View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19484_low_1 (Length: 597)

Name: NF19484_low_1
Description: NF19484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19484_low_1
NF19484_low_1
[»] chr3 (8 HSPs)
chr3 (9-597)||(7038370-7038958)
chr3 (179-357)||(39795240-39795418)
chr3 (188-357)||(32490848-32491017)
chr3 (215-290)||(831794-831869)
chr3 (252-357)||(20524861-20524966)
chr3 (9-49)||(7973631-7973671)
chr3 (9-49)||(10499070-10499110)
chr3 (9-49)||(51903839-51903879)
[»] chr4 (8 HSPs)
chr4 (226-373)||(36625521-36625668)
chr4 (213-356)||(33451293-33451436)
chr4 (183-357)||(19181414-19181588)
chr4 (250-357)||(44126011-44126118)
chr4 (183-361)||(45413767-45413945)
chr4 (243-359)||(26635260-26635376)
chr4 (252-359)||(2183304-2183411)
chr4 (183-301)||(42964503-42964621)
[»] chr2 (4 HSPs)
chr2 (187-452)||(6452408-6452667)
chr2 (188-350)||(40054471-40054633)
chr2 (178-345)||(6457533-6457700)
chr2 (252-346)||(7670386-7670480)
[»] chr7 (4 HSPs)
chr7 (214-355)||(39594606-39594747)
chr7 (188-359)||(41482419-41482590)
chr7 (271-361)||(24429718-24429808)
chr7 (214-346)||(23318950-23319082)
[»] chr5 (6 HSPs)
chr5 (490-597)||(39466273-39466383)
chr5 (189-357)||(34731215-34731383)
chr5 (189-290)||(16290786-16290887)
chr5 (215-289)||(7010701-7010775)
chr5 (9-45)||(9187494-9187530)
chr5 (383-452)||(38270193-38270259)
[»] chr8 (7 HSPs)
chr8 (178-285)||(12595848-12595955)
chr8 (188-357)||(22573080-22573249)
chr8 (188-361)||(31734261-31734434)
chr8 (271-357)||(556807-556895)
chr8 (273-357)||(9028635-9028719)
chr8 (215-282)||(3346410-3346477)
chr8 (9-49)||(11099842-11099882)
[»] chr1 (12 HSPs)
chr1 (214-361)||(9383224-9383371)
chr1 (183-361)||(26793697-26793875)
chr1 (263-357)||(4076347-4076441)
chr1 (263-356)||(19806758-19806851)
chr1 (188-317)||(12855276-12855405)
chr1 (178-219)||(44107845-44107886)
chr1 (252-300)||(20018619-20018667)
chr1 (221-309)||(28883928-28884016)
chr1 (271-361)||(6768290-6768380)
chr1 (216-313)||(30209719-30209816)
chr1 (263-295)||(7904167-7904199)
chr1 (263-295)||(8002742-8002774)
[»] chr6 (4 HSPs)
chr6 (189-286)||(12771941-12772038)
chr6 (263-357)||(8547436-8547530)
chr6 (263-357)||(8573789-8573883)
chr6 (9-49)||(12633084-12633124)


Alignment Details
Target: chr3 (Bit Score: 556; Significance: 0; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 556; E-Value: 0
Query Start/End: Original strand, 9 - 597
Target Start/End: Original strand, 7038370 - 7038958
Alignment:
Q  9 gaagaagctaaattagtccactcaaattaacatcggagagatgagaagatctctcttgatcaaaacctccgcatctgagagccccaatgatacgcctttt 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7038370 gaagaagctaaattagtccactcaaattaacatcggagagatgagaagatctctcttgatcaaaacctccgcatctgagagccccaatgatacgcctttt 7038469  T
Q  109 attttcagtctattcaaatcttccttaacttctttaactttgcctcctgtattgttttgacatatgtcattaaaggtctgtttgatgcgcatgatagaga 208  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7038470 attttcggtctattcaaatcttccttaacttctttaactttgcctcctgtattgttttgacatatgtcattaaaggtctgtttgatgcgcatgatagaga 7038569  T
Q  209 gacctgatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaaacctattaccaatcctatcgtattca 308  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7038570 gacctgatatgataaaattatcttatcctatttaaatccattatttggtacactaataggatatgataaattaaacctattactaatcctatcgtattca 7038669  T
Q  309 tcttttgtaattctaatccttactttttgttgggttagcaacatgatagcataggcttatcatcagcatgcatgttattttctttaccctccttcgattt 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7038670 tcttttgtaattctaatccttactttttgttgggttagcaacatgatagcataggcttatcatcagcatgcatgttattttctttaccctccttcgattt 7038769  T
Q  409 ccaatccagactcttccttcatctctcgtgtaaccttcttcttccgtacacnnnnnnncaatcgttaatcatcatgaccttttttaatcaacaaatccaa 508  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  7038770 ccaatccagactcttccttcatctctcgtgtaaccttcttcttccgtacactttttttcaatcgttaatcatcatgaccttttttaatcaacaaatccaa 7038869  T
