View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19481_high_2 (Length: 540)

Name: NF19481_high_2
Description: NF19481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19481_high_2
NF19481_high_2
[»] chr3 (62 HSPs)
chr3 (19-531)||(19875807-19876320)
chr3 (19-493)||(31675495-31675970)
chr3 (19-493)||(31920453-31920927)
chr3 (56-500)||(40512818-40513263)
chr3 (158-531)||(14309276-14309655)
chr3 (56-422)||(34829994-34830361)
chr3 (19-461)||(55367174-55367616)
chr3 (234-416)||(2365058-2365240)
chr3 (201-506)||(53941993-53942298)
chr3 (234-416)||(19919407-19919589)
chr3 (234-416)||(34331993-34332175)
chr3 (234-392)||(962365-962523)
chr3 (235-385)||(48569232-48569382)
chr3 (234-332)||(16179720-16179818)
chr3 (30-218)||(18381633-18381814)
chr3 (241-393)||(6175678-6175830)
chr3 (234-323)||(19891457-19891546)
chr3 (199-320)||(36731638-36731759)
chr3 (234-365)||(23819345-23819476)
chr3 (234-365)||(43120903-43121034)
chr3 (234-392)||(17077499-17077657)
chr3 (234-332)||(12341517-12341615)
chr3 (237-323)||(30166594-30166680)
chr3 (235-365)||(50545024-50545154)
chr3 (235-316)||(24925963-24926044)
chr3 (258-338)||(16672277-16672357)
chr3 (258-338)||(52250381-52250461)
chr3 (235-326)||(52907310-52907401)
chr3 (265-335)||(8948278-8948348)
chr3 (265-335)||(20797918-20797988)
chr3 (19-105)||(25024334-25024420)
chr3 (262-367)||(17270969-17271074)
chr3 (264-393)||(22733672-22733801)
chr3 (235-335)||(46907929-46908029)
chr3 (23-146)||(14307776-14307899)
chr3 (250-332)||(46248460-46248543)
chr3 (258-344)||(7164292-7164378)
chr3 (235-305)||(14863745-14863815)
chr3 (259-357)||(17914471-17914569)
chr3 (235-305)||(21739777-21739847)
chr3 (258-308)||(48930530-48930580)
chr3 (19-105)||(52250615-52250700)
chr3 (19-105)||(53941867-53941953)
chr3 (19-108)||(48930290-48930379)
chr3 (235-303)||(15481049-15481117)
chr3 (258-305)||(6825616-6825663)
chr3 (265-335)||(20367359-20367429)
chr3 (45-131)||(42807259-42807345)
chr3 (274-371)||(8130793-8130890)
chr3 (262-335)||(44888712-44888785)
chr3 (262-322)||(47538075-47538135)
chr3 (246-305)||(18381840-18381899)
chr3 (59-146)||(30166793-30166880)
chr3 (265-335)||(1709613-1709683)
chr3 (56-126)||(6175947-6176017)
chr3 (19-105)||(6825386-6825472)
chr3 (239-293)||(23604148-23604202)
chr3 (235-305)||(36709690-36709760)
chr3 (29-99)||(46190066-46190136)
chr3 (244-305)||(42674727-42674788)
chr3 (36-105)||(48569529-48569598)
chr3 (241-305)||(10868431-10868495)
[»] chr6 (43 HSPs)
chr6 (19-380)||(19350508-19350870)
chr6 (19-493)||(32186247-32186722)
chr6 (19-225)||(29976377-29976584)
chr6 (19-521)||(25350786-25351290)
chr6 (19-493)||(14843238-14843713)
chr6 (56-421)||(14686181-14686547)
chr6 (158-422)||(26514428-26514693)
chr6 (234-506)||(26206113-26206385)
chr6 (234-416)||(2554385-2554567)
chr6 (234-323)||(17576988-17577077)
chr6 (156-305)||(502821-502970)
chr6 (234-334)||(24766674-24766774)
chr6 (234-332)||(13938498-13938596)
chr6 (235-332)||(21629384-21629481)
chr6 (236-392)||(15956178-15956334)
chr6 (191-323)||(18681845-18681977)
chr6 (235-332)||(17605596-17605693)
chr6 (262-393)||(15674640-15674771)
chr6 (234-367)||(10362927-10363059)
chr6 (171-365)||(33640634-33640828)
chr6 (239-326)||(649341-649428)
chr6 (19-102)||(10919957-10920040)
chr6 (235-305)||(13086324-13086394)
chr6 (267-385)||(29824777-29824895)
chr6 (180-225)||(13563305-13563350)
chr6 (19-108)||(34434824-34434913)
chr6 (234-326)||(11060130-11060222)
chr6 (262-305)||(13563219-13563262)
chr6 (19-110)||(18588913-18589004)
chr6 (56-126)||(23346936-23347006)
chr6 (239-304)||(17078357-17078422)
chr6 (235-327)||(1104214-1104306)
chr6 (241-293)||(11469360-11469412)
chr6 (235-303)||(21549628-21549696)
chr6 (19-66)||(10362697-10362744)
chr6 (19-117)||(1104425-1104523)
chr6 (265-335)||(24573864-24573934)
chr6 (265-334)||(17110395-17110464)
chr6 (91-124)||(23664031-23664064)
chr6 (237-290)||(34372240-34372293)
chr6 (256-292)||(2923632-2923668)
chr6 (238-338)||(12913599-12913699)
chr6 (78-126)||(13214853-13214901)
[»] chr7 (51 HSPs)
chr7 (19-379)||(27218337-27218698)
chr7 (234-416)||(4937306-4937488)
chr7 (190-392)||(17721371-17721573)
chr7 (170-396)||(33820757-33820983)
chr7 (234-393)||(29968754-29968913)
chr7 (234-371)||(11276471-11276608)
chr7 (239-356)||(22818955-22819072)
chr7 (19-226)||(39658755-39658964)
chr7 (235-365)||(45993357-45993487)
chr7 (19-304)||(19544694-19544978)
chr7 (19-291)||(34104041-34104314)
chr7 (244-316)||(36227429-36227501)
chr7 (258-338)||(41805015-41805095)
chr7 (262-393)||(13440866-13440997)
chr7 (235-305)||(19735299-19735369)
chr7 (19-81)||(23054485-23054547)
chr7 (234-328)||(45871543-45871637)
chr7 (246-355)||(4164831-4164940)
chr7 (244-305)||(23054259-23054320)
chr7 (246-355)||(34207122-34207231)
chr7 (235-392)||(41340330-41340487)
chr7 (19-107)||(8752884-8752972)
chr7 (234-326)||(34232481-34232573)
chr7 (235-323)||(46626603-46626691)
chr7 (235-294)||(31423375-31423434)
chr7 (274-371)||(45164770-45164867)
chr7 (86-126)||(17721266-17721306)
chr7 (258-338)||(25018558-25018638)
chr7 (19-66)||(25018847-25018894)
chr7 (244-303)||(29917010-29917069)
chr7 (265-335)||(34791936-34792004)
chr7 (30-69)||(41805284-41805323)
chr7 (235-305)||(4078058-4078128)
chr7 (56-126)||(13440654-13440724)
chr7 (19-89)||(20349527-20349597)
chr7 (262-344)||(28740185-28740267)
chr7 (262-335)||(17056337-17056410)
chr7 (235-304)||(18671952-18672021)
chr7 (274-334)||(6335652-6335712)
chr7 (26-126)||(23887654-23887754)
chr7 (26-126)||(23898830-23898930)
chr7 (19-69)||(11341360-11341410)
chr7 (235-305)||(18768189-18768259)
chr7 (88-130)||(28507007-28507049)
chr7 (262-303)||(2820012-2820053)
chr7 (237-338)||(17195272-17195373)
chr7 (262-303)||(39930887-39930928)
chr7 (276-332)||(20918783-20918839)
chr7 (313-385)||(23887832-23887904)
chr7 (244-304)||(28173273-28173333)
chr7 (86-126)||(29968605-29968645)
[»] chr1 (46 HSPs)
chr1 (19-508)||(28358454-28358945)
chr1 (19-493)||(3544202-3544677)
chr1 (19-506)||(19014070-19014560)
chr1 (19-452)||(1247728-1248162)
chr1 (56-392)||(5809182-5809519)
chr1 (168-385)||(20987869-20988085)
chr1 (234-416)||(6051383-6051565)
chr1 (56-413)||(13867021-13867372)
chr1 (19-347)||(40562805-40563134)
chr1 (56-393)||(32352513-32352849)
chr1 (234-393)||(35541814-35541973)
chr1 (241-392)||(47622279-47622430)
chr1 (262-506)||(5497894-5498138)
chr1 (268-393)||(51052695-51052820)
chr1 (19-225)||(38070396-38070602)
chr1 (235-392)||(20796441-20796598)
chr1 (258-335)||(45271045-45271122)
chr1 (262-393)||(48072627-48072758)
chr1 (235-365)||(25504221-25504351)
chr1 (19-208)||(52692035-52692225)
chr1 (235-392)||(39431067-39431224)
chr1 (235-326)||(19042904-19042995)
chr1 (262-392)||(26721441-26721571)
chr1 (60-225)||(45795880-45796046)
chr1 (235-392)||(49264167-49264324)
chr1 (262-326)||(17708866-17708930)
chr1 (265-335)||(33259961-33260031)
chr1 (265-335)||(33280120-33280190)
chr1 (19-102)||(27393442-27393525)
chr1 (277-335)||(27889548-27889606)
chr1 (262-335)||(22191041-22191114)
chr1 (19-108)||(45270805-45270894)
chr1 (239-359)||(3074529-3074649)
chr1 (265-332)||(36099745-36099812)
chr1 (265-355)||(27364947-27365037)
chr1 (56-126)||(48072900-48072970)
chr1 (235-304)||(7396010-7396079)
chr1 (262-335)||(21409049-21409122)
chr1 (265-326)||(30650287-30650348)
chr1 (239-304)||(10710494-10710558)
chr1 (235-335)||(23450886-23450986)
chr1 (265-326)||(42475166-42475227)
chr1 (246-323)||(48434942-48435019)
chr1 (30-130)||(33142678-33142778)
chr1 (238-338)||(34548017-34548117)
chr1 (237-293)||(43914135-43914191)
[»] chr4 (53 HSPs)
chr4 (19-499)||(9690986-9691468)
chr4 (234-416)||(23641769-23641951)
chr4 (234-416)||(23647427-23647609)
chr4 (20-493)||(2072105-2072579)
chr4 (234-416)||(47419584-47419766)
chr4 (234-393)||(1827741-1827900)
chr4 (234-416)||(19756047-19756229)
chr4 (234-416)||(19783577-19783759)
chr4 (56-332)||(43516010-43516287)
chr4 (59-379)||(19115040-19115361)
chr4 (234-393)||(29553002-29553161)
chr4 (56-393)||(23872678-23873015)
chr4 (235-393)||(48312875-48313033)
chr4 (262-393)||(55299429-55299560)
chr4 (235-309)||(54482445-54482519)
chr4 (235-332)||(19733250-19733347)
chr4 (239-365)||(34976726-34976852)
chr4 (235-335)||(19648476-19648576)
chr4 (234-297)||(15741000-15741063)
chr4 (30-309)||(55724992-55725271)
chr4 (237-323)||(7662579-7662665)
chr4 (235-389)||(8935855-8936009)
chr4 (241-393)||(20675822-20675974)
chr4 (246-367)||(38296497-38296618)
chr4 (234-392)||(42779030-42779188)
chr4 (235-305)||(42952820-42952890)
chr4 (278-371)||(40688905-40688998)
chr4 (262-393)||(2365814-2365944)
chr4 (262-365)||(10562553-10562656)
chr4 (246-344)||(19308837-19308935)
chr4 (274-335)||(17951503-17951564)
chr4 (274-335)||(29133683-29133744)
chr4 (275-384)||(55464091-55464200)
chr4 (241-321)||(11586456-11586536)
chr4 (239-326)||(53486197-53486284)
chr4 (262-304)||(20396390-20396432)
chr4 (56-126)||(20675623-20675693)
chr4 (235-305)||(26694709-26694779)
chr4 (56-126)||(55299213-55299283)
chr4 (274-335)||(17955356-17955417)
chr4 (258-343)||(29328032-29328117)
chr4 (246-334)||(19837927-19838015)
chr4 (33-69)||(38296284-38296320)
chr4 (265-323)||(3129247-3129305)
chr4 (278-344)||(12079164-12079230)
chr4 (56-105)||(3129479-3129528)
chr4 (274-371)||(19162392-19162489)
chr4 (239-292)||(29122722-29122775)
chr4 (51-116)||(32153567-32153632)
chr4 (238-338)||(37871997-37872097)
chr4 (18-66)||(40434248-40434296)
chr4 (259-307)||(41352546-41352594)
chr4 (56-108)||(55464360-55464412)
[»] chr2 (37 HSPs)
chr2 (19-493)||(6823975-6824448)
chr2 (158-493)||(33583529-33583863)
chr2 (239-393)||(13551367-13551521)
chr2 (169-373)||(11197066-11197271)
chr2 (236-391)||(15018459-15018614)
chr2 (235-393)||(12646331-12646489)
chr2 (258-338)||(26147019-26147099)
chr2 (235-320)||(33515467-33515552)
chr2 (241-365)||(28253516-28253640)
chr2 (234-316)||(14440524-14440606)
chr2 (237-323)||(45422303-45422389)
chr2 (234-365)||(25380622-25380754)
chr2 (265-335)||(10289325-10289395)
chr2 (246-355)||(3153058-3153167)
chr2 (235-335)||(22724698-22724798)
chr2 (258-338)||(43311063-43311143)
chr2 (260-338)||(10689344-10689422)
chr2 (265-355)||(20946828-20946918)
chr2 (235-304)||(8065551-8065620)
chr2 (274-335)||(12807410-12807471)
chr2 (235-392)||(28399752-28399909)
chr2 (258-338)||(43722282-43722362)
chr2 (277-331)||(2282605-2282659)
chr2 (235-317)||(9668283-9668365)
chr2 (235-305)||(11233778-11233848)
chr2 (19-105)||(26146779-26146865)
chr2 (235-305)||(35488619-35488689)
chr2 (274-371)||(13416506-13416603)
chr2 (248-305)||(34357602-34357659)
chr2 (30-105)||(12646096-12646171)
chr2 (262-321)||(20004753-20004812)
chr2 (19-66)||(43310823-43310870)
chr2 (19-81)||(7301237-7301299)
chr2 (262-371)||(44028436-44028545)
chr2 (274-355)||(44940451-44940532)
chr2 (274-418)||(2206998-2207142)
chr2 (262-334)||(18669477-18669549)
[»] chr5 (56 HSPs)
chr5 (23-461)||(42259848-42260289)
chr5 (234-416)||(42514500-42514682)
chr5 (19-490)||(380465-380937)
chr5 (234-416)||(30731492-30731674)
chr5 (234-393)||(28534877-28535036)
chr5 (234-416)||(23239163-23239345)
chr5 (235-393)||(27796265-27796423)
chr5 (39-338)||(22174252-22174550)
chr5 (234-334)||(35983051-35983151)
chr5 (19-117)||(476777-476875)
chr5 (235-393)||(22094450-22094608)
chr5 (234-307)||(8299469-8299542)
chr5 (258-344)||(21084685-21084771)
chr5 (234-344)||(25856689-25856799)
chr5 (235-393)||(30509224-30509382)
chr5 (235-393)||(30549567-30549725)
chr5 (237-385)||(29572079-29572227)
chr5 (237-385)||(29573456-29573604)
chr5 (237-385)||(29574833-29574981)
chr5 (237-385)||(29576210-29576358)
chr5 (237-385)||(29577587-29577735)
chr5 (237-385)||(29578964-29579112)
chr5 (234-321)||(33170438-33170525)
chr5 (262-335)||(6050048-6050121)
chr5 (234-303)||(10780981-10781050)
chr5 (235-316)||(35121966-35122047)
chr5 (268-332)||(33385235-33385299)
chr5 (258-338)||(41590893-41590973)
chr5 (235-521)||(19506779-19507065)
chr5 (262-392)||(20207922-20208052)
chr5 (340-422)||(22172311-22172393)
chr5 (56-301)||(34481549-34481795)
chr5 (274-371)||(36256595-36256692)
chr5 (258-338)||(4297565-4297645)
chr5 (262-321)||(26261591-26261650)
chr5 (33-79)||(42039221-42039267)
chr5 (234-328)||(22437998-22438092)
chr5 (86-136)||(35983250-35983300)
chr5 (235-305)||(38358248-38358318)
chr5 (246-359)||(588299-588412)
chr5 (258-323)||(10486173-10486238)
chr5 (237-293)||(478946-479002)
chr5 (237-293)||(15829883-15829939)
chr5 (86-126)||(31642142-31642182)
chr5 (19-66)||(4297838-4297885)
chr5 (19-78)||(15862194-15862253)
chr5 (279-334)||(19838390-19838445)
chr5 (265-316)||(26659800-26659851)
chr5 (265-316)||(26931392-26931443)
chr5 (19-66)||(41590660-41590707)
chr5 (295-393)||(1821309-1821407)
chr5 (262-300)||(6885721-6885759)
chr5 (61-146)||(30509496-30509581)
chr5 (61-146)||(30549836-30549921)
chr5 (237-305)||(15861974-15862042)
chr5 (86-126)||(28535145-28535184)
[»] chr8 (48 HSPs)
chr8 (19-422)||(25193652-25194056)
chr8 (234-416)||(7925166-7925348)
chr8 (19-461)||(29721044-29721486)
chr8 (56-392)||(6245683-6246022)
chr8 (234-392)||(9923381-9923539)
chr8 (168-335)||(15539771-15539938)
chr8 (19-293)||(36025085-36025360)
chr8 (234-416)||(41664546-41664728)
chr8 (234-393)||(8300583-8300742)
chr8 (234-393)||(13878688-13878847)
chr8 (235-393)||(32267335-32267493)
chr8 (58-323)||(7452955-7453221)
chr8 (171-365)||(4987294-4987488)
chr8 (234-332)||(17700260-17700358)
chr8 (234-321)||(20825079-20825167)
chr8 (235-305)||(36157935-36158005)
chr8 (19-226)||(12341131-12341339)
chr8 (258-338)||(36493185-36493265)
chr8 (262-392)||(26774449-26774579)
chr8 (235-392)||(23942868-23943025)
chr8 (235-392)||(43612387-43612544)
chr8 (159-284)||(37165431-37165556)
chr8 (235-305)||(24794501-24794571)
chr8 (264-393)||(5585751-5585880)
chr8 (258-335)||(12332652-12332729)
chr8 (241-365)||(16375332-16375456)
chr8 (235-317)||(6901718-6901800)
chr8 (235-305)||(11393620-11393690)
chr8 (19-68)||(12332412-12332461)
chr8 (19-108)||(15439681-15439770)
chr8 (19-108)||(15530985-15531074)
chr8 (262-335)||(45255099-45255172)
chr8 (234-310)||(42176841-42176917)
chr8 (239-326)||(17659626-17659713)
chr8 (262-332)||(10530468-10530538)
chr8 (19-105)||(36492945-36493031)
chr8 (266-331)||(18187957-18188022)
chr8 (237-293)||(8445596-8445652)
chr8 (86-126)||(9923232-9923272)
chr8 (235-359)||(43611426-43611550)
chr8 (244-303)||(12135013-12135072)
chr8 (235-298)||(43249100-43249163)
chr8 (19-117)||(18187710-18187808)
chr8 (234-303)||(4991987-4992056)
chr8 (262-303)||(28992510-28992551)
chr8 (86-119)||(32267185-32267218)
chr8 (237-293)||(14490512-14490568)
chr8 (246-334)||(41691020-41691108)
[»] scaffold0034 (1 HSPs)
scaffold0034 (234-416)||(105021-105203)
[»] scaffold0189 (2 HSPs)
scaffold0189 (163-396)||(6800-7033)
scaffold0189 (19-99)||(6652-6732)
[»] scaffold0048 (1 HSPs)
scaffold0048 (19-458)||(63436-63875)
[»] scaffold0043 (1 HSPs)
scaffold0043 (19-273)||(33930-34185)
[»] scaffold0472 (1 HSPs)
scaffold0472 (234-393)||(4032-4191)
[»] scaffold1350 (1 HSPs)
scaffold1350 (190-393)||(280-483)
[»] scaffold0016 (2 HSPs)
scaffold0016 (258-338)||(28578-28658)
scaffold0016 (19-105)||(28338-28424)
[»] scaffold0418 (1 HSPs)
scaffold0418 (237-323)||(8387-8473)
[»] scaffold0179 (2 HSPs)
scaffold0179 (262-392)||(8340-8470)
scaffold0179 (262-392)||(13274-13404)
[»] scaffold0026 (1 HSPs)
scaffold0026 (19-100)||(67644-67725)
[»] scaffold0007 (1 HSPs)
scaffold0007 (262-393)||(182923-183054)
[»] scaffold0131 (1 HSPs)
scaffold0131 (258-323)||(3819-3884)
[»] scaffold0061 (2 HSPs)
scaffold0061 (258-338)||(55469-55549)
scaffold0061 (30-66)||(55237-55273)
[»] scaffold0017 (2 HSPs)
scaffold0017 (258-338)||(143084-143164)
scaffold0017 (30-66)||(143361-143397)
[»] scaffold0112 (1 HSPs)
scaffold0112 (244-305)||(14950-15011)
[»] scaffold1809 (1 HSPs)
scaffold1809 (262-301)||(1093-1132)
[»] scaffold0094 (1 HSPs)
scaffold0094 (265-323)||(26111-26169)
[»] scaffold0019 (1 HSPs)
scaffold0019 (259-329)||(48923-48993)


Alignment Details
Target: chr3 (Bit Score: 405; Significance: 0; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 19 - 531
Target Start/End: Original strand, 19875807 - 19876320
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19875807 caacctccttgcctcctcaccatatctcgccaccaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttactcatcaaagct 19875906  T
Q  119 aaattaaattcttgcaactacctcaccct-agacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
    |||||||||||  |||||  ||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19875907 aaattaaattcccgcaacagcctcacccccagacctccaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 19876006  T
Q  218 tacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcag 317  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19876007 tacctcgccaaaaaaatttattaaacaaagattcaatgagagaaattatacctgacggagatttgaagaaggaaagtgcatagacaggaagcgaagtcag 19876106  T
Q  318 gacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaa 417  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19876107 gacagacttaagaagaaccaagcgacccccgaaagatagaaaacaactttgccaccccgacaatctagttttaatagtagacaccacaggttcccaaaaa 19876206  T
Q  418 gctaattttctaggatcaccgccaatagagagaccaagatacaagaacggagttttgcccactttacaatttaaaactgatgcagcctctaacaaccacg 517  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19876207 gctaattttctaggatcaccgccaatagatagaccaagatataagaacagaattttgcccactttacaatttaaaactgatgcagcctctaacaaccacg 19876306  T
Q  518 actctccagtatta 531  Q
    |||||||| |||||    
T  19876307 actctccaatatta 19876320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 19 - 493
Target Start/End: Original strand, 31675495 - 31675970
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    |||||||||||||||||||||||||||| ||| || ||||||||||||||| ||||||||||| | |||||  ||||||||||||||||| | ||||||     
T  31675495 caacctccctgcctcctcaccatatctcaccaccagcaccctataccaaaaaccacctctatccaccaacattcgccaacaccatttacctaacaaagca 31675594  T
Q  119 aaattaaattcttgcaactacctcaccc-tagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
       ||||| ||   |||||  ||||||| ||  |||  | ||||||||  ||||||||||||| | ||||||| |||||| |||||||||||||||||||    
T  31675595 tggttaaactccctcaactgtctcacccctaaccctccatactcctttcgtaaacaaacagagtttcaagcgacccaggagattttcctgttatcctcac 31675694  T
Q  218 tacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcag 317  Q
    | ||||||          ||||||| | ||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||| |  || |||||    
T  31675695 tccctcccaaaaaaaaaatattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcag 31675794  T
Q  318 gacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaa 417  Q
    ||||||||| || ||||| || |||||||| ||||| ||||| ||| ||||||||||||| |||||||  ||||| ||   || |||||| ||||||||     
T  31675795 gacagacttgagtagaaccaaccgacccccaaaagagagaaagcgattttgccaccccgataatctagacttaatggtcttcaacacaggctcccaaaat 31675894  T
Q  418 gctaattttctaggatcaccgccaatagagagaccaagatacaagaacggagttttgcccactttacaatttaaaa 493  Q
    |||||  |  | |||||||| |||||||| ||||| |||||||| || |||| ||| || ||||| ||||| ||||    
T  31675895 gctaacctcttcggatcaccaccaatagaaagacccagatacaaaaatggagctttaccaactttgcaattcaaaa 31675970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 19 - 493
Target Start/End: Complemental strand, 31920927 - 31920453
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    |||||||||||||||||||||||||||| ||| || ||||||||||||||| ||||||||||| | |||||  ||||||||||||||||| | ||||||     
T  31920927 caacctccctgcctcctcaccatatctcaccaccagcaccctataccaaaaaccacctctatccaccaacattcgccaacaccatttacctaacaaagca 31920828  T
Q  119 aaattaaattcttgcaactacctcac-cctagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
       ||||| ||   |||||  ||||| ||||  |||  | ||||||||  ||||||||||||| | ||||||| |||||| |||||||||||||||||||    
T  31920827 tggttaaactccctcaactgtctcactcctaaccctccatactcctttcgtaaacaaacagagtttcaagcgacccaggagattttcctgttatcctcac 31920728  T
Q  218 tacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcag 317  Q
    | ||||||        ||||||||| | ||||||||||| ||| ||||||| ||||| |||||||||||||||||| ||||||||||| |  || |||||    
T  31920727 tccctccc-aaatttttttattaaaaatagattcaatgacagagattatacttgacgaagctttgaagaaggaaagggcatagacaggcaatgaggtcag 31920629  T
Q  318 gacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaa 417  Q
    ||||||||| || ||||| || |||||||| ||||| ||||| ||| ||||||||||||| |||||||  ||||| ||   || |||||| ||||||||     
T  31920628 gacagacttgagtagaaccaaccgacccccaaaagagagaaagcgattttgccaccccgataatctagacttaatggtcttcaacacaggctcccaaaat 31920529  T
Q  418 gctaattttctaggatcaccgccaatagagagaccaagatacaagaacggagttttgcccactttacaatttaaaa 493  Q
    |||||  |  | |||||||| |||||||| ||||| | |||||| || |||| ||| || ||||| ||||| ||||    
T  31920528 gctaacctcttcggatcaccaccaatagaaagacccaaatacaaaaatggagctttaccaactttgcaattcaaaa 31920453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 56 - 500
Target Start/End: Complemental strand, 40513263 - 40512818
Alignment:
Q  56 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattcttgcaactacctcaccct-agacctt 154  Q
    ||||||||||| || ||||||||||| | ||||| |||||||||||||||||| | ||||||   |||||| || ||||||| ||||||||  | |||      
T  40513263 accctataccataaaccacctctatccaccaacatccgccaacaccatttacctaacaaagcactattaaaatcctgcaacttcctcacccccaaacccc 40513164  T
Q  155 taaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaat 254  Q
     | |||||||   ||| ||||||||||||||||| | |||||||||||||||||| |||||||| |||||||       ||||||||| | |||||||||    
T  40513163 catactccttacgtaagcaaacagagctccaagctacccaggaaattttcctgttttcctcactccctccccaaaaaaatttattaaaaagagattcaat 40513064  T
Q  255 gagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagat 354  Q
    || ||| ||||||||||||||||| |||||||||||||| ||||||||||| |  | ||||||||||||||||||||| || || ||||| || |||||     
T  40513063 gatagagattatacctgacggagccttgaagaaggaaagagcatagacaggtaatgcagtcaggacagacttaagaaggaccaaccgacctccaaaagag 40512964  T
Q  355 agaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaagctaattttctaggatcaccgccaatagagagaccaa 454  Q
    ||||||||||||||||||||| ||| ||||| |||||| ||  ||| |||||  ||||| || |||||| | || |||||||| || || || | ||| |    
T  40512963 agaaaacgactttgccaccccaacagtctagatttaattgtttgcaacacagaatcccagaatgctaatctccttggatcaccacctatcgataaaccca 40512864  T
Q  455 gatacaagaacggagttttgcccactttacaatttaaaactgatgc 500  Q
    ||||||  || ||| | || || || ||||||||||||| ||||||    
T  40512863 gatacacaaaaggaatcttcccaaccttacaatttaaaattgatgc 40512818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 158 - 531
Target Start/End: Original strand, 14309276 - 14309655
Alignment:
Q  158 actccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaa---------aga 248  Q
    ||||||||| |||||||| |||||||||||| ||| ||||||||||||||||||||||||| |||||||          |||||| ||         |||    
T  14309276 actccttttgtaaacaaatagagctccaagcaatctaggaaattttcctgttatcctcactccctccccaaaaaaaa--attaaaaaatagattaataga 14309373  T
Q  249 ttcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccg 348  Q
    |||||| |||||||| ||||||||||||||| ||||||||||||| ||||||||| ||||||| ||||||||||| || || |||||||| || ||||||    
T  14309374 ttcaataagagaaatgatacctgacggagctatgaagaaggaaagagcatagacaagaagcgaggtcaggacagatttgaggagaactaatcggcccccg 14309473  T
Q  349 aaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaagctaattttctaggatcaccgccaatagaga 448  Q
    ||||||| ||| |||||||||||||||| |||||||| ||||||| ||| ||||||||||||||||||| ||||| | | ||| ||||| ||||| || |    
T  14309474 aaagataaaaagcgactttgccaccccgccaatctagatttaatattagacaccacaggttcccaaaaaactaatatgcgagggtcacctccaattgaca 14309573  T
Q  449 gaccaagatacaagaacggagttttgcccactttacaatttaaaactgatgcagcctctaacaaccacgactctccagtatta 531  Q
     || |||||||||||||||  |||| ||||||||||  |||||||   | || ||||||| ||||||||| || ||| |||||    
T  14309574 aactaagatacaagaacggtatttt-cccactttactgtttaaaataaaagctgcctctatcaaccacgagtccccaatatta 14309655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 56 - 422
Target Start/End: Original strand, 34829994 - 34830361
Alignment:
Q  56 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattcttgcaactacctcaccctagaccttt 155  Q
    ||||||||||| |||||| || |||| | ||||| |||||||||||||||||| | ||||||   ||||||||| ||||||| ||||||||   ||| |     
T  34829994 accctataccataacccaactatatccaccaacatccgccaacaccatttacctaacaaagcactattaaattcatgcaacttcctcacccccaaccctc 34830093  T
Q  156 aa-actccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaat 254  Q
     | |||||||   ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||        || |||||| | |||||||||    
T  34830094 catactccttacgtaaacaaacagagctccaagcaatccaggaaattttcctgttatcctcactccctcccaaaaaaaatt-attaaaaatagattcaat 34830192  T
Q  255 gagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccga-aaga 353  Q
    |  ||| |||||||||||||||||   |||||||||||| ||||||||||| | |   |||||||||||||||||||| || || |||||||| | ||||    
T  34830193 ggcagagattatacctgacggagccaggaagaaggaaagagcatagacaggtaacacggtcaggacagacttaagaaggaccaaccgaccccccataaga 34830292  T
Q  354 tagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaagctaa 422  Q
     ||||||||||||||||||||||||||||||| |||||| |||  || ||| |||||||| || |||||    
T  34830293 gagaaaacgactttgccaccccgacaatctagatttaatggtattcatcactggttcccagaatgctaa 34830361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 19 - 461
Target Start/End: Original strand, 55367174 - 55367616
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    ||||||| |||||||||||||||||||||| | ||| ||| ||||||| |||||||||||||| |  |||| || |||||||||||| || | ||| ||     
T  55367174 caacctctctgcctcctcaccatatctcgctaacaaaaccttataccacaacccacctctatcaactaacatcctccaacaccattttcctaacaacgca 55367273  T
Q  119 aaattaaattcttgcaactacctcaccctagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcact 218  Q
    | ||||||||| | ||||| ||||||||   |||   | ||||||||  | |||||| | |  |||||||||||||||||||||||||||| ||||||||    
T  55367274 agattaaattccttcaacttcctcacccccaacccccatactcctttcgtgaacaaatataattccaagcgatccaggaaattttcctgttgtcctcact 55367373  T
Q  219 acctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcagg 318  Q
     |||||||         | |||||||||||||| |||  ||| ||||||||||||| ||||||||| |||||||| || |||||| | |  || | ||||    
T  55367374 ccctccccaaaaaaacattttaaacaaagattctatggaagagattatacctgacgcagctttgaaaaaggaaagagcgtagacaagcaaagaggacagg 55367473  T
Q  319 acagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaag 418  Q
    |||||||| |  | ||| || || || ||||| || ||||||||||| |||||||| |||||||||| |||||| ||| ||| |||||| |||||||| |    
T  55367474 acagacttgatcaaaaccaatcggcctccgaatgagagaaaacgactctgccacccggacaatctagatttaatggtatgcaacacagggtcccaaaatg 55367573  T
Q  419 ctaattttctaggatcaccgccaatagagagaccaagatacaa 461  Q
    ||| ||| | ||| ||||| ||||| || || |||||||||||    
T  55367574 ctagtttccgagggtcaccaccaatcgataggccaagatacaa 55367616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 234 - 416
Target Start/End: Original strand, 2365058 - 2365240
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||||||| ||||||    
T  2365058 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 2365157  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaa 416  Q
    |  || ||||| ||||||||||| || ||||||||||| || |||||||||| |||||||  |  ||||||||||||||||||    
T  2365158 atcaaacgaccaccgaaagataggaaccgactttgccaaccagacaatctagatttaatacgatccaccacaggttcccaaaa 2365240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 201 - 506
Target Start/End: Original strand, 53941993 - 53942298
Alignment:
Q  201 tttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatag 300  Q
    |||| ||||||||||||| |||||||       ||||||||| | ||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||    
T  53941993 tttcatgttatcctcactccctccccaaaattttttattaaaaatagattcaatgatagagattatacctgacggagctttgaagaaggaaagagcatag 53942092  T
Q  301 acaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggca 400  Q
    ||| ||||||| |||| ||||||||| | ||| || || ||||| ||  | |||||||| ||||| ||||||||||||||||| |  ||||| ||| |||    
T  53942093 acaagaagcgaggtcaagacagactttaaaaggaccaaccgaccaccataggatagaaagcgactctgccaccccgacaatctggacttaattgtatgca 53942192  T
Q  401 ccacaggttcccaaaaagctaattttctaggatcaccgccaatagagagaccaagatacaagaacggagttttgcccactttacaatttaaaactgatgc 500  Q
     |||||| ||||| || |||||     | |||| ||| |||||||| ||||| |||||||| || ||| | |||||||| ||||| ||||||| ||| ||    
T  53942193 acacaggatcccagaatgctaaccgattcggattaccaccaatagaaagacccagatacaaaaaaggaatcttgcccaccttacagtttaaaattgaggc 53942292  T
Q  501 agcctc 506  Q
     |||||    
T  53942293 cgcctc 53942298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 234 - 416
Target Start/End: Complemental strand, 19919589 - 19919407
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||| || | ||| |||||  |||| || |||    
T  19919589 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagttaggacgaactttagtaga 19919490  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaa 416  Q
    |  || ||||| |||||||||||||| ||||||||||| || |||||||||| |||||||  |   |||||||||||||||||    
T  19919489 atcaaacgaccaccgaaagatagaaaccgactttgccaaccagacaatctagatttaatacgatctaccacaggttcccaaaa 19919407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 234 - 416
Target Start/End: Complemental strand, 34332175 - 34331993
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||||| || |||||||||||||||||||| || | ||||||||||||||| || |||    
T  34332175 tttattaaacaaagattcaatggaagagattatacctgacggagctttaaaaaaggaaagtgcatagacaggtagagcagtcaggacagactttagtaga 34332076  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaa 416  Q
    |  || ||||| |||||||| || || ||||||||||| || |||||||||| |||||||  |  ||| ||||||||||||||    
T  34332075 atcaaacgaccaccgaaagaaaggaaccgactttgccaaccagacaatctagatttaatacgattcacaacaggttcccaaaa 34331993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 234 - 392
Target Start/End: Complemental strand, 962523 - 962365
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    |||||| |||||||||||||||  ||| ||||||||||||||||||||||| |||||||| |||||||||||||| | |||||||||||| || |||||     
