View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19480_high_5 (Length: 288)
Name: NF19480_high_5
Description: NF19480
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19480_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 10 - 269
Target Start/End: Original strand, 11047528 - 11047787
Alignment:
| Q |
10 |
aagcaaagggaaatcacaatttaattacattgagcaggacgtgacatgagggtatgtgatagggaatctcatctataacattaatgtctaaaatatcata |
109 |
Q |
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| T |
11047528 |
aagcaaagagaaatcacaatttaattacattgagcaggacgtgacatgagggtatgtgatagggaatctcatctataacattaatgtctaaaatatcata |
11047627 |
T |
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| Q |
110 |
agaaaattcacatatgcatggttttattatacatatagtactactttttgttttggtgttagctcgcaaattttaatgctacgaaccaaattttgcttag |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11047628 |
agaaaattcacatatgcatggttttattatacatatagtactactttttgttttggtgttagctcgcaaattttaatgctacgaaccaaattttgcttag |
11047727 |
T |
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| Q |
210 |
atatggccatgacactatagtacgtaggtaaacaatttaagagtaataaagtgatgtacg |
269 |
Q |
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| T |
11047728 |
atatggccatgacactatagtacgtaggtaaacaatttaagagtaataaagtgatgtacg |
11047787 |
T |
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