Q  509 tttattttcaatcttattcacagtttttgtttgtccttcactaaagcttcaatcgatataaatactgttcagttcctttgctttgttgt 597  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7038870 tttattttcaatcttattcacagtttttgtttgtccttcactaaagcttcaatcgatataaatactgttcagttcctttgctttgttgt 7038958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 179 - 357
Target Start/End: Complemental strand, 39795418 - 39795240
Alignment:
Q  179 taaaggtctgtttgatgcgcatgatagagagacctgatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaa 278  Q
    ||||||| |||||| |||||| ||||||||||| ||||||||||| | |||| ||||||  ||||||   || |||||| ||| ||||| ||||||||||    
T  39795418 taaaggtttgtttggtgcgcaggatagagagacatgatatgataacactatcatatcctacttaaatatgttgtttggtgcaccaatagaatatgataaa 39795319  T
Q  279 ttaaacctattaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaacatgatag 357  Q
    ||||| | ||||| |||| |||| ||||||||   ||||||||  ||||||| |||||   ||||||||||||||||||    
T  39795318 ttaaatcgattactaatcatatcttattcatcccatgtaattcgcatccttagtttttaacgggttagcaacatgatag 39795240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 188 - 357
Target Start/End: Original strand, 32490848 - 32491017
Alignment:
Q  188 gtttgatgcgcatgatagagagacctgatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaaaccta 287  Q
    ||||| |||||| |||| ||||||  |||||||||| | |||| ||| || ||||||||| || |||||| ||| |||| || | |||||   |||||||    
T  32490848 gtttggtgcgcaggataaagagacaggatatgataacactatcatattctatttaaatcctttgtttggtgcaccaatatgaaaggataatcgaaaccta 32490947  T
Q  288 ttaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaacatgatag 357  Q
    || | ||| ||||| |||  ||| ||||| ||| ||||||||| |||| | |||||||||||| ||||||    
T  32490948 ttgctaattctatcctatcaatcctttgttattttaatccttagttttagctgggttagcaacctgatag 32491017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 215 - 290
Target Start/End: Original strand, 831794 - 831869
Alignment:
Q  215 atatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaaacctatta 290  Q
    ||||||||||||||||||||| ||||||||| |||| |||| | ||| || || | |||||||| |||||||||||    
T  831794 atatgataaaattatcttatcatgtttaaattcattgtttgatgcaccaagagaaaatgataaactaaacctatta 831869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 252 - 357
Target Start/End: Original strand, 20524861 - 20524966
Alignment:
Q  252 tttggtacactaataggatatgataaattaaacctattaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaaca 351  Q
    |||||| ||| |||| |||| ||||||||||||| ||||  |||| |||| |||  ||| ||||||||| ||||||||  |||||| ||||||| ||||     
T  20524861 tttggtgcaccaatatgatacgataaattaaacccattagtaatcatatcctatctatcctttgtaattttaatccttgatttttggtgggttaacaact 20524960  T
Q  352 tgatag 357  Q
    ||||||    
T  20524961 tgatag 20524966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 7973671 - 7973631
Alignment:
Q  9 gaagaagctaaattagtccactcaaattaacatcggagaga 49  Q
    ||||||||||||||||||||| |||||| ||||| ||||||    
T  7973671 gaagaagctaaattagtccacccaaattgacatcagagaga 7973631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 10499070 - 10499110
Alignment:
Q  9 gaagaagctaaattagtccactcaaattaacatcggagaga 49  Q
    |||||||||||||||| |||| |||||| ||||||||||||    
T  10499070 gaagaagctaaattagcccacccaaattgacatcggagaga 10499110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 51903839 - 51903879
Alignment:
Q  9 gaagaagctaaattagtccactcaaattaacatcggagaga 49  Q
    |||||||||||||||| ||||||||||| ||| ||||||||    
T  51903839 gaagaagctaaattagcccactcaaattgacaccggagaga 51903879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 4e-49; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 226 - 373
Target Start/End: Complemental strand, 36625668 - 36625521
Alignment:
Q  226 ttatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaaacctattaccaatcctatcgtattcatcttttgtaattctaat 325  Q
    ||||| |||||| |||||||   || |||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||| | ||||||||||||||    
T  36625668 ttatcatatcctatttaaatttgttgtttggtgcactaataggatatgataaattaaacctattacgaatcctatcctattcaccctttgtaattctaat 36625569  T
