View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19485_high_26 (Length: 292)
Name: NF19485_high_26
Description: NF19485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19485_high_26 |
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Alignment Details
Target: chr5 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 29513803 - 29514074
Alignment:
| Q |
18 |
tcttctgccagagaaaatcaaagcaaatattttgacaacagatttgaaacttttcagtgctgaattctgcttctttgttgaatcaatttctgaactatgt |
117 |
Q |
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| T |
29513803 |
tcttctgccagagaaaatcaaagcaaatattttgacaacagatttgaaacttttcagtgctgaattctgcttctttgttgaatcaatttctgaactatgt |
29513902 |
T |
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| Q |
118 |
tgaaaattagaattctttgttctttgactagactgatattgcaaattggtgcttgctgatttcttcatttgttgatgccaaaactgttgttgaagatcca |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29513903 |
tgaaaattagaattctttgttctttgactagactgatattgcaaattggtgcttgctgatttcttcatttgttgatgccaaaactgttgttgaagatcca |
29514002 |
T |
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| Q |
218 |
aagatcatttcttgtaccaaaaatttaagataaatgcaatcattgcatttggtcttttcttcccttataatt |
289 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29514003 |
aagatcatttcttgtaccaaaaatttaagataaatgcaatcattgcatttggtcttttcttcccttataatt |
29514074 |
T |
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