View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19485_high_42 (Length: 222)

Name: NF19485_high_42
Description: NF19485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19485_high_42
NF19485_high_42
[»] chr7 (44 HSPs)
chr7 (18-129)||(45433234-45433346)
chr7 (18-129)||(30244263-30244375)
chr7 (18-129)||(45754709-45754820)
chr7 (18-129)||(1085669-1085781)
chr7 (18-129)||(7517573-7517685)
chr7 (18-129)||(30245070-30245182)
chr7 (18-129)||(23430-23542)
chr7 (18-129)||(7554018-7554130)
chr7 (18-114)||(19122740-19122836)
chr7 (18-129)||(22566715-22566827)
chr7 (46-129)||(43241488-43241572)
chr7 (18-115)||(11845198-11845296)
chr7 (18-129)||(34218087-34218199)
chr7 (18-129)||(45434629-45434741)
chr7 (18-129)||(22567092-22567203)
chr7 (18-120)||(29157567-29157670)
chr7 (22-120)||(37533067-37533166)
chr7 (18-127)||(6054555-6054665)
chr7 (18-119)||(37533417-37533519)
chr7 (35-129)||(24177428-24177523)
chr7 (159-206)||(32919317-32919364)
chr7 (42-130)||(8128518-8128607)
chr7 (57-129)||(36109009-36109082)
chr7 (18-129)||(16569189-16569301)
chr7 (18-129)||(16596361-16596473)
chr7 (22-129)||(36939790-36939898)
chr7 (18-129)||(40094827-40094939)
chr7 (42-129)||(47129088-47129176)
chr7 (18-120)||(14681512-14681615)
chr7 (35-129)||(28301613-28301708)
chr7 (18-129)||(1085301-1085414)
chr7 (28-129)||(41910657-41910759)
chr7 (57-129)||(30245487-30245560)
chr7 (57-129)||(30255332-30255405)
chr7 (16-127)||(36622955-36623067)
chr7 (18-127)||(9901640-9901748)
chr7 (57-129)||(30244694-30244767)
chr7 (18-129)||(118354-118466)
chr7 (18-77)||(28300306-28300366)
chr7 (18-129)||(30032560-30032672)
chr7 (18-81)||(30253534-30253597)
chr7 (42-127)||(40230368-40230454)
chr7 (18-129)||(24838754-24838867)
chr7 (45-129)||(36534864-36534949)
[»] chr3 (55 HSPs)
chr3 (18-129)||(37990692-37990804)
chr3 (18-129)||(43346844-43346956)
chr3 (22-130)||(35946514-35946623)
chr3 (18-129)||(33803305-33803417)
chr3 (18-129)||(52634669-52634780)
chr3 (18-127)||(29644634-29644744)
chr3 (18-129)||(32462953-32463066)
chr3 (18-129)||(32589697-32589808)
chr3 (18-129)||(3135126-3135236)
chr3 (18-129)||(25739478-25739590)
chr3 (18-129)||(29644955-29645067)
chr3 (18-129)||(37991030-37991142)
chr3 (18-129)||(53118028-53118139)
chr3 (18-129)||(54017869-54017981)
chr3 (18-120)||(22304571-22304674)
chr3 (20-129)||(41359820-41359926)
chr3 (18-129)||(12114615-12114727)
chr3 (18-129)||(21832396-21832508)
chr3 (21-97)||(33362349-33362425)
chr3 (18-129)||(42342441-42342553)
chr3 (35-129)||(45901706-45901802)
chr3 (18-120)||(4823657-4823760)
chr3 (18-120)||(39389072-39389175)
chr3 (40-129)||(25755387-25755477)
chr3 (18-100)||(39935008-39935090)
chr3 (47-120)||(50612534-50612608)
chr3 (18-129)||(8327897-8328009)
chr3 (18-129)||(15773185-15773297)
chr3 (18-129)||(42342143-42342255)
chr3 (18-126)||(1634367-1634477)
chr3 (48-129)||(33175747-33175829)
chr3 (39-120)||(51886563-51886645)
chr3 (29-129)||(9240142-9240243)
chr3 (18-125)||(15772851-15772959)
chr3 (42-129)||(49336764-49336852)
chr3 (57-126)||(11661531-11661601)
chr3 (18-131)||(47964968-47965082)
chr3 (57-129)||(31190010-31190083)
chr3 (18-129)||(39914245-39914357)
chr3 (18-102)||(42584875-42584959)
chr3 (70-129)||(43346643-43346703)
chr3 (18-129)||(54018251-54018363)
chr3 (70-120)||(22304248-22304299)
chr3 (35-129)||(44160614-44160709)
chr3 (18-129)||(22304008-22304113)
chr3 (35-119)||(7767384-7767469)
chr3 (58-129)||(32462651-32462724)
chr3 (57-120)||(37726506-37726570)
chr3 (18-129)||(45395706-45395818)
chr3 (35-102)||(11661972-11662039)
chr3 (18-69)||(17731957-17732008)
chr3 (18-69)||(19033188-19033239)
chr3 (18-81)||(46546378-46546441)
chr3 (72-129)||(53577357-53577415)
chr3 (70-129)||(3135566-3135626)
[»] chr2 (45 HSPs)
chr2 (18-129)||(15880256-15880368)
chr2 (18-129)||(16542442-16542554)
chr2 (18-120)||(36178658-36178761)
chr2 (18-129)||(6421378-6421490)
chr2 (18-102)||(36178224-36178308)
chr2 (18-120)||(14745720-14745823)
chr2 (18-120)||(37106190-37106293)
chr2 (16-129)||(38796671-38796785)
chr2 (18-120)||(5543051-5543154)
chr2 (35-129)||(31899496-31899591)
chr2 (18-120)||(37105926-37106029)
chr2 (18-127)||(35580777-35580886)
chr2 (18-129)||(28531367-28531479)
chr2 (18-129)||(40679682-40679794)
chr2 (18-120)||(36178322-36178425)
chr2 (18-120)||(41283528-41283631)
chr2 (18-129)||(962591-962703)
chr2 (18-129)||(42514642-42514754)
chr2 (18-120)||(5542678-5542781)
chr2 (18-129)||(28254290-28254402)
chr2 (22-129)||(36005937-36006044)
chr2 (18-129)||(37895114-37895226)
chr2 (39-129)||(6712969-6713060)
chr2 (18-101)||(15511548-15511631)
chr2 (45-127)||(40733512-40733595)
chr2 (16-117)||(33731653-33731755)
chr2 (57-129)||(38796310-38796383)
chr2 (46-125)||(1769889-1769969)
chr2 (70-129)||(36785668-36785728)
chr2 (35-129)||(12529098-12529193)
chr2 (18-116)||(14745347-14745446)
chr2 (18-129)||(31468803-31468911)
chr2 (48-125)||(7598606-7598684)
chr2 (42-131)||(37632674-37632764)
chr2 (48-127)||(40733878-40733958)
chr2 (35-101)||(28254182-28254248)
chr2 (58-129)||(5367448-5367520)
chr2 (18-102)||(6422131-6422215)
chr2 (18-129)||(33561504-33561616)
chr2 (18-129)||(33953824-33953936)
chr2 (75-129)||(6421297-6421352)
chr2 (65-129)||(29676896-29676961)
chr2 (18-99)||(31259669-31259750)
chr2 (27-127)||(37894754-37894855)
chr2 (58-102)||(40163466-40163510)
[»] chr5 (44 HSPs)
chr5 (18-127)||(26074607-26074717)
chr5 (18-120)||(18603173-18603276)
chr5 (18-120)||(32487396-32487498)
chr5 (18-120)||(6500453-6500555)
chr5 (18-115)||(11417030-11417128)
chr5 (18-130)||(13415813-13415926)
chr5 (18-126)||(40296368-40296477)
chr5 (22-129)||(26075219-26075327)
chr5 (18-129)||(42405649-42405761)
chr5 (18-116)||(41170640-41170739)
chr5 (18-129)||(3295398-3295508)
chr5 (18-129)||(6224189-6224301)
chr5 (18-129)||(12662705-12662817)
chr5 (22-129)||(26074839-26074947)
chr5 (18-101)||(9498707-9498790)
chr5 (18-120)||(6500825-6500927)
chr5 (28-120)||(27502099-27502192)
chr5 (18-129)||(299482-299594)
chr5 (18-129)||(15370092-15370204)
chr5 (18-129)||(26074199-26074311)
chr5 (18-129)||(41632775-41632887)
chr5 (36-126)||(3295086-3295176)
chr5 (18-129)||(25327928-25328040)
chr5 (18-120)||(29549308-29549411)
chr5 (35-129)||(42508605-42508700)
chr5 (22-127)||(35150002-35150107)
chr5 (36-129)||(36492288-36492382)
chr5 (45-129)||(1028597-1028682)
chr5 (60-120)||(7768852-7768913)
chr5 (18-129)||(24489259-24489369)
chr5 (18-130)||(36568620-36568733)
chr5 (18-129)||(34753078-34753190)
chr5 (18-120)||(624198-624301)
chr5 (54-120)||(5723880-5723947)
chr5 (55-127)||(300954-301027)
chr5 (18-102)||(33747792-33747876)
chr5 (18-97)||(15370428-15370507)
chr5 (43-120)||(26074320-26074398)
chr5 (42-129)||(39309677-39309764)
chr5 (18-84)||(2411046-2411112)
chr5 (18-84)||(26590963-26591029)
chr5 (36-129)||(31509616-31509710)
chr5 (36-129)||(35167909-35168003)
chr5 (58-129)||(35914842-35914914)
[»] scaffold0078 (2 HSPs)
scaffold0078 (18-129)||(5350-5462)
scaffold0078 (18-129)||(4975-5087)
[»] chr8 (51 HSPs)
chr8 (18-129)||(3038343-3038455)
chr8 (18-129)||(34834869-34834981)
chr8 (18-120)||(1013924-1014027)
chr8 (18-120)||(3669689-3669792)
chr8 (18-129)||(30359602-30359714)
chr8 (18-129)||(33113420-33113532)
chr8 (22-120)||(45121967-45122066)
chr8 (18-127)||(45122110-45122220)
chr8 (18-129)||(9482657-9482767)
chr8 (18-126)||(34835205-34835314)
chr8 (18-129)||(30359264-30359376)
chr8 (18-120)||(20870626-20870731)
chr8 (18-129)||(45121709-45121820)
chr8 (35-119)||(3037778-3037865)
chr8 (45-129)||(8794104-8794189)
chr8 (18-102)||(5420672-5420756)
chr8 (18-120)||(3670062-3670165)
chr8 (35-129)||(9309348-9309443)
chr8 (38-124)||(18372676-18372762)
chr8 (35-129)||(25561886-25561981)
chr8 (18-129)||(40518062-40518176)
chr8 (18-119)||(147454-147556)
chr8 (18-98)||(9483240-9483320)
chr8 (38-129)||(18373004-18373095)
chr8 (18-129)||(37544543-37544655)
chr8 (38-129)||(41972151-41972243)
chr8 (18-129)||(43274832-43274944)
chr8 (42-127)||(1513992-1514078)
chr8 (18-129)||(6876915-6877028)
chr8 (18-120)||(30441083-30441190)
chr8 (18-127)||(40518577-40518687)
chr8 (42-130)||(9608737-9608826)
chr8 (18-99)||(45122648-45122729)
chr8 (18-129)||(70327-70438)
chr8 (57-119)||(18372791-18372854)
chr8 (18-97)||(32305503-32305582)
chr8 (57-115)||(41416263-41416322)
chr8 (18-84)||(9507821-9507887)
chr8 (58-119)||(18372349-18372411)
chr8 (18-126)||(34835470-34835580)
chr8 (18-126)||(34835736-34835846)
chr8 (18-118)||(18380070-18380171)
chr8 (18-129)||(8918817-8918929)
chr8 (18-102)||(18372047-18372131)
chr8 (18-120)||(6731906-6732000)
chr8 (46-120)||(40579587-40579662)
chr8 (37-129)||(9308970-9309065)
chr8 (57-102)||(25561736-25561781)
chr8 (70-126)||(45123002-45123059)
chr8 (57-120)||(1014337-1014401)
chr8 (64-129)||(147822-147888)
[»] chr6 (36 HSPs)
chr6 (18-129)||(16107671-16107783)
chr6 (18-129)||(2377747-2377859)
chr6 (18-129)||(16454568-16454680)
chr6 (18-117)||(32460633-32460733)
chr6 (35-129)||(16108056-16108151)
chr6 (18-120)||(29518505-29518608)
chr6 (18-120)||(29518922-29519025)
chr6 (18-120)||(32741181-32741284)
chr6 (18-120)||(3409261-3409364)
chr6 (18-120)||(26544051-26544154)
chr6 (18-120)||(35210206-35210309)
chr6 (35-120)||(2378128-2378214)
chr6 (18-129)||(2843547-2843660)
chr6 (18-118)||(3415462-3415563)
chr6 (18-102)||(1127381-1127465)
chr6 (18-129)||(2578496-2578607)
chr6 (18-129)||(10074416-10074528)
chr6 (18-120)||(3058228-3058331)
chr6 (18-120)||(14748391-14748494)
chr6 (20-129)||(2579927-2580037)
chr6 (35-127)||(9062419-9062512)
chr6 (18-129)||(16454900-16455012)
chr6 (22-120)||(593766-593865)
chr6 (18-101)||(1846770-1846853)
chr6 (36-120)||(3409662-3409747)
chr6 (18-129)||(10911558-10911671)
chr6 (18-129)||(1950238-1950350)
chr6 (22-129)||(10074048-10074156)
chr6 (35-100)||(5958673-5958738)
chr6 (18-129)||(10073669-10073779)
chr6 (47-129)||(5832108-5832191)
chr6 (18-129)||(8481920-8482031)
chr6 (63-129)||(2579203-2579270)
chr6 (18-127)||(6999849-6999959)
chr6 (16-117)||(2579543-2579645)
chr6 (57-102)||(35210499-35210544)
[»] chr1 (49 HSPs)
chr1 (18-129)||(17294570-17294682)
chr1 (18-129)||(34364918-34365030)
chr1 (16-120)||(44290509-44290614)
chr1 (18-120)||(3550722-3550825)
chr1 (22-120)||(44290882-44290981)
chr1 (18-129)||(26661575-26661687)
chr1 (18-129)||(41157368-41157480)
chr1 (35-129)||(29798192-29798287)
chr1 (35-129)||(41184495-41184590)
chr1 (18-126)||(11977276-11977385)
chr1 (18-129)||(37556104-37556216)
chr1 (18-129)||(31767214-31767326)
chr1 (18-129)||(34364500-34364612)
chr1 (35-129)||(41142365-41142460)
chr1 (44-120)||(3537226-3537303)
chr1 (18-129)||(24600367-24600479)
chr1 (18-129)||(34649431-34649543)
chr1 (18-129)||(40082400-40082511)
chr1 (15-129)||(66522-66637)
chr1 (35-129)||(3875401-3875496)
chr1 (18-120)||(32594769-32594872)
chr1 (18-114)||(14318875-14318972)
chr1 (45-129)||(37850680-37850765)
chr1 (18-102)||(3537652-3537736)
chr1 (18-129)||(5320018-5320130)
chr1 (18-129)||(22077548-22077660)
chr1 (18-129)||(26661951-26662063)
chr1 (18-129)||(38804408-38804520)
chr1 (18-129)||(41156984-41157096)
chr1 (18-120)||(41759485-41759588)
chr1 (45-119)||(50052103-50052178)
chr1 (48-126)||(45084378-45084457)
chr1 (18-120)||(48588541-48588644)
chr1 (57-129)||(37555723-37555796)
chr1 (18-129)||(30630691-30630803)
chr1 (58-129)||(39066293-39066365)
chr1 (18-118)||(9955911-9956014)
chr1 (37-127)||(22077900-22077991)
chr1 (18-89)||(44043825-44043896)
chr1 (35-102)||(45494044-45494115)
chr1 (18-101)||(66140-66224)
chr1 (54-129)||(4878796-4878872)
chr1 (41-101)||(5528830-5528890)
chr1 (42-129)||(21378118-21378206)
chr1 (35-129)||(44685449-44685545)
chr1 (18-101)||(10351182-10351265)
chr1 (18-129)||(22793271-22793384)
chr1 (38-98)||(22077183-22077243)
chr1 (74-129)||(45839620-45839675)
[»] scaffold0391 (2 HSPs)
scaffold0391 (16-129)||(1157-1271)
scaffold0391 (72-129)||(3092-3150)
[»] scaffold0734 (2 HSPs)
scaffold0734 (30-129)||(5770-5870)
