||||||| |||| ||||||| ||||||||||| ||| | |||||||||||||||| | |||||||| ||||||||||| |    
T  23019783 tcttaaaatattccaggttcaatctcaatctaaaatctttcctaatcattatcacacatgttcaggcactcaaaagcatctaaggttcaacttaagggtc 23019882  T
Q  209 aaaactactacgaaaccatgtcgactctctg 239  Q
    |||   ||||||||| ||||| |||||||||    
T  23019883 aaa---actacgaaatcatgttgactctctg 23019910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 25644607 - 25644801
Alignment:
Q  19 aacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaact 118  Q
    |||||||  ||| |||||| ||| ||| |||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  25644607 aacctaaacaagcattctgaaaccgggcaactcgcgaggcgagggcctctactcgctatggcgagttcgggtgtaactcccaaaaatccattcttaaact 25644706  T
Q  119 attccaggttcaatctcattctagaatcttttctaatca---ttattacatagttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaa 212  Q
    ||| |||||||||||||| |||| ||||||| |||||||   ||| ||||| |  ||||||||||||||| |||||||| |||||||| || |||||    
T  25644707 atttcaggttcaatctcaatctaaaatctttcctaatcaacgtta-tacat-gaacaggcactcaaaaacatctaaggttcaacttaaaggtcaaaa 25644801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 27333138 - 27332926
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca 100  Q
    |||||||| ||| ||||||||||||||||| ||||||||| |||| |  |||||||||||  ||||||||||||||||||||||||||||| ||||| ||    
T  27333138 gcgacaaggatcacatttaacctaacaaagcattctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcaca 27333039  T
Q  101 aaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaac 199  Q
    ||| | |||||| |||   |||||||||||| ||||||||| ||||||| |||||||| |||| | | |||||| ||||||||| | |||||||| ||||    
T  27333038 aaacttcattctaaaatctttccaggttcaacctcattctaaaatctttcctaatcatcattatacatgttcagccactcaaaagcatctaaggttcaac 27332939  T
Q  200 ttaaggggcaaaa 212  Q
    |||| || |||||    
T  27332938 ttaaaggtcaaaa 27332926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 27393878 - 27393666
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca 100  Q
    |||||||| ||| ||||||||||||||||| ||||||||| |||| |  |||||||||||  ||||||||||||||||||||||||||||| ||||| ||    
T  27393878 gcgacaaggatcacatttaacctaacaaagcattctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcaca 27393779  T
Q  101 aaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaac 199  Q
    ||| | |||||| |||   |||||||||||| ||||||||| ||||||| |||||||| |||| | | |||||| ||||||||| | |||||||| ||||    
T  27393778 aaacttcattctaaaatctttccaggttcaacctcattctaaaatctttcctaatcatcattatacatgttcagccactcaaaagcatctaaggttcaac 27393679  T
Q  200 ttaaggggcaaaa 212  Q
    |||| || |||||    
T  27393678 ttaaaggtcaaaa 27393666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 22080543 - 22080391
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 148  Q
    ||||||||||||  |||||||||||||||||||||||||||| ||||||||| || | | |||||||||||||||||||||||||| | |||  ||||||    
T  22080543 ctcgcgaggcgagagcctctactcgccatggcgagttcaggtataactcccataagttcgttcttaaactattccaggttcaatcttaatctctaatctt 22080444  T
Q  149 ttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||| | | |||||| ||||||||||| |||||||| |||||    
T  22080443 ttctaatcattattagacatgttcagtcactcaaaaacatctaaggttcaact 22080391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 52 - 203
Target Start/End: Complemental strand, 25956424 - 25956272
Alignment:
Q  52 gcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttc 151  Q
    |||||||||  |||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  25956424 gcgaggcgagagcctctactcgccatggcgaatacaggtgtaactccaaaaaatccattcttaaactattccaggttaaatctcaatctagaatcttttc 25956325  T
Q  152 taatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 203  Q
     |||| | |||| | | |||||||||||||||||  |||||| | ||||||||    
T  25956324 caatcgtaattagacatgttcaggcactcaaaaatatctaagattcaacttaa 25956272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 4668067 - 4667874
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca 100  Q
    |||||||| ||||||||||||||| ||| | ||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||||||  |  || ||    
T  4668067 gcgacaaggatcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggttcagttcaca 4667968  T
Q  101 aaaatccattcttaaact-attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaagg 193  Q
    ||||| ||||| ||||||  |||||||| |||||||| |||| | ||||| |||||| |||||| | | |||||||||||||||| | |||||||    
T  4667967 aaaattcattc-taaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaagcatctaagg 4667874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 4674914 - 4674721
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca 100  Q
    |||||||| ||||||||||||||| ||| | ||||||||| |||||| ||||||||||||  |||||||||||||||| |||||| ||||  |  || ||    
T  4674914 gcgacaaggatcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatgacgagttaaggttcagttcaca 4674815  T
Q  101 aaaatccattcttaaact-attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaagg 193  Q
    ||||| ||||| ||||||  |||||||| |||||||| |||| | ||||| |||||| |||||| | | |||||||||||||||| | |||||||    
T  4674814 aaaattcattc-taaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaagcatctaagg 4674721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 19652461 - 19652647
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  |||||||||| ||||| ||| | ||| ||||||| | || | ||||||||||  ||||||||||||||||||||||||||||  || || |    
T  19652461 gcgacaaagatcgcatttatcctaaacaaggtattttgtaactagttagcccgcgaggcgagagcctctactcgccatggcgagttcaggtacaattcac 19652560  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 185  Q
    |||||| |||||| ||    |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||||||||||||||||    
T  19652561 aaaaattcattctaaagtctttccaggttcaatctcattcttcaatctttcctaatcattattagacatgttcaggcactcaaaaac 19652647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 193
Target Start/End: Complemental strand, 4185673 - 4185484
Alignment:
Q  5 caagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa 104  Q
    |||| ||||||||||||||| ||| | ||||| ||| |||||| ||||||||||||  ||||||||||||||||||||||||||||  |  || ||||||    
T  4185673 caaggatcgcatttaacctagcaaggcattctataaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggttcagttcacaaaaa 4185574  T
Q  105 tccattcttaaact-attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaagg 193  Q
    | ||||| ||||||  ||||||||||||||||| |||| | |||||  ||||| |||||| | | ||||| |||||||||| | |||||||    
T  4185573 ttcattc-taaactctttccaggttcaatctcactctacattctttcataatcgttattagacttgttcatgcactcaaaagcatctaagg 4185484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 4189223 - 4189416
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca 100  Q
    |||||||  ||||||||||||||| ||| | ||||||||| |||||| ||||||||||||  |||||||||||||||| |||||| ||||  |  || ||    
T  4189223 gcgacaacgatcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatgacgagtttaggttcagttcaca 4189322  T
Q  101 aaaatccattcttaaact-attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaagg 193  Q
    ||||| ||||| ||||||  |||||||| |||||||| |||| | ||||| |||||| |||||| | | |||||||||||||||| | |||||||    
T  4189323 aaaattcattc-taaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaagcatctaagg 4189416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 33 - 193
Target Start/End: Original strand, 18457014 - 18457174
Alignment:
Q  33 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 131  Q
    |||||||| |||| ||||||||||||||  |||||||||||||||||| |||||||||  | || ||||||| | ||||||| || || |||||||||||    
T  18457014 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggctagttcaggt-cagcttccaaaaagttcattctt-aattaatccaggttcaa 18457111  T
Q  132 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  18457112 tctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 18457174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 193
Target Start/End: Complemental strand, 29808691 - 29808544
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactatt-ccaggttcaatctcattctagaatc 146  Q
    |||||||||||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| ||| | || |||||||||||||||||||| | ||    
T  29808691 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctacattc 29808592  T
Q  147 ttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||||||||||||||||| | | |||||||||||||||| | |||||||    
T  29808591 ttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 29808544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 9098206 - 9098087
Alignment:
Q  98 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacat-agttcaggcactcaaaaacctctaaggtcc 196  Q
    ||||||||||||| ||||||| | ||||||||||| ||| ||||||| ||| |||||||||||||| ||  ||||||||||||| || | ||||| || |    
T  9098206 ccaaaaatccatttttaaactttcccaggttcaatatcaatctagaaacttgtctaatcattattatatctgttcaggcactcagaatcatctaaagttc 9098107  T
Q  197 aacttaaggggcaaaactac 216  Q
     ||||||||| |||||||||    
T  9098106 gacttaagggtcaaaactac 9098087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 193
Target Start/End: Complemental strand, 28496280 - 28496134
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattctagaatc 146  Q
    |||||||||||||  |||||| |||||||||||||||||||||   | || ||||| |  |||||| |  || |||||||||||||||||||||| | ||    
T  28496280 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaaagtttcattctaagtct-ttccaggttcaatctcattctacattc 28496182  T
Q  147 ttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||||||||||||||||| | | |||||||||||||||| | |||||||    
T  28496181 ttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 28496134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 20360707 - 20360632
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  20360707 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 20360632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 29060847 - 29061000
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 140  Q
    |||||| |||||||||||||  ||||||||||| | ||||||||||||||   | | |||||| | ||||||  ||   |||||||||||||||||| ||    
T  29060847 ctgggtcactcgcgaggcgagagcctctactcgtcgtggcgagttcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatcct 29060946  T
Q  141 agaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 193  Q
    | | || || ||||||||||||  |||| |||||||||||||||| | |||||||    
T  29060947 acattccttcctaatcattattggacat-gttcaggcactcaaaagcatctaagg 29061000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 193
Target Start/End: Complemental strand, 19303355 - 19303202
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 139  Q
    |||||| |||| ||||||||  |||||| |||||| ||||||||||||||   | | |||||| |  |||||| || || ||| ||||||||||||||||    
T  19303355 ctgggtcactctcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaatcttttc-aggttcaatctcattc 19303257  T
Q  140 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  19303256 tacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 19303202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 20638030 - 20637948
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  20638030 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 20637948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 1561689 - 1561770
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||||||   ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  1561689 ttccaggttcaatctcattctactttctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 1561770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 20109578 - 20109698
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 195  Q
    ||||| |||||||| ||||||| | | ||||||||||||| |||| || |||  ||||||||||||| | | ||||||||||||| || | ||||| ||     
T  20109578 cccaataatccatttttaaactttcctaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcagaatcatctaaagtt 20109677  T
Q  196 caacttaaggggcaaaactac 216  Q
    ||||||||||  |||||||||    
T  20109678 caacttaaggatcaaaactac 20109698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 19668653 - 19668728
Alignment:
Q  14 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 89  Q
    ||||||||||||||| |  |||||||| |||  | ||||||||||||  |||||||||||| ||||||||||||||    
T  19668653 catttaacctaacaaggtgttctgtaattggacagctcgcgaggcgagagcctctactcgctatggcgagttcagg 19668728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 25629169 - 25629050
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 140  Q
    |||||| |||||||||||||  |||||| ||||||| ||||||| |||||   | || ||||| |  ||||| |||   |||||||||||||||||||||    
T  25629169 ctgggtcactcgcgaggcgagagcctctgctcgccacggcgagtacaggtcataatcacaaaagtttattctaaaatatttccaggttcaatctcattct 25629070  T
Q  141 agaatcttttctaatcatta 160  Q
    | ||| ||| ||||||||||    
T  25629069 acaatatttcctaatcatta 25629050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 18821566 - 18821484
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| ||| | ||| | ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  18821566 attccaggttcaatctcatcctacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaaggttcaact 18821484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 22779962 - 22779888
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  22779962 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22779888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 31155252 - 31155163
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||||| | ||||||||||||||||| | ||  |||||  ||||| ||||||||||||  |||||| |||||||||| |||| |||||    
T  31155252 gcgacaaggaccgcatttaacctaacaaggcatgttgtaaaggggtagctcgcgaggcgagagcctctgctcgccatggagagtacaggt 31155163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 16920380 - 16920298
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||| |||||| || ||| | ||||||||||||||||||  ||||| ||||||||||||||| | |||||||| |||||    
T  16920380 attccaggtacaatcttatcctacattcttttctaatcattattagacata-ttcaggcactcaaaagcatctaaggttcaact 16920298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 87
Target Start/End: Original strand, 17106048 - 17106086
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagttca 87  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  17106048 ctcgcgagtcgagggcctctactcgccatggcgagttca 17106086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 18409562 - 18409488
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||||||||||||||| | ||||| |||||||||| || | | ||| |||||||||||| | |||||||    
T  18409562 ttccaggttcaatctcattctacattctttcctaatcattaatagacatgttaaggcactcaaaagcatctaagg 18409488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 11185808 - 11185857
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| |||| |||||||| ||||||| |||||| ||||||||||||||    
T  11185808 ctgggtcactcacgaggcgagggcctctgctcgccgtggcgagttcaggt 11185857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 16920448 - 16920399
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| |||||| ||||||  |||||| |||||||||||||||||||||    
T  16920448 ctgggtcactcgcaaggcgagagcctctgctcgccatggcgagttcaggt 16920399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 18177471 - 18177438
Alignment:
Q  54 gaggcgatggcctctactcgccatggcgagttca 87  Q
    ||||||| ||||||||||||||||||||||||||    
T  18177471 gaggcgagggcctctactcgccatggcgagttca 18177438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 18204400 - 18204433
Alignment:
Q  54 gaggcgatggcctctactcgccatggcgagttca 87  Q
    ||||||| ||||||||||||||||||||||||||    
T  18204400 gaggcgagggcctctactcgccatggcgagttca 18204433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 18821626 - 18821585
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    ||||||||||||  |||||| |||||||||||||||||||||    
T  18821626 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggt 18821585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 20360775 - 20360726
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| |||||||||||||  |||||  |||||||||||||||||||||    
T  20360775 ctgggtcactcgcgaggcgagagcctcagctcgccatggcgagttcaggt 20360726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 16830111 - 16830223
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 148  Q
    ||||||||||||  |||||||||||||| |||||||| ||||  ||| | ||| |||||||||| |  |  ||||  |||||||||||||||| ||  ||    
T  16830111 ctcgcgaggcgagagcctctactcgccacggcgagttaaggtaaaacgctcaagaatccattctgactcatttccgagttcaatctcattctaaaacttt 16830210  T
Q  149 ttctaatcattat 161  Q
      |||||||||||    
T  16830211 gcctaatcattat 16830223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 19023814 - 19023878
Alignment:
Q  99 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 163  Q
    |||||||||||| ||||||| |  |||||||||||||| |||| || |||  |||||||||||||    
T  19023814 caaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttgcctaatcattatta 19023878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 19668812 - 19668918
Alignment:
Q  98 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtc 195  Q
    |||||||| |||| |||||||   ||||||||||||||| | || || ||| ||||||||||||  ||||| |||||| |||||| |||| ||||||||     
T  19668812 ccaaaaattcatttttaaacttccccaggttcaatctcaatataaaaacttgtctaatcattatgatacat-gttcagacactcagaaacatctaaggtt 19668910  T
Q  196 caacttaa 203  Q
    | ||||||    
T  19668911 cgacttaa 19668918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 10 - 216
Target Start/End: Original strand, 10804 - 11011
Alignment:
Q  10 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 109  Q
    ||||||||||||||||||| | ||| || |||| |||||||||||||||||  |||||||||||| |||||||||||||||||||||| ||||||| |||    
T  10804 atcgcatttaacctaacaaggcattttggaactaggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcacaaaaattcat 10903  T
Q  110 tcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggc 208  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||| | |||||||||||||||||| |||||| | ||||||||||  |    
T  10904 tcttaaactattccaggttcaatctcagtctaggatctttcctaatcattattacacatgttcaggcactcaaaaacatctaagattcaacttaaggatc 11003  T
Q  209 aaaactac 216  Q
    ||||||||    
T  11004 aaaactac 11011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 4e-62; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 14 - 239
Target Start/End: Complemental strand, 26011875 - 26011652
Alignment:
Q  14 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattctt 113  Q
    ||||||||||||||||| ||||||||||| |  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26011875 catttaacctaacaaagcattctgtaactagacaactcgcgaggcgaaggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattctt 26011776  T
Q  114 aaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaa 212  Q
    ||||||||||||||||||||||| | ||||||||||  |||||||||||||| | ||| || |||||| || | ||||| || ||||||||||  ||||     
T  26011775 aaactattccaggttcaatctcaatttagaatctttcttaatcattattacacatgtttagacactcataatcatctaaagttcaacttaaggatcaaa- 26011677  T
Q  213 ctactacgaaaccatgtcgactctctg 239  Q
      ||||||||| ||||| |||||||||    
T  26011676 --actacgaaatcatgttgactctctg 26011652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 32 - 239
Target Start/End: Original strand, 22144348 - 22144553
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 131  Q
    |||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22144348 attctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaaaaatccattcttaaattattccaggttcaa 22144447  T
Q  132 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtc 230  Q
    ||||| |||||||||||| ||||||||| ||||| | |||||||||||||||| | |||||   |||||||||||  ||||   ||||||||| |||||     
T  22144448 tctcaatctagaatctttcctaatcattgttacacatgttcaggcactcaaaatcatctaaataccaacttaaggatcaaa---actacgaaatcatgtt 22144544  T
Q  231 gactctctg 239  Q
    |||||||||    
T  22144545 gactctctg 22144553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 21329350 - 21329137
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  |||||||||||||||| ||| | ||||||||||| ||||| |||||||||||  |||||||||||| |||||||||||| ||| |||||||    
T  21329350 gcgacaaagatcgcatttaacctaaacaaggcattctgtaactaggtaattcgcgaggcgagagcctctactcgctatggcgagttcaagtgcaactccc 21329251  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaa 198  Q
    |||||| ||||| |||| ||||||||||||||||||| ||||||||||||||||||||| | || | | |||||||||||||||||| |||||||| |||    
T  21329250 aaaaattcattcctaaattattccaggttcaatctcaatctagaatcttttctaatcataactagacatgttcaggcactcaaaaacatctaaggttcaa 21329151  T
Q  199 cttaaggggcaaaa 212  Q
    ||||| || |||||    
T  21329150 cttaaaggtcaaaa 21329137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 5889030 - 5888813
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  |||||||||||||||| ||| | ||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||||||| ||||| |    
T  5889030 gcgacaaagatcgcatttaacctaaacaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcac 5888931  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcca 197  Q
    ||| || |||||||||||||||||| ||||||||||| |||| ||||||| |||||||| ||  |||| ||||||||||||||||||| |||||| | |     
T  5888930 aaagattcattcttaaactattccatgttcaatctcaatctacaatctttcctaatcatcatcataca-agttcaggcactcaaaaacatctaagcttcg 5888832  T
Q  198 acttaaggggcaaaactac 216  Q
    |||||| || |||||||||    
T  5888831 acttaaaggtcaaaactac 5888813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 21741398 - 21741181
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  ||||| ||||||||||  |||| ||| ||||||||| || ||| ||||||||  ||||||||||||||||||||||||||||| ||||| |    
T  21741398 gcgacaaagatcgcttttaacctaaacaagacattatgtaactggttagctcacgaggcgagagcctctactcgccatggcgagttcaggtgcaactcac 21741299  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcca 197  Q
    | |||| | |||||||||||||||||||||||||||| |||| ||||||| ||| |||| ||  |||| ||||||||||||||||||  |||||||| |     
T  21741298 ataaattcgttcttaaactattccaggttcaatctcaatctataatctttcctattcatcatcataca-agttcaggcactcaaaaatatctaaggttcg 21741200  T
Q  198 acttaaggggcaaaactac 216  Q
    |||||| || |||||||||    
