View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19485_high_27 (Length: 291)
Name: NF19485_high_27
Description: NF19485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19485_high_27 |
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Alignment Details
Target: chr4 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 18 - 281
Target Start/End: Complemental strand, 38211447 - 38211184
Alignment:
| Q |
18 |
gttgcatccaaccataatataatgatttggaggattccaaatttatttaaactaaaactaaatgaaagttaagagactaattaacaattttcacgaaaag |
117 |
Q |
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| T |
38211447 |
gttgcatccaaccataatataatgatttgtaggattcaaaatttatttaaactaaaactaaatgaaagttaagagactaattaacaattttcacgaaaag |
38211348 |
T |
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| Q |
118 |
ctttccagcttttagatgatatcaagatgctctcgttttggtggcttagggcaaaattcgtcaccttaatttgattgtagttattaaacttggtggctta |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38211347 |
ctttccagcttttagatgatatcaagatgctctcgttttggtggcttagggcaaaattcgtcaccttaatttgattgtagttattaaacttggtggctta |
38211248 |
T |
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| Q |
218 |
actcttttatgtgtttgagcattgactaagccccctattgtttctcctttcttacttacctatg |
281 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
38211247 |
actcttttatgtgtttgagcattgactaagccccctattgtttctcctttcttacttacttatg |
38211184 |
T |
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