Q  326 ccttactttttgttgggttagcaacatgatagcataggcttatcatca 373  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36625568 ccttactttttgttgggttagcaacatgatagcatagacttatcatca 36625521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 213 - 356
Target Start/End: Original strand, 33451293 - 33451436
Alignment:
Q  213 tgatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaaacctattaccaatcctatcgtattcatctt 312  Q
    ||||||||||||| |||| ||||||  |||||| | || |||||| ||| |||| ||||||||||| |||||||||||| | | ||||| |||||||| |    
T  33451293 tgatatgataaaactatcgtatcctacttaaattcgttgtttggtgcaccaatatgatatgataaaataaacctattactacttctatcctattcatcct 33451392  T
Q  313 ttgtaattctaatccttactttttgttgggttagcaacatgata 356  Q
    |||||||| ||||||||| |||||| ||||||| ||||||||||    
T  33451393 ttgtaattataatccttagtttttgatgggttaacaacatgata 33451436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 183 - 357
Target Start/End: Complemental strand, 19181588 - 19181414
Alignment:
Q  183 ggtctgtttgatgcgcatgatagagagacctgatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaa 282  Q
    |||| ||||| ||| |||||||||||||| |||||||||||||||||| ||||||| |  |||| ||| |||||| ||| || | |||||||||||||||    
T  19181588 ggtccgtttggtgcacatgatagagagacatgatatgataaaattatcctatcctgatccaatctattgtttggtgcaccaacatgatatgataaattaa 19181489  T
Q  283 acctattaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaacatgatag 357  Q
    ||||||| | ||||||||| || ||||| ||| | ||| |  |||||| |||||| ||| ||||||||| |||||    
T  19181488 acctatttctaatcctatcctactcatcctttattatttttgtccttagtttttggtggattagcaacaagatag 19181414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 250 - 357
Target Start/End: Original strand, 44126011 - 44126118
Alignment:
Q  250 tatttggtacactaataggatatgataaattaaacctattaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaa 349  Q
    |||||||| ||  ||||||| |||||||||||||| |||| | ||||||||| |||||| |||||||  ||||||| |||  |||||| |||||||||||    
T  44126011 tatttggtgcagcaataggaaatgataaattaaacttatttctaatcctatcctattcaccttttgtttttctaattctttgtttttgatgggttagcaa 44126110  T
Q  350 catgatag 357  Q
    | ||||||    
T  44126111 cttgatag 44126118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 183 - 361
Target Start/End: Complemental strand, 45413945 - 45413767
Alignment:
Q  183 ggtctgtttgatgcgcatgatagagagacctgatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaa 282  Q
    |||| ||||| ||| | |||||| |||||  |||| |||| || |||| |||| || || ||||  || |||||| ||| ||||||| | ||||||||||    
T  45413945 ggtccgtttggtgcacttgatagggagacaggataggatagaactatcatatcttgattcaatcggttgtttggtgcaccaataggaaaggataaattaa 45413846  T
Q  283 acctattaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaacatgatagcata 361  Q
    ||||||| || |||||||| |||  | | ||||| ||| | ||||||| |||||| |||||||||||| ||||||||||    
T  45413845 acctatttcctatcctatcctatctaacctttgttatttttatccttagtttttggtgggttagcaacctgatagcata 45413767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 243 - 359
Target Start/End: Complemental strand, 26635376 - 26635260
Alignment:
Q  243 aatccattatttggtacactaataggatatgataaattaaacctattaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttggg 342  Q
    ||||| || |||||| ||| || | ||||||||||||| |||||||| ||||| ||||| || || || ||| | ||||| ||||||| |||||| ||||    
T  26635376 aatccgttttttggtgcaccaacatgatatgataaatttaacctatttccaattctatcctactcctcctttattattcttatccttagtttttggtggg 26635277  T
Q  343 ttagcaacatgatagca 359  Q
    |||||||| ||||||||    
T  26635276 ttagcaacctgatagca 26635260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 252 - 359
Target Start/End: Original strand, 2183304 - 2183411
Alignment:
Q  252 tttggtacactaataggatatgataaattaaacctattaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaaca 351  Q
    |||||| ||| ||||| | | ||||||||||||  ||| ||||||||||| ||| || | ||||| ||| | ||||||| |||||| ||||||||||||     
T  2183304 tttggtgcaccaatagaaaaggataaattaaactcatttccaatcctatcctatccaacctttgttatttttatccttaatttttggtgggttagcaacc 2183403  T
Q  352 tgatagca 359  Q
    ||||||||    
T  2183404 tgatagca 2183411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 301