T  21741199 acttaaaggtcaaaactac 21741181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 193
Target Start/End: Complemental strand, 22959385 - 22959194
Alignment:
Q  4 acaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaa 102  Q
    ||||| |||||||||||||||| ||| | ||||||||||| | || ||||||||||||  ||||||||||||||||||||||||||||  |  || ||||    
T  22959385 acaagaatcgcatttaacctaaacaaggcattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttcaggttcagttcacaaa 22959286  T
Q  103 aatccattcttaaactat-tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||| ||||| |||| | | ||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  22959285 aattcattc-taaagtctctccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 22959194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 21565842 - 21566004
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 131  Q
    ||||||||||| | || ||| ||||||||  |||||| |||||||||||||||||||||  || || | ||||| |||||| |||   ||||||||||||    
T  21565842 attctgtaactagttagctcacgaggcgagagcctctgctcgccatggcgagttcaggtacaattcacgaaaattcattctaaaatctttccaggttcaa 21565941  T
Q  132 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  21565942 tctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 21566004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 21502007 - 21501917
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgt 92  Q
    ||||||| |||||||||||||| ||||| | |||||| ||||||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  21502007 gcgacaaatatcgcatttaacccaacaaggcattctg-aactgggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgt 21501917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 212
Target Start/End: Complemental strand, 21498785 - 21498659
Alignment:
Q  87 aggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 185  Q
    ||||||||||| |||||||  |||||| |||||||||||||||||||||| |||| ||||| | ||||| ||||||| | | ||||||||||||||||||    
T  21498785 aggtgtaactctcaaaaatttattcttcaactattccaggttcaatctcaatctacaatctctcctaataattattatacatgttcaggcactcaaaaac 21498686  T
Q  186 ctctaaggtccaacttaaggggcaaaa 212  Q
     || ||||| |||||||| || |||||    
T  21498685 atccaaggttcaacttaaaggtcaaaa 21498659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 11581068 - 11580906
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaa-ctattccaggttca 130  Q
    ||||||||| ||||| |||||||||||||  |||||| |||||||||||||||||||||   | || ||||  |  ||||| ||| ||| ||||||||||    
T  11581068 attctgtaaatgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaagttttattctaaaatcta-tccaggttca 11580970  T
Q  131 atctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  11580969 atctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcttctaagg 11580906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 200
Target Start/End: Original strand, 1096765 - 1096934
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 131  Q
    |||||||  |||||| |||||||||||||  ||||||||||||| ||||||||||||||   | | |||||| | ||||||  ||   |||||| |||||    
T  1096765 attctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagatttccaaaagttcattctgcaatctttccagattcaa 1096864  T
Q  132 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    |||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  1096865 tctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 1096934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 21871425 - 21871225
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca 100  Q
    |||||||| ||||| ||||||||| ||| | ||||||||  ||| || |||||||| ||   |||||||||||||||||||||| |||||   | || ||    
T  21871425 gcgacaaggatcgcgtttaacctagcaaggcattctgtatttggttagctcgcgagccgggagcctctactcgccatggcgagtacaggtcagaatcaca 21871326  T
Q  101 aaaatccattct-taaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaa 198  Q
    ||| |||||||  ||| || |||||||||||||||||| ||| | ||||| |||||||||| || | | |||||||||||||||| | |||||||| |||    
T  21871325 aaagtccattccataatct-ttccaggttcaatctcatcctacactctttcctaatcattaataaacatgttcaggcactcaaaagcatctaaggttcaa 21871227  T
Q  199 ct 200  Q
    ||    
T  21871226 ct 21871225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 21875705 - 21875505
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca 100  Q
    |||||||| ||||| ||||||||| ||| | ||||||||  ||| || |||||||| ||   |||||||||||||||||||||| |||||   | || ||    
T  21875705 gcgacaaggatcgcgtttaacctagcaaggcattctgtatttggttagctcgcgagccgggagcctctactcgccatggcgagtacaggtcagaatcaca 21875606  T
Q  101 aaaatccattct-taaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaa 198  Q
    ||| |||||||  ||| || |||||||||||||||||| ||| | ||||| |||||||||| || | | |||||||||||||||| | |||||||| |||    
T  21875605 aaagtccattccataatct-ttccaggttcaatctcatcctacactctttcctaatcattaataaacatgttcaggcactcaaaagcatctaaggttcaa 21875507  T
Q  199 ct 200  Q
    ||    
T  21875506 ct 21875505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 193
Target Start/End: Complemental strand, 21985961 - 21985808
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 139  Q
    |||||| ||||||||||||| ||||||| || ||| ||||||||||||||   | | |||||| |  |||||| || || ||||||||||||||||||||    
T  21985961 ctgggtcactcgcgaggcgagggcctctgcttgccgtggcgagttcaggtcagaattccaaaagtttcattctaaatct-ttccaggttcaatctcattc 21985863  T
Q  140 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  21985862 tacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 21985808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 36154651 - 36154479
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaa-ctattccaggttca 130  Q
    ||||||||| | ||| |||||||||||||  ||||||||||||||||||||||||||||   | || ||||  |  ||||| ||| ||| ||||||||||    
T  36154651 attctgtaaataggtcactcgcgaggcgagagcctctactcgccatggcgagttcaggtcagattctcaaagttttattctaaaatcta-tccaggttca 36154553  T
Q  131 atctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 203  Q
    |||||| |||| | ||||| ||||||||||||| | | ||||| |||||||||| | |||||||  ||||||||    
T  36154552 atctcactctacattctttcctaatcattattagacatgttcaagcactcaaaagcatctaaggatcaacttaa 36154479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 43 - 193
Target Start/End: Complemental strand, 23390309 - 23390157
Alignment:
Q  43 gggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatccattcttaaactattccaggttcaatctcattcta 141  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||   | ||||| ||  | ||||||  ||   |||||||||||||||||| |||    
T  23390309 gggtcactcgtgaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatccta 23390210  T
Q  142 gaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
     | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  23390209 cattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 23390157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 19669165 - 19669360
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactc-c 98  Q
    |||||||| ||| |||||| ||||| ||| | ||||||||||| | || || | |||||||  |||||||| |||||||||||||||||||  || || |    
T  19669165 gcgacaagaatcacatttatcctaaacaaggcattctgtaactagttagctggtgaggcgagagcctctacacgccatggcgagttcaggtacaattcac 19669264  T
Q  99 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
     |||||| |||||| ||    ||||| ||||||||||||||   ||||||| ||||||||||||| | | |||||| ||||||||||| |||||||    
T  19669265 aaaaaattcattctaaagtctttccacgttcaatctcattccccaatctttcctaatcattattagacatgttcagacactcaaaaacatctaagg 19669360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 20026619 - 20026501
Alignment:
Q  99 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcca 197  Q
    |||||||||||| ||||||| | ||| ||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||||| | ||||| |  |     
T  20026619 caaaaatccatttttaaactttcccatgttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcaaaatcatctaaagatcg 20026520  T
Q  198 acttaaggggcaaaactac 216  Q
    ||||||||| |||||||||    
T  20026519 acttaagggtcaaaactac 20026501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 205
Target Start/End: Complemental strand, 22177901 - 22177792
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 194  Q
    |||||||||||||| ||||||| |  ||||||||| |||| |||| || |||  |||||||||||  |||||| ||||||||||||||| | |||| |||    
T  22177901 cccaaaaatccatttttaaactttctcaggttcaaactcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaatcatctagggt 22177803  T
Q  195 ccaacttaagg 205  Q
     ||||||||||    
T  22177802 tcaacttaagg 22177792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 21292717 - 21292635
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| ||| | ||||| ||||| ||||||| | | |||||||||||||||| | |||||||| |||||    
T  21292717 attccaggttcaatctcatcctacattctttcctaattattattagacatgttcaggcactcaaaagcatctaaggttcaact 21292635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 24529527 - 24529681
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 139  Q
    |||||| |||||||||||||  |||||| |||||| |||||||||||| |   | | |||||| |  ||||||  |||  |||||||||||||||||| |    
T  24529527 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcagatcagaattccaaaagtttcattctacaacctttccaggttcaatctcatcc 24529626  T
Q  140 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    || | ||||| ||||||||||||| | | ||||||||||| |||| | |||||||    
T  24529627 tacattctttcctaatcattattagacatgttcaggcactgaaaagcatctaagg 24529681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 19660572 - 19660491
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||| |||||||||| | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  19660572 ttccaggtttaatctcattccacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 19660491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 9078338 - 9078402
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 183  Q
    |||||||||||||||||||||| | | ||| ||||||||||||| | | ||||||||||||||||    
T  9078338 ttccaggttcaatctcattctacattttttcctaatcattattagacatgttcaggcactcaaaa 9078402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 87
Target Start/End: Original strand, 25744036 - 25744074
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagttca 87  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  25744036 ctcgcgaggcgagagcctctactcgccatggcgagttca 25744074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 9078259 - 9078308
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  9078259 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 9078308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 21292785 - 21292736
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  21292785 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 21292736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 22075325 - 22075374
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  22075325 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 22075374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 22119928 - 22119847
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    |||||||||||||||||| ||| | ||||| ||||||| ||||| | | |||||||||||||||  | |||||||| |||||    
T  22119928 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaact 22119847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 20469702 - 20469654
Alignment:
Q  40 actgggtaactcgcgaggcgatggcctctactcgccatggcgagttcag 88  Q
    |||| |||||||||||||||||   |||||||||| |||||||||||||    
T  20469702 actgagtaactcgcgaggcgatccactctactcgctatggcgagttcag 20469654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 7911 - 7695
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca 100  Q
    |||||||  ||||||||||||||| ||| | |||||| |||  |||||||||||||||||  |||||||||||| |||||||||||||||||||| ||||    
T  7911 gcgacaaagatcgcatttaacctagcaaggcattctggaacaaggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaaccccca 7812  T
Q  101 aaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaac 199  Q
    ||||| |||||||||||||||| ||||||||||||| ||||| |||||| ||||||||||||||| | |||||| ||||||||||| |||||||| ||||    
T  7811 aaaattcattcttaaactattctaggttcaatctcagtctaggatctttcctaatcattattacacatgttcagacactcaaaaacatctaaggttcaac 7712  T
Q  200 ttaaggggcaaaactac 216  Q
    ||||||  |||||||||    
T  7711 ttaaggatcaaaactac 7695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 4e-56; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 36 - 216
Target Start/End: Complemental strand, 2051018 - 2050839
Alignment:
Q  36 tgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctc 135  Q
    |||||||||| ||||| ||||||||  |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  2051018 tgtaactgggcaactcacgaggcgagagcctctactcgctatggagagttcaggtgtaactcccaaaaatccattcttaaactattc--ggttcaatctc 2050921  T
Q  136 attctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 216  Q
    | |||||||||||| ||||||||||||||| | ||| |||||||||||||| |||||||| ||||||||||| |||||||||    
T  2050920 aatctagaatctttcctaatcattattacacatgttgaggcactcaaaaacatctaaggttcaacttaagggtcaaaactac 2050839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 32 - 239
Target Start/End: Complemental strand, 52523550 - 52523345
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 131  Q
    |||||||||||||| ||||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52523550 attctgtaactgggcaactcgtcaggcgagggcctctactcgctatggcgagttcaggtgtaactcccaaaaatccattcttaaactgttccaggttcaa 52523451  T
Q  132 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtc 230  Q
    | |||  ||||||||||| ||||| ||||||||| | |||||||||||||||| | |||||   |||||||||||  ||||   ||||||||| |||||     
T  52523450 tatcaaactagaatctttcctaataattattacacatgttcaggcactcaaaatcatctaaataccaacttaaggaccaaa---actacgaaatcatgtt 52523354  T
Q  231 gactctctg 239  Q
    |||||||||    
T  52523353 gactctctg 52523345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 14 - 204
Target Start/End: Original strand, 324515 - 324706
Alignment:
Q  14 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattctt 113  Q
    ||||||||||||||| |  |||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||| ||||||||||||| |||||||    
T  324515 catttaacctaacaaggtgttctgtaacttggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgcaactcccaaaaattcattctt 324614  T
Q  114 aaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaag 204  Q
    |||||||||   |||||||||||||||| ||||||| |||||||||||  |||||| ||||||||||||||| | ||||| || |||||||||    
T  324615 aaactattctcagttcaatctcattctacaatctttcctaatcattattatacata-ttcaggcactcaaaatcatctaaagttcaacttaag 324706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 212
Target Start/End: Original strand, 14234770 - 14234969
Alignment:
Q  14 catttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattct 112  Q
    |||||||||||| ||| | ||||||||||||| || || ||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  14234770 catttaacctaaacaaggcattctgtaactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcccaaaaattcattct 14234869  T
Q  113 taaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaa 211  Q
    | ||||||| | |||||||||||| |||| ||||||| |||||||| |||| | | |||||||||||||||||  |||||||| |||||||| || ||||    
T  14234870 t-aactatttcgggttcaatctcaatctataatctttcctaatcatcattatacatgttcaggcactcaaaaaaatctaaggttcaacttaaaggtcaaa 14234968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 15471191 - 15471391
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  |||||||||||||||| ||||| |||||||||||||| |  || |||||||| |||||||||||||||||||||||||||||||||||| |    
T  15471191 gcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcacgaggcgagggcctctactcgccatggcgagttcaggtgtaactctc 15471290  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaa 198  Q
     ||||| | |||||||||||||||||||||||||| | |||  ||||||| |||||||| |||| | | ||||||| |||||||||| |||||||| |||    
T  15471291 -aaaattcgttcttaaactattccaggttcaatcttaatctccaatctttcctaatcatcattatacatgttcagggactcaaaaacatctaaggttcaa 15471389  T
Q  199 ct 200  Q
    ||    
T  15471390 ct 15471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 1465249 - 1465047
Alignment:
Q  16 tttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattctta 114  Q
    |||||||||| ||| | ||||||||||||| || ||||||||||||  |||||||||||||||||| |||||||||| ||||| || |||| | ||||||    
T  1465249 tttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcaagttcaggtgcaactcacacaaattcgttctta 1465150  T
Q  115 aactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaa 212  Q
    || ||||||||||||||||||| |||| |||||||  ||||||| ||  |||| ||||||||||||||||||| |||||||| | |||||| || |||||    
T  1465149 aattattccaggttcaatctcaatctacaatctttcataatcatcatcataca-agttcaggcactcaaaaacatctaaggttcgacttaaaggtcaaaa 1465051  T
Q  213 ctac 216  Q
    ||||    
T  1465050 ctac 1465047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 17248109 - 17247947
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 131  Q
    ||||||||||||||| |||||||||||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| |||   ||||||||||||    
T  17248109 attctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaa 17248010  T
Q  132 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||| | ||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  17248009 tctcattctacattctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 17247947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 33 - 216
Target Start/End: Original strand, 42386710 - 42386894
Alignment:
Q  33 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaa-atccattcttaaactattccaggttcaa 131  Q
    |||||||| |||| ||||||||||| ||  |||||||||||||||||||||||||||| ||||||||||||  | ||||||| ||||||| |||||||||    
T  42386710 ttctgtaattgggcaactcgcgaggtgagagcctctactcgccatggcgagttcaggtataactcccaaaagtttcattctt-aactatttcaggttcaa 42386808  T
Q  132 tctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 216  Q
    || || |||| | ||||  |||||||||||||  ||| ||||| ||||||| ||||  ||||||| |||||||| || |||||||||    
T  42386809 tcacagtctaaagtcttgcctaatcattattatgcat-gttcatgcactcataaacaactaaggttcaacttaaaggtcaaaactac 42386894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 193
Target Start/End: Complemental strand, 53070520 - 53070360
Alignment:
Q  33 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 131  Q
    |||||||| |||| ||||||||||||||  ||||||||||||||||||||||||||||  | || ||||||| | ||||||| || || |||||||||||    
T  53070520 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaggt-cagcttccaaaaagttcattctt-aattaatccaggttcaa 53070423  T
Q  132 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  53070422 tctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 53070360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 193
Target Start/End: Complemental strand, 12934117 - 12933971
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 147  Q
    |||||||||||||  | |||| |||||||||||||||||||||  |  || ||||| | |||||| |||   |||||||||||||||||||||  |||||    
T  12934117 actcgcgaggcgagagtctctgctcgccatggcgagttcaggttcagttcacaaaatttcattctaaaatctttccaggttcaatctcattctctaatct 12934018  T
Q  148 tttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    || ||||||||||||| | | |||||||||||||||||| |||||||    
T  12934017 ttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 12933971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 16097596 - 16097782
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  |||||||||||| |||  |||| ||| ||||||| | || ||||||||||||  |||||||||| |||||||||||||||||  || || |    
T  16097596 gcgacaaagatcgcatttaacataaacaagacattttgtaactagttagctcgcgaggcgagagcctctactcaccatggcgagttcaggtccaattcac 16097695  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 185  Q
    |||||| |||||| |||   || ||||||||||||||||||  ||||||| ||||| ||||||| | | |||||| |||||||||||    
T  16097696 aaaaattcattctaaaatcttttcaggttcaatctcattctccaatctttcctaataattattagacatgttcagacactcaaaaac 16097782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 193
Target Start/End: Original strand, 32307983 - 32308128
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattcc-aggttcaatctcattctagaatc 146  Q
    |||||||||||||  |||||| |||||||||||||||||||||  |  |||||||| || ||||| ||| | |||| |||||||||||||||||  ||||    
T  32307983 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcccaaaattc-attct-aaagtcttcctaggttcaatctcattctccaatc 32308080  T
Q  147 ttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||| ||||||||||||| ||| |||||||||||||||| | |||||||    
T  32308081 tttcctaatcattattagatatgttcaggcactcaaaagcatctaagg 32308128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 204
Target Start/End: Complemental strand, 606049 - 605941
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 195  Q
    |||||||||||||| ||||||| ||||||||||||||||| |||||||  ||  ||||||||||||| | |  ||||||||||||||| | ||||||||     
T  606049 cccaaaaatccatttttaaacttttccaggttcaatctcaatctagaaaattgcctaatcattattatacacattcaggcactcaaaatcatctaaggtt 605950  T
Q  196 caacttaag 204  Q
    |||||||||    
T  605949 caacttaag 605941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 183
Target Start/End: Complemental strand, 40213535 - 40213392
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 140  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | |||||||| | ||||||  ||   |||||||||||||||||| ||    
T  40213535 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagattcccaaaagttcattctacaatctttccaggttcaatctcatcct 40213436  T
Q  141 agaatcttttctaatcattattacata-gttcaggcactcaaaa 183  Q
    | | ||||| ||||||||||||| | | ||||||||||||||||    
T  40213435 acattctttcctaatcattattagacatgttcaggcactcaaaa 40213392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 37251005 - 37250932
Alignment:
Q  16 tttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 89  Q
    ||||||||||||| |  ||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||    
T  37251005 tttaacctaacaaggtgttctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcagg 37250932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 49667890 - 49667754
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 147  Q