scaffold0734 (57-129)||(5389-5462)
[»] scaffold0702 (2 HSPs)
scaffold0702 (18-129)||(567-679)
scaffold0702 (57-120)||(234-298)
[»] chr4 (64 HSPs)
chr4 (18-129)||(4955368-4955480)
chr4 (18-129)||(34646700-34646812)
chr4 (18-129)||(41707516-41707627)
chr4 (35-129)||(52884880-52884975)
chr4 (18-129)||(54108908-54109017)
chr4 (18-129)||(54936193-54936301)
chr4 (18-129)||(25483329-25483441)
chr4 (45-129)||(45489409-45489494)
chr4 (18-129)||(20825829-20825941)
chr4 (18-113)||(44620362-44620458)
chr4 (35-130)||(52884687-52884783)
chr4 (18-120)||(50630806-50630909)
chr4 (18-120)||(55933175-55933278)
chr4 (20-129)||(22028014-22028124)
chr4 (16-129)||(36572012-36572126)
chr4 (19-120)||(49880162-49880264)
chr4 (18-129)||(10245913-10246024)
chr4 (18-129)||(20826210-20826322)
chr4 (18-129)||(36629230-36629342)
chr4 (18-125)||(54017646-54017754)
chr4 (35-129)||(39404391-39404486)
chr4 (18-120)||(41370359-41370462)
chr4 (35-129)||(49076516-49076611)
chr4 (41-119)||(50459724-50459803)
chr4 (18-129)||(1731698-1731810)
chr4 (18-129)||(2740693-2740805)
chr4 (18-129)||(2741064-2741176)
chr4 (18-120)||(16888867-16888970)
chr4 (42-128)||(49076906-49076992)
chr4 (18-127)||(3340802-3340912)
chr4 (18-100)||(18932800-18932882)
chr4 (18-127)||(39404013-39404123)
chr4 (56-129)||(44620289-44620363)
chr4 (18-130)||(39792911-39793024)
chr4 (18-129)||(22183315-22183427)
chr4 (18-129)||(36608712-36608824)
chr4 (156-200)||(39599461-39599505)
chr4 (45-128)||(44620654-44620738)
chr4 (18-102)||(44621023-44621107)
chr4 (18-102)||(45496826-45496910)
chr4 (18-129)||(50002419-50002531)
chr4 (35-129)||(3244519-3244614)
chr4 (18-101)||(6975507-6975590)
chr4 (18-119)||(49302907-49303011)
chr4 (57-102)||(54343091-54343136)
chr4 (18-129)||(3341121-3341233)
chr4 (50-129)||(3700358-3700438)
chr4 (18-129)||(32941174-32941286)
chr4 (18-102)||(54017753-54017837)
chr4 (57-130)||(54741268-54741342)
chr4 (57-129)||(4390191-4390264)
chr4 (16-120)||(16889585-16889690)
chr4 (56-128)||(44621420-44621493)
chr4 (47-120)||(54108540-54108612)
chr4 (35-130)||(10246339-10246435)
chr4 (56-129)||(44620937-44621012)
chr4 (71-129)||(19504698-19504757)
chr4 (18-129)||(22028420-22028534)
chr4 (18-68)||(3271842-3271892)
chr4 (71-120)||(50788087-50788137)
chr4 (35-104)||(48111766-48111835)
chr4 (17-129)||(51768110-51768223)
chr4 (41-132)||(34004658-34004749)
chr4 (22-124)||(40067041-40067145)
[»] scaffold0171 (1 HSPs)
scaffold0171 (35-129)||(17526-17621)
[»] scaffold0027 (1 HSPs)
scaffold0027 (35-101)||(47382-47448)
[»] scaffold0504 (1 HSPs)
scaffold0504 (46-129)||(10192-10276)


Alignment Details
Target: chr7 (Bit Score: 77; Significance: 7e-36; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 45433346 - 45433234
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||| | |||||||||||    
T  45433346 actcttacccaaaatcttaaggcaataggtttatgagttctcttacttataaggtgttcaacctttactcttttatccgatgtggatcatataactcaca 45433247  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  45433246 cttgtacacaaca 45433234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 30244375 - 30244263
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||||||||||||||||||| |||||||||||| ||| ||||||||||| | ||||||||||||||| || |||||||||||    
T  30244375 actcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtcttcaacctttactcttttatccgatgtgggacatataactcaca 30244276  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  30244275 cttgtacacaaca 30244263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 45754820 - 45754709
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaactataactcacac 117  Q
    |||||||| ||||| | |||||| ||||||||||||||  ||||||||||| |||||||||| |||| ||||||||||||||||||  ||||||||||||    
T  45754820 actcttacccaaaaccttaaggctatgggtttatgagtcatcttacttataaggtgttcaacatttactattttatccgatgtggacatataactcacac 45754721  T
Q  118 ttgtacacaaca 129  Q
    ||||||||||||    
T  45754720 ttgtacacaaca 45754709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 1085669 - 1085781
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||||||||||| || ||||||||||||  |||||||||||||| ||||||||||||||||| || |||||||||||    
T  1085669 actcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgggacatataactcaca 1085768  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  1085769 cttgcacacaaca 1085781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 7517685 - 7517573
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||||||||||| || |||||||||||| ||||||||||||||| | ||||||||||||||| || |||||||||||    
T  7517685 actcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcaca 7517586  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  7517585 cttgcacacaaca 7517573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 30245182 - 30245070
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||| ||||||| ||  ||||||||||| ||||||||||||||| | |||||||||||||||||| |||||||||||    
T  30245182 actcttacccaaaaccttaaggcaatgagtttatgggtcgtcttacttataaggtgttcaacctttactcttttatccgatgtggaacatataactcaca 30245083  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  30245082 cttgtacacaaca 30245070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 23430 - 23542
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||||||| |||||||| || |||||||||||| ||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  23430 actcttacccaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattgtatccgatgtggaacatataactcaca 23529  T
Q  117 cttgtacacaaca 129  Q
     ||| ||||||||    
T  23530 attgcacacaaca 23542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 7554130 - 7554018
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||| |||||||||||  | |||||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||||    
T  7554130 actcttacccaaaaccttaaggctatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcaca 7554031  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  7554030 cttgcacacaaca 7554018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 19122836 - 19122740
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaactataactca 114  Q
    |||||||| ||||| | ||||||||||| ||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||  |||||||||    
T  19122836 actcttacccaaaaccttaaggcaatggatttatgagtcctcttacttataaggtgttcaacctttactattttatccgatgtggacatataactca 19122740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 22566715 - 22566827
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||||||||||| || |||||||||||| ||||||||||||||| | ||||||||||||||| || ||| |||||||    
T  22566715 actcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatattactcaca 22566814  T
Q  117 cttgtacacaaca 129  Q
    |||| | ||||||    
T  22566815 cttgcatacaaca 22566827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 43241572 - 43241488
Alignment:
Q  46 gtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||||||||| || ||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||    
T  43241572 gtttatgagtccttttacttataaggtgttcaacctttatttttttatccgatgtggaacatataactcacacttgcacacaaca 43241488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 11845296 - 11845198
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcac 115  Q
    |||||||  ||||| | ||||||||||| |||||| || |||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  11845296 actcttatccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatataactcac 11845198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 34218087 - 34218199
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| ||||| | |||| |||||||||||||||| |||| ||||||| |||||||||| |||| | |||||||||||||| ||  |||||||||||    
T  34218087 actcttacccaaaaccttaagacaatgggtttatgagtcctctcacttataaggtgttcaacatttacttttttatccgatgtgagacatataactcaca 34218186  T
Q  117 cttgtacacaaca 129  Q
     ||||||||||||    
T  34218187 tttgtacacaaca 34218199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 45434741 - 45434629
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||||| |  ||||||| || |||||||||||| ||||||||||||||| | ||||||||||||||| || ||||||| |||    
T  45434741 actcttacccaaaaccttaaggcagtaagtttatgggtcctcttacttataaggtgttcaacctttacttttttatccgatgtgggacatataacttaca 45434642  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  45434641 cttgtacacaaca 45434629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 22567092 - 22567203
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaactataactcacac 117  Q
    ||||||||  |||| | |||||||||| ||||||| || |||||||||||| ||||||||||||||| | ||||||||||||||||  ||| ||||||||    
T  22567092 actcttaccaaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtggacatattactcacac 22567191  T
Q  118 ttgtacacaaca 129  Q
    ||| | ||||||    
T  22567192 ttgcatacaaca 22567203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 29157670 - 29157567
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||||||||| |||||| ||  ||||||||||| ||||||||||||||| ||||||||||| ||||| || |||||||||||    
T  29157670 actcttacccaaaaccttaaggcaatggatttatgggtcgtcttacttataaggtgttcaacctttactattttatccggtgtgggacatataactcaca 29157571  T
Q  117 cttg 120  Q
    ||||    
T  29157570 cttg 29157567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 37533067 - 37533166
Alignment:
Q  22 ttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttg 120  Q
    |||| ||||| | |||||||||| ||||||| || |||||||||||| ||||||||||||||| |||||||||| |||||| || |||||||||||||||    
T  37533067 ttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataactcacacttg 37533166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 6054665 - 6054555
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| ||||| | |||||||||| ||||||| || |||||||||||| |||||||||| |||| |||||||||||||||| ||  ||||||| |||    
T  6054665 actcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtgagacatataactaaca 6054566  T
Q  117 cttgtacacaa 127  Q
    ||||| |||||    
T  6054565 cttgtccacaa 6054555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 37533417 - 37533519
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||||||||| |||||| || |||||||||||| ||||||||||||||| |||||||| | |||| |||| |||||||||||    
T  37533417 actcttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattttattcaatgtagaacatataactcaca 37533516  T
Q  117 ctt 119  Q
    |||    
T  37533517 ctt 37533519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 24177523 - 24177428
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||||||||||||||||| || | |||||||||| |||||||| |||||| | ||||||||||||||| || ||||||||| ||||| ||||||||    
T  24177523 taaggcaatgggtttatgggtccgcttacttataaggtgttcagcctttactcttttatccgatgtgggacatataactcatacttgcacacaaca 24177428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 32919364 - 32919317
Alignment:
Q  159 aaatttttatggttgccttcttctgcgctatcttccaccaaagatatt 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32919364 aaatttttatggttgccttcttctgcgctatcttccaccaaagatatt 32919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 130
Target Start/End: Original strand, 8128518 - 8128607
Alignment:
Q  42 atgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaacag 130  Q
    ||||||||||| || ||||||| |||| ||||||||||||||||| || |||||||| ||| || ||||||||||||||| |||||||||    
T  8128518 atgggtttatgggtcctcttacatataaggtgttcaacctttatttttctatccgatatgggacatataactcacacttgcacacaacag 8128607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 36109009 - 36109082
Alignment:
Q  57 ctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaaca 129  Q
    |||||||||||| ||||||||||||||| | |||||||||||||| ||| ||||||||||||||| ||||||||    
T  36109009 ctcttacttataaggtgttcaacctttactcttttatccgatgtgagaaatataactcacacttgcacacaaca 36109082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 16569301 - 16569189
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    ||||||||  |||| | |||||||||||||||||| || |||||||||||| ||| ||||||||||| | || ||||||||||| ||  |||||||||||    