Target Start/End: Complemental strand, 42964621 - 42964503
Alignment:
Q  183 ggtctgtttgatgcgcatgatagagagacctgatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaa 282  Q
    |||||||||| |||||| ||||   ||||  |||||||||||| |||| ||||||| | ||||||  |||||| | ||| ||||||| | ||||| ||||    
T  42964621 ggtctgtttggtgcgcaggataagcagacaggatatgataaaactatcctatcctgctgaaatccggtatttgttgcaccaataggaaaggataatttaa 42964522  T
Q  283 acctattaccaatcctatc 301  Q
    ||| |||||  ||||||||    
T  42964521 acccattacttatcctatc 42964503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 8e-41; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 187 - 452
Target Start/End: Original strand, 6452408 - 6452667
Alignment:
Q  187 tgtttgatgcgcatgatagagagacctgatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaaacct 286  Q
    |||||| |||||||||||| |||||  ||||||||||||||||| |||||  |||||||||||  |||| | ||| |||| |||||||||||||||||||    
T  6452408 tgtttggtgcgcatgatag-gagacaggatatgataaaattatcctatccaatttaaatccatggtttgatgcaccaataagatatgataaattaaacct 6452506  T
Q  287 attaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaacatgatagcataggcttatcatcag-catgcatgtta 385  Q
    ||||| |||| |||| ||||||   ||||||||||||||||||| ||||||||||||||| ||| | |||||||| ||||| || ||| |  |  | |||    
T  6452507 attactaatcttatcctattcacgctttgtaattctaatccttagtttttgttgggttagaaaccttatagcatatgcttaccaccagacgcgattatta 6452606  T
Q  386 ttttctttaccctccttcgatttccaatccagactcttccttcatctctcgtgtaaccttcttcttc 452  Q
    ||||||||| |||||||||||| ||||||||| ||    | ||||||||||||| ||||||||||||    
T  6452607 ttttcttta-cctccttcgattcccaatccagcct----cctcatctctcgtgt-accttcttcttc 6452667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 188 - 350
Target Start/End: Complemental strand, 40054633 - 40054471
Alignment:
Q  188 gtttgatgcgcatgatagagagacctgatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaaaccta 287  Q
    |||||||||||||||||  ||||| ||||||||||| | |||  |||||| ||||||||  || |||||| ||| ||||| | |||||||| ||||||||    
T  40054633 gtttgatgcgcatgataacgagacatgatatgataacactattatatcctatttaaatctcttgtttggtgcaccaatagaaaatgataaactaaaccta 40054534  T
Q  288 ttaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaac 350  Q
    ||   ||||||||| |||  ||| ||||| ||| ||||||||| |||| | ||||||||||||    
T  40054533 ttgttaatcctatcctatcaatcctttgttattttaatccttagttttagctgggttagcaac 40054471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 345
Target Start/End: Original strand, 6457533 - 6457700
Alignment:
Q  178 ttaaaggtctgtttgatgcgcatgatagagagacctgatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataa 277  Q
    |||| ||| |||||| ||| ||||||||||||||  ||||||||| || |||| |||| || || ||||  || |||||| ||| ||||| | |||||||    
T  6457533 ttaagggtatgtttggtgcacatgatagagagacaggatatgatagaactatcatatcatgattcaatctgttgtttggtgcaccaatagaaaatgataa 6457632  T
Q  278 attaaacctattaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggtta 345  Q
    |||||| | ||| |||||| |||| ||| || | ||||| ||| | ||||||| |||||| |||||||    
T  6457633 attaaatcaatttccaatcatatcttatccaccctttgttatttttatccttaatttttggtgggtta 6457700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 346
Target Start/End: Original strand, 7670386 - 7670480
Alignment:
Q  252 tttggtacactaataggatatgataaattaaacctattaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttag 346  Q
    |||||| ||| ||||| | ||||||| || ||||| || | ||||||||| |||| | ||||||||||||| ||||||| |||||| ||||||||    
T  7670386 tttggtgcaccaatagaaaatgataagtttaacctgtttctaatcctatcctattgagcttttgtaattcttatccttaatttttggtgggttag 7670480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 3e-31; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 214 - 355
Target Start/End: Original strand, 39594606 - 39594747
Alignment:
Q  214 gatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaaacctattaccaatcctatcgtattcatcttt 313  Q
    |||||||||||| |||| ||||||  |||||||| || |||||| ||| |||| |||||| ||||||||||||||||| |||| |||| |||||||| ||    