    |||||||||||||  |||||| |||||||||||||||||||||  |  || ||| | | |||||| |||   |||||||||||||||||||||  |||||    
T  49667890 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaatatttcattctaaaatctttccaggttcaatctcattctctaatct 49667791  T
Q  148 tttctaatcattattacata-gttcaggcactcaaaa 183  Q
    || ||||||||||||| | | |||||||| |||||||    
T  49667790 ttcctaatcattattagacatgttcaggcgctcaaaa 49667754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 193
Target Start/End: Original strand, 9513228 - 9513370
Alignment:
Q  53 cgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattctagaatcttttc 151  Q
    ||||||||  |||||| |||||||||| |||||||||| ||  || |||||||  |||||| |||   || ||||||||||||||||||  ||||||| |    
T  9513228 cgaggcgagagcctctgctcgccatggtgagttcaggtttagttcacaaaaatttcattctaaaatcttttcaggttcaatctcattctctaatctttcc 9513327  T
Q  152 taatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||||| | | |||||||||||||||| | |||||||    
T  9513328 taatcattattagacatgttcaggcactcaaaagcatctaagg 9513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 193
Target Start/End: Original strand, 9521203 - 9521345
Alignment:
Q  53 cgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattctagaatcttttc 151  Q
    ||||||||  |||||| |||||||||| |||||||||| ||  || |||||||  |||||| |||   || ||||||||||||||||||  ||||||| |    
T  9521203 cgaggcgagagcctctgctcgccatggtgagttcaggtttagttcacaaaaatttcattctaaaatcttttcaggttcaatctcattctctaatctttcc 9521302  T
Q  152 taatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||||| | | |||||||||||||||| | |||||||    
T  9521303 taatcattattagacatgttcaggcactcaaaagcatctaagg 9521345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 12171959 - 12171869
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||||| |||||||||||||||| ||| | ||||||||||| | ||  |||||||||||  |||||||||||||||||| |||||||||    
T  12171959 gcgacaagaatcgcatttaacctaaacaaggcattctgtaactagttagatcgcgaggcgagagcctctactcgccatggccagttcaggt 12171869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 14572873 - 14573037
Alignment:
Q  19 aacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaa-aatccattcttaaac 117  Q
    |||||||||| | | |||||  || ||| |||||||||||||  ||||||||||||||||||||||||||||   | | |||||   | |||||| |  |    
T  14572873 aacctaacaaggtactctgtttctaggtcactcgcgaggcgagagcctctactcgccatggcgagttcaggtcagatttccaaaggtttcattctaagtc 14572972  T
Q  118 tattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 182  Q
    | |||||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||    
T  14572973 t-ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaa 14573037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 205
Target Start/End: Original strand, 23275106 - 23275213
Alignment:
Q  99 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 196  Q
    |||||||||||| ||||||| | ||| ||||||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||| | |||||||| |    
T  23275106 caaaaatccatttttaaactttcccaagttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 23275204  T
Q  197 aacttaagg 205  Q
    |||||||||    
T  23275205 aacttaagg 23275213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 213
Target Start/End: Complemental strand, 23412929 - 23412814
Alignment:
Q  99 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 196  Q
    |||||||||||| ||||||| | |||||| |||||||| |||| || |||  ||||||||| |||  |||| ||||||||||||||| | |||||||| |    
T  23412929 caaaaatccatttttaaactttcccaggtccaatctcaatctaaaaacttgcctaatcatttttatacata-ttcaggcactcaaaatcatctaaggttc 23412831  T
Q  197 aacttaaggggcaaaac 213  Q
    |||||||||| ||||||    
T  23412830 aacttaagggacaaaac 23412814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 193
Target Start/End: Complemental strand, 25476199 - 25476046
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 140  Q
    |||||| |||||||||||||  ||||||||||| | ||||||||||||||   | ||| |||  | |||||| |||   |||||||||| ||||||||||    
T  25476199 ctgggtcactcgcgaggcgagagcctctactcgtcgtggcgagttcaggtcagattccaaaagtttcattctaaaatctttccaggttcgatctcattct 25476100  T
Q  141 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    | | |||||  |||||||||||| | | ||||||| |||||||||| |||||||    
T  25476099 acattctttcataatcattattagacatgttcaggtactcaaaaacatctaagg 25476046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 205
Target Start/End: Original strand, 43927543 - 43927652
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 195  Q
    |||||||||||||| ||||||| | |||||||||| |||| |||| || ||| |||||||||||||| | | |||||||||||||||| | ||||| ||     
T  43927543 cccaaaaatccatttttaaactttcccaggttcaaactcaatctaaaaacttgtctaatcattattatacatgttcaggcactcaaaatcatctaaagtt 43927642  T
Q  196 caacttaagg 205  Q
    | ||||||||    
T  43927643 cgacttaagg 43927652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 49389378 - 49389305
Alignment:
Q  121 tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  49389378 tccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 49389305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 185
Target Start/End: Complemental strand, 1644489 - 1644352
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattc-caggttcaatctcattctagaatc 146  Q
    |||||||||||||  |||||| |||||||||||||||||||||  |  || ||||| || ||||| ||| | ||| ||||||||||||||||||  ||||    
T  1644489 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaaaattc-attct-aaagtcttctcaggttcaatctcattctctaatc 1644392  T
Q  147 ttttctaatcattattacata-gttcaggcactcaaaaac 185  Q
    ||| ||||||||||| | | | ||||||||||||||||||    
T  1644391 tttcctaatcattatcagacatgttcaggcactcaaaaac 1644352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 211
Target Start/End: Original strand, 14501564 - 14501677
Alignment:
Q  99 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 196  Q
    |||||||||||| ||||||  | |||||| |||||||| |||| || |||  |||||||||||||  |||| ||||||||||||||| | |||||||| |    
T  14501564 caaaaatccatttttaaaccttcccaggtccaatctcaatctaaaaccttgcctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 14501662  T
Q  197 aacttaaggggcaaa 211  Q
    |||||||||| ||||    
T  14501663 aacttaagggacaaa 14501677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 193
Target Start/End: Complemental strand, 11424569 - 11424424
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattctagaatct 147  Q
    ||||||||||||  ||||||||||||| ||||||||||||||   | | | |||| |  |||||| || || |||||||||||||||||||||| | | |    
T  11424569 ctcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagagttcaaaaagtttcattctaaatct-ttccaggttcaatctcattctacattat 11424471  T
Q  148 tttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    || ||||||||||||| | | |||||||||||||||| | |||||||    
T  11424470 ttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 11424424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 14179708 - 14179789
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||| |||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  14179708 ttccaagttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 14179789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 12378359 - 12378457
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 194  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || | |  |||||||||||  |||||| ||||||||||||||| | ||||||||    
T  12378359 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacatgcctaatcattattgtacata-ttcaggcactcaaaatcatctaaggt 12378457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 211
Target Start/End: Original strand, 45797608 - 45797721
Alignment:
Q  99 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 196  Q
    |||||||||||| ||||||  | |||||| |||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||| | ||||| || |    
T  45797608 caaaaatccatttttaaaccttcccaggtccaatctcaatctaaaaacttacctaatcattattatacata-ttcaggcactcaaaatcatctaaagttc 45797706  T
Q  197 aacttaaggggcaaa 211  Q
    |||||||||| ||||    
T  45797707 aacttaagggacaaa 45797721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 18438920 - 18438994
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||||||||||||||||||| || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  18438920 ttccaggttcaatctcattttacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 18438994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 20698183 - 20698101
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||| ||||||||| | |||||||| |||||    
T  20698183 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcagacactcaaaagcatctaaggttcaact 20698101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 26687193 - 26687347
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 139  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||||| || |  ||||||  ||   |||||||||||||||||| |    
T  26687193 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcc 26687292  T
Q  140 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    || | ||||| ||||||||||||| | | ||| |||||||||||| | |||||||    
T  26687293 tacattctttcctaatcattattagacatgtttaggcactcaaaagcatctaagg 26687347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 14973161 - 14973314
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 140  Q
    |||||| ||| |||||||||  |||||| |||||| ||||||||||||||   | | |||||| | | |||| |||   || | |||| |||||||||||    
T  14973161 ctgggtcacttgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagttctttctaaaatcttttctggtttaatctcattct 14973260  T
Q  141 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  14973261 acattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 14973314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 37250869 - 37250804
Alignment:
Q  98 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 163  Q
    ||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||||    
T  37250869 ccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatta 37250804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 16104168 - 16104240
Alignment:
Q  122 ccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||| ||||||||  ||||||| ||||||||||||| | | ||||||||||||| |||| |||||||    
T  16104168 ccaggttcaacctcattctccaatctttcctaatcattattagacatgttcaggcactcagaaacatctaagg 16104240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 14576568 - 14576505
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 182  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| | | |||||||||||||||    
T  14576568 ttccaggttcaatgtcattctacattcttttctaatcataattagacatgttcaggcactcaaa 14576505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 17488243 - 17488306
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 182  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||    
T  17488243 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaa 17488306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 17499725 - 17499788
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 182  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||    
T  17499725 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaa 17499788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 22110033 - 22109926
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 195  Q
    |||||||||||||| | ||||  |  ||||||||||||||  ||| || |||  ||||||||||||| | | |||||||||||||||||| ||||| ||     
T  22110033 cccaaaaatccattttcaaacactcacaggttcaatctcaaactaaaaacttgcctaatcattattatacatgttcaggcactcaaaaacatctaaagtt 22109934  T
Q  196 caacttaa 203  Q
    ||||||||    
T  22109933 caacttaa 22109926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 87
Target Start/End: Complemental strand, 606173 - 606135
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagttca 87  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  606173 ctcgcgaggcgaggacctctactcgccatggcgagttca 606135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 12340138 - 12340219
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    |||||||||||||||||| ||| | ||||| ||||||| ||||| | | |||||||||||||||  | |||||||| |||||    
T  12340138 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaact 12340219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 13210133 - 13210096
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagttc 86  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  13210133 ctcgcgaggcgagagcctctactcgccatggcgagttc 13210096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 20698251 - 20698202
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  20698251 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 20698202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 13442660 - 13442724
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 183  Q
    |||||||||||||||||| ||| | | ||| ||||||||||||| | | ||||||||||||||||    
T  13442660 ttccaggttcaatctcatcctacattttttcctaatcattattagacatgttcaggcactcaaaa 13442724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 22110156 - 22110116
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagttcagg 89  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  22110156 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 22110116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 23083176 - 23083132
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagtt 85  Q
    |||||| | |||||||||||  |||||||||||||||||||||||    
T  23083176 ctgggtcattcgcgaggcgagagcctctactcgccatggcgagtt 23083132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 6879 - 7092
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  |||||||||||||||| ||| | ||||| ||||||| || || ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  6879 gcgacaaagatcgcatttaacctaaacaatgcattctataactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggtgtaattccc 6978  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaa 198  Q
    ||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||||| |||| | | ||| |||||||||||||| |||||||| |||    
T  6979 aaaaatccattcttaaactattccaggttcaatcttaatctataatctttcctaatcatcattatacatgtttaggcactcaaaaacatctaaggttcaa 7078  T
Q  199 cttaaggggcaaaa 212  Q
    ||||| || |||||    
T  7079 cttaaaggtcaaaa 7092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 14259 - 14472
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  |||||||||||||||| ||| | ||||| ||||||| || || ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  14259 gcgacaaagatcgcatttaacctaaacaatgcattctataactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggtgtaattccc 14358  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaa 198  Q
    ||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||||| |||| | | ||| |||||||||||||| |||||||| |||    
T  14359 aaaaatccattcttaaactattccaggttcaatcttaatctataatctttcctaatcatcattatacatgtttaggcactcaaaaacatctaaggttcaa 14458  T
Q  199 cttaaggggcaaaa 212  Q
    ||||| || |||||    
T  14459 cttaaaggtcaaaa 14472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 13220 - 13407
Alignment:
Q  14 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattctt 113  Q
    ||||||||||||||| | ||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  13220 catttaacctaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcacaaaaattcattctt 13319  T
Q  114 aaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||||| | |||  ||||||| |||||||| |||| | | |||||||||||||||||| |||||||| |||||    
T  13320 aaactattccaggttcaatcttaatctccaatctttcctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaact 13407  T

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Target: chr4 (Bit Score: 108; Significance: 2e-54; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 15099616 - 15099833
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  ||||| ||||||||||  |||| ||||||||||||| || ||||||||||||  ||||||||||||||||||||||||||||| ||||| |    
T  15099616 gcgacaaagatcgcttttaacctaaacaagacattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcac 15099715  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcca 197  Q
    |||||| |||||||||||||||||||||||||||||| |||| ||||||| |||||||| ||  |||| ||||||||||||||||||| |||||||| |     
T  15099716 aaaaattcattcttaaactattccaggttcaatctcaatctacaatctttcctaatcatcatcataca-agttcaggcactcaaaaacatctaaggttcg 15099814  T
Q  198 acttaaggggcaaaactac 216  Q
    |||||| || |||||||||    
T  15099815 acttaaaggtcaaaactac 15099833  T

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Target: chr4; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 39706142 - 39705930
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  |||||||||||||||| ||||| |||||||||||||| |  ||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  39706142 gcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctc 39706043  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaa 198  Q
     ||||| | |||||||||||||||||||||||||| | |||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||| |||    
T  39706042 -aaaattcgttcttaaactattccaggttcaatcttaatcttcaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaa 39705944  T
Q  199 cttaaggggcaaaa 212  Q
    ||||| || |||||    
T  39705943 cttaaaggtcaaaa 39705930  T

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Target: chr4; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 15190583 - 15190787
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  ||||| |||||||||| ||| | ||||||||||||| || ||||||||||||  |||||||||||||||||||||| ||| |||||| |||    
T  15190583 gcgacaaagatcgcttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagtacagatgtaacgccc 15190682  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaa 198  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||| |||| | | |||||||||||||||||| |||||||| | |    
T  15190683 aaaaatccattcttaaactattccaggttaaatctcaatctagaaccttttctaatcataattagacatgttcaggcactcaaaaacatctaaggttcga 15190782  T
Q  199 cttaa 203  Q
    |||||    
T  15190783 cttaa 15190787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 32 - 239
Target Start/End: Complemental strand, 52243016 - 52242811
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 131  Q
    |||||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  52243016 attctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaacaatgcattcttaaactattccaggttcaa 52242917  T
Q  132 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtc 230  Q
    |||||||||||||||||| || |||||||||| | | |||||||||||| ||| | |||||   ||||||||| |  ||||   ||||||||| |||||     
T  52242916 tctcattctagaatctttcctgatcattattatacatgttcaggcactcgaaatcatctaaataccaacttaaagatcaaa---actacgaaatcatgtt 52242820  T
Q  231 gactctctg 239  Q
    |||||||||    
T  52242819 gactctctg 52242811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 32 - 216
Target Start/End: Complemental strand, 15464752 - 15464567
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 131  Q
    |||||||||||||| ||||||||||||||  |||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  15464752 attctgtaactgggcaactcgcgaggcgagagcctctactcgctatggtgagttcaggtgtaacacccaaaaatccattcttaaactatttcaggttcaa 15464653  T
Q  132 tctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 216  Q
    ||||| |||| ||||||| |||||||||||  |||||| ||||||||||||||| | |||||    ||||||||||| |||||||||    
T  15464652 tctcaatctaaaatctttcctaatcattattatacata-ttcaggcactcaaaatcatctaaatatcaacttaagggtcaaaactac 15464567  T

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Target: chr4; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 63 - 216
Target Start/End: Complemental strand, 43198380 - 43198226
Alignment:
Q  63 gcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatt 162  Q
    |||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||    
T  43198380 gcctctactcgctatggtgagttcaggtgtaactcccaaaaatcaattcttaaactattccatgttcaatctcaatctaaaatctttcctaatcattatt 43198281  T
Q  163 acata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 216  Q
    ||| | |||||||||||||||||| ||||||||  |||||||||| |||||||||    
T  43198280 acacatgttcaggcactcaaaaacatctaaggtttaacttaagggtcaaaactac 43198226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 49 - 203
Target Start/End: Original strand, 13844854 - 13845009
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 148  Q
    ||||||||||||  |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||   |||||||||||    
T  13844854 ctcgcgaggcgagagcctctactcgccatggcaagtacaggtgtaactcccaaaaatccattcttaaactattccaggttaaatcttgatctagaatctt 13844953  T
Q  149 ttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 203  Q
    |||||||||| |||| | | |||||| ||||||||||| |||||||| ||||||||    
T  13844954 ttctaatcataattagacatgttcagacactcaaaaacatctaaggttcaacttaa 13845009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 8846640 - 8846834
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactc-c 98  Q
    |||||||  |||||||||||| |||  |||| ||||||||||| | || ||||||||||||  ||||||||||||||||||||||| ||||| ||||| |    
T  8846640 gcgacaaagatcgcatttaacataaacaagacattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttaaggtgcaactcac 8846739  T
Q  99 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaag 192  Q
     |||||| |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||||| |||||||||| ||||||    
T  8846740 aaaaaattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggtactcaaaaacatctaag 8846834  T

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Target: chr4; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 185
Target Start/End: Complemental strand, 44928746 - 44928592
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 131  Q
    ||||||||||||||| |||||||||||||  |||||| ||||||||||||||||| |||   | |||||||  | |||||| |||   ||||||||||||    
T  44928746 attctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttctggtcagattcccaaagtttcattctaaaatctttccaggttcaa 44928647  T
Q  132 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 185  Q
    |||||||||| | ||||| ||||||||||||| ||| ||||||||||||||||||    
T  44928646 tctcattctacattctttcctaatcattattagatatgttcaggcactcaaaaac 44928592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 15868391 - 15868273