T  16569301 actcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcaca 16569202  T
Q  117 cttgtacacaaca 129  Q
    |||| | ||||||    
T  16569201 cttgcatacaaca 16569189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 16596361 - 16596473
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    ||||||||  |||| | |||||||||||||||||| || |||||||||||| ||| ||||||||||| | || ||||||||||| ||  |||||||||||    
T  16596361 actcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcaca 16596460  T
Q  117 cttgtacacaaca 129  Q
    |||| | ||||||    
T  16596461 cttgcatacaaca 16596473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 36939790 - 36939898
Alignment:
Q  22 ttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttg 120  Q
    |||| ||||| | ||||||||||| |||||| || |||||||||||| |||||||||| |||| |||||||| |||| ||| || |||||||||||||||    
T  36939790 ttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacttttactattttatacgatttgggacatataactcacacttg 36939889  T
Q  121 tacacaaca 129  Q
     ||| ||||    
T  36939890 cacagaaca 36939898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 40094827 - 40094939
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| ||||| | |||| | ||||||||||| || |||||||||||| |||||| |||||||| | |||||| ||||||| ||  |||||||||||    
T  40094827 actcttacccaaaaccttaagacgatgggtttatgggtcctcttacttataaggtgttgaacctttactcttttattcgatgtgagacatataactcaca 40094926  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  40094927 cttgcacacaaca 40094939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 42 - 129
Target Start/End: Complemental strand, 47129176 - 47129088
Alignment:
Q  42 atgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaaca 129  Q
    ||||||||||| || |||||||||||| |  |||||||||||| |||||||||||||||| ||  |||||||||||||||| |||||||    
T  47129176 atgggtttatgggtcctcttacttataagaggttcaacctttactattttatccgatgtgagacatataactcacacttgtgcacaaca 47129088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 14681615 - 14681512
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||| ||||||||||||| |  |||||||||| | ||||||||||||||| ||||||||| ||||||| || ||||||| |||    
T  14681615 actcttacccaaaaccttaagacaatgggtttatgggccctcttacttacaaggtgttcaacctttactattttatctgatgtgggacatataacttaca 14681516  T
Q  117 cttg 120  Q
    ||||    
T  14681515 cttg 14681512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 28301613 - 28301708
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaaca 129  Q
    |||||||||||||||||| || |||||||||||| |||||||| | |||| | || ||||||||||| ||  ||||||||||||||| ||||||||    
T  28301613 taaggcaatgggtttatgggtcctcttacttataaggtgttcagcttttacttttctatccgatgtgagacatataactcacacttgcacacaaca 28301708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 1085301 - 1085414
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac--tataactcac 115  Q
    |||||||| ||||| | |||||||||| ||||||| ||||||||||||||  | |||||||| |||| ||||||||||||| ||| ||   | |||||||    
T  1085301 actcttacccaaaaccttaaggcaatgagtttatgggttctcttacttatgagttgttcaacttttactattttatccgatatgggacataaaaactcac 1085400  T
Q  116 acttgtacacaaca 129  Q
    ||||| ||||||||    
T  1085401 acttgcacacaaca 1085414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 41910657 - 41910759
Alignment:
Q  28 aaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacaca 126  Q
    |||||| |||| ||||||||||||| || |||| | ||||| ||| ||||||||||| | ||||||||||||||| || ||||||||||||||  |||||    
T  41910657 aaaatcttaagccaatgggtttatgggtcctctcagttataaggtattcaacctttactcttttatccgatgtgggacatataactcacacttacacaca 41910756  T
Q  127 aca 129  Q
    |||    
T  41910757 aca 41910759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 30245560 - 30245487
Alignment:
Q  57 ctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||||||||||| ||||||||||||||| | ||||||| ||||||| || ||||||||||||||| ||||||||    
T  30245560 ctcttacttataaggtgttcaacctttactcttttatctgatgtgggacatataactcacacttgcacacaaca 30245487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 30255405 - 30255332
Alignment:
Q  57 ctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||||||||||| ||||||||||||||| | ||||||||||||||| || |||||| |||||||| ||||||||    
T  30255405 ctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataacgcacacttgcacacaaca 30255332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 36623067 - 36622955
Alignment:
Q  16 atactcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactca 114  Q
    |||||| ||| ||||| | ||||||||||| ||||||  | ||| ||||||||   |||| |||||||| ||||||||||||||||| || |||||||||    
T  36623067 atactcctacccaaaaccttaaggcaatggatttatggatcctcctacttataaaatgtttaacctttactattttatccgatgtgggacatataactca 36622968  T
Q  115 cacttgtacacaa 127  Q
    |||||| ||||||    
T  36622967 cacttgcacacaa 36622955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 9901748 - 9901640
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaactataactcacac 117  Q
    |||||||| ||||| | |||| ||||| |||||||  | |||| || |||| | ||||||||||||| | ||||||||||||||||  ||||||||||||    
T  9901748 actcttacccaaaaccttaagacaatgagtttatggatcctct-acgtataagatgttcaacctttactgttttatccgatgtggacatataactcacac 9901650  T
Q  118 ttgtacacaa 127  Q
    || |||||||    
T  9901649 ttatacacaa 9901640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 30244767 - 30244694
Alignment:
Q  57 ctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||||| ||||| ||||||||||||||| | |||||||| |||||| || ||||||||||||||| ||||||||    
T  30244767 ctcttatttataaggtgttcaacctttactcttttatccaatgtgggacatataactcacacttgcacacaaca 30244694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 118354 - 118466
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | || || ||||||||||||  | |||||||||||  ||||||||||||||| | || |||| ||||||| || ||||||| |||    
T  118354 actcttacccaaaaccttacggtaatgggtttatggatcctcttacttattaggtgttcaacctttacttttctatctgatgtgggacatataacttaca 118453  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  118454 cttgcacacaaca 118466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 28300306 - 28300366
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttat-gagttctcttacttatatggtgttca 77  Q
    |||||||| ||||||| ||||||||||||||||| | ||||||||||||||| ||||||||    
T  28300306 actcttacccaaaatcttaaggcaatgggtttatggggttctcttacttataaggtgttca 28300366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 30032672 - 30032560
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||| || ||||||||  | |||||||||||| ||||||||||  ||| | |||||| |||||||| || |||||||||||    
T  30032672 actcttacccaaaaccttaaggctataggtttatggatactcttacttataaggtgttcaacacttactcttttattcgatgtgggacatataactcaca 30032573  T
Q  117 cttgtacacaaca 129  Q
    | ||||| |||||    
T  30032572 catgtacgcaaca 30032560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 30253597 - 30253534
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacct 81  Q
    |||||||| ||||| | |||||||||| ||||||| ||||||||||||||| ||| ||||||||    
T  30253597 actcttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtcttcaacct 30253534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 40230368 - 40230454
Alignment:
Q  42 atgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaa 127  Q
    ||||||||||| || |||||||||||| | |||||||| |||| | |||||| |||||||| || ||||||| ||||||| ||||||    
T  40230368 atgggtttatgggtcctcttacttataagatgttcaacttttacttttttattcgatgtgggacatataacttacacttgcacacaa 40230454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 24838754 - 24838867
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttct-cttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcac 115  Q
    |||||||| ||||| | |||| ||| |||||||||  | || |||||||||| ||||||||||||||| | |||||| ||||||| ||  ||||||| ||    
T  24838754 actcttacccaaaaccttaagacaacgggtttatggatccttcttacttataaggtgttcaacctttactcttttattcgatgtgagacatataacttac 24838853  T
Q  116 acttgtacacaaca 129  Q
    |||| |||||||||    
T  24838854 acttatacacaaca 24838867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 36534864 - 36534949
Alignment:
Q  45 ggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||||||| || |||||||||||| |||||||||||| || | |||||||||| |||| || ||||| | ||||||| ||||||||    
T  36534864 ggtttatgggtcctcttacttataaggtgttcaacctctactgttttatccgaggtgggacatataagttacacttgcacacaaca 36534949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 37990692 - 37990804
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||| |||||||||| |||||||||||| |||||||||| |||| |||||||||||||||||||| |||||||||||    
T  37990692 actcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactcaca 37990791  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  37990792 cttgtacacaaca 37990804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 43346844 - 43346956
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||| ||||||| ||||||||||||||| ||||||||||||||| ||||||||| ||||||| || |||||||||||    
T  43346844 actcttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcaca 43346943  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  43346944 cttgtacacaaca 43346956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 35946623 - 35946514
Alignment:
Q  22 ttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttg 120  Q
    |||| ||||| | |||||||| ||||||||| || |||||||||||| ||||||||||||||| | ||||||||||||||| || |||||||||||||||    
T  35946623 ttacccaaaaccttaaggcaacgggtttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttg 35946524  T
Q  121 tacacaacag 130  Q
    ||||||||||    
T  35946523 tacacaacag 35946514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 33803305 - 33803417
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||| | | ||| |||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||    
T  33803305 actcttacccaataccttaatgcaatgggtttatgggtcctcttacttatatggtgttcaacctttactattttatccgatgtgggacatataactcaca 33803404  T
Q  117 cttgtacacaaca 129  Q
     ||| ||||||||    
T  33803405 attgcacacaaca 33803417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 52634780 - 52634669
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||||||||||| || |||||||||||| || |||||||||||| | ||||||||||||||| || |||||||||||    
T  52634780 actcttacccaaaaccttaaggcaatgggtttatgggt-ctcttacttataaggcgttcaacctttactgttttatccgatgtgggacatataactcaca 52634682  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  52634681 cttgtacacaaca 52634669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 29644634 - 29644744
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||| ||||||||||||| ||||||||||||||| ||||||||||||||| | ||| ||||||||||| || |||||||||||    
T  29644634 actcttacccaaaaccttaagacaatgggtttatgggttctcttacttataaggtgttcaacctttactctttaatccgatgtgggacatataactcaca 29644733  T
Q  117 cttgtacacaa 127  Q
    |||| ||||||    
T  29644734 cttgcacacaa 29644744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 32462953 - 32463066
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacc-tttattattttatccgatgtggaac-tataactcac 115  Q
    |||||||||||||| | |||||||||||||||||||||  ||||||||||| ||| ||||||| |||| | || |||||||||||| || ||||||||||    
T  32462953 actcttactcaaaaccttaaggcaatgggtttatgagtcttcttacttataaggtattcaaccttttactcttctatccgatgtgggacatataactcac 32463052  T
Q  116 acttgtacacaaca 129  Q
    ||||||||||||||    
T  32463053 acttgtacacaaca 32463066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 32589808 - 32589697
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||  |||||| || ||| |||||||    
T  32589808 actcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttattattttatcttatgtgggacatat-actcaca 32589710  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  32589709 cttgcacacaaca 32589697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 3135126 - 3135236
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||||||||| | || |||| |||||||||| ||||| ||||||||| |||||||||| |||| ||||||||||||||||| || |||||||  ||    