T  39594606 gatatgataaaactatcatatcctacttaaatccgttgtttggtgcaccaataagatatgctaaattaaacctattactaatcttatcatattcatcctt 39594705  T
Q  314 tgtaattctaatccttactttttgttgggttagcaacatgat 355  Q
    ||||||| | ||||||| |||||| |||||||||||||||||    
T  39594706 tgtaatttttatccttagtttttgatgggttagcaacatgat 39594747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 359
Target Start/End: Complemental strand, 41482590 - 41482419
Alignment:
Q  188 gtttgatgcgcatgatagagagacctgatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaaaccta 287  Q
    ||||| ||| ||||||||  |||| ||||| ||||||| |||| | ||||| || ||| |  | |||||| ||| || |||| | ||||| |||||||||    
T  41482590 gtttggtgcacatgataggaagacatgataggataaaactatcatctcctgatttaatgcgctgtttggtgcaccaacaggaaaggataacttaaaccta 41482491  T
Q  288 ttaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaacatgatagca 359  Q
    ||   |||| |||| || ||| | ||||| ||| | ||||||| |||||| |||||||||||| ||||||||    
T  41482490 tttttaatcatatcctactcaccctttgttatttttatccttagtttttggtgggttagcaacctgatagca 41482419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 271 - 361
Target Start/End: Original strand, 24429718 - 24429808
Alignment:
Q  271 atgataaattaaacctattaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaacatgatagcata 361  Q
    ||||||| ||||| |||||   ||||||||| || ||| | ||||| ||| | ||||||| |||||| |||||||||||| ||||||||||    
T  24429718 atgataatttaaaactatttataatcctatcttactcaccctttgttatttttatccttagtttttggtgggttagcaacctgatagcata 24429808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 214 - 346
Target Start/End: Complemental strand, 23319082 - 23318950
Alignment:
Q  214 gatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaaacctattaccaatcctatcgtattcatcttt 313  Q
    |||||||||| | |||| ||||||| |||||||  || |||||| ||| || | || | ||||| |||||||||||   ||||||||| |||| | | ||    
T  23319082 gatatgataacactatcatatcctgattaaatctgttgtttggtccaccaacatgaaaggataatttaaacctatttttaatcctatcctattgagcctt 23318983  T
Q  314 tgtaattctaatccttactttttgttgggttag 346  Q
    ||||||| | ||||||  |||||| ||||||||    
T  23318982 tgtaatttttatccttggtttttgatgggttag 23318950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 1e-27; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 490 - 597
Target Start/End: Original strand, 39466273 - 39466383
Alignment:
Q  490 ttttaatcaacaaatccaatttattttc-aatc--ttattcacagtttttgtttgtccttcactaaagcttcaatcgatataaatactgttcagttcctt 586  Q
    |||||||||||||||||||||| ||||  ||||  ||||| | ||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||    
T  39466273 ttttaatcaacaaatccaattttttttttaatcgcttattaatagtttttgtttgtcctttactatagcttcaatcgatacaaatactgttcagttcctt 39466372  T
Q  587 tgctttgttgt 597  Q
    |||||||||||    
T  39466373 tgctttgttgt 39466383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 189 - 357
Target Start/End: Original strand, 34731215 - 34731383
Alignment:
Q  189 tttgatgcgcatgatagagagacctgatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaaacctat 288  Q
    |||| ||||||||||| |||||   |||||||||| | |||| |||||| ||||||||| || |||||| ||| ||||||| | |||||| |||||||||    
T  34731215 tttggtgcgcatgataaagagataggatatgataacactatcatatcctatttaaatcccttgtttggtgcaccaataggaaaggataaactaaacctat 34731314  T
Q  289 taccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaacatgatag 357  Q
    |   ||||||||| |||  ||| ||||| ||| ||||||||| |||| | |||||||||||| ||||||    
T  34731315 tgttaatcctatcctatcaatcctttgttattttaatccttagttttagctgggttagcaacctgatag 34731383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 290
Target Start/End: Complemental strand, 16290887 - 16290786
Alignment:
Q  189 tttgatgcgcatgatagagagacctgatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaaacctat 288  Q
    |||| |||||| |||| ||||||  |||||||||||||||||||||||||||||||||| || |||||| | |  |||||| | |||||| ||||| |||    
T  16290887 tttggtgcgcaggataaagagacaggatatgataaaattatcttatcctgtttaaatcctttgtttggtgctcccataggaaaggataaaataaacatat 16290788  T
Q  289 ta 290  Q
    ||    