Alignment:
Q  99 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 196  Q
    |||||||| ||| ||||||| | ||||||||||||||| |||| || |||| |||||||||||  |||||| ||||||||||||||| | |||||||| |    
T  15868391 caaaaatctatttttaaactttcccaggttcaatctcaatctaaaaactttcctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 15868293  T
Q  197 aacttaaggggcaaaactac 216  Q
    |||||||||| |||||||||    
T  15868292 aacttaagggacaaaactac 15868273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 193
Target Start/End: Original strand, 12774313 - 12774458
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactat-tccaggttcaatctcattctagaatc 146  Q
    |||||||||||||  |||||| |||||||||||||||||||||  |  || ||||| || ||||| ||  | | ||||||||||||||||||||  ||||    
T  12774313 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaaaattc-attct-aacgtctctccaggttcaatctcattctccaatc 12774410  T
Q  147 ttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||||||||||||||||| | | |||||||||||||||||| |||||||    
T  12774411 ttttctaatcattattagacatgttcaggcactcaaaaacatctaagg 12774458  T

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Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 193
Target Start/End: Complemental strand, 21815124 - 21814964
Alignment:
Q  33 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 131  Q
    |||||||| |||| ||||||||||||||  ||||||||||||||||||||||||| ||  | || ||||||| | ||||||| || || ||||||||||     
T  21815124 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaagt-cagcttccaaaaagttcattctt-aattaatccaggttcat 21815027  T
Q  132 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    | |||||||| | ||||| ||||||||||||| | | |||||| ||||||||| | |||||||    
T  21815026 tatcattctaaattctttcctaatcattattaaacatgttcagacactcaaaagcatctaagg 21814964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 193
Target Start/End: Complemental strand, 21815453 - 21815293
Alignment:
Q  33 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 131  Q
    |||||||| |||| ||||||||||||||  ||||||||||||||||||||||||||||  | || ||||||| | ||||||| || || ||||||||||     
T  21815453 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaggt-cagcttccaaaaagttcattctt-aattaatccaggttcat 21815356  T
Q  132 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    | |||||||| | | ||| ||||||||||||| | | |||||| ||||||||| | |||||||    
T  21815355 tatcattctaaattatttcctaatcattattaaacatgttcagacactcaaaagcatctaagg 21815293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 193
Target Start/End: Complemental strand, 21818546 - 21818386
Alignment:
Q  33 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 131  Q
    |||||||| |||| ||||||||||||||  ||||||||||||||||||||||||| ||  | || ||||||| | ||||||| || || ||||||||||     
T  21818546 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaagt-cagcttccaaaaagttcattctt-aattaatccaggttcat 21818449  T
Q  132 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    | |||||||| | ||||| ||||||||||||| | | |||||| ||||||||| | |||||||    
T  21818448 tatcattctaaattctttcctaatcattattaaacatgttcagacactcaaaagcatctaagg 21818386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 211
Target Start/End: Original strand, 32851816 - 32851929
Alignment:
Q  99 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 196  Q
    |||||||||||| ||||||  | |||||| |||||||| |||| || ||| ||||||||||||  |||||| ||||||||||||||| | |||||||| |    
T  32851816 caaaaatccatttttaaaccttcccaggtccaatctcaatctaaaaacttgtctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 32851914  T
Q  197 aacttaaggggcaaa 211  Q
    |||||||||| ||||    
T  32851915 aacttaagggacaaa 32851929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 13532 - 13415
Alignment:
Q  97 cccaaaaatccattctt-aaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggt 194  Q
    |||||||||||||| || ||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||||| | ||||| ||    
T  13532 cccaaaaatccattttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacttgttcaggcactcaaaatcatctaaagt 13433  T
Q  195 ccaacttaaggggcaaaa 212  Q
     ||||||||||| |||||    
T  13432 tcaacttaagggtcaaaa 13415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 16597031 - 16597106
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 194  Q
    |||||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | ||||||||    
T  16597031 ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggt 16597106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 3097017 - 3097093
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 194  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||| ||||| ||||||||    
T  3097017 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcgaaaacatctaaggt 3097093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 15091203 - 15091326
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaa-atccattcttaaactattccaggttcaatctcattc 139  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | | ||||||  | |||||| |||   ||||||||||||||||||||    
T  15091203 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatccttccaggttcaatctcattc 15091302  T
Q  140 tagaatcttttctaatcattatta 163  Q
    || | ||||| ||||||| |||||    
T  15091303 tacattctttcctaatcaatatta 15091326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 12287891 - 12287825
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 163  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||||    
T  12287891 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatta 12287825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 14038955 - 14039109
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 139  Q
    |||||| |||||||||||||  |||||| |||||| |||||||||| |||   | | |||||| |  |||||| |||   ||| ||||||||||||||||    
T  14038955 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttctggtcagatttccaaaagtttcattctaaaatctttctaggttcaatctcattc 14039054  T
Q  140 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    || | ||||| | ||||||||||| | | |||||||||||||||| | |||||||    
T  14039055 tacattctttccaaatcattattagacatgttcaggcactcaaaagcatctaagg 14039109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 44102508 - 44102566
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    ||||||||| | ||| |||||||||||||  |||||| |||||||||||||||||||||    
T  44102508 attctgtaaataggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 44102566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 53081854 - 53081789
Alignment:
Q  98 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 163  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||| || |||   ||||||||||||    
T  53081854 ccaaaaatccatttttaaacttttccaggttcaatctcaatctaaaaacttgcttaatcattatta 53081789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 13656 - 13616
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcag 88  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  13656 actcgcgaggcgagggcctctactcgctatggcgagttcag 13616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 12903131 - 12903195
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 182  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||    
T  12903131 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaa 12903195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 14053049 - 14052967
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtccaact 200  Q
    |||||| |||||||||||| ||| | ||||| ||||||||||||  ||||| ||||||||||||||| | |||||||| |||||    
T  14053049 attccaagttcaatctcatcctacattctttcctaatcattattagacata-ttcaggcactcaaaagcatctaaggttcaact 14052967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 7089185 - 7089232
Alignment:
Q  43 gggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||| |||||||||||||  |||||| |||||||||||||||||||||    
T  7089185 gggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 7089232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 16239728 - 16239653
Alignment:
Q  120 ttccaggttcaatctcattctaga-atcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||||||||||||||| |  ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  16239728 ttccaggttcaatctcattctacatttctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 16239653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 17047885 - 17047838
Alignment:
Q  43 gggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||| |||||||||||||  |||||| |||||||||||||||||||||    
T  17047885 gggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 17047838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 6190819 - 6190893
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||||||||||| ||| | ||| | ||||||||||||| | | |||||||||||||||| | |||||||    
T  6190819 ttccaggttcaatctcatcctacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 6190893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 7089251 - 7089313
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 180  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||    
T  7089251 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactca 7089313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 3096949 - 3096998
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  3096949 ctgggtcactcgcgaggcgagagcctctgctcgccttggcgagttcaggt 3096998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 7799003 - 7799052
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  7799003 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 7799052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 12903063 - 12903112
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| ||||||||||||   ||||||||||||| ||||||||||||||    
T  12903063 ctgggtcactcgcgaggcgggagcctctactcgccgtggcgagttcaggt 12903112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 15552199 - 15552280
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    |||||||| ||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | | |||||| |||||    
T  15552199 ttccaggtccaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatataaggttcaact 15552280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 24029127 - 24029208
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    |||||||||||||||||| ||| | |||||  |||||| ||||| | | ||||||||||||||| || |||||||| |||||    
T  24029127 ttccaggttcaatctcatcctacattctttcataatcaatattagacatgttcaggcactcaaagacatctaaggttcaact 24029208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 43590 - 43438
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 148  Q
    ||||||||||||  ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43590 ctcgcgaggcgagagcctctactcgtcatggcgagtacaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcaatctagaatctt 43491  T
Q  149 ttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    |||||||||| |||| | | |||||||||||||||||| |||||||| |||||    
T  43490 ttctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaact 43438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 47510 - 47358
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 148  Q
    ||||||||||||  ||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  47510 ctcgcgaggcgagagcctctactcgtcatggctagtacaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcaatctagaatctt 47411  T
Q  149 ttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    |||||||||| |||| | | |||||||||||||||||| |||||||| |||||    
T  47410 ttctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaact 47358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 15653 - 15481
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 131  Q
    ||||||||||||| || |||||||||||| |||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  15653 attctgtaactggttagctcgcgaggcgagggcctctactcgccatggcgagttcatgtgtaattccgaaaaatccattcttaaactattccaggttcaa 15554  T
Q  132 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 203  Q
    ||||| |||| ||||||| |||||||| |||| | | ||| |||||||||||||| |||||||| ||||||||    
T  15553 tctcaatctataatctttcctaatcatcattatacatgtttaggcactcaaaaacatctaaggttcaacttaa 15481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 10 - 216
Target Start/End: Original strand, 39834107 - 39834315
Alignment:
Q  10 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 108  Q
    |||||||||||| ||| ||| | ||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||||||| ||||| |||| || ||    
T  39834107 atcgcatttaacttaaacaaggtattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacaaagattca 39834206  T
Q  109 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaaggg 206  Q
    |||||||||||||||||||||||||||| |||| ||||||| |||||||||||  |||| |||| |||||||||||||| |||||||| | |||||| ||    
T  39834207 ttcttaaactattccaggttcaatctcaatctacaatctttcctaatcattatcataca-agtttaggcactcaaaaacatctaaggttcgacttaaagg 39834305  T
Q  207 gcaaaactac 216  Q
     |||||||||    
T  39834306 tcaaaactac 39834315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 10 - 212
Target Start/End: Original strand, 6520644 - 6520847
Alignment:
Q  10 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 109  Q
    ||||||||||||||||||||| ||||||||| |||| |  | ||||||||| ||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  6520644 atcgcatttaacctaacaaagcattctgtaattgggcagtttgcgaggcgagggcctctactcgccatggcgaattcaggtctaactctcaaaaatccat 6520743  T
Q  110 tcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggc 208  Q
    |||||||||||| |||||||| ||| | |||  ||||||| ||||| ||||||| | | |||||| ||||||||||| |||||||| |||||||| || |    
T  6520744 tcttaaactatttcaggttcagtcttaatctccaatctttcctaattattattagacatgttcagacactcaaaaacatctaaggttcaacttaaaggtc 6520843  T
Q  209 aaaa 212  Q
    ||||    
T  6520844 aaaa 6520847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 212
Target Start/End: Complemental strand, 38855090 - 38854893
Alignment:
Q  16 tttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattctta 114  Q
    |||||||||| ||| | |||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||| | ||||||    
T  38855090 tttaacctaagcaaggcattctgtaactgggcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctc-aaaattcgttctta 38854992  T
Q  115 aactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaa 212  Q
    |||||||||||||| ||||| | |||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||| |||||||| || |||||    
T  38854991 aactattccaggttaaatcttaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaaa 38854893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 10 - 125
Target Start/End: Original strand, 21285874 - 21285989
Alignment:
Q  10 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 109  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||    
T  21285874 atcgcatttaacctaacaaagcattctgtaactgggcaacttgcgaggcgagggcctctactcgccatagcgagttcaggtgtaactcccaaaaattcat 21285973  T
Q  110 tcttaaactattccag 125  Q
    ||||||||||||||||    
T  21285974 tcttaaactattccag 21285989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 21673971 - 21674157
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  |||||||||| ||||| ||| | ||||||||||  |  || ||||||||||| |||||||||||||||||||||||||||||| ||||| |    
T  21673971 gcgacaaagatcgcatttatcctaaacaaggcattctgtaacaagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcac 21674070  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 185  Q
    ||| || |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||||||||||||||||    
T  21674071 aaatattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaac 21674157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 180
Target Start/End: Complemental strand, 19801234 - 19801101
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 147  Q
    ||||||||||||| | ||||||||||||||||||||||||||| ||||||||| || | | |||||||||||||||||||||||||| |||||  | |||    
T  19801234 actcgcgaggcgaggacctctactcgccatggcgagttcaggtataactcccacaagttcgttcttaaactattccaggttcaatcttattctctagtct 19801135  T
Q  148 tttctaatcattattacata-gttcaggcactca 180  Q
    || ||||||||||||| | | |||||||||||||    
T  19801134 ttcctaatcattattagacatgttcaggcactca 19801101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 23760694 - 23760509
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca 100  Q
    |||||||  |||||||||| |||||||| | ||| ||||||| |  || ||||||||||| |||||||||||||| |||| ||||||||| |||||||||    
T  23760694 gcgacaaagatcgcatttatcctaacaaggcattttgtaactagtcaattcgcgaggcgagggcctctactcgccttggcaagttcaggtataactccca 23760595  T
Q  101 aaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 185  Q
     || | | |||||||||||||||||||||||||||| | |  ||| ||| ||||||||||||| | | ||||||| ||||||||||    
T  23760594 caagttcgttcttaaactattccaggttcaatctcaatatccaatatttcctaatcattattagacatgttcaggaactcaaaaac 23760509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 41598482 - 41598644
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 131  Q
    ||||||||||| ||| |||||||||||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| |||   ||||||||||||    
T  41598482 attctgtaactaggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaa 41598581  T
Q  132 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||| | |||||  |||||||||||| | | |||||||||||||||| | |||||||    
T  41598582 tctcattctacattctttcataatcattattagacatgttcaggcactcaaaagcatctaagg 41598644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 26355553 - 26355367
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  |||||||||||| ||| ||| | ||||||||||| | || |||| |||||||  |||||||||||||||||| |||||||||  || || |    
T  26355553 gcgacaaagatcgcatttaacataaacaaggcattctgtaactagttagctcgtgaggcgagagcctctactcgccatggcaagttcaggtacaattcac 26355454  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 185  Q
    |||||| |||||| ||    ||||||||||||||||| |||  ||||| | ||||||||||||| | | ||||||||||||||||||    
T  26355453 aaaaattcattctaaagtctttccaggttcaatctcaatcttcaatctctcctaatcattattagacatgttcaggcactcaaaaac 26355367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 206
Target Start/End: Complemental strand, 13507765 - 13507657
Alignment:
Q  99 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 196  Q
    |||||||||||| ||||||| | ||||||||| ||||| |||| || ||| ||||||||||||  |||||| ||||||||||||||| | |||||||| |    
T  13507765 caaaaatccatttttaaactttcccaggttcagtctcaatctaaaaacttgtctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 13507667  T
Q  197 aacttaaggg 206  Q
    ||||||||||    
T  13507666 aacttaaggg 13507657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 206
Target Start/End: Complemental strand, 13597297 - 13597189
Alignment:
Q  99 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 196  Q
    |||||||||||| ||||||| | ||||||||| ||||| |||| || ||| ||||||||||||  |||||| ||||||||||||||| | |||||||| |    
T  13597297 caaaaatccatttttaaactttcccaggttcagtctcaatctaaaaacttgtctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 13597199  T
Q  197 aacttaaggg 206  Q
    ||||||||||    
T  13597198 aacttaaggg 13597189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 216
Target Start/End: Original strand, 20499024 - 20499143
Alignment:
Q  98 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcc 196  Q
    ||||||||||||| ||||||| |  |||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||||| | ||||| || |    
T  20499024 ccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttacctaatcattattatacatgttcaggcactcaaaatcatctaaagttc 20499123  T
Q  197 aacttaaggggcaaaactac 216  Q
    |||| ||||| |||||||||    
T  20499124 aactcaagggtcaaaactac 20499143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 22875372 - 22875494
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 140  Q
    |||||| |||||||||||||  |||||| |||| ||||||||||||||||   | |||||||  | |||||| |||   |||||||||||| ||| ||||    
T  22875372 ctgggtcactcgcgaggcgagagcctctgctcgtcatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaacctcgttct 22875471  T
Q  141 agaatcttttctaatcattatta 163  Q
    | ||||||| |||||||||||||    
T  22875472 acaatctttcctaatcattatta 22875494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 200
Target Start/End: Original strand, 20536514 - 20536675
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatccattcttaaactattccaggttcaatctcattc 139  Q
    |||||| |||||||||||||  ||||||||||||| ||||||||||||||   | ||||| ||  | ||||||  ||   |||||||||||||||||| |    
T  20536514 ctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccataagtttcattctacaatctttccaggttcaatctcatcc 20536613  T
Q  140 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    || | ||||| ||||||||||| | | | |||||||||||||||| | |||||||| |||||    
T  20536614 tacattctttcctaatcattatcagacatgttcaggcactcaaaagcatctaaggttcaact 20536675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 21491382 - 21491462
Alignment:
Q  124 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 203  Q
    |||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| ||||||||    
T  21491382 aggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaacttaa 21491462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 193
Target Start/End: Original strand, 23406665 - 23406841
Alignment:
Q  19 aacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatccattcttaaac 117  Q
    |||||||||| | | |||||  |||||| |||||||||||||  ||||||||||||| ||||||||||||||   | ||||| ||  | ||||||  ||     
T  23406665 aacctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaat 23406764  T
Q  118 tattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
      |||||||| ||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  23406765 ctttccaggtccaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 23406841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 5866009 - 5865931
Alignment:
Q  123 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  5866009 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 5865931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 6759563 - 6759717