T  3135126 actcttactcaaaaccttatggcagtgggtttatgggttcttttacttataaggtgttcaacatttactattttatccgatgtgggacatataact--ca 3135223  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  3135224 cttgtacacaaca 3135236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 25739478 - 25739590
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| |  || |||||| ||||||| || |||||||||||||| |||||||| |||| ||||||||||||||||| || |||||||||||    
T  25739478 actcttacccaaaacctaaaagcaatgagtttatgggtcctcttacttatatgatgttcaacttttactattttatccgatgtgggacatataactcaca 25739577  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  25739578 cttgcacacaaca 25739590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 29644955 - 29645067
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||| ||||||||||||| || |||||||||||| |||||| |||||||| | ||||||||||||||| || ||||||| |||    
T  29644955 actcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgtttaacctttactcttttatccgatgtgggacatataacttaca 29645054  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  29645055 cttgcacacaaca 29645067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 37991030 - 37991142
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| ||||| | |||||| ||| ||||||  || |||||||||||| ||||||||||||||| |||||||||| ||||| ||  |||||||||||    
T  37991030 actcttacccaaaaccttaaggcgatgagtttataggtcctcttacttataaggtgttcaacctttactattttatccaatgtgagacatataactcaca 37991129  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  37991130 cttgtacacaaca 37991142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 53118028 - 53118139
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||||| ||||||||||||||| ||| | |||| ||||||| ||||||||||||||| | ||||||||||| |||||| |||||||||||    
T  53118028 actcttacccaaaatcttaaggcaatgggttt-tgaatcctctcacttataaggtgttcaacctttactcttttatccgatatggaacatataactcaca 53118126  T
Q  117 cttgtacacaaca 129  Q
    ||||  |||||||    
T  53118127 cttgcccacaaca 53118139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 54017869 - 54017981
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcaca 116  Q
    |||||||| ||||| | ||||||  | ||||||||||| |||||||||||| ||||||||||||||| | ||||||||||||| |||  |||||||||||    
T  54017869 actcttacccaaaaccttaaggcgttaggtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtaggacatataactcaca 54017968  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  54017969 cttgcacacaaca 54017981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 22304674 - 22304571
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||| ||||||| || |||||||||||| ||| ||||||||||| ||||||||||||||||| || |||| ||||||    
T  22304674 actcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtattcaacctttactattttatccgatgtgggacatatagctcaca 22304575  T
Q  117 cttg 120  Q
    ||||    
T  22304574 cttg 22304571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 41359820 - 41359926
Alignment:
Q  20 tcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaactataactcacactt 119  Q
    |||||| ||||| | |||||||||||||||||| || |||||||||||| ||| ||||||||||| |||| ||||||||||||    |||||||||||||    
T  41359820 tcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactattgtatccgatgtgg---gataactcacactt 41359916  T
Q  120 gtacacaaca 129  Q
    | ||||||||    
T  41359917 gcacacaaca 41359926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 12114615 - 12114727
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcaca 116  Q
    |||||||| ||||| | |||| ||||||||||||| || |||||||||||| ||||||||||||||| | || |||||||||| |||  ||||||| |||    
T  12114615 actcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgggatatataacttaca 12114714  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  12114715 cttgcacacaaca 12114727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 21832396 - 21832508
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||| ||| |||||||||| |||||||||||| ||||||||||||||| | || ||||| |||||| || |||||||||||    
T  21832396 actcttacccaaaaccttaaggctatgagtttatgagtcctcttacttataaggtgttcaacctttacttttctatccaatgtgggacatataactcaca 21832495  T
Q  117 cttgtacacaaca 129  Q
    |||| ||| ||||    
T  21832496 cttgcacataaca 21832508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 33362349 - 33362425
Alignment:
Q  21 cttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccga 97  Q
    ||||| ||||||| ||||| |||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||    
T  33362349 cttacccaaaatcttaaggaaatgggtttatgggtcctcttacttataaggtattcaacctttattattttatccga 33362425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 42342441 - 42342553
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||| |||||| |||||| || |||||||||||| |||||| |||||||| | ||||||| ||||||| || |||||||||||    
T  42342441 actcttacccaaaaccttaagacaatggatttatgggtcctcttacttataaggtgttgaacctttactcttttatcggatgtgggacatataactcaca 42342540  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  42342541 cttgcacacaaca 42342553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 45901802 - 45901706
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacc-tttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||||| ||| ||||||| || |||||||||||| ||||||||||| ||| || ||||||||||||||| || ||||||||||||||||||||||||    
T  45901802 taaggccatgagtttatgcgtcctcttacttataaggtgttcaacctttttttcttttatccgatgtgggacatataactcacacttgtacacaaca 45901706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 4823760 - 4823657
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| ||||||| |||||||||| ||||||| || ||| |||||||| |||||| ||| |||| |||||||||||||||| ||  |||||||||||    
T  4823760 actcttacccaaaatcttaaggcaatgagtttatgggtcctcctacttataaggtgtttaacttttactattttatccgatgtgagacttataactcaca 4823661  T
Q  117 cttg 120  Q
    ||||    
T  4823660 cttg 4823657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 39389175 - 39389072
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcaca 116  Q
    |||||||| ||||| | |||| ||||||||||||| || |||||| || || ||||||||||||||| ||||||||||||||| |||  |||||||||||    
T  39389175 actcttacccaaaaccttaagacaatgggtttatgggtcctcttagttttaaggtgttcaacctttactattttatccgatgtaggacatataactcaca 39389076  T
Q  117 cttg 120  Q
    ||||    
T  39389075 cttg 39389072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 25755477 - 25755387
Alignment:
Q  40 caatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaaca 129  Q
    |||||| ||||||||| |||||||||||| ||| ||||||||||| | ||||||| |||||| ||  ||||||||||||||||||||||||    
T  25755477 caatggatttatgagtcctcttacttataaggtattcaacctttactcttttatctgatgtgagacatataactcacacttgtacacaaca 25755387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 39935008 - 39935090
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt 100  Q
    ||||||||||||||   ||||||||||||||||||  | |||||||||||| ||||||||||||||| | |||||||||||||    
T  39935008 actcttactcaaaactttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactcttttatccgatgt 39935090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 50612534 - 50612608
Alignment:
Q  47 tttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttg 120  Q
    ||||||||| |||||||||||| ||||||||| ||||| ||||||||||||||||| || |||||||||||||||    
T  50612534 tttatgagtcctcttacttataaggtgttcaatctttactattttatccgatgtgggacatataactcacacttg 50612608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 8328009 - 8327897
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||||| |  ||||||| ||||||||||||||| | | |||| |||||| | ||||||||||||||| || |||||||||||    
T  8328009 actcttacccaaaaccttaaggcattacgtttatgggttctcttacttataagatattcatcctttactcttttatccgatgtgggacatataactcaca 8327910  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  8327909 cttgcacacaaca 8327897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 15773297 - 15773185
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| |||||   |||||||||| | |||||||| |||||||||||| | |||||||| |||| | |||||| |||||||| || |||||||||||    
T  15773297 actcttacccaaaactttaaggcaatgagcttatgagtcctcttacttataagatgttcaacttttactcttttattcgatgtgggacatataactcaca 15773198  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  15773197 cttgcacacaaca 15773185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 42342143 - 42342255
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||| |||||||||| |||||||||||| ||  || ||| |||| | |||||||||||||||||| ||| | |||||    
T  42342143 actcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggcattgaacatttactcttttatccgatgtggaacatatgaatcaca 42342242  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  42342243 cttgcacacaaca 42342255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 1634367 - 1634477
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacc-tttattattttatccgatgtggaac-tataactcac 115  Q
    |||||||| ||||| | |||| ||||||||||||| || ||||||||||||  ||||| |||| |||||| || |||||||||||| || ||||||||||    
T  1634367 actcttacccaaaaccttaagccaatgggtttatgggtcctcttacttataatgtgtttaaccttttatttttctatccgatgtgggacatataactcac 1634466  T
Q  116 acttgtacaca 126  Q
    ||||| |||||    
T  1634467 acttgcacaca 1634477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 33175747 - 33175829
Alignment:
Q  48 ttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaaca 129  Q
    ||||| ||||||||||||||| ||||||||||||||| | || |||| |||||| ||  ||||||||||||||||||||||||    
T  33175747 ttatgggttctcttacttataaggtgttcaacctttacttttctatctgatgtgagacatataactcacacttgtacacaaca 33175829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 51886645 - 51886563
Alignment:
Q  39 gcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttg 120  Q
    |||||| ||||||| || |||||||||||||| ||||||||||||| |||||||| ||||||| ||  |||||||||||||||    
T  51886645 gcaatgagtttatgggtcctcttacttatatgatgttcaacctttactattttattcgatgtgagacatataactcacacttg 51886563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 9240243 - 9240142
Alignment:
Q  29 aaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaa 127  Q
    ||||| ||||| ||||| |||||| || |||||||||||| |||||||| | |||| |  | ||||||||||||||| ||||||||||||||| ||||||    
T  9240243 aaatcttaaggtaatggatttatgggtcctcttacttataaggtgttcagcttttacttctctatccgatgtggaacatataactcacacttgcacacaa 9240144  T
Q  128 ca 129  Q
    ||    
T  9240143 ca 9240142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 15772959 - 15772851
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||  ||||| | ||| |||||| ||||||| || |||||||||||| |||||||||| |||| | ||||||||||| ||| || |||||||||||    
T  15772959 actcttatccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacatttactcttttatccgatatgggacatataactcaca 15772860  T
Q  117 cttgtacac 125  Q
    |||| ||||    
T  15772859 cttgcacac 15772851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 49336764 - 49336852
Alignment:
Q  42 atgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaaca 129  Q
    ||||||||||| || |||||||||||| |||| |||||||||| | || ||||||||||| ||  | ||||||||||||||||||||||    
T  49336764 atgggtttatgggtcctcttacttataaggtggtcaacctttacttttctatccgatgtgagacatgtaactcacacttgtacacaaca 49336852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 11661601 - 11661531
Alignment:
Q  57 ctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacaca 126  Q
    |||||||||||| | |||| |||| ||| ||||||||||||||||| || |||||||||||||||||||||    
T  11661601 ctcttacttataagatgtttaaccgttactattttatccgatgtgggacatataactcacacttgtacaca 11661531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 47964968 - 47965082
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||||| |||||||||||| |||||||  |||| ||||||||  |||| |||||  | | || ||||||||||  ||| |||||||||||    
T  47964968 actcttacccaaaatcttaaggcaatgggcttatgagccctctcacttatataatgtttaacctccacttttctatccgatgtaaaacatataactcaca 47965067  T
Q  117 cttgtacacaacagt 131  Q
    |||| ||||||||||    
T  47965068 cttgcacacaacagt 47965082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 31190083 - 31190010
Alignment:
Q  57 ctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||| ||||||| ||||||||||||||| | ||||||||||||||| || ||| ||||||||||| ||||||||    
T  31190083 ctctaacttataaggtgttcaacctttactcttttatccgatgtgggacatatcactcacacttgcacacaaca 31190010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 39914357 - 39914245
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||  ||||||  ||||||| | |||||||| || |||||| ||||| |||||||||||| || | ||||||| |||||| ||  |||||||||||    
T  39914357 actcttatccaaaatattaaggcattaggtttatgggtcctcttatttataaggtgttcaacctctactgttttatctgatgtgagacatataactcaca 39914258  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  39914257 cttgcacacaaca 39914245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 42584875 - 42584959
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtgg 102  Q
    |||||| ||||||||| |||| |||| ||||||||  | |||||||||||| ||||||||| ||||| | || ||||||||||||    
T  42584875 actctttctcaaaatcttaagacaattggtttatggatcctcttacttataaggtgttcaatctttactcttctatccgatgtgg 42584959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 43346703 - 43346643
Alignment:
Q  70 ggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    ||||||||||||||| ||||||||||||||||| || || |||||||||||| ||||||||    
T  43346703 ggtgttcaacctttactattttatccgatgtgggacatacaactcacacttgcacacaaca 43346643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 54018251 - 54018363
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatg-tggaactataactcaca 116  Q
    |||||||| ||||| | ||||||  | |||||||| || |||||||||||| ||||||||| ||||| | ||||||||||||  |||  |||||||||||    
T  54018251 actcttacccaaaaccttaaggcgttaggtttatgggtcctcttacttataaggtgttcaatctttactcttttatccgatgcaggacatataactcaca 54018350  T
Q  117 cttgtacacaaca 129  Q
    |||| ||| ||||    
T  54018351 cttgcacataaca 54018363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 22304299 - 22304248
Alignment:
Q  70 ggtgttcaacctttattattttatccgatgtggaac-tataactcacacttg 120  Q
    ||||||||||||||| ||||||||||||||||| || |||||||||||||||    
T  22304299 ggtgttcaacctttactattttatccgatgtgggacatataactcacacttg 22304248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 44160614 - 44160709
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||| |||||||||||||  | |||||| ||||| ||||||||||||||||| |||||||| || || ||| ||||||| ||||||| | ||||||    
T  44160614 taagacaatgggtttatggatcctcttatttataaggtgttcaacctttattgttttatccaatatgaaacatataactgacacttgcatacaaca 44160709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 22304008 - 22304113
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||  ||||| | |||||||||||||||||| || | |||||||||| |       ||||||| ||||||||| ||||||| || |||||||||||    
T  22304008 actcttatccaaaaccttaaggcaatgggtttatgggtccgcttacttataag-------acctttactattttatctgatgtgggacatataactcaca 22304100  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  22304101 cttgtacacaaca 22304113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 7767384 - 7767469
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacactt 119  Q
    |||| |||||||||||||||| |||||| |||||  |||| ||||||||| | || |||||||||||| || ||||||||| ||||    
T  7767384 taagacaatgggtttatgagtcctcttagttataaagtgtccaacctttacttttctatccgatgtgggacatataactcagactt 7767469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 32462651 - 32462724
Alignment:
Q  58 tcttacttatatggtgttcaaccttt-attattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    ||||||||||| |||||||||||||| | | ||| || |||||||| || ||||||||||||||||||||||||    
T  32462651 tcttacttataaggtgttcaaccttttactctttcattcgatgtgggacatataactcacacttgtacacaaca 32462724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 37726570 - 37726506
Alignment:
Q  57 ctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttg 120  Q
    |||||||||||| ||| |||||| |||| |||||||||||||||| ||  |||||||||||||||    
T  37726570 ctcttacttataaggtattcaacatttactattttatccgatgtgagacatataactcacacttg 37726506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 45395706 - 45395818
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcaca 116  Q
    |||||||| |||||   |||| |||||||||||||  | ||||||||||||  ||||| |||||||| | |||||| |||||| |||  ||||||| |||    
T  45395706 actcttacccaaaacattaagacaatgggtttatggatcctcttacttataacgtgtttaacctttactcttttattcgatgtgggatatataacttaca 45395805  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  45395806 cttgcacacaaca 45395818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 102
Target Start/End: Complemental strand, 11662039 - 11661972
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtgg 102  Q
    ||||||||| ||||||||||  |||| |||| || ||||||||||||||| | |||||||| ||||||    
T  11662039 taaggcaattggtttatgaggcctctcacttttaaggtgttcaacctttactcttttatccaatgtgg 11661972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 17731957 - 17732008
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatat 69  Q
    |||||||||||||| | |||||||||||||||||| |||| ||| |||||||    
T  17731957 actcttactcaaaaccttaaggcaatgggtttatgggttccctttcttatat 17732008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 19033188 - 19033239
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatat 69  Q
    |||||||||||||| | |||||||||||||||||| |||| ||| |||||||    
T  19033188 actcttactcaaaaccttaaggcaatgggtttatgggttccctttcttatat 19033239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 46546378 - 46546441
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacct 81  Q
    |||||||| ||||| | ||||||||||||||||||  |||||| |||||||  |||||||||||    
T  46546378 actcttacacaaaaccttaaggcaatgggtttatggattctctaacttataaagtgttcaacct 46546441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 53577415 - 53577357
Alignment:
Q  72 tgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaaca 129  Q
    ||||||||||||| | |||||||||||||| ||  ||||||||||||||| ||||||||    
T  53577415 tgttcaacctttactgttttatccgatgtgtgacatataactcacacttgcacacaaca 53577357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 3135566 - 3135626
Alignment:
Q  70 ggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||||||||| |||| | ||||||| || |||| || ||||||||||||||||||||||||    
T  3135566 ggtgttcaacttttactcttttatctgaggtgggacatataactcacacttgtacacaaca 3135626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 15880368 - 15880256
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||||||||||| || |||||||||||| ||||||||||||||| | |||||||||||||||||| |||||||||||    
T  15880368 actcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtggaacatataactcaca 15880269  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  15880268 cttgtacacaaca 15880256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 16542554 - 16542442
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||||||||||| |||||||||| |||||| ||| |||||| ||||| ||||||||||||||| ||||||||||||||||| || |||||||||||    
T  16542554 actcttactcaaaatcttaaggcaatgagtttataagtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacttataactcaca 16542455  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  16542454 cttgcacacaaca 16542442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 36178658 - 36178761
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||||||||||| || |||||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||||    
T  36178658 actcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcaca 36178757  T
Q  117 cttg 120  Q
    ||||    
T  36178758 cttg 36178761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 6421490 - 6421378
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| |  ||||||||| |||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||| || |||||||||||    
T  6421490 actcttacccaaaacctcaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcaca 6421391  T
Q  117 cttgtacacaaca 129  Q
    ||||| |||||||    
T  6421390 cttgtgcacaaca 6421378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 36178224 - 36178308
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtgg 102  Q
    |||||||| ||||||| |||||||||||||||||| |||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  36178224 actcttacccaaaatcttaaggcaatgggtttatgggttcccttacttataaggtgttcaacctttactattttatccgatgtgg 36178308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 14745720 - 14745823
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||||||||||| || |||||||||||| ||||||||||||||| |||||||||| |||||| || |||||||||||    
T  14745720 actcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataactcaca 14745819  T
Q  117 cttg 120  Q
    ||||    
T  14745820 cttg 14745823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 37106293 - 37106190
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||| |||||||||||| || |||||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||||    
T  37106293 actcttacccaaaaccttaaggaaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcaca 37106194  T
Q  117 cttg 120  Q
    ||||    
T  37106193 cttg 37106190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 38796671 - 38796785
Alignment:
Q  16 atactcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactca 114  Q
    |||||||||| ||||| | ||||||| | |||||||| || |||||||||||| ||||||||||||||||| ||||||| ||||||| || |||||||||    
T  38796671 atactcttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacctttattgttttatcagatgtgggacatataactca 38796770  T
Q  115 cacttgtacacaaca 129  Q
    |||||| ||||||||    
T  38796771 cacttgcacacaaca 38796785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 5543051 - 5543154
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||||| ||||||||| ||||||||  | |||||||||||| ||||||||||||||| ||||||||| ||||||| || |||||||||||    
T  5543051 actcttacccaaaatcttaaggcaataggtttatggatcctcttacttataaggtgttcaacctttactattttatcggatgtgggacatataactcaca 5543150  T
Q  117 cttg 120  Q
    ||||    
T  5543151 cttg 5543154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 31899496 - 31899591
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||||||||| ||||||| || |||||||||||| |||||||||| |||| |||||||||||||||||||| ||||||||||||||  ||||||||    
T  31899496 taaggcaatgagtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactcacactttcacacaaca 31899591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 37106029 - 37105926
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||||| |||||||||| ||||||| || | |||||||||| ||||||||||||||| |||||||| |||||||| || |||||||||||    
T  37106029 actcttacccaaaatcttaaggcaatgagtttatgggtccccttacttataaggtgttcaacctttactattttattcgatgtgggacatataactcaca 37105930  T
Q  117 cttg 120  Q
    ||||    
T  37105929 cttg 37105926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 35580777 - 35580886
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||||||||||| || |||| ||||||| |||||||||| |||||| ||||||||||||||| || |||||||||||    
T  35580777 actcttacccaaaaccttaaggcaatgggtttatg-gtcctctcacttataaggtgttcaacatttattgttttatccgatgtgggacatataactcaca 35580875  T
Q  117 cttgtacacaa 127  Q
    |||| ||||||    
T  35580876 cttgcacacaa 35580886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 28531367 - 28531479
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||||| |||||||||| ||||||| |  |||||||||||| ||||||||||||||  | || |||||||||||| || |||||||||||    
T  28531367 actcttacccaaaatcttaaggcaatgagtttatgggacctcttacttataaggtgttcaacctttgcttttctatccgatgtgggacatataactcaca 28531466  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  28531467 cttgcacacaaca 28531479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 40679682 - 40679794
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||||| |||||| ||||||||||| ||||||||||||||| ||||||||||| ||| | || |||||||| ||| || |||||||||||    
T  40679682 actcttacccaaaatcttaaggcgatgggtttatgggttctcttacttataaggtgttcaacccttacttttctatccgatatgggacatataactcaca 40679781  T
Q  117 cttgtacacaaca 129  Q
     ||| ||||||||    
T  40679782 tttgcacacaaca 40679794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 36178322 - 36178425