T  16290787 ta 16290786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 7010775 - 7010701
Alignment:
Q  215 atatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaaacctatt 289  Q
    |||||||||||||||| ||||||  |||||||  ||||||||| |||||||| ||||||||||| ||| ||||||    
T  7010775 atatgataaaattatcatatcctacttaaatctcttatttggtgcactaataagatatgataaaataatcctatt 7010701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 9187530 - 9187494
Alignment:
Q  9 gaagaagctaaattagtccactcaaattaacatcgga 45  Q
    |||||||||||||||||||||||||||| ||||||||    
T  9187530 gaagaagctaaattagtccactcaaattgacatcgga 9187494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 38270259 - 38270193
Alignment:
Q  383 ttattttctttaccctccttcgatttccaatccagactcttccttcatctctcgtgtaaccttcttcttc 452  Q
    ||||||||||||||||||||||||| |||| ||||   | |||| ||||| | |||||||||||||||||    
T  38270259 ttattttctttaccctccttcgattcccaacccag---cctcctccatcttttgtgtaaccttcttcttc 38270193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 3e-25; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 12595955 - 12595848
Alignment:
Q  178 ttaaaggtctgtttgatgcgcatgatagagagacctgatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataa 277  Q
    ||||||||| ||||| |||||| ||||||||||| |||||||||||||||||| |||||||||||||||  || |||||| || ||||| ||||||||||    
T  12595955 ttaaaggtccgtttggtgcgcaagatagagagacatgatatgataaaattatcctatcctgtttaaatcttttgtttggtgcagtaatatgatatgataa 12595856  T
Q  278 attaaacc 285  Q
    | ||||||    
T  12595855 actaaacc 12595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 357
Target Start/End: Original strand, 22573080 - 22573249
Alignment:
Q  188 gtttgatgcgcatgatagagagacctgatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaaaccta 287  Q
    ||||| |||||||||||  ||||| ||||||||| | | |||| |||||||  | ||||| || |||||| ||| || |||| ||||||| || |||||     
T  22573080 gtttggtgcgcatgataaggagacatgatatgattagaatatcctatcctgactcaatccgttgtttggtgcaccaacaggaaatgataagtttaacctg 22573179  T
Q  288 ttaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaacatgatag 357  Q
    || | ||||||||| |||| | | ||||||||||| ||||||| |||||| ||||||| |||||||||||    
T  22573180 tttctaatcctatcctattgaacctttgtaattcttatccttagtttttggtgggttaacaacatgatag 22573249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 361
Target Start/End: Original strand, 31734261 - 31734434
Alignment:
Q  188 gtttgatgcgcatgatagagagacctgatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaaaccta 287  Q
    ||||| ||| |||||||||||||| ||||||||||  | | || ||||||| || ||||| || |||||| ||| |||| || |||||||||||||||||    
T  31734261 gtttggtgcacatgatagagagacatgatatgataggactttcctatcctgctttaatccgttgtttggtgcaccaataagaaatgataaattaaaccta 31734360  T
Q  288 ttaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaacatgatagcata 361  Q
    || |||||| ||||  || || | ||||| ||| | ||||||| |||||| ||| ||| |||||||||| ||||    
T  31734361 tttccaatcttatcccatccaccctttgttatttttatccttagtttttggtggattaacaacatgataacata 31734434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 271 - 357
Target Start/End: Original strand, 556807 - 556895
Alignment:
Q  271 atgataaattaaacctattaccaatcctatcgtattcatcttttgtaattctaatcctt--actttttgttgggttagcaacatgatag 357  Q
    ||||||||||||||||||| | |||| |||| |||||| | |||||  |||||||||||    |||||| |||||||||||||||||||    
T  556807 atgataaattaaacctatttctaatcatatcctattcaccctttgtttttctaatcctttgtttttttggtgggttagcaacatgatag 556895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 357
Target Start/End: Complemental strand, 9028719 - 9028635
Alignment:
Q  273 gataaattaaacctattaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaacatgatag 357  Q
    ||||| |||||||||||   ||||||||| |||| | | ||||||||||| ||||||  |||||| |||||||||||| ||||||    
T  9028719 gataatttaaacctatttttaatcctatcctattgaacctttgtaattcttatccttggtttttgatgggttagcaacctgatag 9028635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 3346410 - 3346477
Alignment:
Q  215 atatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaa 282  Q