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 139  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | | |||||| |  |||||| |||   ||||| ||||||||||||||    
T  6759563 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatatttccaagttcaatctcattc 6759662  T
Q  140 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    || | ||||| ||||||||||||| | | ||||| |||||||||| | |||||||    
T  6759663 tacattctttcctaatcattattagacatgttcaagcactcaaaagcatctaagg 6759717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 17141302 - 17141380
Alignment:
Q  123 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  17141302 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 17141380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 194
Target Start/End: Complemental strand, 45130767 - 45130691
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 194  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | ||||||||    
T  45130767 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggt 45130691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 205
Target Start/End: Complemental strand, 17266674 - 17266565
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 194  Q
    |||||||||||||| ||||||| |   ||||||||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||||| ||||| ||    
T  17266674 cccaaaaatccatttttaaactttcgtaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaaacatctaaagt 17266576  T
Q  195 ccaacttaagg 205  Q
     | ||||||||    
T  17266575 tcgacttaagg 17266565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 18878972 - 18878898
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  18878972 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 18878898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 205
Target Start/End: Complemental strand, 983084 - 982975
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 195  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||| || |||| ||||||| || || | | |||||| ||||||||| | ||||| ||     
T  983084 cccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaactttcctaatcactaatatacatgttcagacactcaaaatcatctaaagtt 982985  T
Q  196 caacttaagg 205  Q
    ||||||||||    
T  982984 caacttaagg 982975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 183
Target Start/End: Complemental strand, 17439187 - 17439100
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaa 183  Q
    |||||||||||||| ||||||| | |||||||||||| || |||| || |||  |||||||||||  |||||| |||||||||||||||    
T  17439187 cccaaaaatccatttttaaactttcccaggttcaatcccaatctaaaaacttgcctaatcattattgtacata-ttcaggcactcaaaa 17439100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 21286656 - 21286724
Alignment:
Q  168 gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtcgactctctg 239  Q
    ||||||||||| |||||| |||||||| ||||||||||| ||||   ||||||||| ||||| |||||||||    
T  21286656 gttcaggcacttaaaaacatctaaggttcaacttaagggtcaaa---actacgaaatcatgttgactctctg 21286724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 21918745 - 21918664
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    |||||||||||||||| | ||| | ||||||||||||||||||| | | |||||||||||| ||| | |||||||| |||||    
T  21918745 ttccaggttcaatctcttcctacattcttttctaatcattattagacatgttcaggcactccaaagcatctaaggttcaact 21918664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 183
Target Start/End: Original strand, 24353463 - 24353550
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaa 183  Q
    ||||||||||||||  |||||| | ||||||||||||||| |||| || |||  |||||||||||  |||||| |||||||||||||||    
T  24353463 cccaaaaatccatttataaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaa 24353550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 194
Target Start/End: Complemental strand, 21415049 - 21414887
Alignment:
Q  33 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaat 132  Q
    |||||||| |||  ||||||||||||||  | |||||||||||||||||||||  |||  ||  | ||  | |||||| | || ||| |||  |||||||    
T  21415049 ttctgtaattggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattttgaagctaatccgagttcaat 21414950  T
Q  133 ctcattctagaatcttttctaatcatta--ttacatagttcaggcactcaaaaacctctaaggt 194  Q
    ||||||||| ||||||| ||||||||||   | |||  ||||||||||||||||| ||||||||    
T  21414949 ctcattctacaatctttcctaatcattagtgtgcat-cttcaggcactcaaaaacatctaaggt 21414887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 7373135 - 7373209
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||||||||||||| |||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  7373135 ttccaggttcaatttcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 7373209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 18818145 - 18818071
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||||||||||| ||| | | ||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  18818145 ttccaggttcaatctcatcctacattttttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 18818071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 21918808 - 21918766
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||||||||||  |||||| |||||||||||||||||||||    
T  21918808 actcgcgaggcgagagcctctgctcgccatggcgagttcaggt 21918766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 193
Target Start/End: Original strand, 22627125 - 22627195
Alignment:
Q  124 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  22627125 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22627195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 31971629 - 31971711
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| ||| |  |||| ||||||||||||| | | |||||||||| ||||| | |||||||| |||||    
T  31971629 attccaggttcaatctcatcctacatcctttcctaatcattattagacatgttcaggcacacaaaagcatctaaggttcaact 31971711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 18818224 - 18818175
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  18818224 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 18818175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 21255605 - 21255686
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||  ||||||||||| | |||||||| |||||    
T  21255605 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgtttgggcactcaaaagcatctaaggttcaact 21255686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 183
Target Start/End: Original strand, 37116787 - 37116874
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaa 183  Q
    |||||||||||||| ||| ||| |  |||||||||||||| |||| || |||  |||||||||||  |||||| |||||||||||||||    
T  37116787 cccaaaaatccatttttatactttctcaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaa 37116874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 25362887 - 25362843
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattatta 163  Q
    ||||||||||||||||||| ||| | ||||| |||||||||||||    
T  25362887 attccaggttcaatctcatcctacattctttcctaatcattatta 25362843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 37116664 - 37116704
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagttcagg 89  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  37116664 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 37116704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 32 - 216
Target Start/End: Complemental strand, 23708441 - 23708257
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 131  Q
    |||||||||||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  23708441 attctgtaactgggtaactcgcaaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaaaaatccattcttaaactattcc-gattcaa 23708343  T
Q  132 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 216  Q
    ||||| ||||  | |||| |||||||||| |||||| |||||| ||||||||||| ||||| |  ||||| ||||| |||||||||    
T  23708342 tctcaatctacgaactttcctaatcattaatacatatgttcagacactcaaaaacatctaaagatcaactcaagggtcaaaactac 23708257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 32 - 200
Target Start/End: Original strand, 25176140 - 25176309
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 131  Q
    |||||||||||| | |  ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||||||||||    
T  25176140 attctgtaactgcgcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtctaactctcaaaaatctgttcttaaactattccaggttcaa 25176239  T
Q  132 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||| |||  || |||| |||||||| |||| | | |||||||||||||||||| |||||||| |||||    
T  25176240 tctcaatctccaacctttcctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaact 25176309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 203
Target Start/End: Original strand, 23076726 - 23076910
Alignment:
Q  19 aacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaact 118  Q
    |||||||||| | | |||||  ||||||||||||||||||||  ||||||||||||| ||||||||||||||   | | |||||  | |||||| || ||    
T  23076726 aacctaacaaggcactctgtttctgggtaactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaattccaaagtttcattctaaatct 23076825  T
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 203  Q
     |||||||| ||||||||| ||| | ||||| ||||| ||||||| | | |||||||||||||||| | |||||||  ||||||||    
T  23076826 -ttccaggtccaatctcatcctacattctttcctaattattattagacatgttcaggcactcaaaagcatctaaggatcaacttaa 23076910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 193
Target Start/End: Original strand, 23660307 - 23660482
Alignment:
Q  19 aacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaact 118  Q
    |||||||||| | | |||||  |||||| |||| ||||||||  |||||| |||||| ||||||||||||||   | ||| |||  | |||||| |||      
T  23660307 aacctaacaaggcactctgtttctgggtcactcacgaggcgagagcctctgctcgccgtggcgagttcaggtcagattccaaaagtttcattctaaaatc 23660406  T
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
     |||||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  23660407 tttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 23660482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 193
Target Start/End: Complemental strand, 298629 - 298476
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 139  Q
    |||||| |||||||||||||  ||||||||||||| ||||||||||||||   | ||||| || |  |||||| || || |||||||||||||||||| |    
T  298629 ctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctaaatct-ttccaggttcaatctcatcc 298531  T
Q  140 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  298530 tatattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 298476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 23207559 - 23207634
Alignment:
Q  14 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 89  Q
    ||||||||||||||| |  ||||||||||||| ||||||| ||||||  |||||||||||| ||||||||||||||    
T  23207559 catttaacctaacaaggtgttctgtaactgggcaactcgcaaggcgagagcctctactcgctatggcgagttcagg 23207634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 183
Target Start/End: Original strand, 28406297 - 28406429
Alignment:
Q  52 gcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttc 151  Q
    |||||||||  ||||||||||||||||||||||||||||  |  || ||||| |  ||||| |||   || ||||||||||||||||||  ||||||| |    
T  28406297 gcgaggcgagagcctctactcgccatggcgagttcaggttcagttcacaaaattttattctaaaatctttacaggttcaatctcattctccaatctttcc 28406396  T
Q  152 taatcattattacata-gttcaggcactcaaaa 183  Q
    |||| ||||||| | | ||||||||||||||||    
T  28406397 taattattattagacatgttcaggcactcaaaa 28406429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 23071695 - 23071617
Alignment:
Q  123 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  23071695 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 23071617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 18786566 - 18786446
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 195  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||| || |||  ||||||| || || |   |||||||||||||||| | ||||| ||     
T  18786566 cccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttgcctaatcaataatatacgtgttcaggcactcaaaatcatctaaagtt 18786467  T
Q  196 caacttaaggggcaaaactac 216  Q
    ||||||||||| |||||||||    
T  18786466 caacttaagggtcaaaactac 18786446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 22337422 - 22337544
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt-gtaactcccaaaaatccattcttaaactattccaggttcaatctcattc 139  Q
    |||||| |||||||||||||  ||||||||||||| |||||| |||||||   |||||  |||  | |||||| || || |||||||||||||||||| |    
T  22337422 ctgggtcactcgcgaggcgagagcctctactcgccgtggcgaattcaggtcagaactcaaaaagtttcattctaaatct-ttccaggttcaatctcatcc 22337520  T
Q  140 tagaatcttttctaatcattatta 163  Q
    || | ||||| |||||||||||||    
T  22337521 tacattctttcctaatcattatta 22337544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 22133948 - 22133878
Alignment:
Q  124 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  22133948 aggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22133878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 22412817 - 22412733
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactca 180  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||  ||||| |||||||||||||    
T  22412817 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatcatacat-gttcaggcactca 22412733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 22730968 - 22730894
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  22730968 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22730894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 22737911 - 22737841
Alignment:
Q  124 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||||||| ||| | ||||| ||||||||||||| ||| |||||||||||||||| | |||||||    
T  22737911 aggttcaatctcatcctacattctttcctaatcattattagatatgttcaggcactcaaaagcatctaagg 22737841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 23654146 - 23654064
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | ||||||||| |||||| | |||||||| |||||    
T  23654146 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcagtcaaaagcatctaaggttcaact 23654064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 22412953 - 22412900
Alignment:
Q  36 tgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 89  Q
    |||||||||| ||||| ||||||||  |||||||||||| ||||||||||||||    
T  22412953 tgtaactgggcaactcacgaggcgagagcctctactcgctatggcgagttcagg 22412900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 180
Target Start/End: Original strand, 23207717 - 23207801
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 180  Q
    |||||||||||||| ||||||| | | ||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  23207717 cccaaaaatccatttttaaactttcctaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 23207801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 23286235 - 23286317
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    |||||| |||||||||||| ||| | ||||| ||||||||||||| | | |||||| ||||||||| | |||||||| |||||    
T  23286235 attccatgttcaatctcatcctacattctttcctaatcattattagacatgttcagacactcaaaagcatctaaggttcaact 23286317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 27753961 - 27754035
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | ||| |||||||||||| | |||||||    
T  27753961 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttgaggcactcaaaagcatctaagg 27754035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 193
Target Start/End: Complemental strand, 32451744 - 32451590
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatccattcttaaactattccaggttcaatctcattc 139  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||||| ||  | ||||||  ||   ||||| |||||||||||| |    
T  32451744 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccatgttcaatctcatcc 32451645  T
Q  140 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    || | ||| | ||||||||||||| | | |||||||||||||||| | |||||||    
T  32451644 tacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 32451590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 194
Target Start/End: Complemental strand, 37863 - 37787
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttc-taatcattattacata-gttcaggcactcaaaaacctctaaggt 194  Q
    ||||||||||||||||||| ||| | ||||||| |||||||||||| | | |||||||||||||||| | ||||||||    
T  37863 attccaggttcaatctcatcctaca-tcttttcctaatcattattagacatgttcaggcactcaaaagcatctaaggt 37787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 20520014 - 20519957
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 89  Q
    ||||||||||| || ||||||||||||||  |||||||| ||| ||||||| ||||||    
T  20520014 attctgtaactaggcaactcgcgaggcgagagcctctacacgctatggcgacttcagg 20519957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 20309479 - 20309523
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattatta 163  Q
    ||||||||||||||||||| ||| | ||||| |||||||||||||    
T  20309479 attccaggttcaatctcatcctacattctttcctaatcattatta 20309523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 20519874 - 20519790
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 180  Q
    |||||||||||||| || |||| | ||| ||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  20519874 cccaaaaatccattttttaactttcccatgttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 20519790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 31756232 - 31756268
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagtt 85  Q
    ||||||||||||  |||||||||||||||||||||||    
T  31756232 ctcgcgaggcgagagcctctactcgccatggcgagtt 31756268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 95; Significance: 1e-46; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 130173 - 130359
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  |||||||||| ||||| ||| | ||| ||||||| | || ||||||||||||  |||||| |||||||||||||||| |||||||| ||||    
T  130173 gcgacaaagatcgcatttatcctaaacaaggcattttgtaactagttagctcgcgaggcgagagcctctgctcgccatggcgagtttaggtgtaattccc 130272  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 185  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | || | | ||||||||||||||||||    
T  130273 aaaaatccattcttaaactattccaggttcaatctcaatctagaatcttttctaatcataactagacatgttcaggcactcaaaaac 130359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 60536 - 60479
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 89  Q
    |||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||    
T  60536 attctgtaactgggaaactcgcgaggcgagagcctctactcgctatggcgagttcagg 60479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 60396 - 60312
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 180  Q
    |||||||||||||| ||||||| | ||| ||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  60396 cccaaaaatccatttttaaactttcccatgttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 60312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 3198 - 3392
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  |||||||||||||||| ||| | ||||||||||| |  || || |||||||| ||||||||||||||||||||||||||||| ||||||||    
T  3198 gcgacaaagatcgcatttaacctaaacaaggcattctgtaactagtcaattcacgaggcgagggcctctactcgccatggcgagttcaggtataactccc 3297  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    | || | | |||||||||||||||||||||||||||| |||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  3298 acaagttcgttcttaaactattccaggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 3392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 28194303 - 28194086
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  ||||||| ||||||||  |||| ||| ||||| |||||| ||||||||||||  ||||||||| ||||||||||||||||||| ||||| |    
T  28194303 gcgacaaagatcgcatgtaacctaaacaagacattttgtaaatgggtagctcgcgaggcgagagcctctacttgccatggcgagttcaggtgcaactcac 28194204  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcca 197  Q
    ||| || ||||||||||||||| |||||||||||||| |||| ||||||| |||||||| ||  |||| ||||||||||||||||||| || ||||| |     
T  28194203 aaagattcattcttaaactatttcaggttcaatctcaatctacaatctttcctaatcatcatcataca-agttcaggcactcaaaaacatccaaggttcg 28194105  T
Q  198 acttaaggggcaaaactac 216  Q
    |||||| || |||||||||    
T  28194104 acttaaaggtcaaaactac 28194086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 22921722 - 22921521
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  ||||||||||||| || ||| | ||||||||||| || |  |||||||||||  ||||||||||||||||||||||||| || |||||| |    
T  22921722 gcgacaaagatcgcatttaacccaaacaaggcattctgtaactaggcagttcgcgaggcgagagcctctactcgccatggcgagttcaagtctaactctc 22921623  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaa 198  Q
    |||||| | ||||||||||||||| |||||||||||| |||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||| |||    
T  22921622 aaaaattcgttcttaaactattcctggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaa 22921523  T
Q  199 ct 200  Q
    ||    
T  22921522 ct 22921521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 52927835 - 52927642
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca 100  Q
    |||||||  ||||||||||||||||||| | |||||||||||||  || ||||||||||| ||||||||||||||||||||||||||||| |||||   |    
T  52927835 gcgacaaagatcgcatttaacctaacaaggcattctgtaactggtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtctaactttaa 52927736  T
Q  101 aaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||||| |||||  |||   |||||||||||||||||||||  |||||||  |||||||||||| | | |||||||||||||||||| |||||||    
T  52927735 aaaattcattccaaaatctttccaggttcaatctcattctccaatctttcataatcattattagacatgttcaggcactcaaaaacatctaagg 52927642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 33681284 - 33681469
Alignment:
Q  10 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 108  Q
    |||||||||||| ||| ||| | | ||||||||||||||| |||||||||||  |||||| |||||||||||||||||||||| ||||| ||||||| ||    
T  33681284 atcgcatttaacataagcaaggcactctgtaactgggtaattcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaactcacaaaaattca 33681383  T
Q  109 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 193  Q
    |||| |||   |||||||||||||||||||||  ||||||| ||||||||||||  ||||| |||||| |||||||||| |||||||    
T  33681384 ttctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacata-ttcaggaactcaaaaacatctaagg 33681469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 35981541 - 35981325