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||| |||||||||||||||| | |||||||||| ||||||| ||||||| |||||||||||| |||| || |||||||||||    
T  36178322 actcttacccaaaaccttaagacaatgggtttatgagtccccttacttataaggtgttccacctttactattttatccgaagtgggacatataactcaca 36178421  T
Q  117 cttg 120  Q
    ||||    
T  36178422 cttg 36178425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 41283528 - 41283631
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    ||||||||  |||| | |||||||||| ||||||| || |||||||||||| ||||||||||||||| ||||||||||||| ||| || |||||||||||    
T  41283528 actcttacctaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatatgggacatataactcaca 41283627  T
Q  117 cttg 120  Q
    ||||    
T  41283628 cttg 41283631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 962703 - 962591
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||| ||||||||||||| || |||| ||||||| ||||||||||||||| | || |||||||||||| || |||||||||||    
T  962703 actcttacccaaaaccttaagacaatgggtttatgggtcctctcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactcaca 962604  T
Q  117 cttgtacacaaca 129  Q
    |||| | ||||||    
T  962603 cttgcatacaaca 962591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 42514754 - 42514642
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcaca 116  Q
    |||||||| ||||||| |||||| ||||||||||| || |||||||||||| ||||||||||||||| | || |||| ||||| |||  |||||||||||    
T  42514754 actcttacccaaaatcttaaggcgatgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatctgatgtaggacatataactcaca 42514655  T
Q  117 cttgtacacaaca 129  Q
    |||| | ||||||    
T  42514654 cttgcatacaaca 42514642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 5542678 - 5542781
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    ||||||||  |||| | ||||||||| |||||||| || |||||||||||| ||||||||||||||| |||||||| |||| ||| || |||||||||||    
T  5542678 actcttaccaaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattttattcgatatgggacatataactcaca 5542777  T
Q  117 cttg 120  Q
    ||||    
T  5542778 cttg 5542781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 28254290 - 28254402
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||| ||||||| || |||||||||||| | ||||||||||||| | || |||||||||||| || ||||| |||||    
T  28254290 actcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtgggacatataagtcaca 28254389  T
Q  117 cttgtacacaaca 129  Q
    || | ||||||||    
T  28254390 ctggcacacaaca 28254402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 36005937 - 36006044
Alignment:
Q  22 ttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttg 120  Q
    |||| ||||| | |||||||||| ||||||| || |||||||||||| |||||||||| |||| | || ||| |||||||| || |||||||||||||||    
T  36005937 ttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacttttact-ttctattcgatgtgggacatataactcacacttg 36006035  T
Q  121 tacacaaca 129  Q
    |||||||||    
T  36006036 tacacaaca 36006044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 37895114 - 37895226
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||||||||||| ||||| |||||| || ||| |||||| |||||| || |||||||||||| || ||||||||| |    
T  37895114 actcttacccaaaaccttaaggcaatgggtttatgtgttcttttacttttaaggttttcaacttttatttttctatccgatgtgggacatataactcaaa 37895213  T
Q  117 cttgtacacaaca 129  Q
    || | ||||||||    
T  37895214 ctcgcacacaaca 37895226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 6713060 - 6712969
Alignment:
Q  39 gcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaaca 129  Q
    ||||| |||||||| || |||||||||||| |||||||||| |||| | |||||||||||||| ||  ||||||||||||||||| ||||||    
T  6713060 gcaataggtttatgggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgagacatataactcacacttgtatacaaca 6712969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 15511548 - 15511631
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg 101  Q
    |||||||| ||||||| |||| ||||||||||||| || ||||||||||||  |||||||||||||| | ||||||||| ||||    
T  15511548 actcttacccaaaatcttaagacaatgggtttatgggtcctcttacttataacgtgttcaacctttactcttttatccgttgtg 15511631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 40733595 - 40733512
Alignment:
Q  45 ggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaa 127  Q
    |||||||| || |||||||||||| |||||||||| |||| | ||||||| ||||||| || ||||||||||||||||||||||    
T  40733595 ggtttatgggtcctcttacttataaggtgttcaacatttacttttttatctgatgtgggacatataactcacacttgtacacaa 40733512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 33731755 - 33731653
Alignment:
Q  16 atactcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactca 114  Q
    |||||||||| ||||| | ||||||||| ||||||||  | |||||||||||| |||| |||||||||| | |||||||||||||| ||  |||||||||    
T  33731755 atactcttacccaaaaccttaaggcaataggtttatggatcctcttacttataaggtgctcaacctttactcttttatccgatgtgagatatataactca 33731656  T
Q  115 cac 117  Q
    |||    
T  33731655 cac 33731653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 38796310 - 38796383
Alignment:
Q  57 ctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||||||||||| |||||||||| |||| | ||||||||||||||| || ||||||||||||||| ||||||||    
T  38796310 ctcttacttataaggtgttcaacatttactgttttatccgatgtgggacatataactcacacttgcacacaaca 38796383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 1769969 - 1769889
Alignment:
Q  46 gtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacac 125  Q
    |||||||||| |||||||||||| |||||||||| |||| | |||||||||||||| ||  ||||||||||||||| ||||    
T  1769969 gtttatgagtcctcttacttataaggtgttcaacttttactcttttatccgatgtgtgacatataactcacacttgcacac 1769889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 36785668 - 36785728
Alignment:
Q  70 ggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    ||||||||||||||| ||||||||||||||||| || ||||||||||||||| ||||||||    
T  36785668 ggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaaca 36785728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 12529098 - 12529193
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcacacttgtacacaaca 129  Q
    |||||||||| |||||||||| |||||||||||| ||||||||| ||||| | ||||||  ||||| |||  ||||||||||||||| | ||||||    
T  12529098 taaggcaatgagtttatgagtcctcttacttatacggtgttcaatctttactgttttatttgatgtaggacatataactcacacttgcatacaaca 12529193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 14745347 - 14745446
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||||||||||| || ||| |||||| | | ||||||||| ||| |||||||| |||||||| || |||||||||||    
T  14745347 actcttacccaaaaccttaaggcaatgggtttatgggtcctcatacttacaagatgttcaaccattactattttattcgatgtgggacatataactcaca 14745446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 31468803 - 31468911
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||| ||||||| || ||||||    || | | ||||||||||| ||||||||||||||||| || |||||||||||    
T  31468803 actcttacccaaaaccttaaggcaatgagtttatgggtcctctta----taagatattcaacctttactattttatccgatgtgggacatataactcaca 31468898  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  31468899 cttgcacacaaca 31468911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 7598684 - 7598606
Alignment:
Q  48 ttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacac 125  Q
    ||||| || |||||||||||| ||||||||||||||| | ||||||| ||||||| || ||||||||||||||| ||||    
T  7598684 ttatgggtcctcttacttataaggtgttcaacctttacttttttatctgatgtgggacatataactcacacttgcacac 7598606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 37632674 - 37632764
Alignment:
Q  42 atgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaacagt 131  Q
    ||||||||||| || ||||||||||||   |||  |||||||| ||||||||||||||| | || ||||||||||||||| ||||||||||    
T  37632674 atgggtttatgggtcctcttacttataaaatgtcaaacctttactattttatccgatgtaggacatataactcacacttgcacacaacagt 37632764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 40733958 - 40733878
Alignment:
Q  48 ttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaa 127  Q
    |||||||  |||||||||||| |||||| || ||||| | |||||| |||||||| || ||||||||||||||||||||||    
T  40733958 ttatgagccctcttacttataaggtgttaaatctttactcttttattcgatgtgggacatataactcacacttgtacacaa 40733878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 28254182 - 28254248
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg 101  Q
    |||||||| | |||||||||| ||||||||||||  |||||||||||||| | || |||||||||||    
T  28254182 taaggcaaagtgtttatgagtcctcttacttataaagtgttcaacctttacttttctatccgatgtg 28254248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 129
Target Start/End: Complemental strand, 5367520 - 5367448
Alignment:
Q  58 tcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    ||||||||||| ||||||||||||||  | ||||||||||| ||| || ||||  ||||||||||||||||||    
T  5367520 tcttacttataaggtgttcaacctttgctcttttatccgatctgggacatatatatcacacttgtacacaaca 5367448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 6422215 - 6422131
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtgg 102  Q
    ||||||||  |||| | |||||| ||||||||||| || |||||| |||||  |||||||||||||| | ||||||| |||||||    
T  6422215 actcttacctaaaaccttaaggctatgggtttatgggtcctcttaattataatgtgttcaacctttacttttttatctgatgtgg 6422131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 33561504 - 33561616
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||| ||||| ||||||| || |||| |||||||  ||||| |||||  | | || |||| |||||||||| |||||||||||    
T  33561504 actcttacccaaaaccttaagacaatgagtttatgggtcctctcacttataaagtgtttaacctccacttttctatctgatgtggaacatataactcaca 33561603  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  33561604 cttgcacacaaca 33561616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 33953824 - 33953936
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||||  ||||||||  |||||||| || |||| |||||||| |||||||||||  | | || |||| ||||||| || |||||||||||    
T  33953824 actcttacccaaaattttaaggcaacaggtttatgggtcctctcacttatatagtgttcaacctccacttttctatctgatgtgggacttataactcaca 33953923  T
Q  117 cttgtacacaaca 129  Q
     ||| ||||||||    
T  33953924 tttgcacacaaca 33953936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 6421352 - 6421297
Alignment:
Q  75 tcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||||||||| | ||||||||||||||| || ||||||| ||||||||||||||||    
T  6421352 tcaacctttactcttttatccgatgtgggacatataacttacacttgtacacaaca 6421297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 29676961 - 29676896
Alignment:
Q  65 tatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||| |||||| |||||||| | ||||||||||||||| || |||||||||||| || ||||||||    
T  29676961 tataaggtgttaaacctttactcttttatccgatgtgggacatataactcacacctgcacacaaca 29676896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 31259669 - 31259750
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatg 99  Q
    |||||||| ||||| | |||||  || |||||||| ||  ||||||||||| |||||| |||||||| | ||||||||||||    
T  31259669 actcttacccaaaaccttaaggtgataggtttatgggtcatcttacttataaggtgttgaacctttactcttttatccgatg 31259750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 37894754 - 37894855
Alignment:
Q  27 caaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacac 125  Q
    ||||||| ||||||||||| |||||||||  ||||||||||| ||| || | |||||| | || ||| | |||||| || ||||||||||| ||| ||||    
T  37894754 caaaatcttaaggcaatggatttatgagtcttcttacttataaggtttttagcctttacttttctattcaatgtgggacatataactcacatttgcacac 37894853  T
Q  126 aa 127  Q
    ||    
T  37894854 aa 37894855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 40163466 - 40163510
Alignment:
Q  58 tcttacttatatggtgttcaacctttattattttatccgatgtgg 102  Q
    ||||||||||| ||||||||||||||| | || ||||||||||||    
T  40163466 tcttacttataaggtgttcaacctttacttttctatccgatgtgg 40163510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 6e-30; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 26074717 - 26074607
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||||||||||| || |||||||||||| ||||||||||||||| | ||||||||||| |||||| |||||||||||    
T  26074717 actcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatatggaacatataactcaca 26074618  T