    |||||||||||||||| ||||||  |||||| |||| |||||| ||||||||| | | ||||||||||    
T  3346410 atatgataaaattatcctatcctaattaaattcattgtttggtgcactaatagaaaaagataaattaa 3346477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 11099882 - 11099842
Alignment:
Q  9 gaagaagctaaattagtccactcaaattaacatcggagaga 49  Q
    |||||| ||||||||||||| ||||||| ||||||||||||    
T  11099882 gaagaaactaaattagtccattcaaattgacatcggagaga 11099842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 214 - 361
Target Start/End: Complemental strand, 9383371 - 9383224
Alignment:
Q  214 gatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaaacctattaccaatcctatcgtattcatcttt 313  Q
    |||||||||||| ||||  |||||| ||||||||||| |||||| ||| |||||||   ||||||||||||| ||| | |||| |||| || ||| | ||    
T  9383371 gatatgataaaactatcacatcctgattaaatccattgtttggtgcaccaataggaacggataaattaaaccaatttctaatcttatcctactcaccctt 9383272  T
Q  314 tgtaattctaatccttactttttgttgggttagcaacatgatagcata 361  Q
    ||| ||| | ||||||| |||||| |||||||||||| ||||||||||    
T  9383271 tgttattttcatccttaatttttgatgggttagcaacctgatagcata 9383224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 183 - 361
Target Start/End: Original strand, 26793697 - 26793875
Alignment:
Q  183 ggtctgtttgatgcgcatgatagagagacctgatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaa 282  Q
    |||||||||| ||| |||||||   |||| |||||||||| || |||| ||||||| || ||||| || |||||| ||| ||||| | | ||||| ||||    
T  26793697 ggtctgtttggtgcacatgataagaagacatgatatgatagaactatcatatcctgattcaatccgttgtttggtgcaccaatagaaaaggataacttaa 26793796  T
Q  283 acctattaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaacatgatagcata 361  Q
    || |||| | ||||||||| || ||| | ||||| ||| | || |||| |||||| |||||||||||| ||||||||||    
T  26793797 acttatttctaatcctatcctaatcaacctttgttatttttattcttagtttttggtgggttagcaacctgatagcata 26793875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 263 - 357
Target Start/End: Complemental strand, 4076441 - 4076347
Alignment:
Q  263 aataggatatgataaattaaacctattaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaacatgatag 357  Q
    ||||||| | ||||||||||||||||||| ||||||||| ||||||   |||||  |||||||||||| |||||| ||| |||| ||| ||||||    
T  4076441 aataggaaaggataaattaaacctattactaatcctatcctattcactctttgtttttctaatccttagtttttggtggattaggaacctgatag 4076347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 263 - 356
Target Start/End: Complemental strand, 19806851 - 19806758
Alignment:
Q  263 aataggatatgataaattaaacctattaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaacatgata 356  Q
    ||||||| | ||||||||||||||||| | ||||||||| ||||||   |||||  |||||||||||| |||||| ||||||| |||| |||||    
T  19806851 aataggaaaggataaattaaacctatttctaatcctatcctattcactctttgtttttctaatccttagtttttggtgggttaacaacctgata 19806758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 188 - 317
Target Start/End: Complemental strand, 12855405 - 12855276
Alignment:
Q  188 gtttgatgcgcatgatagagagacctgatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaaaccta 287  Q
    ||||| ||| |||||||  |||||  |||||||||  |||||| |||||| |||||||||||| |||| | ||| ||||||| | |||| |  |||||||    
T  12855405 gtttggtgcacatgataaggagacaggatatgatatcattatcatatcctatttaaatccattgtttgatgcaccaataggaaaggatacaccaaaccta 12855306  T
Q  288 ttaccaatcctatcgtattcatcttttgta 317  Q
    ||||  ||| |||| |||||||| ||||||    
T  12855305 ttacttatcatatcctattcatcctttgta 12855276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 44107845 - 44107886
Alignment:
Q  178 ttaaaggtctgtttgatgcgcatgatagagagacctgatatg 219  Q
    ||||||||||||||||||| |||||||||||||| |||||||    
T  44107845 ttaaaggtctgtttgatgcacatgatagagagacatgatatg 44107886  T

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Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 20018619 - 20018667
Alignment:
Q  252 tttggtacactaataggatatgataaattaaacctattaccaatcctat 300  Q
    |||||||||| || | |||||||||||||||||||||||| ||||||||    
T  20018619 tttggtacaccaacatgatatgataaattaaacctattactaatcctat 20018667  T