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  ||||| |||||||||| ||| | ||||||||||| | || ||||||||||||  |||||||||| |||||||||||||||||| ||||| |    
T  35981541 gcgacaaagatcgcttttaacctaaacaaggcattctgtaactagttagctcgcgaggcgagagcctctactcaccatggcgagttcaggtgcaactcac 35981442  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcca 197  Q
    | |||| | |||||||||||| ||||||||||||||| |||| ||||||| |||||||| ||  |||| ||||||||||||||||||| || ||||| |     
T  35981441 ataaattcgttcttaaactatcccaggttcaatctcaatctacaatctttcctaatcatcatcataca-agttcaggcactcaaaaacatc-aaggttcg 35981344  T
Q  198 acttaaggggcaaaactac 216  Q
    |||||| || |||||||||    
T  35981343 acttaaaggtcaaaactac 35981325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 20637116 - 20637279
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  ||||| ||||||||||  |||| ||||||||||||  || ||||||||||||  ||||||||||||||||||||||||||||| ||||| |    
T  20637116 gcgacaaagatcgcttttaacctaaacaagacattctgtaactgattagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcac 20637215  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 163  Q
    |||||| | |||||||||||||||||||||||||| | |||  ||||||| |||||||| ||||    
T  20637216 aaaaattcgttcttaaactattccaggttcaatcttaatctccaatctttcctaatcatcatta 20637279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 86 - 203
Target Start/End: Original strand, 43697712 - 43697830
Alignment:
Q  86 caggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaa 184  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| | || | | |||||||||||||||||    
T  43697712 caggtgtaactcccgaaaatccattcttaaactattccaggttaaatctcaatctagaatcttttctaatcataaatagacatgttcaggcactcaaaaa 43697811  T
Q  185 cctctaaggtccaacttaa 203  Q
    | |||||||| ||||||||    
T  43697812 catctaaggttcaacttaa 43697830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 20248543 - 20248734
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||| ||||||||||||||||  |||  ||||||||||| | || ||||||||||||| ||||||||||||||||||||||||||||  |  || |    
T  20248543 gcgacaagaatcgcatttaacctaaataaggcattctgtaactagttagctcgcgaggcgatagcctctactcgccatggcgagttcaggttcagttcac 20248642  T
Q  100 aaaaatccattcttaaactat-tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctcta 190  Q
    |||||| ||||| |||| | | ||||||||||||||||||||   |||||| ||||||||||||| | | |||||||||||||||||| ||||    
T  20248643 aaaaattcattc-taaagtctctccaggttcaatctcattctccgatctttcctaatcattattagacatgttcaggcactcaaaaacatcta 20248734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 22237905 - 22238089
Alignment:
Q  10 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 108  Q
    |||||||||||||||| ||| | ||||||||||| |  || ||||||||||| |||||||||||||||||||||||||| ||| ||||| ||||| || |    
T  22237905 atcgcatttaacctaaacaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaagtgcaactcacaaaattc-a 22238003  T
Q  109 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||  |||   ||||||||| |||||||||||  ||||||| |||| |||||||| | | |||||||||||||||||  |||||||    
T  22238004 ttccaaaatctttccaggtttaatctcattctccaatctttcctaaccattattagacatgttcaggcactcaaaaatatctaagg 22238089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 193
Target Start/End: Original strand, 433312 - 433467
Alignment:
Q  39 aactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcatt 138  Q
    |||||||| |||||||||||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| |||   |||||||||||||||||||    
T  433312 aactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcatt 433411  T
Q  139 ctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||| | ||||| |||||||||| || | | |||||| ||||||||| | |||||||    
T  433412 ctacattctttcctaatcattaatagacatgttcagacactcaaaagcatctaagg 433467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 193
Target Start/End: Original strand, 21754350 - 21754495
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattcc-aggttcaatctcattctagaatc 146  Q
    |||||||||||||  |||||| |||||||||||||||||||||  |  || ||||| || ||||| ||| | |||| |||||||||||| ||||  ||||    
T  21754350 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaaaattc-attct-aaagtcttcccaggttcaatctctttctccaatc 21754447  T
Q  147 ttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  21754448 tttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 21754495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 182
Target Start/End: Complemental strand, 50210027 - 50209885
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 139  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | | |||||| |  |||||| || || ||||||||||||||||||||    
T  50210027 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagtttcattctaaatct-ttccaggttcaatctcattc 50209929  T
Q  140 tagaatcttttctaatcattattacata-gttcaggcactcaaa 182  Q
    || | ||||| ||||||||||||| | | |||||||||||||||    
T  50209928 tacattctttcctaatcattattagacatgttcaggcactcaaa 50209885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 21861250 - 21861132
Alignment:
Q  99 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggtcca 197  Q
    |||||||||||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | ||||||||||||| || | ||||| |  ||    
T  21861250 caaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacttgttcaggcactcagaatcatctaaagatca 21861151  T
Q  198 acttaaggggcaaaactac 216  Q
    ||||||||| |||||||||    
T  21861150 acttaagggtcaaaactac 21861132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 26065238 - 26065295
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 89  Q
    |||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||    
T  26065238 attctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcagg 26065295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 192
Target Start/End: Original strand, 34510087 - 34510239
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 140  Q
    |||||| ||||| |||||||  |||||| |||||| ||||||||||||||   | | |||||| | ||||||  ||   |||||||||||||||||| ||    
T  34510087 ctgggtcactcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatcct 34510186  T
Q  141 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaag 192  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | ||||||    
T  34510187 acattctttcctaatcattattagacatgttcaggcactcaaaagcatctaag 34510239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 21895989 - 21895870
Alignment:
Q  99 caaaaatccattctt-aaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggtcc 196  Q
    |||||||||||| || ||||| | ||||||||||||||| |||| || |||| ||||||||||||| | | ||||||||||||| || | ||||| |  |    
T  21895989 caaaaatccattttttaaactttcccaggttcaatctcaatctaaaaactttcctaatcattattatacttgttcaggcactcataatcatctaaagatc 21895890  T
Q  197 aacttaaggggcaaaactac 216  Q
    |||||||||| |||||||||    
T  21895889 aacttaagggtcaaaactac 21895870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 16759091 - 16759209
Alignment:
Q  99 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcca 197  Q
    |||||||||||  ||||||| |  |||||||||||||| |||| || |||  ||||||||||||| |   ||| |||||||||||||| |||||||| |     
T  16759091 caaaaatccatctttaaactttctcaggttcaatctcaatctaaaaacttgcctaatcattattatacgtgtttaggcactcaaaaacatctaaggttcg 16759190  T
Q  198 acttaaggggcaaaactac 216  Q
    ||||||||| |||||||||    
T  16759191 acttaagggtcaaaactac 16759209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 22355921 - 22355839
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  22355921 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 22355839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 22357607 - 22357525
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  22357607 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 22357525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 21342513 - 21342631
Alignment:
Q  99 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 196  Q
    |||||||||||| | ||| | | ||||||||| ||||| |||| || |||  |||||||||||||  |||| ||||| ||||||||| | |||||||| |    
T  21342513 caaaaatccattttaaaattttcccaggttcattctcaatctaaaaacttgcctaatcattattatacata-ttcagacactcaaaatcatctaaggttc 21342611  T
Q  197 aacttaaggggcaaaactac 216  Q
    |||||||||| |||||||||    
T  21342612 aacttaagggtcaaaactac 21342631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 21347378 - 21347496
Alignment:
Q  99 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 196  Q
    |||||||||||| | ||| | | ||||||||| ||||| |||| || |||  |||||||||||||  |||| ||||| ||||||||| | |||||||| |    
T  21347378 caaaaatccattttaaaattttcccaggttcattctcaatctaaaaacttgcctaatcattattatacata-ttcagacactcaaaatcatctaaggttc 21347476  T
Q  197 aacttaaggggcaaaactac 216  Q
    |||||||||| |||||||||    
T  21347477 aacttaagggtcaaaactac 21347496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 193
Target Start/End: Original strand, 22532577 - 22532729
Alignment:
Q  42 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattcta 141  Q
    ||||| |||||||||||||  |||||| ||| || ||||||||||| ||   | | |||||| | ||||||  ||   |||||||||||||||||| |||    
T  22532577 tgggtcactcgcgaggcgagagcctctgctcaccgtggcgagttcaagtcagatttccaaaagttcattctacaatccttccaggttcaatctcatccta 22532676  T
Q  142 gaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
     | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  22532677 cattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22532729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 180
Target Start/End: Original strand, 26065357 - 26065441
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 180  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  26065357 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 26065441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 49261607 - 49261690
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 83  Q
    |||||||  ||||| |||||||||| ||| | ||||||||||||| || ||||||||||||  ||||||| |||||||||||||    
T  49261607 gcgacaaagatcgcttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctattcgccatggcgag 49261690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 27250476 - 27250394
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||| ||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  27250476 attccaggttcaatcccatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 27250394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 35260898 - 35260852
Alignment:
Q  36 tgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 82  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  35260898 tgtaactgggaaactcgcgaggcgagggcctctactcgctatggcga 35260852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 50687031 - 50687097
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 163  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||||    
T  50687031 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatta 50687097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 183
Target Start/End: Complemental strand, 16367968 - 16367881
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaa 183  Q
    |||||||||||||  ||||||| ||||||||||| ||||| |||| || |||  |||||||||||  |||||| |||||||||||||||    
T  16367968 cccaaaaatccatctttaaacttttccaggttcattctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaa 16367881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 20918990 - 20919051
Alignment:
Q  123 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 183  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | ||||||||||||||||    
T  20918990 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaa 20919051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 16758949 - 16759005
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcag 88  Q
    ||||||||||| || ||||||||||| || |||||||||| || |||||||||||||    
T  16758949 attctgtaactaggcaactcgcgaggtgagggcctctacttgctatggcgagttcag 16759005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 35260813 - 35260729
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 180  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  35260813 cccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 35260729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 20846966 - 20846891
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||||||||||||||||||| ||| | ||||  ||||||||||||| | | |||||||||||||||| | |||||||    
T  20846966 attccaggttcaatctcatcctacattcttacctaatcattattagacatgttcaggcactcaaaagcatctaagg 20846891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 41049726 - 41049619
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 195  Q
    ||||||||| |||| | ||||| | ||||||||||||||| |||| || |||  |||| |||||||| | | ||||||||||||| |||| ||||||||     
T  41049726 cccaaaaattcattttcaaactttcccaggttcaatctcaatctaaaaacttgcctaaccattattatacatgttcaggcactcagaaacatctaaggtt 41049627  T
Q  196 caacttaa 203  Q
    | ||||||    
T  41049626 cgacttaa 41049619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 38801138 - 38801056
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||| ||| ||| | ||||| ||||||||||||| | | ||||||||||||||| || ||||| || |||||    
T  38801138 attccaggttcaatcacatcctacattctttcctaatcattattagacatgttcaggcactcaaagacatctaaagttcaact 38801056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 38801199 - 38801157
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||||||||||  ||||||||||||| ||||||||||||||    
T  38801199 actcgcgaggcgagagcctctactcgccgtggcgagttcaggt 38801157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 21861372 - 21861335
Alignment:
Q  51 cgcgaggcgatggcctctactcgccatggcgagttcag 88  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  21861372 cgcgaggcgagggcctctactcgctatggcgagttcag 21861335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 22354387 - 22354338
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| ||| |||||||||  ||||||||||||| ||||||||||||||    
T  22354387 ctgggtcacttgcgaggcgagagcctctactcgccgtggcgagttcaggt 22354338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 16093572 - 16093508
Alignment:
Q  99 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 163  Q
    |||||||||||| || |||| ||||||||||||||||| |||| || |||  | |||||||||||    
T  16093572 caaaaatccattttttaacttttccaggttcaatctcaatctaaaaacttgccaaatcattatta 16093508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 24087730 - 24087842
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 148  Q
    ||||||||||||  |||||||||||||| ||||||||  |||  ||| | ||| |||||||||| |  |||||||  ||||||||||| |||| ||  ||    
T  24087730 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactcaagaatccattctgactctattccgagttcaatctcagtctaaaacttt 24087829  T
Q  149 ttctaatcattat 161  Q
      |||||||||||    
T  24087830 gcctaatcattat 24087842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 5976 - 5760
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  |||||||||||||||| ||| | ||| ||||||||||||| ||||||||||| ||||||||||||| | |||||||||||||| || || |    
T  5976 gcgacaaagatcgcatttaacctaaacaaggcattatgtaactgggtaattcgcgaggcgagggcctctactcgctaaggcgagttcaggtgcaaatcac 5877  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaa 198  Q
     ||||||||| ||||||||||| | |||||||||||| |||| ||| ||| ||||||||||||| | | ||||||| |||||||||| |||||| | |||    
T  5876 -aaaatccatccttaaactattactggttcaatctcaatctacaatttttcctaatcattattatacatgttcaggtactcaaaaacatctaagattcaa 5778  T
Q  199 cttaaggggcaaaactac 216  Q
    ||||| || |||| ||||    
T  5777 cttaaaggtcaaatctac 5760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 888 - 666
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  |||||||||||||||| ||| | ||| ||||||||||||| ||||||||||| ||||||||||||| | |||||||||||||| ||||| |    
T  888 gcgacaaagatcgcatttaacctaaacaaggcattatgtaactgggtaattcgcgaggcgagggcctctactcgctaaggcgagttcaggtgcaactcac 789  T
Q  100 aaaaatccattcttaaactattccaggt------tcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaag 192  Q
     ||||||||| ||||||||||| |||||      ||||||||| |||| ||||||| ||||||||||||| | | |||||||||||||||||| ||||||    
T  788 -aaaatccatccttaaactattacaggttcaatctcaatctcaatctacaatctttcctaatcattattatacatgttcaggcactcaaaaacatctaag 690  T
Q  193 gtccaacttaaggggcaaaactac 216  Q
     | |||||||| || |||| ||||    
T  689 attcaacttaaaggtcaaatctac 666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 19532 - 19726
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||| |||||||||||| |||  |||| ||||||||||||||| | |||||||||||  |||||| |||||||||||||||||||||| ||| |      
T  19532 gcgacaaggatcgcatttaacataagcaagacattctgtaactgggtcattcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaacacat 19631  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||| |||||| |||   |||||||||||||||||||||  |||| || ||||||||||||| | | |||||||||||||||||| |||||||    
T  19632 aaaaattcattctaaaatctttccaggttcaatctcattctccaatccttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 19726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 405 - 590
Alignment:
Q  10 atcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 108  Q
    |||||||||||| |||  |||| ||||||||||||||| |||||||||||||  |||||| |||||||||||||||||||||| ||||| ||||||| ||    
T  405 atcgcatttaacataagcaagacattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaactcacaaaaattca 504  T
Q  109 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||| |||   ||||| |||||||||||||||  ||||||| ||||||||||||| | | ||| |||||||||||||  |||||||    
T  505 ttctaaaatctttccaagttcaatctcattctccaatctttcctaatcattattagacatgtttaggcactcaaaaaagtctaagg 590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 2498 - 2313
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  |||||||||| ||||| ||| | ||||||||||| |  || ||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  2498 gcgacaaagatcgcatttatcctaaacaaggcattctgtaactagtcaattcgcgaggcaatggcctctactcgccatggcgagttcaggtataactccc 2399  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 185  Q
    | || | | ||||| ||||| |||||||||||||||| |||  ||||||| ||||||||||||| | | ||||||||||||||||||    
T  2398 acaagtacgttctt-aactaatccaggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaac 2313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 9343 - 9536
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca 100  Q
    |||||||| ||||||||||||||| ||| | ||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||||||  |  || ||    
T  9343 gcgacaaggatcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggttcagttcaca 9442  T
Q  101 aaaatccattcttaaact-attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaagg 193  Q
    ||||| ||||| ||||||  |||||||| |||||||| |||| | ||||| |||||| |||||| | | |||||||||||||||| | |||||||    
T  9443 aaaattcattc-taaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaagcatctaagg 9536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 91 - 183
Target Start/End: Original strand, 227849 - 227942
Alignment:
Q  91 gtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| | | ||| ||||||||||||    
T  227849 gtaactcccaaaaatccattcttaaactattccaggttcaatctcaatctagaatctttcctaatcattattatacatgtttaggcactcaaaa 227942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 225705 - 225769
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaact 96  Q
    |||||||||||  |||||||||||||| | |||||||||| |  ||||||| |||||||||||||    
T  225705 attctgtaactatgtaactcgcgaggcaagggcctctacttgttatggcgatttcaggtgtaact 225769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 67 - 216
Target Start/End: Original strand, 12329 - 12478
Alignment:
Q  67 ctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacat 166  Q
    |||||||| ||||| | ||||| ||||||||| |||||||||||||||| |||||||||||||||||||| |||| ||||||| ||||||||||||| |     
T  12329 ctactcgctatggcaaattcagttgtaactccaaaaaatccattcttaa-ctattccaggttcaatctcaatctaaaatctttcctaatcattattatac 12427  T
Q  167 a-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 216  Q
    | |||||| ||||||||| | |||||    ||||||||||  |||||||||    
T  12428 atgttcagacactcaaaatcatctaaatatcaacttaaggatcaaaactac 12478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 45645 - 45450
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactc-c 98  Q
    |||||||  |||||||||| |||||  |||| ||||||||||| | || ||||||||||||  ||||||||||||||||||||||||||||  || || |    
T  45645 gcgacaaagatcgcatttatcctaaacaagacattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttcaggtacaattcac 45546  T
Q  99 caaaaatccattcttaaactatt-ccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 193  Q
     |||||| ||||| |||| | || ||||||||||||||||||   ||||||| ||||||||||||  ||||| ||||||||||||||||| |||||||    
T  45545 aaaaaattcattc-taaagtcttaccaggttcaatctcattccccaatctttcctaatcattattagacata-ttcaggcactcaaaaacatctaagg 45450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 6802 - 6987
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  |||||||||| ||||| ||| | ||| ||||||| |  || |||||||| || |||||| |||||||||||||||||||||| ||||||||    
T  6802 gcgacaaagatcgcatttatcctaaacaaggcattttgtaactagtcaattcgcgaggggagggcctccactcgccatggcgagttcaggtataactccc 6901  T
Q  100 a-aaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 183  Q
    | ||  | | |||||||||||||||||||||||||||| |||  ||||||| ||||| ||||||| | | || |||||||||||||    
T  6902 acaagtttcgttcttaaactattccaggttcaatctcaatctccaatctttcctaattattattagacatgtccaggcactcaaaa 6987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 8784 - 8824
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcag 88  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  8784 actcgcgaggcgagggcctctactcgctatggcgagttcag 8824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 1900 - 1748
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 131  Q
    ||||||||||||||| |||||||||||||  |||||| ||||||||||||| |||||||   | | |||||  | |||||| |||   ||||||||||||    
T  1900 attctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgaattcaggtcagatttccaaagtttcattctaaaatctttccaggttcaa 1801  T