Q  117 cttgtacacaa 127  Q
    |||||||||||    
T  26074617 cttgtacacaa 26074607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 18603173 - 18603276
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||||||||||| || |||||||||||| ||||||||||||||| ||||||||| ||||||| || |||||||||||    
T  18603173 actcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcaca 18603272  T
Q  117 cttg 120  Q
    ||||    
T  18603273 cttg 18603276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 32487498 - 32487396
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||||||||||| || |||||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||||    
T  32487498 actcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata-ggtgttcaacctttactattttatccgatgtgggacatataactcaca 32487400  T
Q  117 cttg 120  Q
    ||||    
T  32487399 cttg 32487396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 6500555 - 6500453
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaactataactcacac 117  Q
    |||||||| ||||| | ||||||||||||||||   || |||||||||||| ||||||||||||||| ||||||||||||||||||  ||||||||||||    
T  6500555 actcttacccaaaaccttaaggcaatgggtttaaaggtcctcttacttataaggtgttcaacctttactattttatccgatgtggacatataactcacac 6500456  T
Q  118 ttg 120  Q
    |||    
T  6500455 ttg 6500453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 11417030 - 11417128
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcac 115  Q
    |||||||| ||||| | ||||||||||||||||||  | |||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  11417030 actcttacacaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatataactcac 11417128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 13415813 - 13415926
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||| ||| |||||||| || |||||||||||| ||||||||||||||| || |||||||||||||| || |||||||||||    
T  13415813 actcttacccaaaaccttaaggtaataggtttatgggtcctcttacttataaggtgttcaacctttactaatttatccgatgtgggacatataactcaca 13415912  T
Q  117 cttgtacacaacag 130  Q
    |||| |||||||||    
T  13415913 cttgcacacaacag 13415926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 40296368 - 40296477
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| |  ||||||||||||||||| || |||||||||||| ||||||||||||||  ||||||||||||||||| || |||||||||||    
T  40296368 actcttacccaaaacctcaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttctattttatccgatgtgggacatataactcaca 40296467  T
Q  117 cttgtacaca 126  Q
    |||| |||||    
T  40296468 cttgcacaca 40296477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 26075219 - 26075327
Alignment:
Q  22 ttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttg 120  Q
    |||| ||||| | |||||||||||||||||| || |||||||||||| ||||||||||||||| | |||||||||||||| ||  ||||| |||||||||    
T  26075219 ttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgagacatataaatcacacttg 26075318  T
Q  121 tacacaaca 129  Q
    |||||||||    
T  26075319 tacacaaca 26075327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 42405649 - 42405761
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatg-tggaactataactcaca 116  Q
    |||||||| ||||| | ||||||| | ||||||||||| || |||||| || ||||||||||||||| |||||||||||||| ||||  |||||||||||    
T  42405649 actcttacccaaaaccttaaggcattaggtttatgagtccttttacttgtaaggtgttcaacctttactattttatccgatgttggacatataactcaca 42405748  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  42405749 cttgtacacaaca 42405761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 41170739 - 41170640
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||||||||||| || |||||||||||| | ||||||||||||| ||||||||||||||||| || |||||||||||    
T  41170739 actcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcaca 41170640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 3295398 - 3295508
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||||||| |||||||| || |||||||||||| ||||||||||||||| |||||||||||||||||||| ||| |||||||    
T  3295398 actcttac-caaaaccttaaggcaattggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatat-actcaca 3295495  T
Q  117 cttgtacacaaca 129  Q
    |||  ||||||||    
T  3295496 cttccacacaaca 3295508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 6224301 - 6224189
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    ||||||||  |||| | |||||| ||| ||||||| || |||||||||||| ||||||||||||||| | |||||||||| |||| || |||||||||||    
T  6224301 actcttaccaaaaaccttaaggcgatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgaagtgggacatataactcaca 6224202  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  6224201 cttgtacacaaca 6224189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 12662705 - 12662817
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||| |||||| |||||| ||| |||||||||||   ||||||||||||| ||||||||||||||||| || |||||||||||    
T  12662705 actcttacccaaaaacttaagacaatggatttatgggttttcttacttataaaatgttcaacctttactattttatccgatgtgggacatataactcaca 12662804  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  12662805 cttgcacacaaca 12662817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 26074839 - 26074947
Alignment:
Q  22 ttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttg 120  Q
    |||| ||||| | |||| |||| |||||||| || ||| ||||||||| |||||||||||||| | ||||||||||||||| || |||||||||||||||    
T  26074839 ttacccaaaaccttaagacaataggtttatgggtcctcctacttatattgtgttcaacctttactcttttatccgatgtgggacatataactcacacttg 26074938  T
Q  121 tacacaaca 129  Q
    |||||||||    
T  26074939 tacacaaca 26074947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 9498707 - 9498790
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg 101  Q
    |||||||| ||||||| |||||||||||||||||| || |||||||||||| ||||||||||||||| |||| |||| ||||||    
T  9498707 actcttacccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattctatctgatgtg 9498790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 6500927 - 6500825
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaactataactcacac 117  Q
    |||||||  ||||| | |||||||||| ||||||| || || ||| ||||| ||||||||||||||| ||||||||||||||||||  ||||||||||||    
T  6500927 actcttatccaaaaccttaaggcaatgagtttatgggtccttttatttataaggtgttcaacctttactattttatccgatgtggacatataactcacac 6500828  T
Q  118 ttg 120  Q
    |||    
T  6500827 ttg 6500825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 27502099 - 27502192
Alignment:
Q  28 aaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttg 120  Q
    |||||| ||||||||| |||||||| || |||||||||||| |||||| |||||||| |||||||||| |||||| || |||||||||||||||    
T  27502099 aaaatcttaaggcaataggtttatgggtcctcttacttataaggtgtttaacctttactattttatccaatgtgggacatataactcacacttg 27502192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 299594 - 299482
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||| ||| ||||||| ||  ||||||||||| ||||||||||||||| | ||||||||||||||| || |||||||||||    
T  299594 actcttacacaaaaccttaaggctatgagtttatgggtcatcttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcaca 299495  T
Q  117 cttgtacacaaca 129  Q
    ||||  |||||||    
T  299494 cttgcgcacaaca 299482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 15370204 - 15370092
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||||  ||| |||||| || |||||||||||| | ||||||||||||| |||||||| |||||||| || |||||||||||    
T  15370204 actcttacccaaaaccttaaggctgtggatttatgggtcctcttacttataagatgttcaacctttactattttattcgatgtgggacatataactcaca 15370105  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  15370104 cttgcacacaaca 15370092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 26074199 - 26074311
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| ||||| | |||||||||||||| ||| || ||||||| |||  ||||||||||||||| | |||||||||||||| ||  |||||||||||    
T  26074199 actcttacccaaaaccttaaggcaatgggttcatgggtcctcttacatatgaggtgttcaacctttacttttttatccgatgtgtgacatataactcaca 26074298  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  26074299 cttgcacacaaca 26074311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 41632887 - 41632775
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| ||||||| ||| ||| |||||||||| || |||||||||||| ||||||||||||||| | || ||||||||||| ||  ||||||| |||    
T  41632887 actcttacccaaaatcttaaagcattgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataacttaca 41632788  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  41632787 cttgcacacaaca 41632775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 3295086 - 3295176
Alignment:
Q  36 aaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacaca 126  Q
    ||||||||||||||||| ||  ||||||||||| ||||||||||||||| ||||||||||||||||| || ||| ||||||||||| |||||    
T  3295086 aaggcaatgggtttatgggtcttcttacttataaggtgttcaacctttactattttatccgatgtgggacatat-actcacacttgcacaca 3295176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 25328040 - 25327928
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcaca 116  Q
    |||||||| ||||| | ||||||| | |||||||| || |||||||||||| |||||||||| |||| | ||||||||||||| |||  |||||||||||    
T  25328040 actcttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacttttactgttttatccgatgtaggacatataactcaca 25327941  T
Q  117 cttgtacacaaca 129  Q
    |||  ||||||||    
T  25327940 cttagacacaaca 25327928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 29549308 - 29549411
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||  ||||| | ||||| |||| ||||||| ||  |||||||||||||||||||| |||||| ||||||||| ||| |||||| |||||||||||    
T  29549308 actcttatccaaaaccttaaggtaatgtgtttatgggtcttcttacttatatggtgttcatcctttactattttatctgatatggaacatataactcaca 29549407  T
Q  117 cttg 120  Q
    ||||    
T  29549408 cttg 29549411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 42508700 - 42508605
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcacacttgtacacaaca 129  Q
    ||||||||||||||||||||| |||||||||||  | |||| |||||||| | || |||||||||| |||  ||||| ||||||||||||||||||    
T  42508700 taaggcaatgggtttatgagtcctcttacttattagatgtttaacctttacttttctatccgatgtgggatatataattcacacttgtacacaaca 42508605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 35150107 - 35150002
Alignment:
Q  22 ttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttg 120  Q
    |||| ||||| | |||| |||||| |||||| || |||||||||||| ||||||||||||| | | ||||||||||||||| || |||||||||||||||    
T  35150107 ttacccaaaaccttaagacaatggatttatgggt-ctcttacttataaggtgttcaaccttgactcttttatccgatgtgggacatataactcacacttg 35150009  T
Q  121 tacacaa 127  Q
     ||||||    
T  35150008 cacacaa 35150002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 36492288 - 36492382
Alignment:
Q  36 aaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||| |||| ||||||  || |||||||||||| ||||||||||||||| | ||||||||||||||| || ||||||||||||||| | ||||||    
T  36492288 aaggtaatgtgtttattggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgcaaacaaca 36492382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 1028597 - 1028682
Alignment:
Q  45 ggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||||||| || ||||||||||||  ||||||| |||||| | || |||||||||||| || ||||||||||||||||||||||||    
T  1028597 ggtttatgggtcctcttacttataaagtgttcatcctttacttttctatccgatgtgggacatataactcacacttgtacacaaca 1028682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 7768913 - 7768852
Alignment:
Q  60 ttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcacacttg 120  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||  |||||||||||||||    
T  7768913 ttacttataaggtgttcaacctttattattttatccgatgtaggatatataactcacacttg 7768852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 24489259 - 24489369
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||||| |||||||||||||||||| ||  ||||||| ||| |||||| |||||||  | || |||| ||||||| || |||||||||||    
T  24489259 actcttacgcaaaatcttaaggcaatgggtttatgggt--tcttactaataaggtgtttaaccttttcttttctatctgatgtgggacatataactcaca 24489356  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  24489357 cttgaacacaaca 24489369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 36568620 - 36568733