T  962523 tttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacaggaagtgcagtcaggacagatttgagaagg 962424  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaat 392  Q
    |  || || || || ||||| || || ||||| ||||| || |||||||||| ||||||    
T  962423 atcaaccggccaccaaaagaaaggaaccgactatgccaaccagacaatctagctttaat 962365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 235 - 385
Target Start/End: Complemental strand, 48569382 - 48569232
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    ||||| |||||||||||||||  ||| ||||||||||| ||||||||||| ||||||||||||||||||||||| | ||||||||| || || |||||||    
T  48569382 ttatttaacaaagattcaatggaagagattatacctgatggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacggatttgagaagaa 48569283  T
Q  335 ctaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctag 385  Q
      || ||||| || ||||| || || ||||| ||||| || ||||||||||    
T  48569282 tcaaacgaccaccaaaagaaaggaaccgactatgccaaccagacaatctag 48569232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 332
Target Start/End: Original strand, 16179720 - 16179818
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaag 332  Q
    |||||| |||||||||||||||  ||| |||||||||||| |||||||||| ||||||||||||||||||||||| | | |||||||||| || |||||    
T  16179720 tttatttaacaaagattcaatggaagagattatacctgacagagctttgaaaaaggaaagtgcatagacaggaagtgcaatcaggacagatttgagaag 16179818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 218
Target Start/End: Original strand, 18381633 - 18381814
Alignment:
Q  30 cctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattc 129  Q
    |||| |||||||||||||||| ||| |||| |||||| ||||| |||||||| | |||||  | ||||||||| ||||| | ||||||||||||||| ||    
T  18381633 cctcgtcaccatatctcgccaccaaaacccaataccataaccctcctctatcaaccaacattctccaacaccacttacctagcaaagctaaattaaagtc 18381732  T
Q  130 ttgcaactacctcaccctagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcact 218  Q
    |  |||||  |||||||        || ||||||||    |||||||| |||||||||||||||||||||||||||| |||||||||||    
T  18381733 tctcaactgtctcaccc-------ctatactcctttcgagaacaaacatagctccaagcgatccaggaaattttcctattatcctcact 18381814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 241 - 393
Target Start/End: Complemental strand, 6175830 - 6175678
Alignment:
Q  241 aacaaagattcaatgagagaa-attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaag 339  Q
    |||||||||||||| |||| | ||||||||||  |||| ||||||||||||||||||||||||||| || || |||| |||||| || || ||||| |||    
T  6175830 aacaaagattcaat-agaggagattatacctgttggagttttgaagaaggaaagtgcatagacaggcagagatgtcaagacagatttgagtagaaccaag 6175732  T
Q  340 cgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaata 393  Q
    ||||| || ||||| ||||| ||||| | ||| ||||||| ||||| |||||||    
T  6175731 cgaccaccaaaagagagaaaccgactattccaacccgacagtctagatttaata 6175678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 234 - 323
Target Start/End: Original strand, 19891457 - 19891546
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacaga 323  Q
    |||||| |||||||||||||||  ||| ||||||||||||||||||||||| ||||||||| |||| |||||||||| ||||| ||||||    
T  19891457 tttatttaacaaagattcaatggaagatattatacctgacggagctttgaaaaaggaaagttcataaacaggaagcgcagtcaagacaga 19891546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 199 - 320
Target Start/End: Original strand, 36731638 - 36731759
Alignment:
Q  199 attttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcat 298  Q
    |||||||| ||||||||||| || ||||       |||||| |||||||||||||||  ||| ||||||||||||||||||||||| |||||||| ||||    
T  36731638 attttcctattatcctcacttcccccccccaaaaatttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcat 36731737  T
Q  299 agacaggaagcgaagtcaggac 320  Q
    ||| |||||| | |||||||||    
T  36731738 agataggaagtgcagtcaggac 36731759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 365
Target Start/End: Original strand, 23819345 - 23819476
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    |||| |||||||||||||||||  ||| ||||||| ||| |||||||||||||||||||| ||||| ||||| || || |||||||||||||| |  |||    
T  23819345 tttaataaacaaagattcaatggaagagattatacttgatggagctttgaagaaggaaagcgcatatacaggcagagaggtcaggacagactttaagaga 23819444  T
Q  334 actaagcgacccccgaaagatagaaaacgact 365  Q
    || | |||||| || |||||||  ||||||||    
T  23819445 accatgcgaccaccaaaagataagaaacgact 23819476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 365
Target Start/End: Complemental strand, 43121034 - 43120903
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| ||||||||| | |||||||||||||||||||  ||||||||||  || || ||||||||||| || | ||||    
T  43121034 tttattaaacaaagattcaatggaagagattatacctaatggagctttgaagaaggaaaacgcatagacagacagagaggtcaggacagattttaaaaga 43120935  T
Q  334 actaagcgacccccgaaagatagaaaacgact 365  Q
    || | |||||| || |||||||  ||||||||    
T  43120934 accaggcgaccgccaaaagataagaaacgact 43120903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 234 - 392
Target Start/End: Complemental strand, 17077657 - 17077499
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    |||||| |||||||||||||||  ||| |||||||||||| |||||||||| |||||||||||||||||| |||| | | | |||||| | || |||||     
T  17077657 tttattcaacaaagattcaatggaagagattatacctgacagagctttgaaaaaggaaagtgcatagacatgaagtgcaattaggacaaatttgagaagg 17077558  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaat 392  Q
    |  || ||||| |  ||||| || || ||||| ||||| || |||||||||||||||||    
T  17077557 atcaaacgaccactaaaagaaaggaaccgactatgccaaccagacaatctagttttaat 17077499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 234 - 332
Target Start/End: Complemental strand, 12341615 - 12341517
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaag 332  Q
    |||||| ||||||||||||||   ||| |||||||| ||||||||||| || |||||||||| |||||||||||||| ||||| |||||| || |||||    
T  12341615 tttatttaacaaagattcaatagaagagattatacccgacggagctttaaaaaaggaaagtgtatagacaggaagcgcagtcaagacagatttgagaag 12341517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 323
Target Start/End: Complemental strand, 30166680 - 30166594
Alignment:
Q  237 attaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacaga 323  Q
    |||||| |||||||||| |  ||||||||||||||| |||||||||||||| ||||| ||||||||||| || ||||||| ||||||    
T  30166680 attaaataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 30166594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 365
Target Start/End: Original strand, 50545024 - 50545154
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    |||||||| ||||||||||||  ||| ||||||||||| ||| |||||||||||||||  |||||||| || || || |||||||||||||| | |||||    
T  50545024 ttattaaataaagattcaatggaagagattatacctgatggacctttgaagaaggaaaacgcatagacgggtagagaggtcaggacagactttaaaagaa 50545123  T
Q  335 ctaagcgacccccgaaagatagaaaacgact 365  Q
    | |  || || || ||||||| |||||||||    
T  50545124 ccagacggccgccaaaagataaaaaacgact 50545154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 235 - 316
Target Start/End: Complemental strand, 24926044 - 24925963
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtca 316  Q
    ||||| || ||||||||||||  ||| ||||||||||| |||||||||||||| ||||||||||||||||| || |||||||    
T  24926044 ttatttaataaagattcaatggaagagattatacctgatggagctttgaagaaagaaagtgcatagacaggcagagaagtca 24925963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 16672357 - 16672277
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaa 338  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||| || || |||| ||||||||| || ||||||||    
T  16672357 agaaattatacctgacggagccttgaagaaggaaagaacatagacaggtagagaggtcaagacagactttaggagaactaa 16672277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 52250461 - 52250381
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaa 338  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||| || || |||| |||| |||| || ||||||||    
T  52250461 agaaattatacctgacggagccttgaagaaggaaagcgcatagacaggtagagaggtcaagacaaactttaggagaactaa 52250381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 235 - 326
Target Start/End: Complemental strand, 52907401 - 52907310
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagactt 326  Q
    |||||||||| |||||||||   ||| ||||||||||| |||||||||||||||||||| ||||| ||||| || |||| || |||||||||    
T  52907401 ttattaaacatagattcaatagaagagattatacctgatggagctttgaagaaggaaagggcataaacaggtagagaagacatgacagactt 52907310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 8948348 - 8948278
Alignment:
Q  265 atacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    |||||||| |||||||||||||||||||  ||||||||||| || || ||||||||| |||||||||||||    
T  8948348 atacctgagggagctttgaagaaggaaatagcatagacagggagagaggtcaggacaaacttaagaagaac 8948278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 20797918 - 20797988
Alignment:
Q  265 atacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    |||||||| |||||||||||||||||||  ||||||||||||||||| |||||  |||||||||| |||||    
T  20797918 atacctgagggagctttgaagaaggaaaaagcatagacaggaagcgaggtcagtgcagacttaaggagaac 20797988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 25024420 - 25024334
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccattt 105  Q
    ||||||||||||||||||||||||||| ||   |||||||||||||||||| ||| ||||||| |  |||| || ||||||||||||    
T  25024420 caacctccctgcctcctcaccatatctagcttccaacaccctataccaaaaaccatctctatccactaacatcctccaacaccattt 25024334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 367
Target Start/End: Complemental strand, 17271074 - 17270969
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaac 361  Q
    |||||||||||| || ||||||| ||| |||| || |||||| |||| || |||||||||||||| |||| ||  || |||||||| ||||| |||||||    
T  17271074 attatacctgacagaactttgaaaaagaaaagagcgtagacatgaagagaggtcaggacagacttcagaaaaatcaaacgacccccaaaagagagaaaac 17270975  T
Q  362 gacttt 367  Q
    ||||||    
T  17270974 gacttt 17270969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 22733801 - 22733672
Alignment:
Q  264 tatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacga 363  Q
    ||||| ||| ||||| ||||||||||| || |||||||||||||| | ||| ||||| ||||| |||||||| |||||||| ||||  ||  |||| |      
T  22733801 tatacatgatggagccttgaagaaggacagagcatagacaggaagtgcagttaggacggacttcagaagaaccaagcgaccaccgatggagggaaaccag 22733702  T
Q  364 ctttgccaccccgacaatctagttttaata 393  Q
    ||||||||  | ||||||||||||||||||    
T  22733701 ctttgccaaacagacaatctagttttaata 22733672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 235 - 335
Target Start/End: Complemental strand, 46908029 - 46907929
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    ||||| || ||||||||||||  ||| ||||||| ||| |||||||||||||||||||| ||||||| ||| || || ||||| |||||||| | |||||    
T  46908029 ttatttaataaagattcaatggaagagattatacttgatggagctttgaagaaggaaagagcatagataggcagagaggtcagaacagactttaaaagaa 46907930  T
Q  335 c 335  Q
    |    
T  46907929 c 46907929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 146
Target Start/End: Original strand, 14307776 - 14307899
Alignment:
Q  23 ctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaat 122  Q
    |||||||||||||||||||||||||||  ||| || ||| |||| |||||  ||||||| |  ||||  | |||||||||||| || | |||||||||||    
T  14307776 ctccctgcctcctcaccatatctcgccgccaatactctacaccagaaccccgctctatccacgaacattctccaacaccattttcctaacaaagctaaat 14307875  T
Q  123 taaattcttgcaactacctcaccc 146  Q
    ||||||| | | ||| ||||||||    
T  14307876 taaattcctaccactgcctcaccc 14307899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 332
Target Start/End: Complemental strand, 46248543 - 46248460
Alignment:
Q  250 tcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacag-gaagcgaagtcaggacagacttaagaag 332  Q
    |||| ||||||||| ||| ||||||||| |||||||||||||| || |||||||| ||||||  ||||||||||| ||||||||    
T  46248543 tcaacgagagaaatgatatctgacggagttttgaagaaggaaaatgtatagacagagaagcgcggtcaggacagatttaagaag 46248460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 344
Target Start/End: Original strand, 7164292 - 7164378
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacc 344  Q
    ||||||||||||||| |||||  ||||||||||||| ||||| | |||||| || |||| |||| |||| ||||||||||| |||||    
T  7164292 agaaattatacctgatggagccctgaagaaggaaagagcataaataggaagagaggtcaagacaaactttagaagaactaaccgacc 7164378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 14863815 - 14863745
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||| |||||||||||||||  ||| ||||||||| | |||||||| ||||||||||| |||||||||||    
T  14863815 ttattcaacaaagattcaatggaagagattatacctaatggagctttaaagaaggaaagagcatagacagg 14863745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 259 - 357
Target Start/End: Original strand, 17914471 - 17914569
Alignment:
Q  259 gaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagataga 357  Q
    ||||| |||||||  ||||||||||||||||||||   |||||| ||||| || | || ||||||||||||||||||||| || || || |||||||||    
T  17914471 gaaatgatacctgcgggagctttgaagaaggaaagaaaatagaccggaagagaggacaagacagacttaagaagaactaaacggccacccaaagataga 17914569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 21739847 - 21739777
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||| |||||||||||||||  ||| |||||| |||| |||||||| ||||||||||| |||||||||||    
T  21739847 ttattcaacaaagattcaatggaagagattataactgatggagctttaaagaaggaaagagcatagacagg 21739777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 308
Target Start/End: Original strand, 48930530 - 48930580
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaag 308  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  48930530 agaaattatacctgacggagccttgaagaaggtaagagcatagacaggaag 48930580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 52250700 - 52250615
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccattt 105  Q
    |||||||||  ||||||||||||||||||||| ||||||||||||||| || | ||| || || | |||||| ||||||||||||||    
T  52250700 caacctcccatcctcctcaccatatctcgccaccaacaccctataccataaactacc-ctctccaccaacaaacgccaacaccattt 52250615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 53941867 - 53941953
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccattt 105  Q
    ||||||||| |||||||||||||| | ||||| ||||||| ||||||| |||||  ||||||| | ||||| || ||||||||||||    
T  53941867 caacctcccagcctcctcaccataccgcgccaccaacaccttataccagaacccctctctatccaccaacatcctccaacaccattt 53941953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 48930290 - 48930379
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacc 108  Q
    |||||||||  ||||||||||||||||||||| ||| ||||||||||| || | |   || |||| ||||| ||||||||||||||||||    
T  48930290 caacctcccatcctcctcaccatatctcgccaccaaaaccctataccataaactattcctctctaccaacagccgccaacaccatttacc 48930379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 303
Target Start/End: Complemental strand, 15481117 - 15481049
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagaca 303  Q
    ||||| || ||||||||||||  ||| ||||||||||| |||||||||||||| ||||| |||||||||    
T  15481117 ttattcaataaagattcaatggaagagattatacctgatggagctttgaagaaagaaagagcatagaca 15481049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 258 - 305
Target Start/End: Original strand, 6825616 - 6825663
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||||||||| ||||||||| |||||||||||||| |||||||||||    
T  6825616 agaaattatacttgacggagccttgaagaaggaaagagcatagacagg 6825663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 20367359 - 20367429
Alignment:
Q  265 atacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    |||||||| |||||||||||||||||||   |||||| ||||||||| |||||||||  ||||||| ||||    
T  20367359 atacctgagggagctttgaagaaggaaatgacatagataggaagcgaggtcaggacaaccttaagatgaac 20367429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 42807259 - 42807345
Alignment:
Q  45 tcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattctt 131  Q
    |||||| |||||||||| |||| || | | | ||||||| ||||| ||||||||||||||| ||||  || ||||||||||||||||    
T  42807259 tcgccaccaacaccctaaaccataaactatccctatctaccaacatccgccaacaccatttccccaataacgctaaattaaattctt 42807345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 371
Target Start/End: Original strand, 8130793 - 8130890
Alignment:
Q  274 ggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgcca 371  Q
    ||||| |||||||||||||| |||||||| ||  |||  |||| ||||||||| |||||||  |||||||| || || || ||||| |||||||||||    
T  8130793 ggagccttgaagaaggaaagagcatagaccggttgcgcggtcaagacagactttagaagaatcaagcgacctccaaatgaaagaaatcgactttgcca 8130890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 262 - 335
Target Start/End: Original strand, 44888712 - 44888785
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    ||||||||||| || ||| ||||||||||||  |||||||||||||| || | || |||||||||||| |||||    
T  44888712 attatacctgatggtgctctgaagaaggaaaaagcatagacaggaagagaggacaagacagacttaaggagaac 44888785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 47538075 - 47538135
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacag 322  Q
    |||||| |||| |||| ||||||||||||||| ||||||||||| || || ||||||||||    
T  47538075 attatatctgatggagttttgaagaaggaaagcgcatagacaggtagagaggtcaggacag 47538135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 305
Target Start/End: Original strand, 18381840 - 18381899
Alignment:
Q  246 agattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||||||||  ||| ||||||||||| ||||||||||| |||||||  |||||||||||    
T  18381840 agattcaatggaagatattatacctgatggagctttgaaaaaggaaatagcatagacagg 18381899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 30166880 - 30166793
Alignment:
Q  59 ctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattcttgcaactacctcaccc 146  Q
    |||||||| || |||||||| || | ||||| |||||||||||||||||| | ||||||   ||||||||| | ||||| ||||||||    
T  30166880 ctataccacaaaccacctctgtcaaccaacatccgccaacaccatttacctaacaaagcactattaaattccttcaactgcctcaccc 30166793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 1709683 - 1709613
Alignment:
Q  265 atacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    |||||| | |||||||||||||||||||| |||||||||  ||| || |||| || ||||||||| |||||    
T  1709683 ataccttatggagctttgaagaaggaaagagcatagacaaaaagtgaggtcatgatagacttaaggagaac 1709613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 6176017 - 6175947
Alignment:
Q  56 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaa 126  Q
    ||||||||||| || |||||||| || | || || ||||||||||||||| || | |||||||||||||||    
T  6176017 accctataccacaaaccacctctgtccaccagcatccgccaacaccattttcctaacaaagctaaattaaa 6175947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 6825386 - 6825472
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccattt 105  Q
    |||||||||  ||||||||||||| | ||||| ||||||||||||||| || | ||  || || | |||||| ||||||||||||||    
T  6825386 caacctcccatcctcctcaccataccgcgccaccaacaccctataccataaactactcctctcaaccaacaaacgccaacaccattt 6825472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 23604148 - 23604202
Alignment:
Q  239 taaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaag 293  Q
    |||||||||| |||| || |||||| |||||||| |||||||||||||| |||||    
T  23604148 taaacaaagagtcaaggatagaaatgatacctgagggagctttgaagaaagaaag 23604202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 36709690 - 36709760
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||| || ||||||||||||  ||| ||||||||||  |||||||||||||| ||||| |||| ||||||    
T  36709690 ttattcaataaagattcaatggaagagattatacctgttggagctttgaagaaagaaagagcatcgacagg 36709760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 46190066 - 46190136
Alignment:
Q  29 gcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaaca 99  Q
    |||||||||||||| ||||||| ||| ||||| ||||| || || ||| |||| | |||||||||||||||    
T  46190066 gcctcctcaccatacctcgccaccaataccctgtaccacaaacctcctttatccaccaacaaccgccaaca 46190136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 305
Target Start/End: Complemental strand, 42674788 - 42674727
Alignment:
Q  244 aaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||||||||||  ||| |||| |||||  |||||||||||||| ||||| |||||||||||    
T  42674788 aaagattcaatggaagagattacacctgttggagctttgaagaaagaaagagcatagacagg 42674727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 48569598 - 48569529
Alignment:
Q  36 caccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccattt 105  Q
    ||||||| || |||| ||||||||||  ||| |||||| ||||||| |  ||||||||||||||||||||    
T  48569598 caccatacctagccaccaacaccctacgccacaacccatctctatcaactaacaaccgccaacaccattt 48569529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 305
Target Start/End: Original strand, 10868431 - 10868495
Alignment:
Q  241 aacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||| |||||||||  ||| |||||||||||  ||||||| ||||||||||| ||||| |||||    
T  10868431 aacaaggattcaatggaagagattatacctgatagagctttaaagaaggaaagagcatatacagg 10868495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 278; Significance: 1e-155; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 19 - 380
Target Start/End: Original strand, 19350508 - 19350870
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19350508 caacctccctgcctcctcaccatatctcgccaccaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 19350607  T
Q  119 aaattaaattcttgcaactacctcaccct-agacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
    ||||||||||| ||||||| ||||||||  ||||||  |||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  19350608 aaattaaattcctgcaactgcctcacccccagacctccaaactcctttttcaaacaaacagagctctaagcgatccaggaaattttcctattatcctcac 19350707  T
Q  218 tacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcag 317  Q
    |||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  19350708 tacctccccaaaaaaatttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtacatagacaggaagcgaactcag 19350807  T
Q  318 gacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaa 380  Q
     ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  19350808 tacagacttaagaagaaccaaacgacccccgaaagatagaaaacgactttgccaccccgacaa 19350870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 19 - 493
Target Start/End: Original strand, 32186247 - 32186722
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    ||||||||| ||| |||||| ||||||||||| |||||||||||||||||||||||||||||| | ||||||| |||||||||||||| ||| ||| |||    
T  32186247 caacctcccagccacctcactatatctcgccaccaacaccctataccaaaacccacctctatccaccaacaactgccaacaccatttatccaacaaggct 32186346  T
Q  119 aaattaaattcttgcaactacctcaccct-agacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
    |||||||| |||   |||| ||||||||  || |||| | |||||||   |||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  32186347 aaattaaactctctaaactgcctcacccccagcccttcatactccttacctaaacaaatagagctccaagcaatccaggaaattttcctgttatcctcac 32186446  T
Q  218 tacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcag 317  Q
    | ||||           || ||||| |||| |||||||  ||| |||||| ||| ||||||||||||||| ||||| |  |||||||||||||| |||||    
T  32186447 tccctctttaaaaaaaattcttaaataaagtttcaatggaagagattatatctgtcggagctttgaagaaagaaagagtgtagacaggaagcgaggtcag 32186546  T
Q  318 gacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaa 417  Q
    |||||||||||||||||  ||||| ||||| ||||||||||| ||||| ||||||   |||| ||||| ||||||||||| || || ||||||||||||     
T  32186547 gacagacttaagaagaatcaagcggcccccaaaagatagaaagcgactctgccactttgacagtctagatttaatagtagacatcataggttcccaaaag 32186646  T
Q  418 gctaattttctaggatcaccgccaatagagagaccaagatacaagaacggagttttgcccactttacaatttaaaa 493  Q
    |||||  ||| |||||||||  |||| ||||||||||||||||| || ||| | || ||||| |||||||||||||    
T  32186647 gctaaccttcgaggatcaccatcaattgagagaccaagatacaaaaatggaatattacccaccttacaatttaaaa 32186722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 29976584 - 29976377
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29976584 caacctccctgcctcctcaccatatctcgccaccaacaccctataccaaaacccacctctatctatcaacaaccgccaacgccatttacccatcaaagct 29976485  T
Q  119 aaattaaattcttgcaactacctca-ccctagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
    |||||||||||  |||||| ||||| ||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29976484 aaattaaattcccgcaactgcctcacccccagacctccaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 29976385  T
Q  218 tacctccc 225  Q
    ||||||||    
T  29976384 tacctccc 29976377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 19 - 521
Target Start/End: Original strand, 25350786 - 25351290
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    ||||||||| |||||||||||||| | ||||| ||||||||||||||| |||||| ||||||| | ||||| || |||| ||||||| || |  |||||     
T  25350786 caacctcccagcctcctcaccataccgcgccaccaacaccctataccagaacccatctctatccaccaacatcctccaaaaccattttcctaataaagca 25350885  T
Q  119 aaattaaattcttgcaactacctcac-cctagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
     |||||||||| |  || | |||||| || |  |||  ||||||||||  ||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  25350886 caattaaattcctttaatttcctcacacccaatcctccaaactcctttcgtaaacaaactgagctccaagcaatccaggaaattttcctgttatcctcac 25350985  T
Q  218 tacctccccnnnnnnnttt-attaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtca 316  Q
    | |||||||       ||| |||||| | ||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  25350986 tccctccccaaattttttttattaaaaatagattcaatgatagagattatacctgacggagctttgaagaaggaaagagcatagacaggaagcgaggtca 25351085  T
Q  317 ggacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaa 416  Q
     |||| |||| | ||| || || ||||| ||  | |||||||| ||||| ||||||||||||||||| |  ||||| ||| ||| |||||| ||||| ||    
T  25351086 agacaaactttaaaaggaccaaccgaccaccataggatagaaagcgactctgccaccccgacaatctggacttaattgtatgcaacacaggatcccagaa 25351185  T
Q  417 agctaattttctaggatcaccgccaatagagagaccaagatacaagaacggagttttgcccactttacaatttaaaactgatgcagcctctaacaaccac 516  Q
     |||||     | |||| ||| |||||||| ||||| |||||||  || ||| | |||||||||||||| ||||||| ||| || ||||| | ||||||     
T  25351186 tgctaaccgattcggattaccaccaatagaaagacccagatacagaaagggaatcttgcccactttacagtttaaaattgaggccgcctcaatcaaccaa 25351285  T
Q  517 gactc 521  Q
    |||||    
T  25351286 gactc 25351290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 19 - 493
Target Start/End: Complemental strand, 14843713 - 14843238
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    ||||||||||| |||||||||||||||||| | || ||||||||||||||| ||| ||||||||| |||||  ||||||||||||||||| | |||| |     
T  14843713 caacctccctgtctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctatctaccaacattcgccaacaccatttacctaacaaatca 14843614  T
Q  119 aaattaaattcttgcaactacctcac-cctagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
      |||||| ||   || ||  ||||| || |  |||  | ||||||||| ||||||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  14843613 ctattaaactccctcagctttctcactcccaaccctccatactccttttgtaaacaaacagagttccaagcgacccaggaaattttccttttatcctcac 14843514  T
Q  218 tacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcag 317  Q
    | |||||||       ||||||||| | ||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||| |  || ||||     
T  14843513 tccctccccaaaaaaatttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaa 14843414  T
Q  318 gacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaa 417  Q
    ||||| ||| |||||||  || |||||||| ||||| ||| | | ||||||||||||||| |||||||  || ||| |   || |||||||||||||||     
T  14843413 gacagtcttgagaagaatcaaccgacccccaaaagagagatagctactttgccaccccgataatctagactttatattcttcaacacaggttcccaaaag 14843314  T
Q  418 gctaattttctaggatcaccgccaatagagagaccaagatacaagaacggagttttgcccactttacaatttaaaa 493  Q
    |||||  |  | |||||||| |||||||| ||||| |||||||  |||| |  ||| || ||||| ||||||||||    
T  14843313 gctaacctcttcggatcaccaccaatagaaagacccagatacagaaacgtaactttaccaactttgcaatttaaaa 14843238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 56 - 421
Target Start/End: Complemental strand, 14686547 - 14686181
Alignment:
Q  56 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattcttgcaactacctcac-cctagacctt 154  Q
    |||||||||||||| || |||||||| | ||||| |||||||||||||||||| | ||||||   |||||||||  | |||  |||||| || | |||      
T  14686547 accctataccaaaatccgcctctatccaccaacatccgccaacaccatttacctaacaaagcgctattaaattcccgtaacctcctcactcccaaaccac 14686448  T
Q  155 taaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaat 254  Q
     | | |||||   |||||||| ||||  |||||| |||||||| |||||||||||||||||||| |||||||        |||||||||| |||||||||    
T  14686447 catattccttacgtaaacaaatagagtgccaagcaatccaggagattttcctgttatcctcactccctccccaaaaaaaattattaaacatagattcaat 14686348  T
Q  255 gagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagat 354  Q
    || ||| ||||||||||||||||| |||||||||||||| ||||||||||| |  |  | ||||||||| || ||||| || || ||||| ||  ||||     
T  14686347 gatagagattatacctgacggagccttgaagaaggaaagagcatagacaggtaatgcggacaggacagaattcagaaggaccaaccgacctccataagaa 14686248  T
Q  355 agaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaagcta 421  Q
    || |||||||||||||||||| ||| ||||| |||||| ||   || |||||| |||||||||||||    
T  14686247 aggaaacgactttgccaccccaacagtctagatttaattgttttcaacacagggtcccaaaaagcta 14686181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 158 - 422
Target Start/End: Original strand, 26514428 - 26514693
Alignment:
Q  158 actccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnnttta-ttaaacaaagattcaatga 256  Q
    ||||||||  |||||| || ||||||||||| ||||||||||||||||| ||||||||||| |||||||       |||  ||||| | |||||||||||    
T  26514428 actcctttcgtaaacatactgagctccaagcaatccaggaaattttcctattatcctcactccctccccaaaaaaattttgttaaaaatagattcaatga 26514527  T
Q  257 gagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatag 356  Q
     ||| | |||||||||| ||||||||||||| ||||| ||||||||||||||||| |||| ||| ||||| | ||| || || ||||| || ||||||||    
T  26514528 tagagagtatacctgacagagctttgaagaaagaaagagcatagacaggaagcgaggtcaagaccgacttcaaaaggaccaaacgaccaccaaaagatag 26514627  T
Q  357 aaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaagctaa 422  Q
    ||| ||||| |||||||||||||||| ||  || ||| || ||| ||| || ||||||||||||||    
T  26514628 aaagcgactatgccaccccgacaatcgagactttataatatgcaacactgggtcccaaaaagctaa 26514693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 234 - 506
Target Start/End: Original strand, 26206113 - 26206385
Alignment:
Q  234 tttattaaacaaagattcaatgagagaa-attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaag 332  Q
    |||| |||||||||||||||| |||| | ||||||||||| |||||||||||||||||||||||||||||||| |  || ||||||||||| || |||||    
T  26206113 tttaataaacaaagattcaat-agaggagattatacctgatggagctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaag 26206211  T
Q  333 aactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaagctaattttctagga 432  Q
    ||| |||||||| || ||||||||||| ||||| | ||| ||||||| ||||| |||||||  |  ||| | ||||||||| |||   ||| ||| ||||    
T  26206212 aaccaagcgaccaccaaaagatagaaaccgactattccaacccgacagtctagatttaatacgattcacaataggttcccagaaacacaatcttcgagga 26206311  T
Q  433 tcaccgccaatagagagaccaagatacaagaacggagttttgcccactttacaatttaaaactgatgcagcctc 506  Q
    | ||| |||||||  | ||| ||||||||||| |||   || || ||||||||| |||| || || ||||||||    
T  26206312 ttaccaccaataggcatacccagatacaagaaaggaacgttacctactttacaacttaacacggaagcagcctc 26206385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 234 - 416
Target Start/End: Original strand, 2554385 - 2554567
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| |||||||| |||||||||||||| |||||||||||||||||||| || | |||||||||  |||| || |||    
T  2554385 tttattaaacaaagattcaatggaagagattatacccgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacgaactttagtaga 2554484  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaa 416  Q
    |  || ||||| |||||||| || || |||||||| || || |||||||||| |||||||  |  ||| ||||||||||||||    
T  2554485 atcaaacgaccaccgaaagaaaggaaccgactttgtcaaccagacaatctagatttaatacgattcacaacaggttcccaaaa 2554567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 234 - 323
Target Start/End: Complemental strand, 17577077 - 17576988
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacaga 323  Q
    |||||||||||||||||||||   ||| ||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| ||||||    
T  17577077 tttattaaacaaagattcaatagaagagattatacctgacggagctttgaaaaaggaaagtgaatagacaggaagcgcagtcaagacaga 17576988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 156 - 305
Target Start/End: Complemental strand, 502970 - 502821
Alignment:
Q  156 aaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaatg 255  Q
    ||||||||||| || |||||||||||||||| | ||||| || |||||||| | ||||||||| || ||||        |||||||| |||||||||| |    
T  502970 aaactccttttgtagacaaacagagctccaacctatccaagacattttcctatgatcctcactcccaccccaaaaaaaattattaaataaagattcaagg 502871  T
Q  256 agagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
      ||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  502870 gtagagattatacctgacggagctttgaagaaagaaagagcatagacagg 502821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 334
Target Start/End: Complemental strand, 24766774 - 24766674
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    |||||| |||||||||| ||||  ||| ||||||||||||||||||||||| |||||||||||||||||||| || | ||||||||| ||||| ||||||    
T  24766774 tttatttaacaaagatttaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaaga 24766675  T
Q  334 a 334  Q
    |    
T  24766674 a 24766674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 332
Target Start/End: Original strand, 13938498 - 13938596
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaag 332  Q
    |||||| |||||||||||||||  ||| ||||||||||||||||||||||| |||||||| ||||||| |||||| | |||||||||||| || |||||    
T  13938498 tttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagataggaagtgcagtcaggacagatttgagaag 13938596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 21629481 - 21629384
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaag 332  Q
    ||||| ||||| ||||||||   ||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||| || |||||    
T  21629481 ttatttaacaaggattcaatagaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacagatttgagaag 21629384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 392
Target Start/End: Complemental strand, 15956334 - 15956178
Alignment:
Q  236 tattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    |||| |||||||||||||||  ||| ||||||||| || |||||||||| ||||||||| |||| |||||||||| ||| |||||  |||  ||||| |     
T  15956334 tatttaacaaagattcaatggaagagattatacctaactgagctttgaaaaaggaaagtacataaacaggaagcgcagttaggacgaactatagaaggat 15956235  T
Q  336 taagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaat 392  Q
    ||||||||| || ||||| || || ||||| ||||| || |||||| ||||||||||    
T  15956234 taagcgaccaccaaaagaaaggaaccgactatgccaaccagacaatatagttttaat 15956178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 191 - 323
Target Start/End: Complemental strand, 18681977 - 18681845
Alignment:
Q  191 tccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaagga 290  Q
    |||| |||||||| || ||||||||||| |||||||       |||||| ||||||||||||||| |||| |||||||| || ||||||||||| |||||    
T  18681977 tccaagaaatttttcttttatcctcactccctccccaaaaaaatttatttaacaaagattcaatgggagagattatacccgatggagctttgaaaaagga 18681878  T
Q  291 aagtgcatagacaggaagcgaagtcaggacaga 323  Q
    ||| || |||||||||||   ||||||||||||    
T  18681877 aagagcgtagacaggaagtctagtcaggacaga 18681845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 17605693 - 17605596
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaag 332  Q
    ||||| ||||||||||||||   ||| ||||||||||| ||||||||||| |||||||| |||||||||||||||| ||||| |||||| || |||||    
T  17605693 ttatttaacaaagattcaatagaagagattatacctgatggagctttgaaaaaggaaagcgcatagacaggaagcgcagtcaagacagatttgagaag 17605596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 262 - 393
Target Start/End: Original strand, 15674640 - 15674771
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaac 361  Q
    ||||||||||  |||||||||||||||||||||||||||||||| || || |||| |||||| || || |||||  ||||||| || ||||| ||||| |    
T  15674640 attatacctgctggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaacccagcgaccaccaaaagagagaaacc 15674739  T
Q  362 gactttgccaccccgacaatctagttttaata 393  Q
    | || | ||| ||||||| ||||| |||||||    
T  15674740 gtctattccaacccgacagtctagatttaata 15674771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 234 - 367
Target Start/End: Original strand, 10362927 - 10363059
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||| | ||| ||||||  ||||||||||  ||||||| | |||||||||||||| ||||||||||| || || |||| ||||||||| ||||||    
T  10362927 tttattaaaaatagaatcaatggaagaaattatat-tgacggaaccttgaagaaggaaagagcatagacaggtagagaggtcaagacagacttgagaaga 10363025  T
Q  334 actaagcgacccccgaaagatagaaaacgacttt 367  Q
    ||||| ||||| || || || ||||| |||||||    
T  10363026 actaaacgaccaccaaacgacagaaaccgacttt 10363059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 171 - 365
Target Start/End: Original strand, 33640634 - 33640828
Alignment:
Q  171 acaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacct 270  Q
    |||||||||| ||||| | ||||| || |||||||| | ||||||||| || ||||        |||||||| |||||||||| |  ||||||||||||     
T  33640634 acaaacagagttccaacctatccaagacattttcctatgatcctcactcccaccccaaaaaaaattattaaataaagattcaagggtagaaattataccc 33640733  T
Q  271 gacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacgact 365  Q
    ||| ||||||||||||| ||||| ||||||||||| || || ||||  ||||| || |||||||| || || || || ||||| || ||||||||    
T  33640734 gacagagctttgaagaaagaaagagcatagacaggcagagaggtcaacacagatttgagaagaaccaaacggccaccaaaagagaggaaacgact 33640828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 239 - 326
Target Start/End: Complemental strand, 649428 - 649341
Alignment:
Q  239 taaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagactt 326  Q
    |||| ||||| ||||||  ||| ||||||||||| |||||||||||||||||||| ||||||||||| || || ||||| ||||||||    
T  649428 taaataaagaatcaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcagaacagactt 649341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 10920040 - 10919957
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacacca 102  Q
    ||||||||| |||||||||||||| || || | ||||||||||||||||||||| |||||||| | ||||| || |||||||||    
T  10920040 caacctccccgcctcctcaccatacctagcaaccaacaccctataccaaaacccccctctatcaaccaacatcctccaacacca 10919957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 13086324 - 13086394
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||| |||||||||||||||| ||| ||||||||||| |||||||| ||||||||||| ||||| |||||    
T  13086324 ttatttaacaaagattcaatgaaagagattatacctgatggagctttaaagaaggaaagagcataaacagg 13086394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 267 - 385
Target Start/End: Original strand, 29824777 - 29824895
Alignment:
Q  267 acctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacgactt 366  Q
    |||||||||||||||||| |||||||| ||  ||||| | || ||| |||  ||| |||| ||||||||||| ||||| |||||||| || |||| ||||    
T  29824777 acctgacggagctttgaaaaaggaaagagcgaagacatgcagagaaatcataacaaacttgagaagaactaaacgacctccgaaagagaggaaacaactt 29824876  T
Q  367 tgccaccccgacaatctag 385  Q
    | ||  |||||||||||||    
T  29824877 ttccgacccgacaatctag 29824895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 13563350 - 13563305
Alignment:
Q  180 gctccaagcgatccaggaaattttcctgttatcctcactacctccc 225  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||    
T  13563350 gctccaagcgatccaggaaattttcctgttattctcacttcctccc 13563305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 34434824 - 34434913
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacc 108  Q
    |||||||||  ||||||||||||||||||||| ||| ||||||||||| |  | ||  || |||| ||||| ||||||||||||||||||    
T  34434824 caacctcccatcctcctcaccatatctcgccaccaaaaccctataccatatactactcctctctaccaacatccgccaacaccatttacc 34434913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 11060222 - 11060130
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagactt 326  Q
    |||| |||| ||||| ||||||  ||| ||||||||||| ||| |||||||||||||||| ||||||||||| |   | ||||||||||||||    
T  11060222 tttaataaataaagaatcaatggaagagattatacctgatggaactttgaagaaggaaagcgcatagacaggcaaaaaggtcaggacagactt 11060130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 13563262 - 13563219
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  13563262 attatacctgacggagctttgaaaaaggaaagagcatagacagg 13563219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 18588913 - 18589004
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttaccca 110  Q
    |||||||||  |||||||||||||||| |||| |||||| | |||||| |||||  ||||||| |  ||||| ||||||||||| |||||||    
T  18588913 caacctcccgtcctcctcaccatatctagccaccaacactcgataccataacccgtctctatcaactaacaaacgccaacaccacttaccca 18589004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 23347006 - 23346936
Alignment:
Q  56 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaa 126  Q
    ||||||||||| || ||||||||||| | || || ||||||||||||||| || | |||||||||||||||    
T  23347006 accctataccacaaaccacctctatccaccagcatccgccaacaccattttcctaacaaagctaaattaaa 23346936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 239 - 304
Target Start/End: Complemental strand, 17078422 - 17078357
Alignment:
Q  239 taaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacag 304  Q
    |||| ||||| ||||||  ||| ||||||||||| |||||||||||||||||||| ||||| ||||    
T  17078422 taaataaagaatcaatggaagagattatacctgatggagctttgaagaaggaaagcgcataaacag 17078357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 1104306 - 1104214
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagactta 327  Q
    ||||| || |||||||||||   ||| ||| ||||| | |||||||||||||||||||| ||||||||||  || |||||||| ||| |||||    
T  1104306 ttattcaataaagattcaatataagagattgtacctaatggagctttgaagaaggaaagagcatagacagacagagaagtcagtacaaactta 1104214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 241 - 293
Target Start/End: Original strand, 11469360 - 11469412
Alignment:
Q  241 aacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaag 293  Q
    |||||||||||||||  ||| |||| |||||| ||||||||||||||||||||    
T  11469360 aacaaagattcaatggaagagattaaacctgatggagctttgaagaaggaaag 11469412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 303
Target Start/End: Original strand, 21549628 - 21549696
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagaca 303  Q
    ||||| || ||||||||||||  ||| ||||||||||  |||||||||||||| ||||| |||||||||    
T  21549628 ttattcaataaagattcaatggaagagattatacctgttggagctttgaagaaagaaagagcatagaca 21549696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 10362697 - 10362744
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctatacca 66  Q
    |||||||||  ||||||||||||||||||||| ||| |||||||||||    
T  10362697 caacctcccatcctcctcaccatatctcgccaccaaaaccctatacca 10362744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 1104523 - 1104425
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagc 117  Q
    ||||||| |||||||||||||||| |  || | || |||||||||||| || |||| ||||| ||  ||||| | ||||||||||||||| | ||||||    
T  1104523 caacctcactgcctcctcaccataacgagcaaccatcaccctataccacaaaccacatctatttactaacaaactccaacaccatttacctaacaaagc 1104425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 24573864 - 24573934
Alignment:
Q  265 atacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    |||||| | |||||||||||||||||||| || |||| ||| || || |||| |||| |||||||||||||    
T  24573864 atacctaagggagctttgaagaaggaaagagcctagatagggagagaggtcaagacatacttaagaagaac 24573934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 334
Target Start/End: Complemental strand, 17110464 - 17110395
Alignment:
Q  265 atacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    |||| ||| |||||||||||||||||||   |||||||||| ||  ||||||||| ||||||||| ||||    
T  17110464 atacttgagggagctttgaagaaggaaatatcatagacagggagaaaagtcaggatagacttaaggagaa 17110395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 124
Target Start/End: Original strand, 23664031 - 23664064
Alignment:
Q  91 ccgccaacaccatttacccatcaaagctaaatta 124  Q
    |||||||||||||||||| |||||||||||||||    
T  23664031 ccgccaacaccatttaccaatcaaagctaaatta 23664064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 290
Target Start/End: Complemental strand, 34372293 - 34372240
Alignment:
Q  237 attaaacaaagattcaatgagagaaattatacctgacggagctttgaagaagga 290  Q
    |||||| |||||||||| |  ||||||||||||||| || ||||||||||||||    
T  34372293 attaaataaagattcaagggtagaaattatacctgagggggctttgaagaagga 34372240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 2923632 - 2923668
Alignment:
Q  256 agagaaattatacctgacggagctttgaagaaggaaa 292  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  2923632 agagagattatacctgacggaactttgaagaaggaaa 2923668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 338
Target Start/End: Original strand, 12913599 - 12913699
Alignment:
Q  238 ttaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaacta 337  Q
    ||||| |||||||||||   |||||| |||||||  ||||||||||||||||||||    ||||| ||||| || | || ||||||||| || |||||||    
T  12913599 ttaaataaagattcaatagaagaaatgatacctgcgggagctttgaagaaggaaagaaagtagaccggaagagaggacaagacagactttaggagaacta 12913698  T
Q  338 a 338  Q
    |    
T  12913699 a 12913699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 13214901 - 13214853
Alignment:
Q  78 tatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaa 126  Q
    |||| ||||||| || ||||||||||||||||| ||||| |||||||||    
T  13214901 tatcaatcaacatcctccaacaccatttacccaacaaagataaattaaa 13214853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 265; Significance: 1e-147; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 19 - 379
Target Start/End: Complemental strand, 27218698 - 27218337
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||    
T  27218698 caacctccctgcctcctcaccatatctcgccaccaacaccctataccaaaatccacctctatctatcaacaaccgccaacaccatttacctaacaaagct 27218599  T
Q  119 aaattaaattcttgcaactacctcaccct-agacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
    ||||||||||   |||||| ||||||||  || |||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27218598 aaattaaatttccgcaactgcctcacccccagccctccaaactccttttttaaacaaacagagctctaagcgatccaggaaattttcctgttatcctcac 27218499  T
Q  218 tacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcag 317  Q
    |||||||||       ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||     
T  27218498 tacctccccaaaaaaatttattaaacaaagattcaatgagagaaattatacctgacggagccttgaagaaggaaagtgcatagacatgaagcgaagtcaa 27218399  T
Q  318 gacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgaca 379  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27218398 gacagacttaagaagaaccaagcgacccccgaaagatagaaaacgactttgccaccccgaca 27218337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 234 - 416
Target Start/End: Complemental strand, 4937488 - 4937306
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||||||| ||||||    
T  4937488 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 4937389  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaa 416  Q
    |  || ||||| ||||||||||| || ||||||||||| || |||||||||| |||||||  |  ||||||||||||||||||    
T  4937388 atcaaacgaccaccgaaagataggaaccgactttgccaaccagacaatctagatttaatacgatccaccacaggttcccaaaa 4937306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 190 - 392
Target Start/End: Original strand, 17721371 - 17721573
Alignment:
Q  190 atccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaagg 289  Q
    ||||| |||||||| || ||||||||||  |||||||       ||||||||||||||||||||||  ||| ||||||||||||||||||||||| ||||    
T  17721371 atccatgaaatttttcttttatcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaagg 17721470  T
Q  290 aaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagtttt 389  Q
    |||||||||||||||| || | |||||||||  ||||||||||||| || ||||| || ||||| || || ||||||||||| || ||||||||| ||||    
T  17721471 aaagtgcatagacaggtagagcagtcaggacgaacttaagaagaaccaaacgaccaccaaaagaaaggaaccgactttgccaaccagacaatctattttt 17721570  T
Q  390 aat 392  Q
    |||    
T  17721571 aat 17721573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 170 - 396
Target Start/End: Complemental strand, 33820983 - 33820757
Alignment:
Q  170 aacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacc 269  Q
    ||||||||| ||||||||||| ||| |||||||||||||||| |||||| |||||||       ||| ||||| | | ||||||||  ||| || |||||    
T  33820983 aacaaacagtgctccaagcgagccaagaaattttcctgttattctcactccctccccaaaaatttttgttaaaaataaattcaatggaagagataatacc 33820884  T
Q  270 tgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgc 369  Q
    ||| ||||||||||||||||||||  |||||| ||| || || ||||||||||| || |||||||  || |||||| | ||||||||||||||  |||||    
T  33820883 tgatggagctttgaagaaggaaagaacatagataggcagagaggtcaggacagaattgagaagaatcaaccgacccgcaaaagatagaaaacggttttgc 33820784  T
Q  370 caccccgacaatctagttttaatagta 396  Q
    || | |||||||||||  |||||||||    
T  33820783 catctcgacaatctagacttaatagta 33820757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 234 - 393
Target Start/End: Original strand, 29968754 - 29968913
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||| ||||||||||| || | ||||||||| ||||| ||||||    
T  29968754 tttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacaggtagagcagtcaggacggactttagaaga 29968853  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaata 393  Q
    |  || || || ||||| || || || ||||||||||| || | |||||||| |||||||    
T  29968854 atcaaacggccaccgaaggaaaggaaccgactttgccaaccagccaatctagatttaata 29968913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 234 - 371
Target Start/End: Complemental strand, 11276608 - 11276471
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||||||||||||| || | ||||||||| ||||| || |||    
T  11276608 tttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttaggaga 11276509  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgcca 371  Q
    |  || ||||| |||||||| || || | |||||||||    
T  11276508 atcaaacgaccaccgaaagaaaggaaccaactttgcca 11276471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 239 - 356
Target Start/End: Complemental strand, 22819072 - 22818955
Alignment:
Q  239 taaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaa 338  Q
    ||||||||||||||| |  ||||| ||||||||| |||||| |||||||||||||||||||||||||||| || | |||||||| ||||||||||||||     
T  22819072 taaacaaagattcaagggtagaaagtatacctgatggagctctgaagaaggaaagtgcatagacaggaagagaggacaggacagccttaagaagaactag 22818973  T
Q  339 gcgacccccgaaagatag 356  Q
     ||||| || ||||||||    
T  22818972 acgaccaccaaaagatag 22818955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 19 - 226
Target Start/End: Complemental strand, 39658964 - 39658755
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacc-tctatctatcaacaaccgccaacaccatttacccatcaaagc 117  Q
    ||||||||| |||||||||||||| | ||||| ||||||||||||| | ||||| || |||||| | ||||| || |||||||||||| || |  |||||    
T  39658964 caacctcccagcctcctcaccataccgcgccaccaacaccctatactagaaccccccctctatccaccaacatcctccaacaccatttccctaataaagc 39658865  T
Q  118 taaattaaattcttgcaactacctcaccctaga-cctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctca 216  Q
      ||||||||||    |||| ||||||||   | |||  ||||||||||  ||||||||| ||||||||||| |||||| ||||||| ||||||||||||    
T  39658864 acaattaaattcccttaactgcctcacccccaatcctccaaactcctttcgtaaacaaactgagctccaagcaatccagaaaatttttctgttatcctca 39658765  T
Q  217 ctacctcccc 226  Q
    || |||||||    
T  39658764 ctccctcccc 39658755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 235 - 365
Target Start/End: Original strand, 45993357 - 45993487
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    |||||||| |||||||||| |  ||| |||||||||||||||||||||||||| ||||| ||||||||||| || || ||||  ||||| || |||||||    
T  45993357 ttattaaataaagattcaagggtagagattatacctgacggagctttgaagaaagaaagagcatagacaggcagagaggtcaacacagatttgagaagaa 45993456  T
Q  335 ctaagcgacccccgaaagatagaaaacgact 365  Q
    | || ||||| || ||||| || ||||||||    
T  45993457 ccaaacgaccaccaaaagagaggaaacgact 45993487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 304
Target Start/End: Complemental strand, 19544978 - 19544694
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    ||||||| ||||||||||||||||||  | |  |||||||||||||||||||||| ||||||| | ||||| ||||||||||||||| || |  || ||     
T  19544978 caacctctctgcctcctcaccatatcgtgtcgccaacaccctataccaaaacccatctctatccaccaacatccgccaacaccatttgcctaataaggca 19544879  T
Q  119 aaattaaattcttgcaactacctca-ccctagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
      |||||| ||   ||||| ||| | |||||  |||  | |||||||   |||||||| |||||||||||  | ||||||| |||||||||| ||||||     
T  19544878 ctattaaactccctcaactgcctgacccctaaccctccatactccttacgtaaacaaatagagctccaagaaacccaggaagttttcctgttctcctcat 19544779  T
Q  218 tacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacag 304  Q
    | ||||||        | ||||||| | ||||| ||||| |||||| ||||  | ||||||||||||||||||||| ||||||||||    
T  19544778 tccctccc--aatttttgtattaaaaatagatttaatgatagaaatgatactcggcggagctttgaagaaggaaagagcatagacag 19544694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 291
Target Start/End: Original strand, 34104041 - 34104314
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    |||||||| |||||||||||| || | ||||| |||||||||||||||||||||  || |||| ||||||| || ||| ||||||||  | |  ||  |     
T  34104041 caacctccttgcctcctcaccgtaacgcgccaccaacaccctataccaaaacccctctttatccatcaacatcctccagcaccatttgtctagtaagaca 34104140  T
Q  119 aaattaaattcttgcaactacctca-ccctagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
      |||||| ||   ||| | ||| | |||||  |||  | |||||||   |||||| | |||||||||||| | |||||||||||||||||| |||||||    
T  34104141 ctattaaactccctcaaatgcctgacccctaaccctccatactccttacgtaaacatatagagctccaagcaacccaggaaattttcctgttctcctcac 34104240  T
Q  218 tacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaa 291  Q
      |||||||       | ||||||| | ||||||||||| |||||| |||| ||||||||||||||||||||||    
T  34104241 gccctccccaaaattttgtattaaaaatagattcaatgatagaaatgatacttgacggagctttgaagaaggaa 34104314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 316
Target Start/End: Complemental strand, 36227501 - 36227429
Alignment:
Q  244 aaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtca 316  Q
    ||||||||||||  ||||||||||||||| |||||||||||||| ||||| ||||||||||| || |||||||    
T  36227501 aaagattcaatggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 36227429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 41805095 - 41805015
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaa 338  Q
    ||||||||||||||||| ||| ||||||||||| || ||||||||||| || || |||| ||||||||| |||||||||||    
T  41805095 agaaattatacctgacgaagccttgaagaaggagagagcatagacaggtagagaggtcaagacagactttagaagaactaa 41805015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 262 - 393
Target Start/End: Original strand, 13440866 - 13440997
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaac 361  Q
    ||||||||||  |||||||||||||||||||| ||||||||||| || || |||| |||| | || || ||||| |||||||| ||  |||| ||||| |    
T  13440866 attatacctgctggagctttgaagaaggaaagcgcatagacaggcagagaggtcaagacatatttgagtagaaccaagcgaccaccacaagagagaaacc 13440965  T
Q  362 gactttgccaccccgacaatctagttttaata 393  Q
    |||| | ||| ||||||| ||||| |||||||    
T  13440966 gactattccaacccgacagtctagatttaata 13440997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 19735299 - 19735369
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||| |||||||||||||||  ||| ||||||||||| |||||||| ||||||||||| |||||||||||    
T  19735299 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacagg 19735369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 23054547 - 23054485
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatc 81  Q
    ||||||||||||||||||||||| ||| |||  ||||||||||||||||||||| ||||||||    
T  23054547 caacctccctgcctcctcaccatgtctagccgccaacaccctataccaaaaccctcctctatc 23054485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 328
Target Start/End: Original strand, 45871543 - 45871637
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaa 328  Q
    ||||||||| | |||||||||   |||||| |||||||| |||||||||||||||||||| ||||| ||||| || |||| ||||||| ||||||    
T  45871543 tttattaaatatagattcaatagaagaaataatacctgaaggagctttgaagaaggaaagagcataaacaggtagagaagacaggacaaacttaa 45871637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 355
Target Start/End: Original strand, 4164831 - 4164940
Alignment:
Q  246 agattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgaccc 345  Q
    ||||||||||  ||| ||||||||||  |||||| |||| || ||||| || |||||||| ||||||| ||||||||||||||| ||||  ||||||||     
T  4164831 agattcaatggaagagattatacctgcgggagctctgaaaaaagaaagggcgtagacaggcagcgaagacaggacagacttaaggagaatcaagcgacca 4164930  T
Q  346 ccgaaagata 355  Q
    ||| ||||||    
T  4164931 ccgtaagata 4164940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 305
Target Start/End: Complemental strand, 23054320 - 23054259
Alignment:
Q  244 aaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||||||||||  ||| |||||||||||| ||||||| |||||||||||||||||||||||    
T  23054320 aaagattcaatggaagagattatacctgacagagctttaaagaaggaaagtgcatagacagg 23054259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 355
Target Start/End: Original strand, 34207122 - 34207231
Alignment:
Q  246 agattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgaccc 345  Q
    ||||||||||  ||| ||||||||||  |||||| |||| || ||||| || |||||||| ||||||| ||||||||||||||| ||||  ||||||||     
T  34207122 agattcaatggaagagattatacctgcgggagctctgaaaaaagaaagggcgtagacaggcagcgaagacaggacagacttaaggagaatcaagcgacca 34207221  T
Q  346 ccgaaagata 355  Q
    ||| ||||||    
T  34207222 ccgtaagata 34207231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 392
Target Start/End: Original strand, 41340330 - 41340487
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    |||||||| ||||||||||||  ||| ||||||||| ||| |||||||||||||||||| |||||||||   || |||||||| || || ||||| || |    
T  41340330 ttattaaataaagattcaatggaagagattataccttacgaagctttgaagaaggaaagggcatagacatacagagaagtcagaaccgatttaaggagga 41340429  T
Q  335 ctaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaat 392  Q
      |||||||| || || || ||||| || || |  || ||||||||||||| ||||||    
T  41340430 tcaagcgaccaccaaaggagagaaatcggctatttcaacccgacaatctagatttaat 41340487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 8752972 - 8752884
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttac 107  Q
    ||||||||| |||||||||||||||||||||| || |||||||||||| | ||| |||||||| | ||||| || ||| ||| ||||||    
T  8752972 caacctcccagcctcctcaccatatctcgccaccagcaccctataccacatccctcctctatccaccaacatcctccagcactatttac 8752884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 34232481 - 34232573
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagactt 326  Q
    |||| |||| ||||| ||||||  ||| ||||||||||| |||||||||||||||||||| ||||||||| | || || ||||| ||||||||    
T  34232481 tttaataaataaagaatcaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacaagcagagaggtcagaacagactt 34232573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 235 - 323
Target Start/End: Original strand, 46626603 - 46626691
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacaga 323  Q
    |||||||| |||||||||| |  ||| |||||| |||| |||||||||||||| ||||| ||||||||||| || ||||||| ||||||    
T  46626603 ttattaaataaagattcaagggaagagattatatctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 46626691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 31423375 - 31423434
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagt 294  Q
    ||||| |||||||||||||||  ||| ||||||||||||||||||||||| |||||||||    
T  31423375 ttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagt 31423434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 45164867 - 45164770
Alignment:
Q  274 ggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgcca 371  Q
    ||||| |||||||||||||| ||||||||||| ||||  |||| ||||||||| | |||||  |||||||| || || || ||||| |||||||||||    
T  45164867 ggagccttgaagaaggaaagagcatagacaggtagcgcggtcaagacagactttaaaagaatcaagcgacctccaaaggaaagaaaccgactttgcca 45164770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 17721266 - 17721306
Alignment:
Q  86 aacaaccgccaacaccatttacccatcaaagctaaattaaa 126  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  17721266 aacaaccgccaacaccatttacccaacaaagctaaattaaa 17721306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 25018638 - 25018558
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaa 338  Q
    ||||||||||||||||| ||| ||||||||||||||  |||||| ||| |  || |||| ||||||||| |||||||||||    
T  25018638 agaaattatacctgacgaagccttgaagaaggaaagaacatagataggtaaagaggtcaagacagactttagaagaactaa 25018558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 25018894 - 25018847
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctatacca 66  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||||||    
T  25018894 caacctcccagcctcctcaccatatcttgccaccaacaccctatacca 25018847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 303
Target Start/End: Original strand, 29917010 - 29917069
Alignment:
Q  244 aaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagaca 303  Q
    |||||||||||   ||| ||| ||||||| ||||||||||||||||||||||||||||||    
T  29917010 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 29917069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 34792004 - 34791936
Alignment:
Q  265 atacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    |||||||| |||||||||||||||||||| |||||||||||  |||| ||||| || |||||||| |||||    
T  34792004 atacctgagggagctttgaagaaggaaagggcatagacagg--gcgatgtcagaaccgacttaaggagaac 34791936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 41805323 - 41805284
Alignment:
Q  30 cctcctcaccatatctcgccatcaacaccctataccaaaa 69  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  41805323 cctcctcaccatatctcgccaccaacaccctataccaaaa 41805284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 4078058 - 4078128
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    |||||||| ||||||||||    ||| ||||||||||| |||||| ||||||||||||| |||||||||||    
T  4078058 ttattaaataaagattcaaaagaagagattatacctgatggagctctgaagaaggaaagcgcatagacagg 4078128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 13440654 - 13440724
Alignment:
Q  56 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaa 126  Q
    |||| |||||| || ||||||||||| | ||||| ||||||||||||||| || | |||||||||||||||    
T  13440654 acccgataccacaaaccacctctatccaccaacatccgccaacaccattttcctaacaaagctaaattaaa 13440724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 20349527 - 20349597
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaaca 89  Q
    |||||||||||||||||||||||| |  |||| ||||||||||||||| ||||   ||||||||| |||||    
T  20349527 caacctccctgcctcctcaccataccgagccaccaacaccctataccataacctttctctatctaccaaca 20349597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 344
Target Start/End: Complemental strand, 28740267 - 28740185
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacc 344  Q
    ||||||||| | |||||||||||||||||||| ||||| ||||| || |||| || |||||| ||||| |||  |||||||||    
T  28740267 attatacctaagggagctttgaagaaggaaagagcataaacaggcagagaagacatgacagatttaaggagagttaagcgacc 28740185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 262 - 335
Target Start/End: Original strand, 17056337 - 17056410
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    ||||||||||| || ||| ||||||||||||  |||||||||||||| || | || |||||||||||| |||||    
T  17056337 attatacctgatggtgctctgaagaaggaaaaagcatagacaggaagagaggacaagacagacttaaggagaac 17056410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 18671952 - 18672021
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacag 304  Q
    |||||||| ||||||||||||  ||| |||||||||||   ||||||||||||||||||  |||||||||    
T  18671952 ttattaaataaagattcaatggaagagattatacctgatatagctttgaagaaggaaagatcatagacag 18672021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 6335712 - 6335652
Alignment:
Q  274 ggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    ||||| |||||||||||||| ||||||||||| | || ||||| ||||||||| |||||||    
T  6335712 ggagccttgaagaaggaaagagcatagacaggtaacgcagtcaagacagactttagaagaa 6335652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 23887654 - 23887754
Alignment:
Q  26 cctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaa 125  Q
    |||||||||||||| || ||| ||  ||| ||||||||||| ||| ||||||| |||| || || || |||||||||||| || | |||||||| |||||    
T  23887654 cctgcctcctcaccgtacctcaccgccaaaaccctataccagaactcacctctgtctaccagcatcctccaacaccattttcctaacaaagctatattaa 23887753  T
Q  126 a 126  Q
    |    
T  23887754 a 23887754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 23898830 - 23898930
Alignment:
Q  26 cctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaa 125  Q
    |||||||||||||| || ||| ||  ||| ||||||||||| ||| ||||||| |||| || || || |||||||||||| || | |||||||| |||||    
T  23898830 cctgcctcctcaccgtacctcaccgccaaaaccctataccagaactcacctctgtctaccagcatcctccaacaccattttcctaacaaagctatattaa 23898929  T
Q  126 a 126  Q
    |    
T  23898930 a 23898930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 11341360 - 11341410
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaa 69  Q
    |||||||||||||||||||||||| || ||   ||||||||||||||||||    
T  11341360 caacctccctgcctcctcaccatacctagcagccaacaccctataccaaaa 11341410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 18768189 - 18768259
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||| || ||||||||||||  ||| ||||||| ||  |||||||||||||| ||||| |||||||||||    
T  18768189 ttattcaataaagattcaatggaagagattatacttgttggagctttgaagaaagaaagagcatagacagg 18768259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 88 - 130
Target Start/End: Original strand, 28507007 - 28507049
Alignment:
Q  88 caaccgccaacaccatttacccatcaaagctaaattaaattct 130  Q
    |||||||||||||||||| || || ||||||||||||||||||    
T  28507007 caaccgccaacaccatttgccaattaaagctaaattaaattct 28507049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 2820053 - 2820012
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagaca 303  Q
    |||||||||||||| |||||||||||||||||  ||||||||    
T  2820053 attatacctgacggggctttgaagaaggaaagaacatagaca 2820012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 17195272 - 17195373
Alignment:
Q  237 attaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaact 336  Q
    |||||| |||||||||||   |||||| |||||||  ||||||||||||||||||||    ||||| ||||| || | || ||||||||| || ||||||    
T  17195272 attaaataaagattcaatagaagaaatgatacctgcaggagctttgaagaaggaaagaaagtagaccggaagagaggacaagacagactttaggagaact 17195371  T
Q  337 aa 338  Q
    ||    
T  17195372 aa 17195373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 39930928 - 39930887
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagaca 303  Q
    ||||||| ||| |||||||||||||||||||| |||||||||    
T  39930928 attatacatgatggagctttgaagaaggaaagagcatagaca 39930887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 20918783 - 20918839
Alignment:
Q  276 agctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaag 332  Q
    ||||||| |||||||||| ||||| ||| | || |||||||||||| ||||||||||    
T  20918783 agctttggagaaggaaagagcatatacaagcagagaagtcaggacatacttaagaag 20918839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 385
Target Start/End: Original strand, 23887832 - 23887904
Alignment:
Q  313 gtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctag 385  Q
    |||||||||||||| |||||||  || || ||||| ||||||||||| |  |||||||| | |||||||||||    
T  23887832 gtcaggacagacttgagaagaatcaatcggcccccaaaagatagaaaccagctttgccatctcgacaatctag 23887904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 28173333 - 28173273
Alignment:
Q  244 aaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacag 304  Q
    ||||||||||||  ||| || ||| |||||||||||||||||||  |||| ||||||||||    
T  28173333 aaagattcaatggaagagataatatctgacggagctttgaagaaaaaaagagcatagacag 28173273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 29968605 - 29968645
Alignment:
Q  86 aacaaccgccaacaccatttacccatcaaagctaaattaaa 126  Q
    ||||||||||||||||||||||||| |||||| | ||||||    
T  29968605 aacaaccgccaacaccatttacccaacaaagcaatattaaa 29968645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 253; Significance: 1e-140; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 19 - 508
Target Start/End: Original strand, 28358454 - 28358945
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||| |||||| | |||||||||||||||||| ||||||    
T  28358454 caacctccctgcctcctcaccatatctcgccaccaacaccctgtaccaaaacccgcctctatctaccaacaatctccaacaccatttacccat-aaagct 28358552  T
Q  119 aaattaaattcttgcaa-ctacctcaccctagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
    |||||||||||   |   || |||||||| ||||||  ||||||||| |||||||| |||||||||||||| |||||| ||||||| |||||||||||||    
T  28358553 aaattaaattccctcgggctgcctcaccccagacctccaaactccttatttaaacacacagagctccaagcaatccagaaaatttttctgttatcctcac 28358652  T
Q  218 tacctccccnnnnnnntttatta--aacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtc 315  Q
    | |||||||       ||| ||   || | ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||| ||     
T  28358653 tccctccccaatattttttttttttaaaatagattcaatgagagagattatacctgacggagctttgaagaaggaaagagcatagacatgaagcgatgtt 28358752  T
Q  316 aggacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaa 415  Q
    |||||| ||||||||||||  |||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| |||||||||    
T  28358753 aggacaaacttaagaagaatcaagcgacccccgaaggatagaaaacgactttgccaccccgataatctagatttaatagtagacaccacatgttcccaaa 28358852  T
Q  416 aagctaattttctaggatcaccgccaatagagagaccaagatacaagaacggagttttgcccactttacaatttaaaactgatgcagcctcta 508  Q
    ||||||||||||||||| ||||  ||| |||||||||||||||||||||| || ||||||||||||||||||||| |||  |||| |||||||    
T  28358853 aagctaattttctaggaccaccttcaacagagagaccaagatacaagaacagaattttgcccactttacaatttagaacaaatgccgcctcta 28358945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 19 - 493
Target Start/End: Complemental strand, 3544677 - 3544202
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    |||||||||||||||||||||||||||||| | || ||||||||||||||| ||| ||||||||| |||||  ||||||||||||||||| | |||| |     
T  3544677 caacctccctgcctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctatctaccaacattcgccaacaccatttacctaacaaaaca 3544578  T
Q  119 aaattaaattcttgcaactacctcac-cctagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
     ||||||| ||   || ||| ||||| || |  |||  | ||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  3544577 caattaaactccctcagctatctcactcccaaccctccatactccttttgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcac 3544478  T
Q  218 tacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcag 317  Q
    | |||||||       ||||||||| | ||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||| |  || ||||     
T  3544477 tccctccccaaaaaaatttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaa 3544378  T
Q  318 gacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaa 417  Q
    ||||| ||| |||||||  || |||||||| ||||| ||| | ||||||||||||||||| |||||||  || |||||   || |||||||||||||||     
T  3544377 gacagtcttgagaagaatcaaccgacccccaaaagagagagagcgactttgccaccccgataatctagactttatagtcttcaacacaggttcccaaaag 3544278  T
Q  418 gctaattttctaggatcaccgccaatagagagaccaagatacaagaacggagttttgcccactttacaatttaaaa 493  Q
    |||||  |  | |||||||| |||||||| ||||| |||||||  ||||||  ||| || ||||| ||||||||||    
T  3544277 gctaacctcttcggatcaccaccaatagaaagacccagatacagaaacggaactttaccaactttgcaatttaaaa 3544202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 19 - 506
Target Start/End: Complemental strand, 19014560 - 19014070
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    ||||||||||| |||||||||||||||||||| ||||||   |||||||||||||||||| || | ||||| |||||||| ||||||||| | |||||||    
T  19014560 caacctccctgtctcctcaccatatctcgccaccaacacttaataccaaaacccacctctgtccaccaacatccgccaactccatttacctagcaaagct 19014461  T
Q  119 aaattaaattcttgcaactacctcaccctagacctttaaac-tccttttttaaa-caaacagagctccaagcgatccaggaaattttcctgttatcctca 216  Q
    |||||||| ||   |||||  || ||||   || ||  | | |||||   |||| |||| |||||||||||| |||||| |||||||| |||||||||||    
T  19014460 aaattaaactccctcaactgtctaacccccaacattccaccctccttcggtaaaacaaatagagctccaagcaatccagtaaattttcatgttatcctca 19014361  T
Q  217 ctacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtca 316  Q
    || |||||||       ||  ||||| | ||||||||||  ||| |||||| ||||| ||||||||||||||||||| ||||||||| ||||| | ||||    
T  19014360 ctccctccccaaaaaaattgtttaaaaatagattcaatggaagagattatatctgacagagctttgaagaaggaaagagcatagacaagaagccaggtca 19014261  T
Q  317 ggacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccacccc-gacaatctagttttaatagtaggcaccacaggttcccaaa 415  Q
     |||| |||| ||||  || || || ||||| |||||||||||  |||| ||||||||| |||| ||||||||||||||||  || || |||||||||||    
T  19014260 agacaaacttgagaaagaccaaccggcccccaaaagatagaaagtgactatgccacccccgacagtctagttttaatagtattcatcataggttcccaaa 19014161  T
Q  416 aagctaattttctaggatcaccgccaatagagagaccaagatacaagaacggagttttgcccactttacaatttaaaactgatgcagcctc 506  Q
    || ||||  ||| ||||||||| ||||| |||||||||||||||||||||||| |||  ||||||||||| |||||||  ||||| |||||    
T  19014160 aatctaaccttcgaggatcaccaccaatcgagagaccaagatacaagaacggaatttcacccactttacagtttaaaatagatgctgcctc 19014070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 19 - 452
Target Start/End: Complemental strand, 1248162 - 1247728
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    |||||||||| ||||||||||||||||||||| ||||| |||||||||||| |||||| |||| | ||| |  | ||||||| ||||||| | ||||||     
T  1248162 caacctccctacctcctcaccatatctcgccaccaacagcctataccaaaaaccacctttatccaccaatatacaccaacactatttacctaacaaagca 1248063  T
Q  119 aaattaaattcttgcaactacctcaccc-tagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
      |||||| ||    |||| |||||||| ||  ||   | ||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  1248062 ctattaaactcccttaactgcctcacccctaaccccccatactccttttgtaaacaaacagagctccaagcgatccatgaaattttcttgttatcctcac 1247963  T
Q  218 tacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcag 317  Q
      |||||||       ||||||||| | ||||||||||| ||| |||||||| |||| ||||||||| |||||||| ||||||||| | | ||| |||||    
T  1247962 gccctccccaaatttttttattaaaaatagattcaatgacagagattatacccgacgaagctttgaaaaaggaaagagcatagacatgtaacgaggtcag 1247863  T
Q  318 gacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaa 417  Q
    ||||||||| |||||||| || ||  | || ||||| ||||| ||||||||||||||||| | |||||  ||||| ||   || |||||||||||||||     
T  1247862 gacagacttgagaagaaccaaccgggctccaaaagagagaaagcgactttgccaccccgatagtctagacttaatggttttcaacacaggttcccaaaag 1247763  T
Q  418 gctaattttctaggatcaccgccaatagagagacc 452  Q
    |||||  |||   ||||||| |||||||| |||||    
T  1247762 gctaaccttcgcagatcaccaccaatagaaagacc 1247728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 56 - 392
Target Start/End: Original strand, 5809182 - 5809519
Alignment:
Q  56 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattcttgcaactacctcaccctagacctt- 154  Q
    ||||||||||| | ||||||| | || | ||||| ||||||||||||| |||| | ||||||   ||||||||| ||||||| ||||||||   ||| |     
T  5809182 accctataccagagcccacctttgtccaccaacatccgccaacaccatgtacctaacaaagcgctattaaattcctgcaacttcctcacccccaaccgtc 5809281  T
Q  155 taaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaat 254  Q
    || |||||||   |||||||||| |||||||||  | ||||||||||||||| ||||||||| | |||||||       ||||||||| | ||||| |||    
T  5809282 tatactccttacgtaaacaaacaaagctccaagaaaaccaggaaattttcctattatcctcattccctccccaattttttttattaaaaatagatttaat 5809381  T
Q  255 gagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagat 354  Q
    || | | |||||||||||||||||||||||||||||||| ||||||||||| | ||  |||||||||||||||||||| || ||  |||||||  ||||     
T  5809382 gacaaagattatacctgacggagctttgaagaaggaaagagcatagacaggtaacgcggtcaggacagacttaagaaggaccaactgacccccataagag 5809481  T
Q  355 agaaaacgactttgccaccccgacaatctagttttaat 392  Q
    | ||||| |||||||||||| |||||||||||||||||    
T  5809482 aaaaaacaactttgccaccctgacaatctagttttaat 5809519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 168 - 385
Target Start/End: Original strand, 20987869 - 20988085
Alignment:
Q  168 taaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaatgagagaaattata 267  Q
    |||||| | |||||||||||| | ||||||||||||||||||||||||||| |||||||       ||||||||| | ||||||||||| ||| || |||    
T  20987869 taaacagatagagctccaagcaacccaggaaattttcctgttatcctcactccctccccaaaaaaatttattaaaaatagattcaatgatagagatgata 20987968  T
Q  268 cctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacgacttt 367  Q
    | |||||||||||||||||||||||| ||||||||||| ||||| ||||||||| |||| |||||||| || ||| ||||||| || ||||||| |||||    
T  20987969 catgacggagctttgaagaaggaaagagcatagacaggtagcgaggtcaggacacacttgagaagaaccaaccga-ccccgaaggagagaaaacaacttt 20988067  T
Q  368 gccaccccgacaatctag 385  Q
     |||||||||||||||||    
T  20988068 tccaccccgacaatctag 20988085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 234 - 416
Target Start/End: Original strand, 6051383 - 6051565
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||||||| ||||||    
T  6051383 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 6051482  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaa 416  Q
    |  || ||||| ||||||||||| || ||||||||||| || |||||||||| |||||||  |  ||||||||||||||||||    
T  6051483 atcaaacgaccaccgaaagataggaaccgactttgccaaccagacaatctagatttaatacgatccaccacaggttcccaaaa 6051565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 56 - 413
Target Start/End: Complemental strand, 13867372 - 13867021
Alignment:
Q  56 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattcttgcaactacctcaccctagaccttt 155  Q
    ||||||||||| || ||||||||||| | ||||| |||||||||||||||||| | ||||||   ||||||||| ||||||| ||||||||    ||       
T  13867372 accctataccataaaccacctctatccaccaacatccgccaacaccatttacctaacaaagcactattaaattcctgcaacttcctcaccc----cca-- 13867279  T
Q  156 aaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaatg 255  Q
    || |||| |   ||| ||||| |||||| |||| | ||||||||||||||||||||||||||| ||||||          ||||||| | ||||||||||    
T  13867278 aacctccatacgtaagcaaaccgagctctaagcaacccaggaaattttcctgttatcctcactccctcccaaaaaaaaaatattaaaaatagattcaatg 13867179  T
Q  256 agagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagata 355  Q
    | ||| ||||||||||||||||| |||||||||||||| ||||| ||||| |  | ||||||||||||||||||||| || || ||||| || ||||| |    
T  13867178 acagagattatacctgacggagccttgaagaaggaaagagcatatacaggtaatgcagtcaggacagacttaagaaggaccaaccgacctccaaaagaga 13867079  T
Q  356 gaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttccca 413  Q
    ||||||||||||| |||||| ||| ||||| |||||| ||   || ||||||||||||    
T  13867078 gaaaacgactttgtcaccccaacagtctagatttaattgttttcaacacaggttccca 13867021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 19 - 347
Target Start/End: Complemental strand, 40563134 - 40562805
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    ||||||| ||||||| || ||||||||||||| ||| || |||||||| |||||  ||||||| | ||||| || ||||||| | || || | ||| ||     
T  40563134 caacctctctgcctcatctccatatctcgccaccaaaactctataccacaacccgtctctatccaccaacatcctccaacacaacttgcctaacaaggca 40563035  T
Q  119 aaattaaattcttgcaactacctcaccc-tagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
    | ||| ||||| | |||||||||||||| ||  |||  |  ||||||||  | ||||| |||||||||||| || |||||||||||||||||| ||||||    
T  40563034 atattgaattccttcaactacctcacccctaaccctccatcctccttttgaagacaaatagagctccaagcaattcaggaaattttcctgttaacctcac 40562935  T
Q  218 tacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcag 317  Q
      ||| |||       ||| ||||| | |||||||||||||||||| ||||||||| |||||||||| || ||||| ||||||||||||| ||| |||||    
T  40562934 accctgcccaaaaaattttgttaaaaatagattcaatgagagaaatgatacctgacagagctttgaaaaaagaaagcgcatagacaggaaccgaggtcag 40562835  T
Q  318 gacagacttaagaagaactaagcgaccccc 347  Q
    |||| |||| ||||||| ||| || |||||    
T  40562834 gacaaactttagaagaattaaacggccccc 40562805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 56 - 393
Target Start/End: Complemental strand, 32352849 - 32352513
Alignment:
Q  56 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattcttgcaactacctcaccct-agacctt 154  Q
    ||||||||||| || ||||||||||| | ||||| ||||||||||||||| || | ||||||||||||||| || | ||| | ||||||||  | |||      
T  32352849 accctataccacaaaccacctctatccaccaacatccgccaacaccattttcctaacaaagctaaattaaactccttcaatttcctcacccccaaaccgc 32352750  T
Q  155 taaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaat 254  Q
     | |||||||||||||||||||||    ||||   | ||| ||||||||||| ||||||||||| || |||        |  | |||||||||| |||||    
T  32352749 catactccttttttaaacaaacagtttgccaacttaaccaagaaattttcctattatcctcactcccccccaaaaaaaat--aataaacaaagaatcaat 32352652  T
Q  255 gagagaa-attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaaga 353  Q
     |||| | ||||||||||  |||||||||||||||||||||||||||||||| || || |||| |||||| || || ||||| |||||||| || |||||    
T  32352651 -agaggagattatacctgctggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaaga 32352553  T
Q  354 tagaaaacgactttgccaccccgacaatctagttttaata 393  Q
     ||||| ||||| | ||| ||||||| ||||| |||||||    
T  32352552 gagaaaccgactattccaacccgacagtctagatttaata 32352513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 234 - 393
Target Start/End: Original strand, 35541814 - 35541973
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||||||||||||| || | ||||||||| ||||| ||||||    
T  35541814 tttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaaga 35541913  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaata 393  Q
    |  || || || || || || ||||| ||||||||||| || | |||||||  |||||||    
T  35541914 atcaaacggccacctaaggaaagaaaccgactttgccaaccagccaatctatatttaata 35541973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 241 - 392
Target Start/End: Complemental strand, 47622430 - 47622279
Alignment:
Q  241 aacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagc 340  Q
    |||| ||||||||||  ||| |||||| |||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||| | || ||    
T  47622430 aacagagattcaatggaagagattatatctgacggagctttgaaaaaggaaagtgcatagacaggaagagcagtcaggacagactttagaaggattaggc 47622331  T
Q  341 gacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaat 392  Q
    |||| || ||||| ||||| |||||  |||| || |||||||||| ||||||    
T  47622330 gaccaccaaaagagagaaaccgactacgccaaccagacaatctagatttaat 47622279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 262 - 506
Target Start/End: Original strand, 5497894 - 5498138
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaac 361  Q
    ||||||||||| ||||||||||||||||||| |||||||||||| |  || ||||||||||| || |||||||| |||||||| || ||||||||||| |    
T  5497894 attatacctgatggagctttgaagaaggaaattgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaaacc 5497993  T
Q  362 gactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaagctaattttctaggatcaccgccaatagagagaccaagatacaa 461  Q
    |||| | ||| ||||||| ||||| |||||||  |  ||| | ||||||||| |||   ||| ||| ||||| ||| |||||||  | ||| ||||||||    
T  5497994 gactattccaacccgacagtctagatttaatacgattcacaataggttcccagaaacgcaatcttcgaggattaccaccaataggcatacccagatacaa 5498093  T
Q  462 gaacggagttttgcccactttacaatttaaaactgatgcagcctc 506  Q
    ||| |||   || || ||||||||| |||| || || ||||||||    
T  5498094 gaaaggaacgttacctactttacaacttaacacggaagcagcctc 5498138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 51052695 - 51052820
Alignment:
Q  268 cctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacgacttt 367  Q
    |||| ||||||||||||||||||||||||||||||||| || | ||||||||| ||||| || ||||  || ||||| ||||||||||| || |||||||    
T  51052695 cctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacggactttagtagaatcaaacgaccaccgaaagataggaaccgacttt 51052794  T
Q  368 gccaccccgacaatctagttttaata 393  Q
    |||| || |||||||||| |||||||    
T  51052795 gccaaccagacaatctagatttaata 51052820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 38070396 - 38070602
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    ||||| ||| |||||||||||||| || |||| ||| || |||||||| ||||| |||||||| | ||||||||||||||||||||| |  |  ||| |     
T  38070396 caaccgcccagcctcctcaccataccttgccaccaaaactctataccacaaccctcctctatccaccaacaaccgccaacaccattttcttaataaaaca 38070495  T
Q  119 aaattaaattcttgcaactacctcaccctagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcact 218  Q
    | ||||||||| | |||||  ||||||| | |||   |   |||||   ||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  38070496 atattaaattcattcaactgtctcaccccaaacccccatcttccttacgtaaacaaacagtgctccaagcgatccatgaaattttcctgttatcctcact 38070595  T
Q  219 acctccc 225  Q
     ||||||    
T  38070596 ccctccc 38070602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 235 - 392
Target Start/End: Original strand, 20796441 - 20796598
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    ||||| |||||||||||||||  ||| ||||||||||| |||||||| ||||||||||| |||||||||||||  |||||||| || |  || | ||| |    
T  20796441 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacaggaaaagaagtcagaactgctttcaaaagga 20796540  T
Q  335 ctaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaat 392  Q
    | |||||||| ||||| || ||||| ||||| | ||| || |||||||||| ||||||    
T  20796541 ccaagcgaccaccgaacgagagaaatcgactattccaacctgacaatctagatttaat 20796598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 258 - 335
Target Start/End: Original strand, 45271045 - 45271122
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||| || |||| |||||||||||| |||||    
T  45271045 agaaattatacctgacggagccttgaagaaggaaagagcatagacaggaagagaggtcaagacagacttaaggagaac 45271122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 262 - 393
Target Start/End: Complemental strand, 48072758 - 48072627
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaac 361  Q
    ||||||||||  |||||||||||||||||||| ||||||||||| || || |||| |||||| || || ||||| |||||||| || ||||| ||||| |    
T  48072758 attatacctgctggagctttgaagaaggaaagcgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaaacc 48072659  T
Q  362 gactttgccaccccgacaatctagttttaata 393  Q
    |||| | ||| ||||||| ||||| |||||||    
T  48072658 gactattccaacccgacagtctagatttaata 48072627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 235 - 365
Target Start/End: Complemental strand, 25504351 - 25504221
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    |||||||| |||||||||| |  ||| |||||||||||||||||||||||||| ||||| |||||||||||||| || ||||  ||||| || |||||||    
T  25504351 ttattaaataaagattcaagggtagagattatacctgacggagctttgaagaaagaaagagcatagacaggaagagaggtcaacacagatttgagaagaa 25504252  T
Q  335 ctaagcgacccccgaaagatagaaaacgact 365  Q
    | || || || || ||||| || ||||||||    
T  25504251 ccaaacggccaccaaaagagaggaaacgact 25504221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 52692035 - 52692225
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    ||||||||| |||||||||||||| | ||||| ||||||||||||||| |||||  ||||||| | ||||| || |||||||||||| || |  |||||     
T  52692035 caacctcccagcctcctcaccataccgcgccaccaacaccctataccagaacccctctctatccaccaacatcctccaacaccattttcctaataaagca 52692134  T
Q  119 aaattaaattcttgcaactacctcac-cctagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgt 208  Q
     ||||||||||    || | |||||| ||||  |||  ||||||||||  || |||||| ||||||||||| || ||||||||||||||||    
T  52692135 caattaaattcccttaattgcctcactcctaatcctccaaactcctttcgtagacaaaccgagctccaagcaattcaggaaattttcctgt 52692225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 392
Target Start/End: Original strand, 39431067 - 39431224
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    ||||| |||||||||||||||  ||| ||||||||||| |||||||| || |||||||| ||||||||||| | |||| ||||||| |  || | ||| |    
T  39431067 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaataaggaaagagcatagacaggcaacgaattcaggactgctttcaaaagga 39431166  T
Q  335 ctaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaat 392  Q
    | |||||||| ||||| || ||||| ||||| | ||| || |||||||||| ||||||    
T  39431167 ccaagcgaccaccgaacgagagaaaccgactattccaacctgacaatctagatttaat 39431224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 235 - 326
Target Start/End: Original strand, 19042904 - 19042995
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagactt 326  Q
    |||||||||||||||||||| | ||| ||||||||||| ||||||  |||||||||||| ||||| ||||| || |||| ||||||||||||    
T  19042904 ttattaaacaaagattcaataaaagagattatacctgatggagctcagaagaaggaaagggcataaacaggtagagaagacaggacagactt 19042995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 392
Target Start/End: Original strand, 26721441 - 26721571
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaac 361  Q
    ||||||||||| |||||||||||||||||||| ||||||||||| || || ||||||||| |||| | |||||| |  || || ||  |||||| |||||    
T  26721441 attatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcaggacaaactttaaaagaaccagacggccgccataagataaaaaac 26721540  T
Q  362 gactttgccaccccgacaatctagttttaat 392  Q
    |||| | ||| || ||||| |||||||||||    
T  26721541 gactattccaaccagacaacctagttttaat 26721571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 60 - 225
Target Start/End: Original strand, 45795880 - 45796046
Alignment:
Q  60 tataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattcttgcaactacctca-ccctagacctttaaa 158  Q
    ||||||| || |||||| |||| | ||||| |||||||||||||||||| | ||||||   ||||||||| ||||||| ||||| ||| |  |||  | |    
T  45795880 tataccataaaccacctttatccaccaacatccgccaacaccatttacctaacaaagcactattaaattcctgcaacttcctcacccccaaccctccata 45795979  T
Q  159 ctccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccc 225  Q
    ||||||   ||||||||||||||||||||| | |||  ||| |||||||||||||||||| ||||||    
T  45795980 ctccttacgtaaacaaacagagctccaagcaacccaaaaaaatttcctgttatcctcactccctccc 45796046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 235 - 392
Target Start/End: Complemental strand, 49264324 - 49264167
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    ||||| |||||||||||||||  ||| ||||||||||| |||||||| ||||| ||||| ||||||||||| | ||||||||| || |  || | ||| |    
T  49264324 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaagaaagagcatagacaggcaacgaagtcagaactgctttcaaaagga 49264225  T
Q  335 ctaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaat 392  Q
    | |||||||| ||||| || ||||| ||||| | ||| ||  ||||||||| ||||||    