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Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 309
Target Start/End: Complemental strand, 28884016 - 28883928
Alignment:
Q  221 taaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaaacctattaccaatcctatcgtattcat 309  Q
    ||||||||||||||| || || |||||| | |||||| ||| ||||| ||| |||||||||||| | || | ||||||||| |||||||    
T  28884016 taaaattatcttatcttgattcaatccactgtttggtgcaccaatagtataggataaattaaactttttcctaatcctatcttattcat 28883928  T

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Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 271 - 361
Target Start/End: Original strand, 6768290 - 6768380
Alignment:
Q  271 atgataaattaaacctattaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaacatgatagcata 361  Q
    |||||||||||||| |||| || |||||||  ||| || | ||||| ||| | ||||||| |||||| |||||||| ||| ||||||||||    
T  6768290 atgataaattaaacttatttcctatcctattctatccaacctttgttatttttatccttaatttttggtgggttaggaacctgatagcata 6768380  T

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Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 313
Target Start/End: Original strand, 30209719 - 30209816
Alignment:
Q  216 tatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaaacctattaccaatcctatcgtattcatcttt 313  Q
    ||||||||||||||| ||||||  |||||||  || |||||||||| ||||| | |||||||| ||| |  |||||  |||||||| |||||| ||||    
T  30209719 tatgataaaattatcatatcctacttaaatctgttgtttggtacaccaatagaaaatgataaaataatctcattacttatcctatcctattcaccttt 30209816  T

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Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 263 - 295
Target Start/End: Original strand, 7904167 - 7904199
Alignment:
Q  263 aataggatatgataaattaaacctattaccaat 295  Q
    |||||||||||||||||||||||||||| ||||    
T  7904167 aataggatatgataaattaaacctattatcaat 7904199  T

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Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 263 - 295
Target Start/End: Complemental strand, 8002774 - 8002742
Alignment:
Q  263 aataggatatgataaattaaacctattaccaat 295  Q
    |||||||||||||||||||||||||||| ||||    
T  8002774 aataggatatgataaattaaacctattatcaat 8002742  T

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Target: chr6 (Bit Score: 38; Significance: 0.000000000004; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 189 - 286
Target Start/End: Complemental strand, 12772038 - 12771941
Alignment:
Q  189 tttgatgcgcatgatagagagacctgatatgataaaattatcttatcctgtttaaatccattatttggtacactaataggatatgataaattaaacct 286  Q
    |||| |||||||||||||||||| |||||||||||   ||||||||| | ||||||||| || |||||| ||  |||| ||||||| |||| ||||||    
T  12772038 tttggtgcgcatgatagagagacatgatatgataactctatcttatcgtatttaaatcctttgtttggtgcagcaatatgatatgagaaatcaaacct 12771941  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 357
Target Start/End: Complemental strand, 8547530 - 8547436
Alignment:
Q  263 aataggatatgataaattaaacctattaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaacatgatag 357  Q
    ||||||| | ||||| ||||||||||| | |||| |||| |||||| | ||||| ||| | || |||| |||||| |||||||||||||||||||    
T  8547530 aataggaaaggataacttaaacctatttctaatcttatcatattcaccctttgttatttttatacttagtttttggtgggttagcaacatgatag 8547436  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 357
Target Start/End: Complemental strand, 8573883 - 8573789
Alignment:
Q  263 aataggatatgataaattaaacctattaccaatcctatcgtattcatcttttgtaattctaatccttactttttgttgggttagcaacatgatag 357  Q
    ||||||| ||||||| ||||||||||| | |||| |||| |||||| | ||||| ||| | || |||| |||||| ||||||||||||| |||||    
T  8573883 aataggaaatgataacttaaacctatttctaatcttatcatattcaccctttgttatttttatacttagtttttggtgggttagcaacaagatag 8573789  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 12633124 - 12633084
Alignment:
Q  9 gaagaagctaaattagtccactcaaattaacatcggagaga 49  Q
    |||||||||||||||||||||| ||||| |||| |||||||    
T  12633124 gaagaagctaaattagtccacttaaattgacattggagaga 12633084  T

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