Q  132 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 183  Q
    |||||||||| | ||||| ||||||||||||| | | ||||||||||||||||    
T  1800 tctcattctacattctttcctaatcattattagacatgttcaggcactcaaaa 1748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 160951 - 161145
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||  ||| |||||| |||||| |||| ||||||||||| | || |||| |||| ||  |||||||||||||||||||| |||||||  |  || |    
T  160951 gcgacaaagatcacatttatcctaaccaagacattctgtaactagttacctcgtgaggtgagagcctctactcgccatggcgacttcaggttcagttcac 161050  T
Q  100 aaaaatccattcttaaactat-tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||| |||||| ||| | | ||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  161051 aaaaattcattct-aaagtctctccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 161145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 4814 - 4968
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactatt-ccaggttcaatctcattc 139  Q
    |||||| |||||||| ||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| ||| | || ||||||||||||||||||    
T  4814 ctgggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattc 4913  T
Q  140 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    || | ||||||||||||||||||| | | |||||||||||||||| | |||||||    
T  4914 tacattcttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 4968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 12396 - 12550
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactatt-ccaggttcaatctcattc 139  Q
    |||||| |||||||| ||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| ||| | || ||||||||||||||||||    
T  12396 ctgggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattc 12495  T
Q  140 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    || | ||||||||||||||||||| | | |||||||||||||||| | |||||||    
T  12496 tacattcttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 12550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 22348 - 22502
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactatt-ccaggttcaatctcattc 139  Q
    |||||| |||||||| ||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| ||| | || ||||||||||||||||||    
T  22348 ctgggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattc 22447  T
Q  140 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    || | ||||||||||||||||||| | | |||||||||||||||| | |||||||    
T  22448 tacattcttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 22502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 193
Target Start/End: Original strand, 132967 - 133113
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 147  Q
    |||||||||||||  |||||| |||||||||||||||||||||  |  || ||||| | |||||| ||    |||||||||||||||||||||  |||||    
T  132967 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaaaatttcattctaaagtctttccaggttcaatctcattctccaatct 133066  T
Q  148 tttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    || ||||||||||||| | | |||||||||||||||||| |||||||    
T  133067 ttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 133113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 163
Target Start/End: Complemental strand, 40018 - 39864
Alignment:
Q  10 atcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 108  Q
    ||||||||||||||||  |||  ||| ||||||| | || ||||||||||||  ||||||||| |||||||| ||||||||| ||||||||| || | |     
T  40018 atcgcatttaacctaaataaggcattttgtaactagttagctcgcgaggcgagagcctctacttgccatggcaagttcaggtataactcccacaagttcg 39919  T
Q  109 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 163  Q
    |||||||||||||||||||| ||| ||| |||  ||||||| |||| ||||||||    
T  39918 ttcttaaactattccaggttgaatgtcaatctccaatctttcctaaccattatta 39864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 101781 - 101854
Alignment:
Q  121 tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  101781 tccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacttctaagg 101854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 193
Target Start/End: Original strand, 12228 - 12388
Alignment:
Q  33 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaat 132  Q
    |||||||| |||| ||||||||||| ||  ||||||||||||||||||||||||||||     ||| |||| | ||||||| || || ||||||||||||    
T  12228 ttctgtaattgggcaactcgcgaggtgagagcctctactcgccatggcgagttcaggtcagtttccaaaaagttcattctt-aattaatccaggttcaat 12326  T
Q  133 ctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 193  Q
    ||||||||| | ||||| ||||||||||||  ||||| ||||| ||||||||| | |||||||    
T  12327 ctcattctacattctttcctaatcattattaaacata-ttcagacactcaaaagcatctaagg 12388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 10385 - 10283
Alignment:
Q  10 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 109  Q
    ||||||||||||||||||| | | | |||||| ||  ||||||||||||||  ||||||||||||  ||||||||||||||||||||| ||||||| |||    
T  10385 atcgcatttaacctaacaaggcagtatgtaacaggacaactcgcgaggcgagagcctctactcgctttggcgagttcaggtgtaactcacaaaaattcat 10286  T
Q  110 tct 112  Q
    |||    
T  10285 tct 10283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 10289 - 10228
Alignment:
Q  134 tcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 194  Q
    |||||||| ||||||| ||||||||||||| | | |||||||||||||||||| ||||||||    
T  10289 tcattctaaaatctttactaatcattattagacatgttcaggcactcaaaaacatctaaggt 10228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 193
Target Start/End: Original strand, 32397 - 32543
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 147  Q
    |||||||||| ||  |||||| |||||||||||||||||||||  |  || ||||| | |||||| ||    |||||||||||||||||||||  |||||    
T  32397 actcgcgaggtgagagcctctgctcgccatggcgagttcaggttcagttcacaaaatttcattctaaagtctttccaggttcaatctcattctccaatct 32496  T
Q  148 tttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    || ||||||||||||| | | |||||||||||||||||| |||||||    
T  32497 ttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 32543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 215
Target Start/End: Complemental strand, 27400 - 27281
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 195  Q
    |||||||||||||||||||| | | |||||||||||||||  ||| || |||  ||||||||||||| | | |||||||||||||||| | ||||| ||     
T  27400 cccaaaaatccattcttaaaatttcccaggttcaatctcaaactaaaaacttgcctaatcattattatacatgttcaggcactcaaaatcatctaaagtt 27301  T
Q  196 caacttaaggggcaaaacta 215  Q
    ||||||||||| ||||||||    
T  27300 caacttaagggtcaaaacta 27281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 27526 - 27485
Alignment:
Q  47 aactcgcgaggcgatggcctctactcgccatggcgagttcag 88  Q
    |||||||||||||| ||||||||||||| |||||||||||||    
T  27526 aactcgcgaggcgagggcctctactcgctatggcgagttcag 27485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 3855 - 3937
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| ||| | ||||| |||||||||| ||  ||| |||||||||||||||  | |||||||| |||||    
T  3855 attccaggttcaatctcatcctacattctttcctaatcattactagtcat-gttcaggcactcaaagtcatctaaggttcaact 3937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 7919 - 8001
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| ||| | ||||| |||||||||| ||  ||| |||||||||||||||  | |||||||| |||||    
T  7919 attccaggttcaatctcatcctacattctttcctaatcattactagtcat-gttcaggcactcaaagtcatctaaggttcaact 8001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 17078 - 17240
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaa-ctattccaggttca 130  Q
    ||||||||| | ||| |||||||||||||  |||||| |||||||||||||||||||||   | || ||||  |  ||||| ||| |||| |||||||||    
T  17078 attctgtaaataggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcatattctcaaagttttattctaaaatctat-ccaggttca 17176  T
Q  131 atctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  17177 atctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 17240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 205
Target Start/End: Complemental strand, 24279 - 24169
Alignment:
Q  97 cccaaaaatcc-attcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 194  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||| || |||  ||||||||||||| |||  ||||||||||||||| | |||||| |    
T  24279 cccaaaaatcccatttttaaactattccaggttcaatctcaatctaaaagcttgcctaatcattattatatatattcaggcactcaaaatcatctaagct 24180  T
Q  195 ccaacttaagg 205  Q
     ||||||||||    
T  24179 tcaacttaagg 24169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 193
Target Start/End: Complemental strand, 20247 - 20087
Alignment:
Q  33 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 131  Q
    |||||||| | || |||| |||||||||  ||||||||||||||||||||||||||||  | || ||||||| | ||||||| || || |||||||||||    
T  20247 ttctgtaattaggcaacttgcgaggcgagagcctctactcgccatggcgagttcaggt-cagcttccaaaaagttcattctt-aattaatccaggttcaa 20150  T
Q  132 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||| | ||||| ||| ||||||||| | | ||||||| |||||||| | |||||||    
T  20149 tctcattctacattctttcctactcattattaaacatgttcaggaactcaaaagcatctaagg 20087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 193
Target Start/End: Complemental strand, 25879 - 25726
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 140  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | | |||||||| ||||||  ||   || ||||||||||||||| ||    
T  25879 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaaattcattctacaatcttttcaggttcaatctcatcct 25780  T
Q  141 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  25779 acattctttcctaatcattattagacatgttcaggcactcaaaaccatctaagg 25726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 7929 - 7841
Alignment:
Q  1 gcgacaagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 89  Q
    |||||||  |||||||||| |||||||| | ||| |||||||||| ||||||||||||||  |||| ||||||| ||||||||||||||    
T  7929 gcgacaaagatcgcatttaccctaacaaggcattttgtaactgggcaactcgcgaggcgagagcctttactcgctatggcgagttcagg 7841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 29011 - 28935
Alignment:
Q  124 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaac 199  Q
    |||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| ||||    
T  29011 aggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaac 28935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 45; Significance: 9e-17; HSPs: 6)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 62913 - 63021
Alignment:
Q  86 caggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaa 184  Q
    |||||| ||||| ||||||| |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||| |||||||||||    
T  62913 caggtgcaactcacaaaaattcattctaaaatatttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcatgcactcaaaaa 63012  T
Q  185 cctctaagg 193  Q
    | |||||||    
T  63013 catctaagg 63021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 136207 - 136132
Alignment:
Q  14 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 89  Q
    ||||||||||||||| |  |||| ||| |||  ||||||||||||||  |||||||||||| ||||||||||||||    
T  136207 catttaacctaacaaggtgttctataaatggacaactcgcgaggcgagagcctctactcgctatggcgagttcagg 136132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 144915 - 144840
Alignment:
Q  14 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 89  Q
    ||||||||||||||| |  |||| ||| |||  ||||||||||||||  |||||||||||| ||||||||||||||    
T  144915 catttaacctaacaaggtgttctataaatggacaactcgcgaggcgagagcctctactcgctatggcgagttcagg 144840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 136049 - 135942
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 195  Q
    ||||||||| |||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | ||||| ||||||| |  ||||||||||     
T  136049 cccaaaaattcatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaagcactcagagtcctctaaggtt 135950  T
Q  196 caacttaa 203  Q
    | ||||||    
T  135949 cgacttaa 135942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 144757 - 144650
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 195  Q
    ||||||||| |||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | ||||| ||||||| |  ||||||||||     
T  144757 cccaaaaattcatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaagcactcagagtcctctaaggtt 144658  T
Q  196 caacttaa 203  Q
    | ||||||    
T  144657 cgacttaa 144650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 124891 - 124940
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  124891 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 124940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 43 - 193
Target Start/End: Original strand, 2159 - 2311
Alignment:
Q  43 gggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatccattcttaaactattccaggttcaatctcattcta 141  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||   | ||||| ||  | ||||||  ||   |||||||||||||||||| |||    
T  2159 gggtcactcgtgaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatccta 2258  T
Q  142 gaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
     | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  2259 cattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 2311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 205
Target Start/End: Complemental strand, 119280 - 119200
Alignment:
Q  126 gttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaagg 205  Q
    ||||||||||| |||| || ||| ||||||||||||  |||||| ||||||||||||||| | ||||| || ||||||||||    
T  119280 gttcaatctcaatctaaaaacttgtctaatcattattatacata-ttcaggcactcaaaatcatctaatgttcaacttaagg 119200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 5966 - 6053
Alignment:
Q  107 cattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaagg 193  Q
    |||||||||||||||||| ||||||||||| |||  ||||||| ||||||||||||| |   |||||||||||||||||| |||||||    
T  5966 cattcttaaactattccaagttcaatctcaatctccaatctttcctaatcattattagacctgttcaggcactcaaaaacatctaagg 6053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 193
Target Start/End: Complemental strand, 28616 - 28470
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattcc-aggttcaatctcattctagaatc 146  Q
    |||||||||||||  |||||| |||||||||||||||||||||  |  || ||||| | |||||| ||| | |||  |||||||||||||||||  ||||    
T  28616 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaaaatttcattct-aaagtcttcgtaggttcaatctcattctccaatc 28518  T
Q  147 ttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  28517 tttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 28470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 193
Target Start/End: Complemental strand, 17029 - 16876
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 139  Q
    |||||| |||||||||||||  |||||| ||| || ||||||||||||||   | | |||||| |  |||||| || || ||||||||||||||||||||    
T  17029 ctgggtcactcgcgaggcgagagcctctgctctccgtggcgagttcaggtcagaattccaaaagtttcattctaaatct-ttccaggttcaatctcattc 16931  T
Q  140 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  16930 tacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 16876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 79096 - 79016
Alignment:
Q  121 tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||||| | || || ||||||||||||| | | ||||| |||||||||| | |||||||| |||||    
T  79096 tccaggttcaatctcattctacattccttcctaatcattattaaacatgttcatgcactcaaaagcatctaaggttcaact 79016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 79151 - 79107
Alignment:
Q  33 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccat 77  Q
    |||||||| |||| ||||||||||||||  |||||||||||||||    
T  79151 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccat 79107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 193
Target Start/End: Complemental strand, 15422 - 15276
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaa-ctattccaggttcaatctcattctagaatc 146  Q
    |||||||||||||  |||||| ||||| |||||||||||||||   | |||||||  | |||||| ||| |||| |||| ||||||||||||||| | ||    
T  15422 actcgcgaggcgagagcctctgctcgctatggcgagttcaggtcagattcccaaagtttcattctaaaatctat-ccagattcaatctcattctacattc 15324  T
Q  147 ttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 193  Q
    ||| ||||||||||||  ||||| ||||||||||||||| | |||||||    
T  15323 tttcctaatcattattaaacata-ttcaggcactcaaaagcatctaagg 15276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 13007 - 13124
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 195  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||| || |||  |||||||||| || | | | |||||||||||||| | ||||| ||     
T  13007 cccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttgcctaatcattaatatacatggtcaggcactcaaaatcatctaaagtt 13106  T
Q  196 caacttaaggggcaaaac 213  Q
    ||||||||||| ||||||    
T  13107 caacttaagggtcaaaac 13124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 649 - 802
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 140  Q
    |||||| |||||||||||||  |||||||||||||  ||||||||||| |   | ||| |||  | |||||| ||    ||| |||||||||||||||||    
T  649 ctgggtcactcgcgaggcgagagcctctactcgccgcggcgagttcagttcagattccaaaagtttcattctaaattctttctaggttcaatctcattct 748  T
Q  141 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    | | ||||||||||||||||||| | | |||||||||||||||| | |||||||    
T  749 acattcttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 183
Target Start/End: Original strand, 3777 - 3920
Alignment:
Q  42 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcc-attcttaaactattccaggttcaatctcattct 140  Q
    ||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||||| || |   |||||  ||  ||||||||||||||||||| ||    
T  3777 tgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttgattctacaatcattccaggttcaatctcatcct 3876  T
Q  141 agaatcttttctaatcattattacata-gttcaggcactcaaaa 183  Q
    | | ||||| ||||||||||||| | | |||||| |||||||||    
T  3877 acattctttcctaatcattattagacatgttcagacactcaaaa 3920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 213
Target Start/End: Original strand, 14004 - 14119
Alignment:
Q  99 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 196  Q
    |||||||||||| ||||||  | |||||| |||||||| |||| || |||  |||||||||||||  |||| ||||||||||||||| | |||||||| |    
T  14004 caaaaatccatttttaaacattaccaggtccaatctcaatctaaaaacttacctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 14102  T
Q  197 aacttaaggggcaaaac 213  Q
    |||||||||| ||||||    
T  14103 aacttaagggacaaaac 14119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 11260 - 11178
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | ||||||||||||||||   |||||||| |||||    
T  11260 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagaatctaaggttcaact 11178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 193
Target Start/End: Complemental strand, 16413 - 16260
Alignment:
Q  42 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattct 140  Q
    ||||| |||||||||||||  |||||| |||||||||||||||||||||   | | |||||  |  |||||  |||   |||||||||||||||||||||    
T  16413 tgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggttagatttccaaacgtttcattcgaaaatctttccaggttcaatctcattct 16314  T
Q  141 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  16313 aaattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 16260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 39067 - 39219
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 140  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | |||  ||  | |||||  || || |||||||||||||||||||||    
T  39067 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccacaagtttcattcaaaatct-ttccaggttcaatctcattct 39165  T
Q  141 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  39166 acattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 39219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 53230 - 53113
Alignment:
Q  97 cccaaaaatccattctt-aaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggt 194  Q
    |||||||||||||| || ||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||||| | ||||| ||    
T  53230 cccaaaaatccattttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacttgttcaggcactcaaaatcatctaaagt 53131  T
Q  195 ccaacttaaggggcaaaa 212  Q
     ||||||||||| |||||    
T  53130 tcaacttaagggtcaaaa 53113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 53354 - 53314
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcag 88  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  53354 actcgcgaggcgagggcctctactcgctatggcgagttcag 53314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 8029 - 7948
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    |||||||||||||||||| ||| | ||||| ||||||| ||||| | | |||||||||||||||  | |||||||| |||||    
T  8029 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaact 7948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 15921 - 15866
Alignment:
Q  32 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttca 87  Q
    |||||||||||||| |||||||||||||| ||||| ||||||| ||||||||||||    
T  15921 attctgtaactgggcaactcgcgaggcgagggcctatactcgctatggcgagttca 15866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 13570 - 13636
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 163  Q
    |||||||||||||||||||||| | ||||||||||||||| |||| || |||  |||||||||||||    
T  13570 cccaaaaatccattcttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatta 13636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 3133 - 3231
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 194  Q
    |||||||||||||| ||||||| | ||| ||||||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||| | ||||||||    
T  3133 cccaaaaatccatttttaaactttcccaagttcaatctcaatctaaaaacttgcctaatcattattgtacata-ttcaggcactcaaaatcatctaaggt 3231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 19724 - 19649
Alignment:
Q  14 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 89  Q
    ||||||||||||||| |  ||||||||||||| ||||| ||||||||  |||||||||| | ||||||||||||||    
T  19724 catttaacctaacaaggtgttctgtaactgggcaactcacgaggcgagagcctctactccctatggcgagttcagg 19649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 40198 - 40268
Alignment:
Q  20 acctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    ||||||||| | | |||||  |||||| |||||||||||||  ||||||||||||| ||||||||||||||    
T  40198 acctaacaaggtactctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggt 40268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 103341 - 103234
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 195  Q
    ||||||||| |||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | ||||||||||||| || ||||||||||     
T  103341 cccaaaaattcatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcagaatcctctaaggtt 103242  T
Q  196 caacttaa 203  Q
    | ||||||    
T  103241 cgacttaa 103234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 103478 - 103403
Alignment:
Q  14 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 89  Q
    ||||||||||||||| |  |||||||| |||  |||||| |||||||  |||||||||||| ||||||||||||||    
T  103478 catttaacctaacaaggtgttctgtaaatggacaactcgtgaggcgagagcctctactcgctatggcgagttcagg 103403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 183
Target Start/End: Original strand, 80701 - 80788
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 183  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | ||||||||||||||||    
T  80701 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcaaaa 80788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 128775 - 128735
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagttcagg 89  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  128775 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 128735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 193
Target Start/End: Complemental strand, 2609 - 2464
Alignment:
Q  48 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 147  Q
    |||||||||||||  |||||||||||||||||||||||||||| | | | |  ||| | |||||| |||   || ||||||||| ||||||||  |||||    
T  2609 actcgcgaggcgagagcctctactcgccatggcgagttcaggt-tcagttcacaaatttcattctaaaatctttacaggttcaaactcattctccaatct 2511  T
Q  148 tttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    || ||||||||||||| | | ||||||| |||||||| | |||||||    
T  2510 ttcctaatcattattagacatgttcaggtactcaaaagcatctaagg 2464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 185
Target Start/End: Original strand, 211 - 356
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgt-aactcccaaaaatccattcttaaactattccaggttcaatctcattc 139  Q
    |||||| ||||||| |||||  ||||||||||||  ||||||||||||||   |||||  |||  | |||||| || || |||||||||||||||||| |    
T  211 ctgggtcactcgcgtggcgagagcctctactcgctgtggcgagttcaggtcagaactcaaaaagtttcattctaaatct-ttccaggttcaatctcatcc 309  T
Q  140 tagaatcttttctaatcattattacata-gttcaggcactcaaaaac 185  Q
    || | ||||| ||||||||||||| | | ||||||||||||||||||    
T  310 tacattctttcctaatcattattagacatgttcaggcactcaaaaac 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 34509 - 34587
Alignment:
Q  123 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  34509 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 34587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 13398 - 13447
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  13398 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 13447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 2177 - 2099
Alignment:
Q  123 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  2177 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 2099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 52218 - 52372
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 139  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||||| || |  ||||||  ||   |||||||||||||||||| |    
T  52218 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcc 52317  T
Q  140 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  52318 tacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 52372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 200
Target Start/End: Complemental strand, 167721 - 167644
Alignment:
Q  124 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    |||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  167721 aggttcaatctcatcctaaattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 167644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 167794 - 167745
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  167794 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 167745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 2820 - 2739
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  2820 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 2739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 8298 - 8185
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 148  Q
    ||||||||| ||  |||||||||||||| ||||| ||  |||  ||| | ||| |||||||||| | ||||||||| |||||||||||||||| || |||    
T  8298 ctcgcgaggtgagagcctctactcgccacggcgatttagggtaaaacactcaagaatccattctgacactattccaagttcaatctcattctaaaacctt 8199  T
Q  149 ttctaatcattatt 162  Q
      ||||||||||||    
T  8198 gcctaatcattatt 8185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 695 - 623
Alignment:
Q  122 ccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||||||| ||||| ||||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  695 ccaggttcaatctcgttctacaatctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 213
Target Start/End: Complemental strand, 1461 - 1344
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 195  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||| || ||| ||||||||||| || | | |||||||||||||||| | ||| | ||     
T  1461 cccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttgtctaatcattaatatacatgttcaggcactcaaaatcatctgaagtt 1362  T
Q  196 caacttaaggggcaaaac 213  Q
    |||||| |||| ||||||    
T  1361 caactttagggtcaaaac 1344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 28924 - 28996
Alignment:
Q  122 ccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||||||||||||| | ||||| ||||||||||||| | | ||||||| |||||||| | |||||||    
T  28924 ccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggaactcaaaagcatctaagg 28996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 194
Target Start/End: Complemental strand, 32772 - 32619
Alignment:
Q  42 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattcta 141  Q
    ||||| ||||||||||||   |||||| |||||  |||||||||  |||| ||||| ||||||| |||||| |||   || ||||||||||||||||||     
T  32772 tgggtcactcgcgaggcgggagcctctcctcgctgtggcgagttagggtgcaactcacaaaaattcattctaaaatctttacaggttcaatctcattctc 32673  T
Q  142 gaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 194  Q
     | || || ||||||||||||| | | |||||| ||||||||| | ||||||||    
T  32672 cagtccttcctaatcattattagacatgttcagacactcaaaagcatctaaggt 32619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 46233 - 46386
Alignment:
Q  42 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattcta 141  Q
    ||||| ||||||||||||   |||||| |||||  |||||||||  |||| ||||| ||||||| |||||| |||   || ||||||||||||||||||     
T  46233 tgggtcactcgcgaggcgggagcctctcctcgctgtggcgagttagggtgcaactcacaaaaattcattctaaaatctttacaggttcaatctcattctc 46332  T
Q  142 gaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 194  Q
     | || || ||||||||||||| | | |||||| ||||||||| | ||||||||    
T  46333 cagtccttcctaatcattattagacatgttcagacactcaaaagcatctaaggt 46386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 16473 - 16537
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 183  Q
    |||||||||||||||| | ||| | ||||| ||||||||||||| | | ||||||||||||||||    
T  16473 ttccaggttcaatctcgtcctacattctttcctaatcattattagacatgttcaggcactcaaaa 16537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 5854 - 5782
Alignment:
Q  122 ccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||||||||| ||| ||||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  5854 ccaggttcaatctcatcctacaatctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 5782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 7095 - 7213
Alignment:
Q  99 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 196  Q
    |||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||  |||||| ||||| ||||||||| | |||||  | |    
T  7095 caaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcagtcactcaaaatcatctaaaattc 7193  T
Q  197 aacttaaggggcaaaactac 216  Q
    |||||||||  |||||||||    
T  7194 aacttaaggttcaaaactac 7213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 799 - 717
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||  ||||| ||||||||||||||| | |||||||| |||||    
T  799 attccaggttcaatctcatcctacattctttcctaatcattattagacata-ttcaggcactcaaaagcatctaaggttcaact 717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 867 - 818
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  867 ctgggttactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 194
Target Start/End: Complemental strand, 10173 - 10097
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 194  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | ||||||||    
T  10173 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggt 10097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 20425 - 20572
Alignment:
Q  47 aactcgcgaggcgatggcctctactcgccatggcgagttcaggtgt-aactcccaaaaatccattcttaaactattccaggttcaatctcattctagaat 145  Q
    ||||||||||||||  |||||| |||| | ||||||| ||||||   |||||| |||  | |||||| || || ||||||||||||||| |||||| | |    
T  20425 aactcgcgaggcgagagcctctgctcgtcgtggcgagctcaggtcagaactccaaaagtttcattctaaatct-ttccaggttcaatcttattctacatt 20523  T
Q  146 cttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  20524 ctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 20572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 193
Target Start/End: Original strand, 20717 - 20863
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattct-taaactattccaggttcaatctcattctagaatc 146  Q
    ||||||||||||  |||||| |||||| ||||||||||||||   | ||||| || |  |||||| ||| || |||||||||||||||||| ||| | ||    
T  20717 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctataatct-ttccaggttcaatctcatcctacattc 20815  T
Q  147 ttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    ||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  20816 tttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 20863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 183
Target Start/End: Original strand, 25545 - 25632
Alignment:
Q  97 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 183  Q
    |||||||||||||| ||||||| ||||| ||||||||||| |||| || |||  ||||||||||||| | |  |||||||||||||||    
T  25545 cccaaaaatccatttttaaacttttccaagttcaatctcaatctaaaaacttgcctaatcattattatacattttcaggcactcaaaa 25632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 2156 - 1962
Alignment:
Q  1 gcgacaagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccc 99  Q
    |||||||| |||||||||||||||| ||| | ||||||||||      |||||||||||||  |||||| || ||||||||||||||||||  |  || |    
T  2156 gcgacaaggatcgcatttaacctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgcttgccatggcgagttcaggttcagttcac 2057  T
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||| | |||||| ||    ||  | |||||||||||||||  ||||||| ||||||||||||| | | ||||||  |||||||||| |||||||    
T  2056 aaaatttcattctaaagtctttttatgttcaatctcattctccaatctttcctaatcattattagacatgttcagtgactcaaaaacatctaagg 1962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 4878 - 4796
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||  | |||||||| |||||    
T  4878 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaggcatctaaggttcaact 4796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 13869 - 13951
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| ||| |  |||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  13869 attccaggttcaatctcatgctacatcctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 13951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 310 - 392
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||| ||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  310 attccagattcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 5086 - 5168
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||| ||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  5086 attccagattcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 5168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 243 - 291
Alignment:
Q  42 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    ||||| ||| |||||||||  |||||| |||||||||||||||||||||    
T  243 tgggtcacttgcgaggcgagagcctctgctcgccatggcgagttcaggt 291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 5019 - 5067
Alignment:
Q  42 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    ||||| ||| |||||||||  |||||| |||||||||||||||||||||    
T  5019 tgggtcacttgcgaggcgagagcctctgctcgccatggcgagttcaggt 5067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 17742 - 17668
Alignment:
Q  121 tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 194  Q
    ||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | ||||||||    
T  17742 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggt 17668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 18693 - 18619
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  18693 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 18619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 29149 - 29239
Alignment:
Q  122 ccaggttcaatctcattctagaatcttttctaatcattattacatag-ttcaggcactcaaaaacctctaaggtccaacttaaggggcaaa 211  Q
    |||||| |||||||| |||| || |||  ||||||||||||| |||  ||||||||||||||| | |||||||| ||||||||||| ||||    
T  29149 ccaggtccaatctcaatctaaaaacttgcctaatcattattatatatattcaggcactcaaaatcatctaaggttcaacttaagggacaaa 29239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 200
Target Start/End: Complemental strand, 791 - 714
Alignment:
Q  124 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    |||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  791 aggttcaatctcatcctaaattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 864 - 815
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  864 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 16657 - 16738
Alignment:
Q  123 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 203  Q
    ||||||||||||| | ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| ||||||||    
T  16657 caggttcaatctcgtcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaacttaa 16738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 16047 - 16118
Alignment:
Q  123 caggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 193  Q
    ||||||||||||||||||| | ||||| ||||||||||||  ||||| ||||||||||||||| | |||||||    
T  16047 caggttcaatctcattctacattctttcctaatcattattagacata-ttcaggcactcaaaagcatctaagg 16118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 211
Target Start/End: Complemental strand, 18021 - 17909
Alignment:
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcca 197  Q
    ||||||||||| ||||||  | |||||| |||||||| |||| || |||  |||||||||||  |||||| |||| ||||||||||   |||||||| ||    
T  18021 aaaaatccatttttaaaccttcccaggtccaatctcaatctaaaaacttgcctaatcattattatacata-ttcatgcactcaaaattatctaaggttca 17923  T
Q  198 acttaaggggcaaa 211  Q
    ||||||||| ||||    
T  17922 acttaagggacaaa 17909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 338 - 374
Alignment:
Q  49 ctcgcgaggcgatggcctctactcgccatggcgagtt 85  Q
    |||||||||||| ||||||||||||||||||||||||    
T  338 ctcgcgaggcgagggcctctactcgccatggcgagtt 374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 8267 - 8203
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 183  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | ||||||||||||||||    
T  8267 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaa 8203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 15213 - 15127
Alignment:
Q  118 tattccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtccaacttaa 203  Q
    |||||||||||||||||||| ||| | ||||| ||||||||||||  ||||| || |||||||||||| | |||| ||| ||||||||    
T  15213 tattccaggttcaatctcatcctacattctttcctaatcattattagacata-ttaaggcactcaaaagcatctacggttcaacttaa 15127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 1633 - 1562
Alignment:
Q  18 taacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 89  Q
    ||||||||||| |  |||||||| |||| | ||| ||||||||  |||||||||||| ||||||||||||||    
T  1633 taacctaacaaggtgttctgtaattgggcatctcacgaggcgagagcctctactcgctatggcgagttcagg 1562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 183
Target Start/End: Complemental strand, 827 - 684
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 140  Q
    |||||| |||||||||||||  |||||  ||| || ||||||||||||||   | | |||||| | ||||||  ||   || ||| ||||||||||||||    
T  827 ctgggtcactcgcgaggcgagagcctccgctcaccgtggcgagttcaggtcagatttccaaaagttcattctacaatcttttcagattcaatctcattct 728  T
Q  141 agaatcttttctaatcattattacata-gttcaggcactcaaaa 183  Q
    | | ||||| ||||||||||||| | | ||||||||||||||||    
T  727 acattctttcctaatcattattagacatgttcaggcactcaaaa 684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 35625 - 35508
Alignment:
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcca 197  Q
    ||||||||| | ||||||| |  ||||| | |||||| |||| || |||  |||||||||||||  |||| ||||||||||||||| | | |||||| ||    
T  35625 aaaaatccacttttaaactttctcaggtccgatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaatcatttaaggttca 35527  T
Q  198 acttaaggggcaaaactac 216  Q
    ||||||||| |||||||||    
T  35526 acttaagggacaaaactac 35508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 268094 - 268157
Alignment:
Q  100 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 163  Q
    ||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||||    
T  268094 aaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatta 268157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 1288 - 1370
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattatta-catagttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| ||| | ||||| |||||||||||||  |  |||||||||||||||  | |||||||| |||||    
T  1288 attccaggttcaatctcatcctacattctttcctaatcattattagtaatgttcaggcactcaaaggcatctaaggttcaact 1370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 5222 - 5304
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | |  |||| |||||||||| | |||||||| |||||    
T  5222 attccaggttcaatctcatcctacattctttcctaatcattattagacatcttcatgcactcaaaagcatctaaggttcaact 5304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 13340 - 13262
Alignment:
Q  123 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    |||| |||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  13340 caggctcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 13262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 32438 - 32520
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| | | | ||||| ||| ||||||||| | | |||||||||||||||| | |||||||| |||||    
T  32438 attccaggttcaatctcatcccacattctttcctagtcattattagacatgttcaggcactcaaaagcatctaaggttcaact 32520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 21275 - 21357
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||| ||||||||| ||| | |||||  |||||||||||| | | ||||||||||| |||||| |||||||| |||||    
T  21275 attccaggtacaatctcatcctacattctttcataatcattattagacatgttcaggcactaaaaaacatctaaggttcaact 21357  T

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Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 39666 - 39592
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 193  Q
    |||||||||||||||||||||| | ||||| |||||||||| || | | ||||||| |||||||| | |||||||    
T  39666 ttccaggttcaatctcattctacattctttcctaatcattaatagacatgttcaggtactcaaaagcatctaagg 39592  T

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Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 40242 - 40306
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 183  Q
    |||||||||||||||||| ||  | ||||| ||||||||||||| | | ||||||||||||||||    
T  40242 ttccaggttcaatctcatcctccattctttcctaatcattattagacatgttcaggcactcaaaa 40306  T

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Target: scaffold0141 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 39783 - 39832
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  39783 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 39832  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 75029 - 74980
Alignment:
Q  41 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  75029 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 74980  T

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Target: scaffold0309 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 6917 - 6965
Alignment:
Q  42 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 90  Q
    ||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  6917 tgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 6965  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 47360 - 47442
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtccaact 200  Q
    ||||||||||||||||||| ||| | || || ||||||||||||  ||||| ||||| ||||||||| | |||||||| |||||    
T  47360 attccaggttcaatctcatcctacattcattcctaatcattattagacata-ttcagacactcaaaagcatctaaggttcaact 47442  T

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Target: scaffold0042 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 24037 - 23973
Alignment:
Q  120 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 183  Q
    |||||||||||||||||| ||| | | ||| ||||||||||||| | | ||||||||||||||||    
T  24037 ttccaggttcaatctcatcctacattttttcctaatcattattagacatgttcaggcactcaaaa 23973  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 51953 - 52017
Alignment:
Q  119 attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaa 182  Q
    ||||||||||||||||| | ||| | ||||| ||||||||||||| | | |||||||||||||||    
T  51953 attccaggttcaatctcgtcctacattctttcctaatcattattagacttgttcaggcactcaaa 52017  T

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