T  49264224 ccaagcgaccaccgaacgagagaaaccgactattccaacctaacaatctagatttaat 49264167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 326
Target Start/End: Original strand, 17708866 - 17708930
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagactt 326  Q
    ||||||||||| |||||||||||||||||||||||||||||||| || || ||||| ||||||||    
T  17708866 attatacctgatggagctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagactt 17708930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 33260031 - 33259961
Alignment:
Q  265 atacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    |||||||| |||||||||||||||||||| ||||||||||| || ||  ||| ||||||||||||||||||    
T  33260031 atacctgagggagctttgaagaaggaaagagcatagacagggagagagatcaagacagacttaagaagaac 33259961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 33280190 - 33280120
Alignment:
Q  265 atacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    |||||||| |||||||||||||||||||| ||||||||||| || ||  ||| ||||||||||||||||||    
T  33280190 atacctgagggagctttgaagaaggaaagagcatagacagggagagagatcaagacagacttaagaagaac 33280120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 27393525 - 27393442
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacacca 102  Q
    |||||||||||||||||||||||| || || | ||||||| ||||||| || || |||||||| | |||||||| |||||||||    
T  27393525 caacctccctgcctcctcaccatacctagcaaccaacaccatataccataaacctcctctatcaaccaacaacctccaacacca 27393442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 277 - 335
Target Start/End: Original strand, 27889548 - 27889606
Alignment:
Q  277 gctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||| |||||    
T  27889548 gctttgaagaaggaaatggcatacacaggaagcgaggtcaggacagacttaaggagaac 27889606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 335
Target Start/End: Complemental strand, 22191114 - 22191041
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    ||||||||||| || ||| ||||||||||||  |||||||||||||| |||| || |||||||||||| |||||    
T  22191114 attatacctgatggtgctctgaagaaggaaaaagcatagacaggaagagaagacaagacagacttaaggagaac 22191041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 45270805 - 45270894
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacc 108  Q
    |||||||||  |||||||| |||||||||||| ||| | ||||||||| || | ||  || |||||||||| ||||||||||||||||||    
T  45270805 caacctcccatcctcctcatcatatctcgccaccaaaatcctataccataaactactcctctctatcaacagccgccaacaccatttacc 45270894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 359
Target Start/End: Original strand, 3074529 - 3074649
Alignment:
Q  239 taaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaa 338  Q
    |||| |||||||||| |  ||| ||||||||||| |||||| ||||||||||||| ||||||||| |||| || | ||||| |  |||||| ||||| |     
T  3074529 taaataaagattcaagggtagagattatacctgatggagctctgaagaaggaaagggcatagacatgaagagaggacaggaaaaccttaaggagaaccag 3074628  T
Q  339 gcgacccccgaaagatagaaa 359  Q
     ||||| || |||||||||||    
T  3074629 acgaccaccaaaagatagaaa 3074649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 36099745 - 36099812
Alignment:
Q  265 atacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaag 332  Q
    |||||||||||||| ||||| || ||||| ||||| ||||||||||| | |||||||||||| |||||    
T  36099745 atacctgacggagccttgaaaaaagaaagagcataaacaggaagcgacgacaggacagacttcagaag 36099812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 355
Target Start/End: Original strand, 27364947 - 27365037
Alignment:
Q  265 atacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagata 355  Q
    ||||||||| |||||||||| || ||||| || || ||||| ||||| | ||||||||| || || | ||| |||||||||||||||||||    
T  27364947 atacctgacagagctttgaaaaaagaaagggcgtaaacaggcagcgacgacaggacagatttcagtaaaaccaagcgacccccgaaagata 27365037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 48072970 - 48072900
Alignment:
Q  56 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaa 126  Q
    |||| |||||| || ||||||||||| | ||||| ||||||||||||||| || | |||||||||||||||    
T  48072970 acccgataccacaaaccacctctatccaccaacatccgccaacaccattttcctaacaaagctaaattaaa 48072900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 7396079 - 7396010
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacag 304  Q
    ||||| || |||||||||| |  ||| ||||||||||| ||||||||||||||||||||  |||||||||    
T  7396079 ttatttaataaagattcaacggaagagattatacctgatggagctttgaagaaggaaagatcatagacag 7396010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 262 - 335
Target Start/End: Original strand, 21409049 - 21409122
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    ||||||||||| || ||| ||||||||||||   ||||||||||||| || | ||||||||||||||| |||||    
T  21409049 attatacctgatggtgctctgaagaaggaaaaaacatagacaggaagagaggacaggacagacttaaggagaac 21409122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 30650348 - 30650287
Alignment:
Q  265 atacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagactt 326  Q
    |||||| | |||||||||||||||||||| ||||||||||| ||||| ||||| || |||||    
T  30650348 atacctaagggagctttgaagaaggaaagcgcatagacagggagcgaggtcagcaccgactt 30650287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 304
Target Start/End: Complemental strand, 10710558 - 10710494
Alignment:
Q  239 taaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacag 304  Q
    |||| ||||| ||||||  ||| ||||||||||| |||||||||||||||| ||| ||||||||||    
T  10710558 taaataaagaatcaatggaagagattatacctgatggagctttgaagaagg-aagcgcatagacag 10710494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 335
Target Start/End: Complemental strand, 23450986 - 23450886
Alignment:
Q  235 ttattaaacaaagattcaatgagag-aaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    |||||||| | ||||||||| |||| |||| |||||||||||||| ||||| || ||||| ||||| ||||||| ||| | ||| |||||||| | ||||    
T  23450986 ttattaaaaagagattcaat-agaggaaatgatacctgacggagccttgaaaaaagaaagagcataaacaggaaacgatgacagtacagacttcaaaaga 23450888  T
Q  334 ac 335  Q
    ||    
T  23450887 ac 23450886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 42475227 - 42475166
Alignment:
Q  265 atacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagactt 326  Q
    |||||||||||||| |||||||||||||| ||||| ||||| | ||| | |||| |||||||    
T  42475227 atacctgacggagccttgaagaaggaaagggcataaacaggcaacgatgacagggcagactt 42475166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 48434942 - 48435019
Alignment:
Q  246 agattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacaga 323  Q
    ||||||||||  ||| ||||||||||  ||||||||||| |||||||| || |||||||| |  |||| |||||||||    
T  48434942 agattcaatggaagagattatacctgcgggagctttgaaaaaggaaagagcgtagacaggcaatgaagacaggacaga 48435019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 33142778 - 33142678
Alignment:
Q  30 cctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattc 129  Q
    |||||||||| || |  |||| ||||||||||||||| || ||  ||||||| |  ||||||| ||||||||||||||| |  | ||| |||||||||||    
T  33142778 cctcctcaccgtaacgggccaccaacaccctataccacaagccttctctatcaactaacaacctccaacaccatttacctaagagagccaaattaaattc 33142679  T
Q  130 t 130  Q
    |    
T  33142678 t 33142678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 338
Target Start/End: Complemental strand, 34548117 - 34548017
Alignment:
Q  238 ttaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaacta 337  Q
    ||||| |||||||||||   |||||| |||||||  ||||||||||||||||||||    ||||| ||||| || | || ||||||||| || |||||||    
T  34548117 ttaaataaagattcaatagaagaaatgatacctgcgggagctttgaagaaggaaagaaagtagaccggaagagaggacaagacagactttaggagaacta 34548018  T
Q  338 a 338  Q
    |    
T  34548017 a 34548017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 43914135 - 43914191
Alignment:
Q  237 attaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaag 293  Q
    |||| ||||||||||||||  ||||||||||||||  || || ||||||||||||||    
T  43914135 attatacaaagattcaatggaagaaattatacctgtgggggccttgaagaaggaaag 43914191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 19 - 499
Target Start/End: Original strand, 9690986 - 9691468
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    ||||||||| ||||||||||||||||| || |  | |||||||||||||||||||| |||||| | |||||||| ||||||||||||||||| ||| | |    
T  9690986 caacctcccagcctcctcaccatatctagctactagcaccctataccaaaacccacatctatccaccaacaacctccaacaccatttacccaacaaggtt 9691085  T
Q  119 aaattaaattcttgcaactacctcaccct-agacctttaaactcctttttt-aaacaaacagagctccaagcgatccaggaaattttcctgttatcctca 216  Q
    |||||||||||   ||| | ||||||||  ||||||   |||||||||||| ||||||| |||||||||||| || |||| |||||| ||||||||||||    
T  9691086 aaattaaattccctcaagtgcctcacccccagacctcctaactcctttttttaaacaaatagagctccaagcaattcagggaatttttctgttatcctca 9691185  T
Q  217 ctacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtca 316  Q
    ||||| ||||       |||  |||| | |||||||| || ||| |||||||||||| || |||||||||||||||| ||||| |||||||||||||| |    
T  9691186 ctaccaccccaaattttttttgtaaaaatagattcaaagatagagattatacctgacagaactttgaagaaggaaagagcataaacaggaagcgaagtaa 9691285  T
Q  317 ggacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaa 416  Q
    |||||||||| ||||||||||| |||||| | || |||||||||||||||||||||||||| ||||||| |||||| |||| |||||| || ||||||||    
T  9691286 ggacagacttgagaagaactaaccgaccctcaaaggatagaaaacgactttgccaccccgataatctagatttaatggtagacaccactgggtcccaaaa 9691385  T
Q  417 agctaattttctaggatcaccgccaatagagagaccaagatacaagaacggagttttgcccactttacaatttaaaactgatg 499  Q
     || || || ||||||||||| ||||| ||||| ||||||||||  |||| | |||| |||||||||||||||||||| ||||    
T  9691386 cgccaacttcctaggatcacctccaatcgagagtccaagatacagaaacgaaattttacccactttacaatttaaaacagatg 9691468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 234 - 416
Target Start/End: Complemental strand, 23641951 - 23641769
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||||||| ||||||    
T  23641951 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 23641852  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaa 416  Q
    |  || ||||| ||||||||||| || ||||||||||| || |||||||||| |||||||  |  ||||||||||||||||||    
T  23641851 atcaaacgaccaccgaaagataggaaccgactttgccaaccagacaatctagatttaatacgatccaccacaggttcccaaaa 23641769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 234 - 416
Target Start/End: Complemental strand, 23647609 - 23647427
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||||||| ||||||    
T  23647609 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 23647510  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaa 416  Q
    |  ||  |||| ||||||||||| || ||||||||||| || |||||||||| |||||||  |  ||||||||||||||||||    
T  23647509 atcaaatgaccaccgaaagataggaaccgactttgccaaccagacaatctagatttaatacgatccaccacaggttcccaaaa 23647427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 20 - 493
Target Start/End: Original strand, 2072105 - 2072579
Alignment:
Q  20 aacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagcta 119  Q
    ||||||| ||||||||||||||||||||||| || |||||||||||| | ||| |||||||| | ||||| | |||| ||||||||||| |  ||||| |    
T  2072105 aacctccttgcctcctcaccatatctcgccaccagcaccctataccacatccctcctctatccaccaacatctgccatcaccatttacctaataaagcaa 2072204  T
Q  120 aattaaattcttgcaactacctca-ccctagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcact 218  Q
     ||||||| |   |||||  |||| ||| | | ||  | |||| |    ||||  || ||||||||||||||||||| |||||||| |||| ||||| ||    
T  2072205 tattaaatcccctcaactgtctcaaccccaaatctccatactcttgacgtaaagtaatagagctccaagcgatccagtaaattttcatgttgtcctcgct 2072304  T
Q  219 acctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcagg 318  Q
     |||||||       |||   ||| | ||| ||||||| ||| |||||| ||||||||||||||||||| ||||| ||||||||| | || || |||| |    
T  2072305 ccctccccaattttttttgaaaaaaatagagtcaatgaaagagattatatctgacggagctttgaagaaagaaagagcatagacatgcagagaggtcatg 2072404  T
Q  319 acagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaag 418  Q
    ||| | || |||||||| || || || ||||| || ||||||||||||||||||||||| | |||||  ||||| |||  ||| || |||||||||||||    
T  2072405 acaaatttgagaagaaccaaccggcctccgaaggagagaaaacgactttgccaccccgatagtctagacttaatggtattcacaacgggttcccaaaaag 2072504  T
Q  419 ctaattttctaggatcaccgccaatagagagaccaagatacaagaacggagttttgcccactttacaatttaaaa 493  Q
    ||||  ||||||||||||   |||| |||||||| | |||||| ||| || | || ||||| |||||||||||||    
T  2072505 ctaaccttctaggatcactttcaatcgagagacccaaatacaaaaacagaatcttacccaccttacaatttaaaa 2072579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 234 - 416
Target Start/End: Original strand, 47419584 - 47419766
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| |||||||||| |||||||||||||||||| |||||||||||||| || | ||||||||| ||||| || |||    
T  47419584 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggagagtgcatagacagggagagcagtcaggaccgactttagtaga 47419683  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaa 416  Q
    |  || ||||| ||||||||||| || ||||||||||| || |||||||||| |||||||  |  ||||||||||||||||||    
T  47419684 atcaaacgaccaccgaaagataggaaccgactttgccaaccagacaatctagatttaatacgatccaccacaggttcccaaaa 47419766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 234 - 393
Target Start/End: Complemental strand, 1827900 - 1827741
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||| ||||| ||||||    
T  1827900 tttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggaagagcagtcaggacggactttagaaga 1827801  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaata 393  Q
    |  || || || |||||||| || || ||||||||||| || |||||||||| |||||||    
T  1827800 atcaaacggccaccgaaagagaggaaccgactttgccaaccagacaatctagatttaata 1827741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 234 - 416
Target Start/End: Original strand, 19756047 - 19756229
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| |||||||||||| ||| |||||| |||||||||||||||||||| |||| ||||||||| ||||| || |||    
T  19756047 tttattaaacaaagattcaatggaagagattatacctgacagagttttgaaaaaggaaagtgcatagacaggtagcgcagtcaggacggactttagtaga 19756146  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaa 416  Q
    |  || ||||| |||||||| || || ||||||||||| || |||||||||| |||||||  |  ||| ||||||||||||||    
T  19756147 atcaaacgaccaccgaaagaaaggaaccgactttgccaaccagacaatctagatttaatacgattcacaacaggttcccaaaa 19756229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 234 - 416
Target Start/End: Complemental strand, 19783759 - 19783577
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| |||||||||||| ||| |||||| |||||||||||||||||||| |||| ||||||||| ||||| || |||    
T  19783759 tttattaaacaaagattcaatggaagagattatacctgacagagttttgaaaaaggaaagtgcatagacaggtagcgcagtcaggacggactttagtaga 19783660  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaa 416  Q
    |  || ||||| |||||||| || || ||||||||||| || |||||||||| |||||||  |  ||| ||||||||||||||    
T  19783659 atcaaacgaccaccgaaagaaaggaaccgactttgccaaccagacaatctagatttaatacgattcacaacaggttcccaaaa 19783577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 56 - 332
Target Start/End: Complemental strand, 43516287 - 43516010
Alignment:
Q  56 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattcttgcaactacctcaccctagaccttt 155  Q
    ||||||||||| || |||||||||||   ||||| | |||||||||||||||| | ||||||   ||||||||| ||||||| ||||||||   ||| |     
T  43516287 accctataccataaaccacctctatccgccaacatctgccaacaccatttacctaacaaagcactattaaattcctgcaacttcctcacccccaaccctc 43516188  T
Q  156 aa-actccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntt-tattaaacaaagattcaa 253  Q
     | |||||||   ||| ||||||||||||||||| | |||||||||||||||||||||| |||| |||||||       || ||||||| | ||||||||    
T  43516187 catactccttacgtaagcaaacagagctccaagcaacccaggaaattttcctgttatcc-cactccctccccaatttttttatattaaaaatagattcaa 43516089  T
Q  254 tgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaag 332  Q
    ||| ||| ||||||||||| ||||| |||||||||||||| ||||||||||| |  | ||||||||||||||| |||||    
T  43516088 tgacagagattatacctgatggagccttgaagaaggaaagagcatagacaggtaatgcagtcaggacagactttagaag 43516010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 59 - 379
Target Start/End: Original strand, 19115040 - 19115361
Alignment:
Q  59 ctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattcttgcaactacctcaccc-tagacctttaa 157  Q
    ||||||||||| ||||| ||||| |  ||||||| |||||||||||| || |  ||||| | |||||| || | |||||  || |||| ||  |||  ||    
T  19115040 ctataccaaaatccacccctatccactaacaacctccaacaccatttccctaataaagcaatattaaactccttcaactgtctaacccctaaccctccaa 19115139  T
Q  158 actccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaatgag 257  Q
    |||||||||  | ||||||||| |||||||| ||||| || ||||||||   ||||||||  || ||||        |||||||| ||||||||||||      
T  19115140 actccttttggagacaaacagaactccaagctatccaagatattttcctacaatcctcacccccaccccaaaaaaaattattaaataaagattcaatggt 19115239  T
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagataga 357  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||  || ||||||| |||||  || |||||||| ||||| || || ||||| ||     
T  19115240 agagattatacctgacggagctttgaagaaggaaagtgcatagacagacagagaagtcaagacagctttgagaagaaccaagcggccaccaaaagagagg 19115339  T
Q  358 aaacgactttgccaccccgaca 379  Q
    |||||||| | ||| |||||||    
T  19115340 aaacgactattccaacccgaca 19115361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 234 - 393
Target Start/End: Complemental strand, 29553161 - 29553002
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||| ||||||||||||  ||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||| |||||  || ||||||    
T  29553161 tttattaaataaagattcaatggaagagattatacctgacggagctttgaagaaggaaagagcatagacaggcagagaagtcaagacagctttgagaaga 29553062  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaata 393  Q
    || || ||||| || ||||| || |||| ||| | ||| ||||||| ||||||| |||||    
T  29553061 accaaacgaccaccaaaagaaaggaaacaactattccaacccgacagtctagttctaata 29553002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 56 - 393
Target Start/End: Complemental strand, 23873015 - 23872678
Alignment:
Q  56 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattcttgcaactacctcaccct-agacctt 154  Q
    |||| |||||| || ||||||||||||| ||||| ||||||||||||||| || | ||||||||||||||| || | ||| | ||  ||||  | |||      
T  23873015 acccgataccacaaaccacctctatctaccaacatccgccaacaccattttcctaacaaagctaaattaaactccttcaatttccgtacccccaaaccgc 23872916  T
Q  155 taaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaat 254  Q
     | |||||||||||||||||||||    ||||   | ||| ||||||||||| ||||||||||| || ||||        ||| |||||||||| |||||    
T  23872915 catactccttttttaaacaaacagtttgccaacttaaccaagaaattttcctattatcctcactccc-ccccaaaaaaaattaataaacaaagaatcaat 23872817  T
Q  255 gagagaa-attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaaga 353  Q
     |||| | ||||||||||  |||||||||||||||||||||||||||||||| || || |||| |||||| || || ||||| |||||||| || |||||    
T  23872816 -agaggagattatacctgctggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaaga 23872718  T
Q  354 tagaaaacgactttgccaccccgacaatctagttttaata 393  Q
     ||||| ||||| | ||| ||||||| ||||| |||||||    
T  23872717 gagaaaccgactattccaacccgacagtctagatttaata 23872678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 235 - 393
Target Start/End: Original strand, 48312875 - 48313033
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    ||||| |||||||||||||||  ||| ||||||||||||||||||||||| ||||||||||||||||||||||| | ||||| |||  | || |||||||    
T  48312875 ttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcatgacgaatttgagaagaa 48312974  T
Q  335 ctaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaata 393  Q
     ||  ||||  || ||||| || || ||||| ||||| || ||||||||||||||||||    
T  48312975 ttagacgacgaccaaaagaaaggaaccgactatgccaaccagacaatctagttttaata 48313033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 262 - 393
Target Start/End: Original strand, 55299429 - 55299560
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaac 361  Q
    ||||||||||  |||||||||||||||||||||||||||||||| || || |||| |||||| || || ||||| |||||||| || ||||| ||||| |    
T  55299429 attatacctgttggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaaacc 55299528  T
Q  362 gactttgccaccccgacaatctagttttaata 393  Q
    |||| | ||| ||||||||||||| |||||||    
T  55299529 gactattccaacccgacaatctagatttaata 55299560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 309
Target Start/End: Complemental strand, 54482519 - 54482445
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagc 309  Q
    ||||| |||||||||||||||  ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54482519 ttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggaagc 54482445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 19733347 - 19733250
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaag 332  Q
    ||||| || ||||||||||||  ||| ||||||||||||||||||||||| |||||||| |||||||||||||| | |||||||||||| || |||||    
T  19733347 ttatttaataaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacaggaagggcagtcaggacagatttgagaag 19733250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 239 - 365
Target Start/End: Original strand, 34976726 - 34976852
Alignment:
Q  239 taaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaa 338  Q
    |||| ||||||||||||  ||| ||||||||||| |||||||||||||||||||| ||||| ||||| || || |||||||||||||| | |||||| ||    
T  34976726 taaataaagattcaatggaagagattatacctgatggagctttgaagaaggaaagcgcataaacaggcagagaggtcaggacagactttaaaagaaccaa 34976825  T
Q  339 gcgacccccgaaagatagaaaacgact 365  Q
     || || || ||||||| |||| ||||    
T  34976826 acggccgccaaaagataaaaaatgact 34976852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 19648476 - 19648576
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    |||||||| |||||||||| |  |||||||||||||||||||||||||||||| ||||| ||||||||||| || || ||||  ||||| || |||||||    
T  19648476 ttattaaataaagattcaagggtagaaattatacctgacggagctttgaagaaagaaagagcatagacaggtagagaggtcaacacagatttgagaagaa 19648575  T
Q  335 c 335  Q
    |    
T  19648576 c 19648576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 15741000 - 15741063
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgca 297  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||||| ||||||||||||    
T  15741000 tttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgca 15741063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 309
Target Start/End: Complemental strand, 55725271 - 55724992
Alignment:
Q  30 cctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattc 129  Q
    ||||| ||||||| || |||| ||||||||||||||| || ||| |||||||||  ||||||| |||||||||||| || | |||||| || ||||| ||    
T  55725271 cctccacaccatacctagccaccaacaccctataccataatccatctctatctactaacaacctccaacaccatttccctaacaaagcaaagttaaactc 55725172  T
Q  130 ttgcaactacctcac-cctagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnn 228  Q
    |  ||||  ||| || || |  |||  | ||||| |  | ||||| | |||  ||||| | ||||| |||||||| || || ||||||||||| ||||      
T  55725171 tctcaacctcctaacacccaaccctccatactccctcctcaaacacaaagaattccaaccaatccaagaaatttttcttttttcctcactacc-ccccaa 55725073  T
Q  229 nnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagc 309  Q
         |||||| |||||||||||||||  ||| |||||||| |||||||||||||| ||||||||  ||||||||||||||    
T  55725072 aaaaatttatttaacaaagattcaatggaagagattatacccgacggagctttgaaaaaggaaagaacatagacaggaagc 55724992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 323
Target Start/End: Complemental strand, 7662665 - 7662579
Alignment:
Q  237 attaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacaga 323  Q
    |||||| |||||||||| |  ||||||||||||||| |||||||||||||| ||||| ||||||||||| || ||||||| ||||||    
T  7662665 attaaataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 7662579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 389
Target Start/End: Original strand, 8935855 - 8936009
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    |||||||| ||| ||||||||  ||| |||||||||||||||||||||||||||||||| ||||||||||  || || ||||  ||||| || |||||||    
T  8935855 ttattaaataaaaattcaatggcagagattatacctgacggagctttgaagaaggaaagagcatagacagacagagaggtcaacacagatttgagaagaa 8935954  T
Q  335 ctaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagtttt 389  Q
    | || || |  || ||||| || |||||||| | ||| || |||| |||||||||    
T  8935955 ccaaacggcaaccaaaagagaggaaacgactattccaacctgacagtctagtttt 8936009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 241 - 393
Target Start/End: Original strand, 20675822 - 20675974
Alignment:
Q  241 aacaaagattcaatgagagaa-attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaag 339  Q
    |||||||||||||| |||| | ||||||||||  |||||||||||||| ||||||||||||||||| || || |||| |||||| || || ||||| |||    
T  20675822 aacaaagattcaat-agaggagattatacctgctggagctttgaagaatgaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaag 20675920  T
Q  340 cgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaata 393  Q
    ||||| || ||||| | ||| ||||| |  || ||||||| ||||| |||||||    
T  20675921 cgaccaccaaaagagaaaaaccgactattacaacccgacagtctagatttaata 20675974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 246 - 367
Target Start/End: Original strand, 38296497 - 38296618
Alignment:
Q  246 agattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgaccc 345  Q
    ||||||||||  | ||||||||||||||||||| |||||||||||||| ||||||||||| || || ||||  |||||||| ||||| ||||| || ||     
T  38296497 agattcaatggaaaaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaaaacagacttgagaaggactaaacggcca 38296596  T
Q  346 ccgaaagatagaaaacgacttt 367  Q
    || || || ||||| |||||||    
T  38296597 ccaaatgacagaaaccgacttt 38296618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 392
Target Start/End: Original strand, 42779030 - 42779188
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    |||| |||| ||||| ||||||  ||| ||||||||||| |||||||||||||||||||| ||||||||||  || || ||||  |||||||| |  | |    
T  42779030 tttaataaataaagaatcaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacagacagagaggtcaaaacagacttcaacaaa 42779129  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaat 392  Q
    || |  || || || ||||||||||||||||| | |||||| ||||| |||| ||||||    
T  42779130 accagacggccgccaaaagatagaaaacgactattccacccagacaacctagctttaat 42779188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 42952890 - 42952820
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||| |||||||||||||||  ||| ||||||||||| |||||||| ||||||||||| |||||||||||    
T  42952890 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacagg 42952820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 40688905 - 40688998
Alignment:
Q  278 ctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgcca 371  Q
    |||||||||||||||| ||||||||||  |||| ||||| ||||||||| | |||||  |||||||| || ||||| ||||| |||||||||||    
T  40688905 ctttgaagaaggaaagagcatagacagatagcgcagtcaagacagactttaaaagaatcaagcgacctccaaaagaaagaaaccgactttgcca 40688998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 393
Target Start/End: Original strand, 2365814 - 2365944
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaac 361  Q
    |||||||||||| ||| |||||| ||||| ||  |||||||||| |  ||||||| |||||||||||| | ||| || ||||| || ||||| |||||||    
T  2365814 attatacctgacagag-tttgaaaaaggagagaacatagacaggtaaggaagtcaagacagacttaaggataaccaatcgaccaccaaaagacagaaaac 2365912  T
Q  362 gactttgccaccccgacaatctagttttaata 393  Q
    |||| | ||| || |||||||||| |||||||    
T  2365913 gactcttccaaccagacaatctagatttaata 2365944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 365
Target Start/End: Complemental strand, 10562656 - 10562553
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaac 361  Q
    ||||||||||| |||||||||||||||||||| ||||||||||  || || ||||| |||||||| | |||||| | |||||| |  ||||||| ||||     
T  10562656 attatacctgatggagctttgaagaaggaaagcgcatagacagacagagaggtcagaacagactttaaaagaaccaggcgaccgctaaaagataaaaaat 10562557  T
Q  362 gact 365  Q
    ||||    
T  10562556 gact 10562553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 246 - 344
Target Start/End: Complemental strand, 19308935 - 19308837
Alignment:
Q  246 agattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacc 344  Q
    ||||||||||  ||| ||||||||||  |||||| |||| || ||||| || |||||||| || |||| ||||||||||||||||||||  ||||||||    
T  19308935 agattcaatggaagagattatacctgcgggagctctgaaaaaagaaagggcgtagacaggcagtgaagacaggacagacttaagaagaatcaagcgacc 19308837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 335
Target Start/End: Original strand, 17951503 - 17951564
Alignment:
Q  274 ggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    ||||||||||| |||||||||||||| |||| ||| || ||||||||||||||||| |||||    
T  17951503 ggagctttgaataaggaaagtgcataaacagaaagagatgtcaggacagacttaaggagaac 17951564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 335
Target Start/End: Original strand, 29133683 - 29133744
Alignment:
Q  274 ggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    |||||||||||||||||||| ||||||||||  || || |||| ||||||||||||||||||    
T  29133683 ggagctttgaagaaggaaagagcatagacagagagagaggtcaagacagacttaagaagaac 29133744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 384
Target Start/End: Complemental strand, 55464200 - 55464091
Alignment:
Q  275 gagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccc 374  Q
    ||||||||||||||||||| ||||||||| | || |||||||  |||||||||||||| |  || ||||| || ||||| | ||| ||||| | ||||||    
T  55464200 gagctttgaagaaggaaagagcatagacatgcagagaagtcaatacagacttaagaaggatcaaacgaccaccaaaagaaaaaaagcgactctcccaccc 55464101  T
Q  375 cgacaatcta 384  Q
     |||||||||    
T  55464100 agacaatcta 55464091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 11586536 - 11586456
Alignment:
Q  241 aacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggaca 321  Q
    |||||||||||||||  ||||||||||||| || |||||||| | |||||||| || || |||||||| | ||||||||||    
T  11586536 aacaaagattcaatggaagaaattataccttacagagctttgtaaaaggaaagagcgtacacaggaagtgtagtcaggaca 11586456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 326
Target Start/End: Complemental strand, 53486284 - 53486197
Alignment:
Q  239 taaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagactt 326  Q
