View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19485_high_31 (Length: 265)
Name: NF19485_high_31
Description: NF19485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19485_high_31 |
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Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 17 - 247
Target Start/End: Original strand, 11485343 - 11485573
Alignment:
| Q |
17 |
tactatttaaatttagaaacacttcaacaattgttgcataaagtctatattacttatttttagagggataaagtctgtattactgaaaggccttagtaat |
116 |
Q |
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| T |
11485343 |
tactatttaaatttagaaacacttcaacaattgttgcataaagtctatattacttttttttagagggataaagtctgtattactgaaaggccttagtaat |
11485442 |
T |
|
| Q |
117 |
acactagagccccataacgccaacaagtttagtgttttatcaagagctagaaaaggaaaaaagggagagtggaggagtgtgatgcgcaggaggggcaacg |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11485443 |
acactagagccccataacgccaacaagtttagtgttttatcaagagctagaaaaggaaaaaagggagagtggaggagtgtgatgcgcaggaggggcaacg |
11485542 |
T |
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| Q |
217 |
aaggtagtgggggtgtggttgtgtgtgtggc |
247 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
11485543 |
aaggtagtgggggtgtggttgtgtgtgtggc |
11485573 |
T |
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