    |||| ||||| ||||||  ||| ||||||| ||| |||||||||||||||||||   ||||||||||||| || ||||| ||||||||    
T  53486284 taaataaagaatcaatggaagagattatacttgatggagctttgaagaaggaaaacacatagacaggaagagaggtcagaacagactt 53486197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 304
Target Start/End: Original strand, 20396390 - 20396432
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacag 304  Q
    ||||||||||| |||||||||||||||||||| ||||||||||    
T  20396390 attatacctgatggagctttgaagaaggaaagcgcatagacag 20396432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 20675623 - 20675693
Alignment:
Q  56 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaa 126  Q
    ||||||||||| || |||||||| || | ||||| ||||||||||||||| || | |||||||||||||||    
T  20675623 accctataccacaaaccacctctgtccaccaacatccgccaacaccattttcctaacaaagctaaattaaa 20675693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 26694709 - 26694779
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||| || ||||||||||||  ||| ||||||||||  |||||||||||||| ||||| |||||||||||    
T  26694709 ttattcaataaagattcaatggaagagattatacctgttggagctttgaagaaagaaagggcatagacagg 26694779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 55299213 - 55299283
Alignment:
Q  56 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaa 126  Q
    |||| |||||| || ||||||||||| | ||||| ||||||||||||||| || | |||||||||||||||    
T  55299213 acccgataccacaaaccacctctatccaccaacatccgccaacaccattttcctaacaaagctaaattaaa 55299283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 335
Target Start/End: Original strand, 17955356 - 17955417
Alignment:
Q  274 ggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    ||||||||||| ||||||||| |||| |||| ||| || ||||||||||||||||| |||||    
T  17955356 ggagctttgaataaggaaagtacataaacagaaagagatgtcaggacagacttaaggagaac 17955417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 29328117 - 29328032
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgac 343  Q
    ||||||||||| ||  ||||| ||||||||||||||  |||||||||| || || |||| |||| |||| ||||||| ||||||||    
T  29328117 agaaattatacttgttggagccttgaagaaggaaagaccatagacaggtagagaggtcaagacaaactttagaagaattaagcgac 29328032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 334
Target Start/End: Original strand, 19837927 - 19838015
Alignment:
Q  246 agattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    ||||||||||  ||| ||||||||||  |||||| |||| || ||||| || |||||||| || |||| ||||||||||||||| ||||    
T  19837927 agattcaatggtagagattatacctgcgggagctctgaaaaaagaaagggcgtagacaggcagtgaagacaggacagacttaaggagaa 19838015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 38296284 - 38296320
Alignment:
Q  33 cctcaccatatctcgccatcaacaccctataccaaaa 69  Q
    |||||||||||||||||| ||||||||||||||||||    
T  38296284 cctcaccatatctcgccaccaacaccctataccaaaa 38296320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 323
Target Start/End: Complemental strand, 3129305 - 3129247
Alignment:
Q  265 atacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacaga 323  Q
    |||||||| |||| ||||||||| ||||| ||||||||||| || ||||||| ||||||    
T  3129305 atacctgatggagttttgaagaaagaaagggcatagacaggcagagaagtcaagacaga 3129247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 278 - 344
Target Start/End: Complemental strand, 12079230 - 12079164
Alignment:
Q  278 ctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacc 344  Q
    ||||||||||  |||| ||||||||||| ||| | | ||||||| |||| |||||||||||||||||    
T  12079230 ctttgaagaataaaagagcatagacagggagcaaggccaggacaaactttagaagaactaagcgacc 12079164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 3129528 - 3129479
Alignment:
Q  56 accctataccaaaacccacctctatctatcaacaaccgccaacaccattt 105  Q
    ||||||||||| || ||||||||||| | ||||| |||||||||||||||    
T  3129528 accctataccacaaaccacctctatccaccaacatccgccaacaccattt 3129479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 19162489 - 19162392
Alignment:
Q  274 ggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgcca 371  Q
    ||||| |||||||||||||| ||||||||||| ||||  |||| |||| |||| | |||||  |||||||| || || || ||||| | |||||||||    
T  19162489 ggagccttgaagaaggaaagagcatagacaggtagcgcggtcaagacatactttaaaagaatcaagcgacctccaaaggaaagaaacctactttgcca 19162392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 292
Target Start/End: Complemental strand, 29122775 - 29122722
Alignment:
Q  239 taaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaa 292  Q
    |||||||||| |||| || |||||| |||||||| |||||||||||||| ||||    
T  29122775 taaacaaagagtcaaggatagaaatgatacctgaaggagctttgaagaaagaaa 29122722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 32153567 - 32153632
Alignment:
Q  51 tcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaag 116  Q
    |||||||  ||||||| || || ||| |||||||||||| || ||||||||||||||||| |||||    
T  32153567 tcaacactttataccataagccccctttatctatcaacatcctccaacaccatttacccaacaaag 32153632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 338
Target Start/End: Original strand, 37871997 - 37872097
Alignment:
Q  238 ttaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaacta 337  Q
    ||||| |||||||||||   |||||| |||||||  ||||||||||||||||||||    ||||| ||||| || | || ||||||||| || |||||||    
T  37871997 ttaaataaagattcaatagaagaaatgatacctgcgggagctttgaagaaggaaagaaagtagaccggaagagatgacaagacagactttaggagaacta 37872096  T
Q  338 a 338  Q
    |    
T  37872097 a 37872097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 40434296 - 40434248
Alignment:
Q  18 acaacctccctgcctcctcaccatatctcgccatcaacaccctatacca 66  Q
    ||||||| ||| |||||||||| || ||||||| |||||||||||||||    
T  40434296 acaaccttcctccctcctcaccgtacctcgccaccaacaccctatacca 40434248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 41352594 - 41352546
Alignment:
Q  259 gaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaa 307  Q
    ||||| ||| ||||||| ||||||||||||| ||| |||||||||||||    
T  41352594 gaaatgatatctgacggggctttgaagaagggaagagcatagacaggaa 41352546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 55464412 - 55464360
Alignment:
Q  56 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttacc 108  Q
    ||||||||||| || |||||||||||||  ||||||| ||||||| |||||||    
T  55464412 accctataccacaaaccacctctatctactaacaacctccaacactatttacc 55464360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 148; Significance: 7e-78; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 19 - 493
Target Start/End: Original strand, 6823975 - 6824448
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    ||||||||||||||||||| |||||||||||  ||| ||||||||||| |||||  ||||||| | |||||  | |||||||||||| |  |  || |||    
T  6823975 caacctccctgcctcctcaacatatctcgccgccaaaaccctataccagaaccccgctctatccaccaacattctccaacaccatttgcttaataaggct 6824074  T
Q  119 aaattaaattcttgcaactacctcac-cctagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
    |||||||| || | ||||| |||||| || |  |||| |  |||||||||| |||||| |||  || |||| ||| ||||||||||||||||||||||||    
T  6824075 aaattaaactccttcaactgcctcactcccaacccttcatgctccttttttgaacaaatagaattctaagcaatcgaggaaattttcctgttatcctcac 6824174  T
Q  218 tacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcag 317  Q
    | |||||||       |||  |||| | | | |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||  |||||    
T  6824175 tccctccccaatttttttttgtaaaaataaaatcaatgagagaaataatacttgacggagctttgaagaaggaaagtgcatagacaggaagcg--gtcag 6824272  T
Q  318 gacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaa 417  Q
    |||||| |||||||||||||| || || |||||||||| ||| ||| ||||||||||||  | |||||  |||||| ||| ||||||||||||||||||     
T  6824273 gacagatttaagaagaactaaacggcctccgaaagataaaaagcgaatttgccaccccgttagtctagacttaatattagacaccacaggttcccaaaag 6824372  T
Q  418 gctaattttctaggatcaccgccaatagagagaccaagatacaagaacggagttttgcccactttacaatttaaaa 493  Q
     ||||| |    |||||||| ||||| || | ||||||||||| ||||||  ||||||||||||||||||||||||    
T  6824373 actaatctgtgtggatcacctccaattgacaaaccaagatacatgaacggtattttgcccactttacaatttaaaa 6824448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 158 - 493
Target Start/End: Complemental strand, 33583863 - 33583529
Alignment:
Q  158 actccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaatgag 257  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||             |||||| | |||||||  ||     
T  33583863 actccttttgtaaacaaacagagctccaagcaatccaggaaattttcctgttatcctcacaccctctaaaaaaaaaaaaattaaaaacagattcatgga- 33583765  T
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagataga 357  Q
    ||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||| |||| |||| ||| || || |||||| | ||||||    
T  33583764 agagattatacctgacggagctttgaaaaaggaaagagcatagacaggaagcgaggtcaggacaaacttgagaaaaacgaaccggcccccggatgataga 33583665  T
Q  358 aaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaagctaattttctaggatcaccgccaatagagagaccaagat 457  Q
    || ||||||||||||||||||||||||| ||||||||||| ||||||| |||| ||||| |||||  | | ||||||||| ||||| || |||| |||||    
T  33583664 aatcgactttgccaccccgacaatctagatttaatagtagacaccacatgttctcaaaacgctaacctccgaggatcacctccaatcgatagactaagat 33583565  T
Q  458 acaagaacggagttttgcccactttacaatttaaaa 493  Q
    ||||||||  | |||| ||||| ||||| |||||||    
T  33583564 acaagaacataattttacccaccttacagtttaaaa 33583529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 239 - 393
Target Start/End: Original strand, 13551367 - 13551521
Alignment:
Q  239 taaacaaagattcaatgagagaa-attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaacta 337  Q
    |||||||||||||||| |||| | ||||||||||| |||||||||||||||||||||||||||||||| |  || ||||||||||| || |||||||| |    
T  13551367 taaacaaagattcaat-agaggagattatacctgatggagctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaacca 13551465  T
Q  338 agcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaata 393  Q
    ||||||| || ||||||||||| ||||| | ||| || |||| ||||| |||||||    
T  13551466 agcgaccaccaaaagatagaaaccgactattccaacctgacagtctagatttaata 13551521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 169 - 373
Target Start/End: Original strand, 11197066 - 11197271
Alignment:
Q  169 aaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctcccc-nnnnnnntttattaaacaaagattcaatgagagaaattata 267  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||        | ||||||||| ||||||||||| ||| ||||||    
T  11197066 aaacaaacagagctccaagcaatctaggaaattttcctgttatcctcactccctccccaaaaaaaatgtattaaacatagattcaatgatagagattata 11197165  T
Q  268 cctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacgacttt 367  Q
    ||||||||||| |||||||| ||||| ||||| |||   | |   |||||||||||||| ||||| || || ||||| ||  | || |||||||| ||||    
T  11197166 cctgacggagccttgaagaatgaaagagcataaacaaataacacggtcaggacagacttcagaaggaccaaccgacctccatatgaaagaaaacggcttt 11197265  T
Q  368 gccacc 373  Q
    ||||||    
T  11197266 gccacc 11197271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 236 - 391
Target Start/End: Original strand, 15018459 - 15018614
Alignment:
Q  236 tattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    ||||||| ||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||  | ||||||| |||||  || |||| |||    
T  15018459 tattaaataaagattcaatggtagagattatacctgacggagctttgaagaaggaaagtgcatagacaggccgagaagtcaagacagctttgagaacaac 15018558  T
Q  336 taagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaa 391  Q
     ||||  || || ||||| || |||||||| | ||| |||||||||| || |||||    
T  15018559 caagcagccaccaaaagagaggaaacgactattccaacccgacaatcgagctttaa 15018614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 235 - 393
Target Start/End: Original strand, 12646331 - 12646489
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    ||||| |||||||||||||||  ||| |||||||||| |||||||||||| |||||||| |||||||||||||||| ||| ||||| || || |||||||    
T  12646331 ttatttaacaaagattcaatggaagagattatacctggcggagctttgaaaaaggaaagagcatagacaggaagcgcagttaggacggatttgagaagaa 12646430  T
Q  335 ctaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaata 393  Q
     || |||||| || || || || || ||||| ||||| |  |||||||||| |||||||    
T  12646431 ttaggcgaccaccaaaggagaggaaccgactatgccaacttgacaatctagatttaata 12646489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 26147019 - 26147099
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaa 338  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||| || || |||| ||||||||| |||||||||||    
T  26147019 agaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttagaagaactaa 26147099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 320
Target Start/End: Complemental strand, 33515552 - 33515467
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggac 320  Q
    ||||| |||||||||| ||||  ||| ||| ||||||||||||||||||| ||||||||||||||||||||||| | |||||||||    
T  33515552 ttatttaacaaagatttaatggaagagattgtacctgacggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggac 33515467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 241 - 365
Target Start/End: Original strand, 28253516 - 28253640
Alignment:
Q  241 aacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagc 340  Q
    |||| ||||||||||  ||| ||||||||||||| | ||||||| |||||||||||||||||| |||| | ||||||||| ||||| ||||| | || ||    
T  28253516 aacagagattcaatggaagagattatacctgacgaaactttgaaaaaggaaagtgcatagacatgaagagcagtcaggacggacttgagaaggattaggc 28253615  T
Q  341 gacccccgaaagatagaaaacgact 365  Q
    |||| || ||||| ||||| |||||    
T  28253616 gaccaccaaaagagagaaaccgact 28253640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 234 - 316
Target Start/End: Original strand, 14440524 - 14440606
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtca 316  Q
    |||||| ||||||||||||||   ||| |||||||||||||||||||| || |||||||||||||| |||||||||| |||||    
T  14440524 tttatttaacaaagattcaatagaagagattatacctgacggagctttaaaaaaggaaagtgcataaacaggaagcgcagtca 14440606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 323
Target Start/End: Original strand, 45422303 - 45422389
Alignment:
Q  237 attaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacaga 323  Q
    |||||| |||||||||| |  ||||||||||||||| |||||||||||||| ||||| ||||||||||| || ||||||| ||||||    
T  45422303 attaaataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 45422389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 365
Target Start/End: Complemental strand, 25380754 - 25380622
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    |||||| || |||||||||||   ||| ||||||||||| |||||||||||||| ||||||||||||| ||| ||  |||||| |||||| || ||||||    
T  25380754 tttattcaataaagattcaatagaagagattatacctgatggagctttgaagaaagaaagtgcatagagaggcagataagtcaagacagatttgagaaga 25380655  T
Q  334 actaagcgacc-cccgaaagatagaaaacgact 365  Q
    || ||||| || ||  ||||| |||||||||||    
T  25380654 accaagcggccgccaaaaagagagaaaacgact 25380622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 10289395 - 10289325
Alignment:
Q  265 atacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    |||| ||| |||||||||||||||||||| ||||||||||||||||| |||||||| ||||| || |||||    
T  10289395 atacttgagggagctttgaagaaggaaagagcatagacaggaagcgaggtcaggaccgacttcaggagaac 10289325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 355
Target Start/End: Complemental strand, 3153167 - 3153058
Alignment:
Q  246 agattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgaccc 345  Q
    ||||||||||  ||| ||||||||||  ||||||||||| || ||||| || |||||||| ||||||| ||||||||||||||| ||||  |||||| |     
T  3153167 agattcaatggaagagattatacctgcgggagctttgaaaaaagaaagggcgtagacaggcagcgaagacaggacagacttaaggagaatcaagcgatca 3153068  T
Q  346 ccgaaagata 355  Q
    ||| ||||||    
T  3153067 ccgtaagata 3153058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 235 - 335
Target Start/End: Complemental strand, 22724798 - 22724698
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    ||||||||||| |||||||||  ||| ||||||||| ||| |||||| ||||||||||| ||||||||||  || || |||| ||| || ||||||||||    
T  22724798 ttattaaacaatgattcaatggtagagattatacctaacgaagctttaaagaaggaaagagcatagacagacagagaggtcatgactgatttaagaagaa 22724699  T
Q  335 c 335  Q
    |    
T  22724698 c 22724698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 43311063 - 43311143
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaa 338  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||| || ||  | |  |||||||| |||||||||||    
T  43311063 agaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagagataaaaacagactttagaagaactaa 43311143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 10689344 - 10689422
Alignment:
Q  260 aaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaa 338  Q
    ||||||||| ||||||| | |||||||||||||| ||||||||||| || || |||| |||| |||| |||||||||||    
T  10689344 aaattatacatgacggatccttgaagaaggaaagagcatagacaggtagagaggtcaagacatactttagaagaactaa 10689422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 265 - 355
Target Start/End: Complemental strand, 20946918 - 20946828
Alignment:
Q  265 atacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagata 355  Q
    |||||||||||||||||||| || ||||| ||||| ||||| | ||| | ||||||||| || || | ||| |||||||||||||||||||    
T  20946918 atacctgacggagctttgaaaaaagaaagggcataaacaggcaacgacgacaggacagatttcagtaaaaccaagcgacccccgaaagata 20946828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 8065620 - 8065551
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacag 304  Q
    ||||| || ||||||||||||  ||| ||||||||||| |||||||||||||||||||  ||||||||||    
T  8065620 ttattcaataaagattcaatggaagagattatacctgatggagctttgaagaaggaaaaagcatagacag 8065551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 335
Target Start/End: Complemental strand, 12807471 - 12807410
Alignment:
Q  274 ggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    |||||||||||||||||||| ||||||| |||||||||||| |||||| |||| || |||||    
T  12807471 ggagctttgaagaaggaaagggcatagaaaggaagcgaagttaggacaaactttaggagaac 12807410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 392
Target Start/End: Complemental strand, 28399909 - 28399752
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    ||||| || ||||||||||||  ||| ||||||||||  |||||||||||||| ||||| ||||||||||| || || ||||| || || || || ||||    
T  28399909 ttattcaataaagattcaatggaagagattatacctgctggagctttgaagaaagaaagagcatagacaggcagagatgtcagaactgattttaggagaa 28399810  T
Q  335 ctaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaat 392  Q
      || || || || ||||| ||||| | ||| ||||| ||||||| ||||| ||||||    
T  28399809 tcaaacgtccaccaaaagagagaaacctactatgccaacccgacagtctagatttaat 28399752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 43722362 - 43722282
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaa 338  Q
    ||||||||||||||||||||| |||||||||||||| ||||| | |||||| || ||||  ||||| || || ||||||||    
T  43722362 agaaattatacctgacggagccttgaagaaggaaagagcataaataggaagagaggtcaatacagaatttaggagaactaa 43722282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 331
Target Start/End: Original strand, 2282605 - 2282659
Alignment:
Q  277 gctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaa 331  Q
    ||||||||||||||||| ||||| |||||||| || |||| ||||||||||||||    
T  2282605 gctttgaagaaggaaagggcatacacaggaagagaggtcatgacagacttaagaa 2282659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 317
Target Start/End: Complemental strand, 9668365 - 9668283
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcag 317  Q
    ||||| |||||||||||||||  ||| |||||| |||| |||||||| |||||||| || ||||||||||  | |||||||||    
T  9668365 ttattcaacaaagattcaatggaagagattatatctgatggagctttaaagaaggacagagcatagacagacaacgaagtcag 9668283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 11233848 - 11233778
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||| |||||||||||||||  ||| | ||||||||| |||||||| ||||||||||| ||||| |||||    
T  11233848 ttattcaacaaagattcaatggaagagactatacctgatggagctttaaagaaggaaagagcataaacagg 11233778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 26146779 - 26146865
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccattt 105  Q
    |||||||||  ||||||| ||||||||||||| ||||||||||||||| || | ||  || || | |||||| ||||||||||||||    
T  26146779 caacctcccatcctcctcgccatatctcgccaccaacaccctataccacaaactactcctctccaccaacaaacgccaacaccattt 26146865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 35488619 - 35488689
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||| || ||||||||||||  ||| ||||||||||| |||||||| ||||||||||  |||||||||||    
T  35488619 ttattcaataaagattcaatggaagagattatacctgaaggagctttaaagaaggaaaaagcatagacagg 35488689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 371
Target Start/End: Original strand, 13416506 - 13416603
Alignment:
Q  274 ggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgcca 371  Q
    ||||| |||||||||||||| ||||||||| | ||||  |||| || |||||| |||||||  |||||||| || || || ||||| |||||||||||    
T  13416506 ggagccttgaagaaggaaagagcatagacatgtagcgcggtcaagatagactttagaagaatcaagcgacctccaaatgaaagaaaccgactttgcca 13416603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 248 - 305
Target Start/End: Original strand, 34357602 - 34357659
Alignment:
Q  248 attcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||||||  |||||||||| || ||||||| |||||||||||||| |||||||||||    
T  34357602 attcaatggaagaaattatatctaacggagccttgaagaaggaaagagcatagacagg 34357659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 12646096 - 12646171
Alignment:
Q  30 cctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccattt 105  Q
    ||||| |||| || || |||| ||||||||||||||| || ||| |||||||||  ||||||| ||||||||||||    
T  12646096 cctccacaccttacctagccaccaacaccctataccacaatccatctctatctactaacaacctccaacaccattt 12646171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 20004753 - 20004812
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggaca 321  Q
    |||||||||||  |||||||||||||||| || | ||||||||| | |||||||||||||    
T  20004753 attatacctgatagagctttgaagaaggagagagtatagacaggtaacgaagtcaggaca 20004812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 43310823 - 43310870
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctatacca 66  Q
    |||||||||  ||||||| ||||||||||||| |||||||||||||||    
T  43310823 caacctcccatcctcctcgccatatctcgccaccaacaccctatacca 43310870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 7301237 - 7301299
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatc 81  Q
    ||||||| ||| ||||| ||| || ||| ||| ||||||||||||| ||||||||||||||||    
T  7301237 caacctctctgtctccttaccgtacctcaccaccaacaccctatactaaaacccacctctatc 7301299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 371
Target Start/End: Complemental strand, 44028545 - 44028436
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaac 361  Q
    ||||||| ||| ||||| |||||||||||||| ||||||||||  || |  |||| ||||||||| || |||| ||| ||  | ||||| || ||||| |    
T  44028545 attatacatgatggagccttgaagaaggaaagagcatagacagatagagcggtcaagacagactttaggagaattaaacggtcaccgaaggagagaaacc 44028446  T
Q  362 gactttgcca 371  Q
    ||||||||||    
T  44028445 gactttgcca 44028436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 355
Target Start/End: Original strand, 44940451 - 44940532
Alignment:
Q  274 ggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagata 355  Q
    |||||| |||| || ||||| || |||||||| || |||| ||||||||||||||| ||||  |||||||| ||| ||||||    
T  44940451 ggagctctgaaaaaagaaagggcgtagacaggcagtgaagacaggacagacttaaggagaatcaagcgaccaccgtaagata 44940532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 418
Target Start/End: Complemental strand, 2207142 - 2206998
Alignment:
Q  274 ggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccacc 373  Q
    ||||| |||||||||||||| ||||||||||| ||||  | || ||| ||||| | |||||  || ||||| || || || ||||| ||||||||||| |    
T  2207142 ggagccttgaagaaggaaagagcatagacaggtagcgcggacaagacggactttacaagaatcaaacgacctccaaaggaaagaaaccgactttgccaac 2207043  T
Q  374 ccgacaatctagttttaatagtaggcaccacaggttcccaaaaag 418  Q
      |||| ||||| |||||||    | |||||||| ||||||||||    
T  2207042 tggacagtctagatttaatacggtgaaccacaggctcccaaaaag 2206998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 18669549 - 18669477
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    |||||||||||  ||||||||||||| ||||| || ||||||||||| |||| || ||| || ||||| ||||    
T  18669549 attatacctgagagagctttgaagaaagaaagggcgtagacaggaagagaagacatgacggatttaaggagaa 18669477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 6e-60; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 23 - 461
Target Start/End: Original strand, 42259848 - 42260289
Alignment:
Q  23 ctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaat 122  Q
    ||||| ||| |||||| ||||||| |||  |||||| |||||||||||||||||||||| | ||||| ||| |||||||||||||| | ||| |||| ||    
T  42259848 ctcccagccacctcacgatatctctccacaaacaccttataccaaaacccacctctatccaccaacatccgtcaacaccatttacctaacaaggctatat 42259947  T
Q  123 taaattcttgcaactacctcaccct-agacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacc 221  Q
    |||| |    |||||  |||||||  ||||||  | |||||||   ||||||| ||||||||||||| |||||||||||||||| |||||||||||| ||    
T  42259948 taaacttcgccaactgtctcacccccagacctccatactccttacctaaacaagcagagctccaagcaatccaggaaattttccagttatcctcactccc 42260047  T
Q  222 tccccnnnnnnntttatt--aaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcagga 319  Q
    |||||       ||| ||  ||| |||| |||||||  | | |||||| |||| |||||||||||||||||||| || |||||||||||||| |||| ||    
T  42260048 tccccaatttttttttttttaaataaagtttcaatggaaaagattatatctgatggagctttgaagaaggaaagagcgtagacaggaagcgaggtcaaga 42260147  T
Q  320 cagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaagc 419  Q
    ||||||| |||||||  || || || || || |||||||| ||||| || |||   |||| ||||||||||||| ||| || || |||||||||||||||    
T  42260148 cagacttgagaagaatcaaacggcctccaaatgatagaaagcgactctgacactttgacagtctagttttaataatagacatcataggttcccaaaaagc 42260247  T
Q  420 taattttctaggatcaccgccaatagagagaccaagatacaa 461  Q
    |||  ||| ||||||||| ||||| ||| |||||||||||||    
T  42260248 taaccttcaaggatcaccaccaattgagcgaccaagatacaa 42260289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 234 - 416
Target Start/End: Original strand, 42514500 - 42514682
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||||||| ||||||    
T  42514500 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 42514599  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaa 416  Q
    |  || ||||| ||||||||||| || ||||||||||| || |||||||||| |||||||  |  ||||||||||||||||||    
T  42514600 atcaaacgaccaccgaaagataggaaccgactttgccaaccagacaatctagatttaatacgatccaccacaggttcccaaaa 42514682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 19 - 490
Target Start/End: Original strand, 380465 - 380937
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    |||||||||||||||||||||||| | |||   || |||||||||||| || ||| ||||||| | ||||| ||||||||||||||| || |  ||  |     
T  380465 caacctccctgcctcctcaccataccgcgcttccagcaccctataccagaaaccatctctatccaccaacatccgccaacaccatttgcctagtaagaca 380564  T
Q  119 aaattaaattcttgcaactacctcaccct-agacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
      |||||| ||   ||||| ||| ||||  | ||||  | |||||||   |||||| | |||||||||||| | |||||||||||||||||| ||||  |    
T  380565 ctattaaactccctcaactgcctgacccccaaacctccatactccttacataaacagatagagctccaagcaacccaggaaattttcctgttctccttgc 380664  T
Q  218 tacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcag 317  Q
    | |||||||        |||||||| | ||||||||||| |||||| |||||||| | |||||||||||||||||| ||||||||| | || || ||||     
T  380665 tccctccccaaaaaaaattattaaaaatagattcaatgatagaaatgatacctgatgaagctttgaagaaggaaagagcatagacatgcagagaggtcaa 380764  T
Q  318 gacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaa 417  Q
    |||| |||| |||||||| || || ||||  ||||| |||||||||||||||||||||||||||||||  ||||| |    || |||||| ||||||||     
T  380765 gacaaactttagaagaaccaaccggcccctaaaagagagaaaacgactttgccaccccgacaatctagacttaatggatttcaacacaggatcccaaaat 380864  T
Q  418 gctaattttctaggatcaccgccaatagagagaccaagatacaagaacggagttttgcccactttacaattta 490  Q
    |||||  | || | |||||| |||||||| || || ||||||| ||| |||| ||| ||||||||||||||||    
T  380865 gctaacctcctcgaatcacctccaatagaaaggcccagatacacgaaaggagctttacccactttacaattta 380937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 234 - 416
Target Start/End: Complemental strand, 30731674 - 30731492
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||| ||||| || |||    
T  30731674 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacggactttagtaga 30731575  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaa 416  Q
    |  || ||||| ||||||||||| || ||||||| ||| || |||||||||| |||||||  |  ||||||||||||||||||    
T  30731574 atcaaacgaccaccgaaagataggaaccgacttttccaaccagacaatctagatttaatacgatccaccacaggttcccaaaa 30731492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 234 - 393
Target Start/End: Complemental strand, 28535036 - 28534877
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||||||||||||| || | ||||||||| ||||||||||||    
T  28535036 tttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggacttaagaaga 28534937  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaata 393  Q
    |  || ||||| || ||||| || || ||||||||||| || ||||||||| ||||||||    
T  28534936 atcaaacgaccaccaaaagaaaggaaccgactttgccaacctgacaatctatttttaata 28534877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 234 - 416
Target Start/End: Original strand, 23239163 - 23239345
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||||||||||||| || | ||||||||| ||||| ||||||    
T  23239163 tttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaaga 23239262  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaa 416  Q
    |   | ||||| |||||||| || || ||||||||||| || |||||||||| |||| ||  |  ||| ||||||||||||||    
T  23239263 atcgaacgaccaccgaaagaaaggaaccgactttgccaaccagacaatctagatttagtacgattcacaacaggttcccaaaa 23239345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 235 - 393
Target Start/End: Original strand, 27796265 - 27796423
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    ||||| |||||||||||||||  ||| ||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||  | || |||||||    
T  27796265 ttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacgaatttgagaagaa 27796364  T
Q  335 ctaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaata 393  Q
     ||  ||||| || ||||| || || ||||| ||||| || ||||||||||||||||||    
T  27796365 ttagacgaccaccaaaagaaaggaaccgactatgccaaccagacaatctagttttaata 27796423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 338
Target Start/End: Complemental strand, 22174550 - 22174252
Alignment:
Q  39 catatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattcttgcaacta 138  Q
    |||||||||||| |||||| |||||||| |||||||||||||| | |||||||| |||||||||| |||| | ||||||||  ||||| || | |||||     
T  22174550 catatctcgccaccaacactctataccataacccacctctatccaccaacaacctccaacaccatctacctaacaaagctatgttaaactccttcaactg 22174451  T
Q  139 cctca-ccctagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnnttta 237  Q
    ||||| |||||| ||   |   || ||||| |||||||||| ||||||||| || || ||||||||| ||||||||||||| |||| ||       || |    
T  22174450 cctcacccctagtccaccatgttcttttttgaaacaaacagcgctccaagcaatacaagaaattttcatgttatcctcactccctcgccaatttttttaa 22174351  T
Q  238 ttaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaacta 337  Q
      ||| | ||||||||||  ||| ||||||||||| ||| | |||||||| ||||  |||||||||||||  ||||||| |||||| || ||||| ||||    
T  22174350 aaaaaaagagattcaatggaagagattatacctgatggaaccttgaagaaagaaa--gcatagacaggaattgaagtcatgacagatttgagaaggacta 22174253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 234 - 334
Target Start/End: Complemental strand, 35983151 - 35983051
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  | | |||||||||||| |||||||||| |||||||||||||||||||| || | ||||||||||||||||||||||    
T  35983151 tttattaaacaaagattcaatggaaaagattatacctgacagagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacagacttaagaaga 35983052  T
Q  334 a 334  Q
    |    
T  35983051 a 35983051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 476777 - 476875
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagc 117  Q
    |||||||||||||||||||||||||||||| | || ||||||||||||||| ||| ||||||||| |||||  ||||||||||||||||| | ||||||    
T  476777 caacctccctgcctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctatctaccaacattcgccaacaccatttacctaacaaagc 476875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 235 - 393
Target Start/End: Complemental strand, 22094608 - 22094450
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    |||||||| ||||||||||||  ||| |||||||||||||||||||||||||||||||| ||||||||||| |  ||||||| |||||  || |||||||    
T  22094608 ttattaaataaagattcaatggcagagattatacctgacggagctttgaagaaggaaagagcatagacaggcaaagaagtcaagacagctttgagaagaa 22094509  T
Q  335 ctaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaata 393  Q
    | ||  | || || ||||| || |||||||| | ||| ||||||| ||||| |||||||    
T  22094508 ccaaatggccaccaaaagagaggaaacgactattccaacccgacagtctagctttaata 22094450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 8299542 - 8299469
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaa 307  Q
    |||||||||||||||||||||   ||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  8299542 tttattaaacaaagattcaatagaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggaa 8299469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 258 - 344
Target Start/End: Original strand, 21084685 - 21084771
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacc 344  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||| || || |||| ||||||||| ||||| ||||| |||||    
T  21084685 agaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttagaaggactaaccgacc 21084771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 234 - 344
Target Start/End: Complemental strand, 25856799 - 25856689
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||| |||   ||| ||||||||||||||||||||||| |||||||||||||||||||||| || ||| | |||||| || || |||    
T  25856799 tttattaaacaaagatttaatataagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggaatcgcagttaagacagatttgagcaga 25856700  T
Q  334 actaagcgacc 344  Q
    |  ||||||||    
T  25856699 atcaagcgacc 25856689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 235 - 393
Target Start/End: Complemental strand, 30509382 - 30509224
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    |||||||||||||| ||||||  ||| ||||||||||  |||||||| ||||||||||| ||||||||||| || |||||||  || |  || ||||| |    
T  30509382 ttattaaacaaagaatcaatggaagagattatacctgttggagctttaaagaaggaaagagcatagacaggcagagaagtcaacacggctttcagaagga 30509283  T
Q  335 ctaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaata 393  Q
      |||||||| || ||||| ||||| || || | ||||||||||||||||| |||||||    
T  30509282 tcaagcgaccaccaaaagagagaaaccggctattccaccccgacaatctagatttaata 30509224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 235 - 393
Target Start/End: Complemental strand, 30549725 - 30549567
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    |||||||||||||| ||||||  ||| ||||||||||  |||||||| ||||||||||| ||||||||||| || |||||||  || |  || ||||| |    
T  30549725 ttattaaacaaagaatcaatggaagagattatacctgttggagctttaaagaaggaaagagcatagacaggcagagaagtcaacacggctttcagaagga 30549626  T
Q  335 ctaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaata 393  Q
      |||||||| || ||||| ||||| || || | ||||||||||||||||| |||||||    
T  30549625 tcaagcgaccaccaaaagagagaaaccggctattccaccccgacaatctagatttaata 30549567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 237 - 385
Target Start/End: Complemental strand, 29572227 - 29572079
Alignment:
Q  237 attaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaact 336  Q
    ||||| ||||||||||| |  ||| ||||||| |||| ||||||||||||||||||||||||||||||| || || ||||| ||||| ||||| | |       
T  29572227 attaagcaaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagatttaagcaaagtc 29572128  T
Q  337 aagcgacccccgaaagatagaaaacgactttgccaccccgacaatctag 385  Q
    || || ||||||||||| |  |||||||||| ||| || ||||||||||    
T  29572127 aaacggcccccgaaagaaaagaaacgacttttccaaccagacaatctag 29572079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 237 - 385
Target Start/End: Complemental strand, 29573604 - 29573456
Alignment:
Q  237 attaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaact 336  Q
    ||||| ||||||||||| |  ||| ||||||| |||| ||||||||||||||||||||||||||||||| || || ||||| ||||| ||||| | |       
T  29573604 attaagcaaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagatttaagcaaagtc 29573505  T
Q  337 aagcgacccccgaaagatagaaaacgactttgccaccccgacaatctag 385  Q
    || || ||||||||||| |  |||||||||| ||| || ||||||||||    
T  29573504 aaacggcccccgaaagaaaagaaacgacttttccaaccagacaatctag 29573456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 237 - 385
Target Start/End: Complemental strand, 29574981 - 29574833
Alignment:
Q  237 attaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaact 336  Q
    ||||| ||||||||||| |  ||| ||||||| |||| ||||||||||||||||||||||||||||||| || || ||||| ||||| ||||| | |       
T  29574981 attaagcaaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagatttaagcaaagtc 29574882  T
Q  337 aagcgacccccgaaagatagaaaacgactttgccaccccgacaatctag 385  Q
    || || ||||||||||| |  |||||||||| ||| || ||||||||||    
T  29574881 aaacggcccccgaaagaaaagaaacgacttttccaaccagacaatctag 29574833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 237 - 385
Target Start/End: Complemental strand, 29576358 - 29576210
Alignment:
Q  237 attaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaact 336  Q
    ||||| ||||||||||| |  ||| ||||||| |||| ||||||||||||||||||||||||||||||| || || ||||| ||||| ||||| | |       
T  29576358 attaagcaaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagatttaagcaaagtc 29576259  T
Q  337 aagcgacccccgaaagatagaaaacgactttgccaccccgacaatctag 385  Q
    || || ||||||||||| |  |||||||||| ||| || ||||||||||    
T  29576258 aaacggcccccgaaagaaaagaaacgacttttccaaccagacaatctag 29576210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 237 - 385
Target Start/End: Complemental strand, 29577735 - 29577587
Alignment:
Q  237 attaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaact 336  Q
    ||||| ||||||||||| |  ||| ||||||| |||| ||||||||||||||||||||||||||||||| || || ||||| ||||| ||||| | |       
T  29577735 attaagcaaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagatttaagcaaagtc 29577636  T
Q  337 aagcgacccccgaaagatagaaaacgactttgccaccccgacaatctag 385  Q
    || || ||||||||||| |  |||||||||| ||| || ||||||||||    
T  29577635 aaacggcccccgaaagaaaagaaacgacttttccaaccagacaatctag 29577587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 237 - 385
Target Start/End: Complemental strand, 29579112 - 29578964
Alignment:
Q  237 attaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaact 336  Q
    ||||| ||||||||||| |  ||| ||||||| |||| ||||||||||||||||||||||||||||||| || || ||||| ||||| ||||| | |       
T  29579112 attaagcaaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagatttaagcaaagtc 29579013  T
Q  337 aagcgacccccgaaagatagaaaacgactttgccaccccgacaatctag 385  Q
    || || ||||||||||| |  |||||||||| ||| || ||||||||||    
T  29579012 aaacggcccccgaaagaaaagaaacgacttttccaaccagacaatctag 29578964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 33170438 - 33170525
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggaca 321  Q
    |||||| |||||||||||||||  | | ||||||||||||||||||||||| |||||||| ||||||||||| || | ||||||||||    
T  33170438 tttatttaacaaagattcaatggaatagattatacctgacggagctttgaaaaaggaaagagcatagacaggtagtgcagtcaggaca 33170525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 262 - 335
Target Start/End: Original strand, 6050048 - 6050121
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    ||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||| |||||||| | ||||||    
T  6050048 attatacctgatggagctttgaagaaggaaagcgcatagacaggcagcgaggtcagaacagactttaaaagaac 6050121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 234 - 303
Target Start/End: Original strand, 10780981 - 10781050
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagaca 303  Q
    |||||| ||||||||||||||   ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  10780981 tttatttaacaaagattcaatagaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 10781050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 235 - 316
Target Start/End: Complemental strand, 35122047 - 35121966
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtca 316  Q
    ||||| |||||||||||||||  ||| ||||||||||| |||||||| ||||||||||| ||||||||||| || |||||||    
T  35122047 ttattcaacaaagattcaatggaagagattatacctgaaggagctttaaagaaggaaagagcatagacaggcagagaagtca 35121966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 332
Target Start/End: Complemental strand, 33385299 - 33385235
Alignment:
Q  268 cctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaag 332  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||| || |||||    
T  33385299 cctgacggagctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacagatttgagaag 33385235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 41590893 - 41590973
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaa 338  Q
    ||||||||||||||||||||| |||||||||||||| | ||||||||| || || |||| ||||||||| || ||||||||    
T  41590893 agaaattatacctgacggagccttgaagaaggaaagagtatagacaggtagagaggtcaagacagactttaggagaactaa 41590973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 235 - 521
Target Start/End: Original strand, 19506779 - 19507065
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    ||||| |||||||||||||||  ||| ||||||||||| |||||||| ||||||||||| ||||||||| | |  |||||||| || |  || |  ||||    
T  19506779 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacaagcaaagaagtcagaactgctttcaagagaa 19506878  T
Q  335 ctaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaagctaattttctaggatc 434  Q
    |||||||||| ||||| |||| ||| || || | ||| || |||| ||||| ||||||  ||  ||| ||||| | |||||| |  ||    |  ||||     
T  19506879 ctaagcgaccaccgaacgataaaaaccggctattccaacctgacagtctagatttaattttattcacaacagggttccaaaacgaaaaacgacgcggatt 19506978  T
Q  435 accgccaatagagagaccaagatacaagaacggagttttgcccactttacaatttaaaactgatgcagcctctaacaaccacgactc 521  Q
    ||| |||||||  |||||||| |||| ||| ||| | ||||||||||||||||| || ||||| || ||||| | |||||| |||||    
T  19506979 acccccaataggaagaccaaggtacatgaaaggaatcttgcccactttacaattcaatactgaagccgcctcaaccaaccaagactc 19507065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 392
Target Start/End: Complemental strand, 20208052 - 20207922
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaac 361  Q
    ||||||| ||| |||||||||||||||||||| ||||||||||| || || || ||||||||||| | |||||| |  || || ||  |||||| |||||    
T  20208052 attatacatgatggagctttgaagaaggaaagcgcatagacaggcagagaggttaggacagactttaaaagaaccagacggccgccataagataaaaaac 20207953  T
Q  362 gactttgccaccccgacaatctagttttaat 392  Q
    |||| | ||| || ||||| |||||||||||    
T  20207952 gactattccaaccagacaacctagttttaat 20207922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 22172393 - 22172311
Alignment:
Q  340 cgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaagctaa 422  Q
    ||||||| |||||||| ||| | ||||||||||||||||||||||| |||||||| || || ||| ||||||||||| |||||    
T  22172393 cgacccctgaaagataaaaagcaactttgccaccccgacaatctagatttaatagcagacatcacgggttcccaaaatgctaa 22172311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 56 - 301
Target Start/End: Original strand, 34481549 - 34481795
Alignment:
Q  56 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattcttgcaactacctca-ccctagacctt 154  Q
    ||||||||||| ||||||||||| |||| ||||| ||||||||||||||| || | ||||||||  ||||| || | ||  | ||||| ||| | |||      
T  34481549 accctataccacaacccacctctgtctaccaacatccgccaacaccatttccctaacaaagctatgttaaactccttcactttcctcacccccaaaccac 34481648  T
Q  155 taaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaat 254  Q
     | |||||||||||||||||||||    ||||   | ||| ||||||||||||||||||||||| || |||         ||| ||||||||||||||||    
T  34481649 catactccttttttaaacaaacagtttgccaacttaaccaagaaattttcctgttatcctcactcccccccaaaaaaaaattaataaacaaagattcaat 34481748  T
Q  255 -gagagaaattatacctgacggagctttgaagaaggaaagtgcataga 301  Q
     ||| || ||||||||||| | ||||||||||||||| ||||| ||||    
T  34481749 agag-gagattatacctgatgaagctttgaagaaggagagtgcgtaga 34481795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 371
Target Start/End: Original strand, 36256595 - 36256692
Alignment:
Q  274 ggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgcca 371  Q
    ||||| |||||||||||||| ||||||||||| ||||  |||| ||||||||| | |||||  |||||||| || ||||| ||||| |||||||||||    
T  36256595 ggagccttgaagaaggaaagagcatagacaggtagcgcggtcaagacagactttaaaagaatcaagcgacctccaaaagaaagaaaccgactttgcca 36256692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 4297645 - 4297565
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaa 338  Q
    ||||||||||||||||||||  |||||||||||||| ||||||||||| || || |||| || |||||| || ||||||||    
T  4297645 agaaattatacctgacggagtcttgaagaaggaaagagcatagacaggtagagaggtcaagatagactttaggagaactaa 4297565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 26261650 - 26261591
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggaca 321  Q
    ||||||||||| |||||||||||||||||||| ||||||||||  || ||||||||||||    
T  26261650 attatacctgaaggagctttgaagaaggaaagagcatagacagatagagaagtcaggaca 26261591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 42039267 - 42039221
Alignment:
Q  33 cctcaccatatctcgccatcaacaccctataccaaaacccacctcta 79  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||    
T  42039267 cctcaccatatttcgccaccaacaccctataccaaaacccacctcta 42039221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 328
Target Start/End: Original strand, 22437998 - 22438092
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaa 328  Q
    ||||||||||| |||||||||   ||| ||||||||||| |||||| ||||||||||||  ||||||||| | || ||||  |||| ||||||||    
T  22437998 tttattaaacatagattcaatataagagattatacctgagggagctatgaagaaggaaaaagcatagacatgtagagaagataggatagacttaa 22438092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 35983300 - 35983250
Alignment:
Q  86 aacaaccgccaacaccatttacccatcaaagctaaattaaattcttgcaac 136  Q
    ||||||||||||||||||||| ||| ||||||||||||||| |||| ||||    
T  35983300 aacaaccgccaacaccatttatccaacaaagctaaattaaactctttcaac 35983250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 38358248 - 38358318
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||| || ||||||||||||  ||| ||||||||||  |||||||||||||| ||||| |||||||||||    
T  38358248 ttattcaataaagattcaatggaagagattatacctgttggagctttgaagaaagaaagagcatagacagg 38358318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 246 - 359
Target Start/End: Original strand, 588299 - 588412
Alignment:
Q  246 agattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgaccc 345  Q
    ||||||||||  ||| ||||||| | | ||||||||||||||  |||| ||||||||||| || || |||| |||||| || ||||| || ||||| ||     
T  588299 agattcaatggaagagattatacataatggagctttgaagaaacaaagagcatagacaggcagagaggtcaagacagattttagaagtaccaagcggcca 588398  T
Q  346 ccgaaagatagaaa 359  Q
    |||||||| |||||    
T  588399 ccgaaagagagaaa 588412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 10486238 - 10486173
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacaga 323  Q
    ||||| ||||||||| |||||||||||||| ||||  ||||||||||| || ||||||| ||||||    
T  10486238 agaaagtatacctgatggagctttgaagaaagaaatggcatagacaggcagagaagtcaagacaga 10486173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 478946 - 479002
Alignment:
Q  237 attaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaag 293  Q
    |||||| |||||||||| |  ||||||||||||||| || |||||||||||||||||    
T  478946 attaaataaagattcaagggtagaaattatacctgagggggctttgaagaaggaaag 479002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 15829939 - 15829883
Alignment:
Q  237 attaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaag 293  Q
    |||||| |||||||||| |  ||||||||||||||| || |||||||||||||||||    
T  15829939 attaaataaagattcaagggtagaaattatacctgagggggctttgaagaaggaaag 15829883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 31642142 - 31642182
Alignment:
Q  86 aacaaccgccaacaccatttacccatcaaagctaaattaaa 126  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  31642142 aacaaccgccaacaccatttatccaacaaagctaaattaaa 31642182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 4297885 - 4297838
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctatacca 66  Q
    |||||||||  ||||||||||||| ||||||| |||||||||||||||    
T  4297885 caacctcccatcctcctcaccatacctcgccaccaacaccctatacca 4297838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 15862253 - 15862194
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctct 78  Q
    ||||| ||| ||||| |||||||| || || |||||||||||||||||||||||| ||||    
T  15862253 caaccgcccagcctcttcaccatacctagcaatcaacaccctataccaaaacccatctct 15862194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 334
Target Start/End: Original strand, 19838390 - 19838445
Alignment:
Q  279 tttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    |||||||||||||||  |||||||||| |  ||||||||||||||||| |||||||    
T  19838390 tttgaagaaggaaagaacatagacaggcaaagaagtcaggacagacttgagaagaa 19838445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 316
Target Start/End: Original strand, 26659800 - 26659851
Alignment:
Q  265 atacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtca 316  Q
    |||||||| |||||||||||||||||||| || || || |||||||||||||    
T  26659800 atacctgagggagctttgaagaaggaaagagcgtaaacgggaagcgaagtca 26659851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 316
Target Start/End: Original strand, 26931392 - 26931443
Alignment:
Q  265 atacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtca 316  Q
    |||||||| |||||||||||||||||||| || || || |||||||||||||    
T  26931392 atacctgagggagctttgaagaaggaaagagcgtaaacgggaagcgaagtca 26931443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 41590660 - 41590707
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctatacca 66  Q
    |||||||||  ||||||||||||| ||||||| |||||||||||||||    
T  41590660 caacctcccatcctcctcaccatacctcgccaccaacaccctatacca 41590707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 1821309 - 1821407
Alignment:
Q  295 gcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaata 393  Q
    ||||||||||  || | ||||| |||| ||||||||||||  |||||||| ||||| || ||||| |   ||||||| || ||||||||||||||||||    
T  1821309 gcatagacagacagagcagtcatgacaaacttaagaagaatcaagcgaccaccgaaggaaagaaaccatttttgccaaccagacaatctagttttaata 1821407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 262 - 300
Target Start/End: Original strand, 6885721 - 6885759
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatag 300  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  6885721 attatacctgatggagctttgaagaaggaaagagcatag 6885759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 30509581 - 30509496
Alignment:
Q  61 ataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattcttgcaactacctcaccc 146  Q
    |||||| || ||| |||||||||  ||||||| |||||||||||| || | |||||||| ||||||||| | ||||| ||| ||||    
T  30509581 ataccacaagccatctctatctactaacaacctccaacaccatttccctagcaaagctacattaaattccttcaacttcctaaccc 30509496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 30549921 - 30549836
Alignment:
Q  61 ataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattcttgcaactacctcaccc 146  Q
    |||||| || ||| |||||||||  ||||||| |||||||||||| || | |||||||| ||||||||| | ||||| ||| ||||    
T  30549921 ataccacaagccatctctatctactaacaacctccaacaccatttccctagcaaagctacattaaattccttcaacttcctaaccc 30549836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 305
Target Start/End: Complemental strand, 15862042 - 15861974
Alignment:
Q  237 attaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    |||||| ||||||||||||  ||| || |||||||||| | |||||||||| ||||| ||| |||||||    
T  15862042 attaaataaagattcaatggaagagataatacctgacgaatctttgaagaaagaaagagcacagacagg 15861974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 28535184 - 28535145
Alignment:
Q  86 aacaaccgccaacaccatttacccatcaaagctaaattaaa 126  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  28535184 aacaaccgccaacaccatttacccaac-aagctaaattaaa 28535145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 5e-54; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 19 - 422
Target Start/End: Original strand, 25193652 - 25194056
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    ||||||||| |||||||||||||| | | ||| |||||||| |||||| |||||| ||||||| | ||||| || ||| |||||||| || |  |||||     
T  25193652 caacctcccagcctcctcaccataccgcaccaccaacacccgataccagaacccatctctatccaccaacatcctccagcaccattttcctaataaagca 25193751  T
Q  119 aaattaaattcttgcaactacctcac-cctagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
     ||||||||||    |||| |||||| || |  |||  ||||||||||| ||||||||| || |||||||  |||||||||||||||||||||||||||     
T  25193752 caattaaattcccttaactgcctcacacccaatcctccaaactccttttgtaaacaaactgatctccaagaaatccaggaaattttcctgttatcctcat 25193851  T
Q  218 tacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcag 317  Q
    | |||||||        |||| ||| | ||||||||||| ||| |||||||||||| ||||||||||||||||||| |||||||||| |||||| ||||     
T  25193852 tccctccccaaattttgttataaaaaatagattcaatgatagagattatacctgacagagctttgaagaaggaaagagcatagacagtaagcgaggtcaa 25193951  T
Q  318 gacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaa 417  Q
    |||| |||| | ||| |  || ||||| ||| |||||||||| ||||| ||||||||||||||||| |  ||||| ||| ||| |||||| ||||| ||     
T  25193952 gacaaactttaaaaggatcaaccgaccaccgtaagatagaaagcgactctgccaccccgacaatctggacttaattgtatgcaacacaggatcccagaat 25194051  T
Q  418 gctaa 422  Q
    |||||    
T  25194052 gctaa 25194056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 234 - 416
Target Start/End: Original strand, 7925166 - 7925348
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||||||| ||||||    
T  7925166 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 7925265  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaa 416  Q
    |  || ||||| ||||||||||| || ||||||  ||| || |||||||||| |||||||  |  ||||||||||||||||||    
T  7925266 atcaaacgaccaccgaaagataggaaccgacttgnccaaccagacaatctagatttaatacgatccaccacaggttcccaaaa 7925348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 19 - 461
Target Start/End: Complemental strand, 29721486 - 29721044
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    ||||||||| | |||||||||||||||||||| ||| ||||||||||| |||||||||  ||| |  |||| || |||||||||||| || | ||| ||     
T  29721486 caacctcccaggctcctcaccatatctcgccaccaaaaccctataccacaacccaccttgatcaactaacatcctccaacaccatttgcctaacaacgca 29721387  T
Q  119 aaattaaattcttgcaactacctcaccctagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcact 218  Q
    | |||||| || | ||| | |||||| |   |||   | |||||||     |||||| | |  |||||||||||||||||||||||||||||||||||||    
T  29721386 agattaaactccttcaatttcctcacacccaacccccatactccttacgagaacaaatataattccaagcgatccaggaaattttcctgttatcctcact 29721287  T
Q  219 acctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcagg 318  Q
     |||||||           ||||||| ||||||||||  ||| ||||||||||||||||||||||| |||||||| ||||||||||| |  || | ||||    
T  29721286 ccctccccaaaaaaacaatttaaacatagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacaggcaaagaggacagg 29721187  T
Q  319 acagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaag 418  Q
    |||||||| || | ||  || || |||||||| || || |||||||| ||||||||  ||||||||| |||||| ||| |||  ||||| |||||||| |    
T  29721186 acagacttgagcaaaatcaatcggcccccgaatgagaggaaacgactctgccaccctaacaatctagatttaatggtatgcaaaacagggtcccaaaatg 29721087  T
Q  419 ctaattttctaggatcaccgccaatagagagaccaagatacaa 461  Q
    ||| ||| | ||||||||| ||||| || || |||||||||||    
T  29721086 ctagtttccgaggatcaccaccaatcgataggccaagatacaa 29721044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 56 - 392
Target Start/End: Original strand, 6245683 - 6246022
Alignment:
Q  56 accctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattcttgcaactacctcaccctagacctt- 154  Q
    ||||||||||| | |||||||||||| | ||||| |||||||||| ||||||| | ||||||   |||||| || ||||||| ||||||||   ||| |     
T  6245683 accctataccagagcccacctctatccaccaacatccgccaacacaatttacctaacaaagcgctattaaactcctgcaacttcctcacccccaaccctc 6245782  T
Q  155 --taaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattca 252  Q
      ||  ||||||   |||||||||| |||||||||  ||||||||||||||||| ||||| ||||| |||||||       ||||||||| | | |||||    
T  6245783 catacgctccttacataaacaaacaaagctccaagaaatccaggaaattttcctattatcatcactccctccccaaatttttttattaaatataaattca 6245882  T
Q  253 atgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaag 352  Q
    |||| ||  |||||||||||||||||||||||||||||||| ||||||||| | | ||  |||||||||||||||||||  || |   |||| ||  |||    
T  6245883 atgacagggattatacctgacggagctttgaagaaggaaagagcatagacaagtaacgcggtcaggacagacttaagaatgaccaccagaccaccataag 6245982  T
Q  353 atagaaaacgactttgccaccccgacaatctagttttaat 392  Q
    | || ||||||||| |||||||| ||| ||||||||||||    
T  6245983 agagcaaacgacttcgccaccccaacagtctagttttaat 6246022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 234 - 392
Target Start/End: Original strand, 9923381 - 9923539
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||| ||||||||| || | ||||| ||| ||||||||||||    
T  9923381 tttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgtatagacaggtagagcagtcaagacggacttaagaaga 9923480  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaat 392  Q
    || || ||||| || ||||| || || ||||||||||| || ||||||||| |||||||    
T  9923481 accaaacgaccaccaaaagaaaggaatcgactttgccaaccagacaatctatttttaat 9923539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 168 - 335
Target Start/End: Original strand, 15539771 - 15539938
Alignment:
Q  168 taaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaatgagagaaattata 267  Q
    |||||| | |||||||||||| | ||||||||||||| |||| |||||||| |||||||       ||||||||| | ||||||||||| |||||| |||    
T  15539771 taaacagatagagctccaagcaacccaggaaattttcatgttctcctcactccctccccaaaattttttattaaaaatagattcaatgatagaaatgata 15539870  T
Q  268 cctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    |||||||||||||||||||||||||| ||||| ||||| || || |||| ||||||||| ||||||||    
T  15539871 cctgacggagctttgaagaaggaaagagcataaacaggcagagaggtcaagacagactttagaagaac 15539938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 19 - 293
Target Start/End: Original strand, 36025085 - 36025360
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    ||||| ||| |||||||||||||||||||||| ||| || |||||||| ||||| |||||||| | ||||| ||||||||||||||  || |  |||||     
T  36025085 caaccgcccagcctcctcaccatatctcgccaccaaaactctataccataaccctcctctatccaccaacatccgccaacaccattatcctaataaagca 36025184  T
Q  119 aaattaaattcttgcaactacctcaccctagacctttaaactccttttt-taaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
    | |||||||||   ||||| ||||||||   | |      || ||||   ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36025185 atattaaattcactcaactgcctcacccccaatcccccctcttctttacgtaaacaaacagtgctccaagcgatccaggaaattttcctgttatcctcac 36025284  T
Q  218 tacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaag 293  Q
    | |||||||       ||||||||| | ||| | ||||  ||| ||||||||||||||||||||||||||||||||    
T  36025285 tccctccccaaatttttttattaaaaatagagttaatggaagagattatacctgacggagctttgaagaaggaaag 36025360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 234 - 416
Target Start/End: Complemental strand, 41664728 - 41664546
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||||| ||||||||||| ||||||||  | | ||||||||| ||||| || |||    
T  41664728 tttattaaacaaagattcaatggaatagattatacctgacggagctttgaaaaaggaaagtgcgtagacaggtggagcagtcaggacggactttagtaga 41664629  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaa 416  Q
    |  || ||||| ||||||||||| || ||||||||||| || |||||||||| |||||||  |  ||| ||||||||||||||    
T  41664628 atcaaacgaccaccgaaagataggaaccgactttgccaaccagacaatctagatttaatacgattcacaacaggttcccaaaa 41664546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 234 - 393
Target Start/End: Original strand, 8300583 - 8300742
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| |||||||||| |||||||||||| |||||||||||||||||||| || | ||||||||| ||||| ||||||    
T  8300583 tttattaaacaaagattcaatggaagagattatacctgccggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaaga 8300682  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaata 393  Q
    |  || || || ||||| || ||||| ||||||||||| || | |||||||| |||||||    
T  8300683 atcaaacggccaccgaaggaaagaaaccgactttgccaaccagccaatctagatttaata 8300742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 234 - 393
Target Start/End: Complemental strand, 13878847 - 13878688
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    |||||| |||||||||||||||  ||| ||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||  | || ||||||    
T  13878847 tttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacgaatttgagaaga 13878748  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaata 393  Q
    | ||  ||||| || ||||| || || ||||| ||||| || ||||||| ||||||||||    
T  13878747 attagacgaccaccaaaagaaaggaaccgactatgccaaccagacaatcgagttttaata 13878688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 235 - 393
Target Start/End: Original strand, 32267335 - 32267493
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    |||||||||||||||||||||  ||| ||||||||||||  ||||||||| |||||||||||||||||||| || | ||||| ||| |||||  ||||||    
T  32267335 ttattaaacaaagattcaatggaagagattatacctgacaaagctttgaaaaaggaaagtgcatagacaggtagagcagtcatgacggacttttgaagaa 32267434  T
Q  335 ctaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaata 393  Q
      || ||||| |||||||| || || ||||||||||| || |||||||||| |||||||    
T  32267435 tcaaacgaccaccgaaagaaaggaaccgactttgccaaccagacaatctagatttaata 32267493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 58 - 323
Target Start/End: Original strand, 7452955 - 7453221
Alignment:
Q  58 cctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagctaaattaaattcttgcaactacctcaccct-agaccttta 156  Q
    ||||||||| || |||||||| || | ||||| |||||||||||| ||||| | ||||||   ||||||||| | |||||  |||||||  | ||||  |    
T  7452955 cctataccacaaaccacctctgtccaccaacatccgccaacaccacttacctaacaaagcactattaaattcattcaactgtctcacccccaaacctcca 7453054  T
Q  157 aactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaatga 256  Q
     ||||||||||| |||||||||   ||||| | |||||||||||||| || | ||||||||| || ||||        |||||||| |||||||||| |     
T  7453055 tactccttttttgaacaaacagttttccaacctatccaggaaatttttctatgatcctcactgcccccccaaaaaaaattattaaataaagattcaaggg 7453154  T
Q  257 gagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacaga 323  Q
     ||| ||||||||||| |||||||||||||| ||||||||||||||||| || ||||||| ||||||    
T  7453155 aagagattatacctgatggagctttgaagaaagaaagtgcatagacaggtagagaagtcaagacaga 7453221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 171 - 365
Target Start/End: Complemental strand, 4987488 - 4987294
Alignment:
Q  171 acaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacct 270  Q
    |||||||||| ||||| | ||||| || |||||||| | |||||||||||| ||||        |||||||| |||||||||| |  |||||||||||||    
T  4987488 acaaacagagttccaacctatccaagacattttcctatgatcctcactaccaccccaaaaaaaattattaaataaagattcaagggtagaaattatacct 4987389  T
Q  271 gacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacgact 365  Q
    ||||||||||||||||| ||||| ||||||||||| || || ||||  ||||| || |||||||| || || || || ||||| || ||||||||    
T  4987388 gacggagctttgaagaaagaaagagcatagacaggtagagaggtcaacacagatttgagaagaaccaaacggccaccaaaagaaaggaaacgact 4987294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 332
Target Start/End: Original strand, 17700260 - 17700358
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaag 332  Q
    |||||| ||||||||||||||   ||| |||||| |||||||||||||||| ||||||||||||||||||||||||| ||||| |||||| || |||||    
T  17700260 tttatttaacaaagattcaatagaagagattatatctgacggagctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacagatttgagaag 17700358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 20825079 - 20825167
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttg-aagaaggaaagtgcatagacaggaagcgaagtcaggaca 321  Q
    |||||||||||||||||||||   ||| ||||||||||||||||||||| || ||||||||||||||||||||||||| ||||| ||||    
T  20825079 tttattaaacaaagattcaatagaagagattatacctgacggagctttgaaaaaaggaaagtgcatagacaggaagcgcagtcaagaca 20825167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 36157935 - 36158005
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    |||||||||||||||||||||  ||| ||||||||||| |||||||||||||||||||| |||||||||||    
T  36157935 ttattaaacaaagattcaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacagg 36158005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 19 - 226
Target Start/End: Original strand, 12341131 - 12341339
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    ||||| ||| |||||||||||||| ||||||| ||  |||||| |||| ||||| |||||||| |  |||| || ||||||||| || || | ||||||     
T  12341131 caaccgcccagcctcctcaccatacctcgccaccagtaccctaaaccacaaccctcctctatccactaacatcctccaacaccactttcctaacaaagcc 12341230  T
Q  119 aaattaaattcttgcaactacctcaccct-agacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
    | ||||||||| | |||||  |||||||  | |||   |  |||||||  |||||| || || |||||||| ||||||||||||||||||||||||||||    
T  12341231 atattaaattccttcaactgtctcacccccaaacccccattctcctttcgtaaacataccgaactccaagcaatccaggaaattttcctgttatcctcac 12341330  T
Q  218 tacctcccc 226  Q
    | |||||||    
T  12341331 tccctcccc 12341339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 36493185 - 36493265
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaa 338  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||| || || |||| ||||||||| || ||||||||    
T  36493185 agaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttaggagaactaa 36493265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 392
Target Start/End: Complemental strand, 26774579 - 26774449
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaac 361  Q
    ||||||| ||||||||||||||||||||| || ||||||| ||| | ||||||||||||||||||||  ||||  || |||||  | ||||| |||||||    
T  26774579 attatacatgacggagctttgaagaaggagagagcatagataggtaacgaagtcaggacagacttaatgagaatcaaacgaccaacaaaagacagaaaac 26774480  T
Q  362 gactttgccaccccgacaatctagttttaat 392  Q
    |||| | ||| || || ||||||| ||||||    
T  26774479 gactcttccaaccagataatctagatttaat 26774449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 235 - 392
Target Start/End: Original strand, 23942868 - 23943025
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    ||||| || ||||||||||||  ||| ||||||| ||| |||||||||||||||||||| ||||||||||| |  |||||||| || || || ||||| |    
T  23942868 ttattcaataaagattcaatggaagagattatacatgatggagctttgaagaaggaaagagcatagacaggcaaagaagtcagaactgatttgagaagga 23942967  T
Q  335 ctaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaat 392  Q
      ||||| || |||||||| ||||| |  || | ||| ||||||||||||| ||||||    
T  23942968 tcaagcggccaccgaaagagagaaatctgctattccaacccgacaatctagatttaat 23943025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 235 - 392
Target Start/End: Complemental strand, 43612544 - 43612387
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    ||||| || ||||||||||||  ||| ||||||||||| |||||||| ||||| ||||| ||||||||| |||| |||||||| || |  |||||||| |    
T  43612544 ttattcaataaagattcaatggaagagattatacctgatggagctttcaagaatgaaagggcatagacatgaagagaagtcagaactgctttaagaagga 43612445  T
Q  335 ctaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaat 392  Q
      || || || |||||||||||||| |  || | ||| ||||||||||||| ||||||    
T  43612444 tcaaacggccaccgaaagatagaaacctgctattccaacccgacaatctagatttaat 43612387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 37165556 - 37165431
Alignment:
Q  159 ctccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaatgaga 258  Q
    |||||||  ||| ||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||         | |||||| | ||||||||||  |    
T  37165556 ctcctttcgtaagcaaaccgagctccaagctatccaggagattttcctgttatcctcactccctcccaaaaaaaaataattaaaaatagattcaatggaa 37165457  T
Q  259 gaaattatacctgacggagctttgaa 284  Q
    || |||||||||||||||||||||||    
T  37165456 gagattatacctgacggagctttgaa 37165431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 24794501 - 24794571
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||| |||||||||||||||  ||| ||||||||||| |||||||| ||||||||||| |||||||||||    
T  24794501 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacagg 24794571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 5585751 - 5585880
Alignment:
Q  264 tatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacga 363  Q
    ||||| ||| ||||| ||||||||||| || |||||||||||||| | ||| ||||| ||||| |||||||| |||||||| ||||  ||  |||| |      
T  5585751 tatacatgatggagccttgaagaaggacagagcatagacaggaagtgcagttaggacggacttcagaagaaccaagcgaccaccgatggagggaaaccag 5585850  T
Q  364 ctttgccaccccgacaatctagttttaata 393  Q
    ||||||||  | ||||||||||||||||||    
T  5585851 ctttgccaaacagacaatctagttttaata 5585880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 335
Target Start/End: Original strand, 12332652 - 12332729
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    ||||||||||||||| ||||| ||||||||||| || ||||||||||| || || |||| ||||||||| ||||||||    
T  12332652 agaaattatacctgatggagccttgaagaaggagagagcatagacaggtagagaggtcaagacagactttagaagaac 12332729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 365
Target Start/End: Complemental strand, 16375456 - 16375332
Alignment:
Q  241 aacaaagattcaatgagagaa-attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaag 339  Q
    |||||||||||||| |||| | ||||||||||  |||| ||||||||||||||||| ||||||||| || || |||| |||||| || || ||||| |||    
T  16375456 aacaaagattcaat-agaggagattatacctgttggaggtttgaagaaggaaagtgtatagacaggcagagaggtcaagacagatttgagtagaaccaag 16375358  T
Q  340 cgacccccgaaagatagaaaacgact 365  Q
    ||||| || ||||| ||||| |||||    
T  16375357 cgaccaccaaaagagagaaaccgact 16375332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 235 - 317
Target Start/End: Original strand, 6901718 - 6901800
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcag 317  Q
    ||||||||  |||||||||||  ||| ||||||||| | |||||||||||||||||||| ||||||||| | || ||||||||    
T  6901718 ttattaaatgaagattcaatggaagagattatacctaatggagctttgaagaaggaaagggcatagacatgcagagaagtcag 6901800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 11393690 - 11393620
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||| |||||||||||||||  ||| ||||||||||| |||||||| ||||| ||||| |||||||||||    
T  11393690 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaatgaaagagcatagacagg 11393620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 12332412 - 12332461
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaa 68  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||||||    
T  12332412 caacctcccatcctcctcaccatatctcgccaccaacaccctataccaaa 12332461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 15439681 - 15439770
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacc 108  Q
    ||||||||||||||||||||||||   ||||  ||||||||||||||| || ||| ||||||  | ||||| | ||||||||||||||||    
T  15439681 caacctccctgcctcctcaccatactgcgcccccaacaccctataccataaaccatctctattcaccaacatctgccaacaccatttacc 15439770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 15530985 - 15531074
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacc 108  Q
    ||||||||||||||||||||||||   ||||  ||||||||||||||| || ||| ||||||  | ||||| | ||||||||||||||||    
T  15530985 caacctccctgcctcctcaccatactgcgcccccaacaccctataccataaaccatctctattcaccaacatctgccaacaccatttacc 15531074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 335
Target Start/End: Complemental strand, 45255172 - 45255099
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaac 335  Q
    ||||||||||| |||||||||||||| ||||| ||||||||||  ||||| ||||| |||||||| | ||||||    
T  45255172 attatacctgatggagctttgaagaatgaaagcgcatagacagacagcgaggtcagaacagactttaaaagaac 45255099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 310
Target Start/End: Complemental strand, 42176917 - 42176841
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcg 310  Q
    |||||| |||||||||| ||||  ||  |||||||||||   ||||||||| |||||||||||||||||||||||||    
T  42176917 tttatttaacaaagatttaatggaagggattatacctgaaaaagctttgaaaaaggaaagtgcatagacaggaagcg 42176841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 326
Target Start/End: Original strand, 17659626 - 17659713
Alignment:
Q  239 taaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagactt 326  Q
    |||| ||||| ||||||  ||| ||||||| ||| |||||||| ||||||||||| ||||||||||| |  || ||||||||||||||    
T  17659626 taaataaagaatcaatggaagagattatacttgatggagcttttaagaaggaaagcgcatagacaggcaaagaggtcaggacagactt 17659713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 332
Target Start/End: Original strand, 10530468 - 10530538
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaag 332  Q
    ||||||||||| ||||||||||| |||||||||||||| |||| ||| | ||| ||||| ||||| |||||    
T  10530468 attatacctgaaggagctttgaaaaaggaaagtgcataaacagaaagagcagttaggacggactttagaag 10530538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 36492945 - 36493031
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccattt 105  Q
    |||||||||  ||||||||||||| ||||||| ||||||||||||||| || | ||  || || | |||||| ||||||||||||||    
T  36492945 caacctcccatcctcctcaccatacctcgccaccaacaccctataccataaactactcctctcaaccaacaaacgccaacaccattt 36493031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 266 - 331
Target Start/End: Original strand, 18187957 - 18188022
Alignment:
Q  266 tacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaa 331  Q
    ||||||||||||||||||||| |||||| ||||||||||  ||  ||||||||| | |||||||||    
T  18187957 tacctgacggagctttgaagatggaaagagcatagacagacagaaaagtcaggataaacttaagaa 18188022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 8445596 - 8445652
Alignment:
Q  237 attaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaag 293  Q
    |||||| | ||||||||||  |||||| |||||||| ||||||||||||||||||||    
T  8445596 attaaatatagattcaatggaagaaatgatacctgaaggagctttgaagaaggaaag 8445652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 9923232 - 9923272
Alignment:
Q  86 aacaaccgccaacaccatttacccatcaaagctaaattaaa 126  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  9923232 aacaaccgccaacaccatttatccaacaaagctaaattaaa 9923272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 359
Target Start/End: Complemental strand, 43611550 - 43611426
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    ||||| || ||||||| ||||  ||| |||||||||||  || ||||||||||  |||  |||||||||||||| |||||||| || |  |||||||| |    
T  43611550 ttattcaataaagatttaatggaagagattatacctgatagaactttgaagaataaaaaggcatagacaggaagagaagtcagaactgctttaagaagga 43611451  T
Q  335 ctaagcgacccccgaaagatagaaa 359  Q
      ||||| || ||||||||||||||    
T  43611450 tcaagcggccaccgaaagatagaaa 43611426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 303
Target Start/End: Original strand, 12135013 - 12135072
Alignment:
Q  244 aaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagaca 303  Q
    ||||||||||||  ||| |||||||| || | |||||| |||||||||||||||||||||    
T  12135013 aaagattcaatggaagagattatacccgatgaagctttaaagaaggaaagtgcatagaca 12135072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 298
Target Start/End: Complemental strand, 43249163 - 43249100
Alignment:
Q  235 ttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcat 298  Q
    ||||| |||||||||||||||| ||| ||||||||||| ||| |||| |||||| |||| ||||    
T  43249163 ttattcaacaaagattcaatgaaagagattatacctgatggaactttaaagaagaaaagagcat 43249100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 18187710 - 18187808
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagc 117  Q
    ||||| |||| |||||||||||||||   | | || | |||||||||| || |||||||||||||  ||||| | ||||||||||||||| | ||||||    
T  18187710 caaccgccctacctcctcaccatatcaatcaaccagctccctataccacaaaccacctctatctactaacaatctccaacaccatttacctaacaaagc 18187808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 303
Target Start/End: Complemental strand, 4992056 - 4991987
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagaca 303  Q
    ||||||||| | ||||||| ||  ||| |||||| ||||| |||||||||||||||||||  ||||||||    
T  4992056 tttattaaaaatagattcagtggaagagattatatctgacagagctttgaagaaggaaagatcatagaca 4991987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 28992551 - 28992510
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagaca 303  Q
    ||||||||||||||  |||||||||||||||| |||||||||    
T  28992551 attatacctgacgggactttgaagaaggaaagagcatagaca 28992510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 119
Target Start/End: Original strand, 32267185 - 32267218
Alignment:
Q  86 aacaaccgccaacaccatttacccatcaaagcta 119  Q
    ||||||||||||||||||||||||| ||||||||    
T  32267185 aacaaccgccaacaccatttacccaacaaagcta 32267218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 14490512 - 14490568
Alignment:
Q  237 attaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaag 293  Q
    |||||| |||||||||| |  ||||||| ||||||| || |||||||||||||||||    
T  14490512 attaaataaagattcaagggtagaaattgtacctgagggggctttgaagaaggaaag 14490568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 246 - 334
Target Start/End: Complemental strand, 41691108 - 41691020
Alignment:
Q  246 agattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaa 334  Q
    ||||||||||  ||| ||||||||||  |||||| |||| || ||||| |  |||||||| || |||| ||||||||||||||| ||||    
T  41691108 agattcaatggaagagattatacctgcgggagctctgaaaaaagaaagggtgtagacaggcagtgaagacaggacagacttaaggagaa 41691020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 234 - 416
Target Start/End: Complemental strand, 105203 - 105021
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||||||| ||||||    
T  105203 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 105104  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaa 416  Q
    |  || ||||| ||||||||||| || ||||||||||| || |||||||||| |||||||  |  ||||||||||||||||||    
T  105103 atcaaacgaccaccgaaagataggaaccgactttgccaaccagacaatctagatttaatacgatccaccacaggttcccaaaa 105021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 97; Significance: 2e-47; HSPs: 2)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 163 - 396
Target Start/End: Original strand, 6800 - 7033
Alignment:
Q  163 ttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaatgagagaaa 262  Q
    ||||||||||||| ||||||||||   |||||||||||||||||||||  |||||  ||||||          ||||||| | |||||||||||||||||    
T  6800 ttttttaaacaaatagagctccaataaatccaggaaattttcctgttagactcacaccctcccaaaaaaaaagtattaaaaatagattcaatgagagaaa 6899  T
Q  263 ttatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacg 362  Q
    | |||||||||||||||||||| |||||||| ||||||||||||||||| |||| |||| | || ||||||| ||| || |||||||| ||||  || ||    
T  6900 tgatacctgacggagctttgaaaaaggaaagagcatagacaggaagcgaggtcaagacatatttgagaagaattaaacggcccccgaaggataagaagcg 6999  T
Q  363 actttgccaccccgacaatctagttttaatagta 396  Q
    |||||||||||||| |||||||||||||||||||    
T  7000 actttgccaccccgccaatctagttttaatagta 7033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 6652 - 6732
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaaca 99  Q
    ||||||||||||||||||||||||||||||||  || ||||||||||| || || ||||  |||| ||||| || ||||||    
T  6652 caacctccctgcctcctcaccatatctcgccactaaaaccctataccacaaaccgcctcgctctaccaacatcctccaaca 6732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 19 - 458
Target Start/End: Complemental strand, 63875 - 63436
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    ||||||||||||||||||| |||||||||||| |||||| |||||||||||   | || | || ||||||| ||||||||||||||| || | |||||||    
T  63875 caacctccctgcctcctcatcatatctcgccaccaacactctataccaaaaattatctttgtccatcaacatccgccaacaccatttccctagcaaagct 63776  T
Q  119 aaattaaattcttgcaactacctcaccctagacctttaaac-tccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
    |||||||| ||   ||||| ||| ||||   ||| |  | | |||||   |||||||| |||||| ||||  | ||||||||||||||||||||||||||    
T  63775 aaattaaactccctcaactgcctaacccccaaccctccaccctccttcagtaaacaaatagagcttcaagtaaaccaggaaattttcctgttatcctcac 63676  T
Q  218 tacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcag 317  Q
    | |||||||        || | ||| | ||||||||||  ||| ||||||||||| | ||| |||||||||||||| ||||| ||||||||| | ||||     
T  63675 tccctccccaaaaaaaatt-taaaaaatagattcaatggaagagattatacctgaagaagccttgaagaaggaaagagcataaacaggaagcaaggtcaa 63577  T
Q  318 gacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaatagtaggcaccacaggttcccaaaaa 417  Q
    |||||| || ||||| || || |  ||||| |||||||| || ||||| ||||||| ||||| ||||||||||||| ||  || ||| ||||||||||||    
T  63576 gacagattttagaaggaccaaccagcccccaaaagataggaagcgactctgccaccacgacattctagttttaatattattcatcacgggttcccaaaaa 63477  T
Q  418 gctaattttctaggatcaccgccaatagagagaccaagata 458  Q
      |||  ||  ||||||||| ||||| || |||||||||||    
T  63476 tttaacctttgaggatcaccaccaatcgaaagaccaagata 63436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 19 - 273
Target Start/End: Complemental strand, 34185 - 33930
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccatttacccatcaaagct 118  Q
    ||||||||||| |||||||||||||||||| | || ||||||||||||||| ||| |||| |||| |||||  |||||||||| |||||| | ||||||     
T  34185 caacctccctgtctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctctctaccaacattcgccaacaccttttacctaacaaagca 34086  T
Q  119 aaattaaattcttgcaactacctcac-cctagacctttaaactccttttttaaacaaacagagctccaagcgatccaggaaattttcctgttatcctcac 217  Q
      |||||| ||   || ||  ||||| || |  |||  | ||||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  34085 ctattaaactccctcagctgtctcactcccaaccctccatactccttttgtaaacaaacagagttccaagcgacctaggaaattttcctgttatcctcac 33986  T
Q  218 tacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgac 273  Q
    | |||||||       ||||||||| | ||||||||||| ||| ||||||||||||    
T  33985 tccctccccaaaaaaatttattaaaaatagattcaatgacagagattatacctgac 33930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 234 - 393
Target Start/End: Original strand, 4032 - 4191
Alignment:
Q  234 tttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaaga 333  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||||||||||||| || | ||||||||| ||||| ||||||    
T  4032 tttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaaga 4131  T
Q  334 actaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagttttaata 393  Q
    |  || ||||| ||||| || || || | ||||||| | || ||||| |||| |||||||    
T  4132 atcaaacgaccaccgaaggaaaggaaccaactttgcgaaccagacaacctagatttaata 4191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 190 - 393
Target Start/End: Original strand, 280 - 483
Alignment:
Q  190 atccaggaaattttcctgttatcctcactacctccccnnnnnnntttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaagg 289  Q
    ||||| |||||||| || || ||||||||||| ||||       |||||| ||||||||||||||   ||| ||||||| ||||||||||||||| ||||    
T  280 atccaagaaatttttcttttttcctcactacccccccaaaaaaatttatttaacaaagattcaattgaagagattatacttgacggagctttgaaaaagg 379  T
Q  290 aaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaacgactttgccaccccgacaatctagtttt 389  Q
    |||| |||||||||||||||| ||| ||||| || || |||||||  | |||||| || || || || || ||||| ||||| || || ||||||| |||    
T  380 aaagagcatagacaggaagcgcagttaggacggatttgagaagaatcaggcgaccaccaaaggagaggaaccgactatgccaaccagaaaatctagattt 479  T
Q  390 aata 393  Q
    ||||    
T  480 aata 483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 28578 - 28658
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaa 338  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||| || || |||| ||||||||| |||||||||||    
T  28578 agaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttagaagaactaa 28658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 28338 - 28424
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacaccattt 105  Q
    |||||||||  ||||||| |||||||| |||| ||||||||||||||| || | ||  || || | |||||| ||||||||||||||    
T  28338 caacctcccatcctcctcgccatatcttgccaccaacaccctataccacaaactactcctctccaccaacaaacgccaacaccattt 28424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 323
Target Start/End: Original strand, 8387 - 8473
Alignment:
Q  237 attaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacaga 323  Q
    |||||| |||||||||| |  ||||||||||||||| |||||||||||||| ||||| ||||||||||| || ||||||| ||||||    
T  8387 attaaataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 8473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 392
Target Start/End: Original strand, 8340 - 8470
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaac 361  Q
    ||||||||||| |||||||||||||||||||| ||||||||||| || || |||||||||||||| | |||||| |  |  || ||  |||||| |||||    
T  8340 attatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcaggacagactttaaaagaaccagacagccgccataagataaaaaac 8439  T
Q  362 gactttgccaccccgacaatctagttttaat 392  Q
    |||| | ||| || ||||| |||||||||||    
T  8440 gactattccaaccagacaacctagttttaat 8470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 262 - 392
Target Start/End: Original strand, 13274 - 13404
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaac 361  Q
    ||||||||||| |||||||||||||||||||| ||||||||||| || || || |||||| |||| | |||||| |  |  || ||  |||||| |||||    
T  13274 attatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtaaggacaaactttaaaagaaccagacagccgccataagataaaaaac 13373  T
Q  362 gactttgccaccccgacaatctagttttaat 392  Q
    |||| | ||| || ||||| |||||||||||    
T  13374 gactattccaaccagacaacctagttttaat 13404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 67644 - 67725
Alignment:
Q  19 caacctccctgcctcctcaccatatctcgccatcaacaccctataccaaaacccacctctatctatcaacaaccgccaacac 100  Q
    |||||||||||||||||||||||| || |  ||||||||||||||||||||||| ||||| || || ||||||| |||||||    
T  67644 caacctccctgcctcctcaccatacctagaaatcaacaccctataccaaaaccctcctctgtcaattaacaacctccaacac 67725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 393
Target Start/End: Original strand, 182923 - 183054
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaagcgacccccgaaagatagaaaac 361  Q
    ||||||||| | |||||||||||||||||||||||||||||||| || || ||||| || ||||| |  ||||| | | | || || ||||||| |||||    
T  182923 attatacctaatggagctttgaagaaggaaagtgcatagacaggcagagaggtcagaaccgactttaacagaaccaggtggccgccaaaagataaaaaac 183022  T
Q  362 gactttgccaccccgacaatctagttttaata 393  Q
    |||| | ||| || ||||| |||| |||||||    
T  183023 gactgttccaaccagacaacctagctttaata 183054  T

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Target: scaffold0131 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 3884 - 3819
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacaga 323  Q
    ||||| ||||||||| |||||||||||||| ||||| ||||||||||| || ||||||| ||||||    
T  3884 agaaagtatacctgatggagctttgaagaaagaaagggcatagacaggcagagaagtcaagacaga 3819  T

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Target: scaffold0061 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 55469 - 55549
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaa 338  Q
    ||||||||||||| | | ||| |||||||||||||| ||||||||||| || || |||| || |||||| |||||||||||    
T  55469 agaaattatacctaatgaagccttgaagaaggaaagagcatagacaggtagagaggtcaagatagactttagaagaactaa 55549  T

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Target: scaffold0061; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 55237 - 55273
Alignment:
Q  30 cctcctcaccatatctcgccatcaacaccctatacca 66  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  55237 cctcctcgccatatctcgccaccaacaccctatacca 55273  T

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Target: scaffold0017 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 143164 - 143084
Alignment:
Q  258 agaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaactaa 338  Q
    ||||||||||||| | | ||| |||||||||||||| ||||||||||| || || |||| || |||||| |||||||||||    
T  143164 agaaattatacctaatgaagccttgaagaaggaaagagcatagacaggtagagaggtcaagatagactttagaagaactaa 143084  T

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Target: scaffold0017; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 143397 - 143361
Alignment:
Q  30 cctcctcaccatatctcgccatcaacaccctatacca 66  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  143397 cctcctcgccatatctcgccaccaacaccctatacca 143361  T

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Target: scaffold0112 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 244 - 305
Target Start/End: Complemental strand, 15011 - 14950
Alignment:
Q  244 aaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtgcatagacagg 305  Q
    ||||||||||||  ||| ||||||||||  ||| |||||||||||||||| |||||||||||    
T  15011 aaagattcaatggaagagattatacctggtggatctttgaagaaggaaagagcatagacagg 14950  T

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Target: scaffold1809 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 301
Target Start/End: Complemental strand, 1132 - 1093
Alignment:
Q  262 attatacctgacggagctttgaagaaggaaagtgcataga 301  Q
    ||||||||||| ||||| ||||||||||||||||||||||    
T  1132 attatacctgatggagccttgaagaaggaaagtgcataga 1093  T

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Target: scaffold0094 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 323
Target Start/End: Original strand, 26111 - 26169
Alignment:
Q  265 atacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacaga 323  Q
    |||||||||||||| |||||||| ||||| ||||| ||||| ||||| | |||||||||    
T  26111 atacctgacggagccttgaagaaagaaagggcataaacaggcagcgatgacaggacaga 26169  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 48993 - 48923
Alignment:
Q  259 gaaattatacctgacggagctttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaag 329  Q
    |||||||||||||  || ||||||||||||||||  ||||| ||| |||| || ||||||||| |||||||    
T  48993 gaaattatacctgctggcgctttgaagaaggaaaaggcatacacaagaagagaggtcaggacaaacttaag 48923  T

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