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    ||||||||  |||| | |||||||||||||||| | ||  ||| ||||||| |||||||||| |||| | || |||||||||||| || |||||||||||    
T  36568620 actcttaccaaaaaccttaaggcaatgggtttacgggtcatctcacttataaggtgttcaacttttacttttctatccgatgtgggacatataactcaca 36568719  T
Q  117 cttgtacacaacag 130  Q
    |||| |||||||||    
T  36568720 cttgcacacaacag 36568733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 34753078 - 34753190
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||||||| |||||||| ||  ||||||||||| |||||||||| |||| | || ||||| |||||| || ||||||| |||    
T  34753078 actcttacccaaaaccttaaggcaatcggtttatgggtcttcttacttataaggtgttcaacttttacttttctatccaatgtgggacatataacttaca 34753177  T
Q  117 cttgtacacaaca 129  Q
     ||||||||||||    
T  34753178 tttgtacacaaca 34753190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 624301 - 624198
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| |  ||||| ||||||||||| ||  |||||||||||  |||||||||||||| |||||||| | |||||| || |||||||||||    
T  624301 actcttacccaaaacctcaaggctatgggtttatgggtcatcttacttataacgtgttcaacctttactattttatacaatgtgggacatataactcaca 624202  T
Q  117 cttg 120  Q
    ||||    
T  624201 cttg 624198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 5723880 - 5723947
Alignment:
Q  54 gttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttg 120  Q
    |||||||||| ||||  ||||||||| |||||||||||||||||||||| || |||||||||||||||    
T  5723880 gttctcttacatataatgtgttcaacttttattattttatccgatgtgggacatataactcacacttg 5723947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 301027 - 300954
Alignment:
Q  55 ttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaa 127  Q
    |||||||||||||| ||| ||||||||||| | ||||||| ||||||| || |||||| |||||||||||||||    
T  301027 ttctcttacttataaggtattcaacctttactgttttatctgatgtgggacatataacccacacttgtacacaa 300954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 33747876 - 33747792
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtgg 102  Q
    |||||||  ||||||| |||||||||| |||||||  | ||||||||||||  || || |||||||| |||||||||||||||||    
T  33747876 actcttatccaaaatcttaaggcaatgagtttatggatcctcttacttataaagtatttaacctttactattttatccgatgtgg 33747792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 15370507 - 15370428
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccga 97  Q
    |||||||| ||||| | |||||| ||||||||||| || |||||||||||| |||||||||| |||| | ||| ||||||    
T  15370507 actcttacgcaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaacatttactgtttcatccga 15370428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 26074398 - 26074320
Alignment:
Q  43 tgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttg 120  Q
    |||||||||| || |||||||||||| ||||||||| ||||| | || |||| ||||||| || |||||||||||||||    
T  26074398 tgggtttatgggtcctcttacttataaggtgttcaatctttagttttctatctgatgtgggacatataactcacacttg 26074320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 129
Target Start/End: Complemental strand, 39309764 - 39309677
Alignment:
Q  42 atgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    ||||||||||| || |||||| |||||  ||||||||| ||||   ||||||||||||||| || ||||||||| ||||||||||||||    
T  39309764 atgggtttatg-gtcctcttatttataatgtgttcaacatttacccttttatccgatgtgggacatataactcatacttgtacacaaca 39309677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 2411112 - 2411046
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaaccttta 84  Q
    |||||||||||||| | |||||||||  ||||||| ||||||||||||| | | |||||||| ||||    
T  2411112 actcttactcaaaaccttaaggcaataagtttatgggttctcttacttacaagatgttcaactttta 2411046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 26590963 - 26591029
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaaccttta 84  Q
    |||||||||||||| | ||||||| ||  ||||||  | |||||||||||| |||||||||||||||    
T  26590963 actcttactcaaaaccttaaggcattgaatttatggatcctcttacttataaggtgttcaaccttta 26591029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 31509710 - 31509616
Alignment:
Q  36 aaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaaca 129  Q
    ||||||||| |||||||||| |||| |||||||  ||| |||||||  | | || ||||||||||| ||  ||||||||||||||| ||||||||    
T  31509710 aaggcaatgagtttatgagtcctctcacttataaagtgctcaacctccacttttctatccgatgtgagacatataactcacacttgcacacaaca 31509616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 35167909 - 35168003
Alignment:
Q  36 aaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaaca 129  Q
    |||||||| | |||||| ||  || |||||||| ||||||||||||||| | ||||||| |||||| ||   |||||||| ||||||||||||||    
T  35167909 aaggcaatagatttatgggtcatcctacttataaggtgttcaacctttactcttttatctgatgtgagatacataactcatacttgtacacaaca 35168003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 129
Target Start/End: Complemental strand, 35914914 - 35914842
Alignment:
Q  58 tcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaaca 129  Q
    |||||||||||   ||||||||||||| | |||||||||||||| ||  ||||||||| |||| |||||||||    
T  35914914 tcttacttataaaatgttcaacctttactcttttatccgatgtgtgacatataactcatacttatacacaaca 35914842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 5462 - 5350
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||  ||||||| |||||||||||||||||| || |||||||||||| ||||||||||||||| | || ||||||||||||||| |||||||||||    
T  5462 actcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactgttctatccgatgtggaacatataactcaca 5363  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  5362 cttgcacacaaca 5350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 5087 - 4975
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| ||||| |||||||||||| ||||||| ||  | ||||||||| | | || |||||||| | || | ||||||||| ||  ||||| |||||    
T  5087 actcttacccaaaaccataaggcaatgagtttatgggtctttttacttataagatattaaacctttactgttctctccgatgtgagacatataattcaca 4988  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  4987 cttgcacacaaca 4975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 3038343 - 3038455
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||||||||||| || || |||||||||  |||||||||||||| ||||||||||||||||| || |||||||||||    
T  3038343 actcttacccaaaaccttaaggcaatgggtttatgggtccttttacttataaagtgttcaacctttactattttatccgatgtgggacatataactcaca 3038442  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  3038443 cttgtacacaaca 3038455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 34834981 - 34834869
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||| ||||||||||  ||||||||||| |||||| |||||||| |||||||||| |||||| || |||||||||||    
T  34834981 actcttacccaaaaccttaaggcaatgagtttatgagtcatcttacttataaggtgtttaacctttactattttatccaatgtgggacatataactcaca 34834882  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  34834881 cttgtacacaaca 34834869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 1013924 - 1014027
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    ||||||||||||||   |||||||||||||||||  || |||||||||||| |||||||||| |||| |||||||||||||||||||| |||||||||||    
T  1013924 actcttactcaaaactctaaggcaatgggtttattggtcctcttacttatagggtgttcaacttttactattttatccgatgtggaacatataactcaca 1014023  T
Q  117 cttg 120  Q
    ||||    
T  1014024 cttg 1014027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 3669792 - 3669689
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||| |||||||||| |||||||||||| ||||||||||||||| ||||||||| ||||||| || |||||||||||    
T  3669792 actcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcaca 3669693  T
Q  117 cttg 120  Q
    ||||    
T  3669692 cttg 3669689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 30359714 - 30359602
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| ||||||| |||||  |||||||||||||| |||||||||||| |||||||||| |||| | ||||||| |||||| ||  |||||||||||    
T  30359714 actcttacccaaaatcttaaggttatgggtttatgagtcctcttacttataaggtgttcaacttttactcttttatctgatgtgagacatataactcaca 30359615  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  30359614 cttgtacacaaca 30359602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 33113420 - 33113532
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcaca 116  Q
    |||||||| ||||||| |||||||||| ||||||| || |||||||||||| |  |||||||||||| ||||||||||||||| |||  ||||||||| |    
T  33113420 actcttacccaaaatcttaaggcaatgagtttatgggtcctcttacttataagacgttcaacctttactattttatccgatgtaggacatataactcaaa 33113519  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  33113520 cttgtacacaaca 33113532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 45121967 - 45122066
Alignment:
Q  22 ttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttg 120  Q
    |||| ||||||| |||||||||| |||||||||| ||||||||||||  |||||||||||||| |||||||| |||||||| || |||||||||||||||    
T  45121967 ttacccaaaatcttaaggcaatgagtttatgagtcctcttacttataaagtgttcaacctttactattttatgcgatgtgggacatataactcacacttg 45122066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 45122110 - 45122220
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| ||||| | ||||  |||| ||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||| ||  |||||||||||    
T  45122110 actcttacccaaaaccttaagaaaatgagtttatgggttctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcaca 45122209  T
Q  117 cttgtacacaa 127  Q
    |||| ||||||    
T  45122210 cttgcacacaa 45122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 9482657 - 9482767
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||  ||||||| | |||||||||||||||| || |||||||||||| ||||||||||||||| | |||||||| ||||||||| |||||||  ||    
T  9482657 actcttatacaaaatctttaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatcccatgtggaacatataact--ca 9482754  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  9482755 cttgtacacaaca 9482767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 34835314 - 34835205
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| |||||   |||||||||| ||||||| || |||||||||||| ||||||||||||||| ||||||||| ||||||| || ||||||||||     
T  34835314 actcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatcggatgtgggacatataactcacc 34835215  T
Q  117 cttgtacaca 126  Q
    ||||||||||    
T  34835214 cttgtacaca 34835205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 30359376 - 30359264
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| ||||| | |||||| ||||||||||| || ||||| |||||| |||||||||| |||| | |||||||||||||| ||  |||||||||||    
T  30359376 actcttacccaaaaccttaaggctatgggtttatgggtcctcttgcttataaggtgttcaacatttactcttttatccgatgtgagacatataactcaca 30359277  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  30359276 cttgtacacaaca 30359264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 20870626 - 20870731
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac---tataactca 114  Q
    |||||||  ||||||| ||||||| |||||||||| || |||||||||||| | ||||||||||||| ||||||||| ||||||||||   |||||||||    
T  20870626 actcttatccaaaatcttaaggcagtgggtttatgggtcctcttacttataagatgttcaacctttactattttatctgatgtggaacatatataactca 20870725  T
Q  115 cacttg 120  Q
    ||||||    
T  20870726 cacttg 20870731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 45121709 - 45121820
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaactataactcacac 117  Q
    |||||||||||||| | ||||||  | ||||||||  | |||||||||||| |||| |||||||||| | ||||||||||||||| || | |||||||||    
T  45121709 actcttactcaaaaccttaaggctgtaggtttatggatcctcttacttataaggtgatcaacctttactcttttatccgatgtgggacaacaactcacac 45121808  T
Q  118 ttgtacacaaca 129  Q
    ||||||||||||    
T  45121809 ttgtacacaaca 45121820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 3037778 - 3037865
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac---tataactcacactt 119  Q
    |||| |||||||||||||||| |||||||||||| |||||||||| |||| ||||| ||||||||||||||   ||||||||||||||    
T  3037778 taagacaatgggtttatgagtcctcttacttataaggtgttcaacatttactatttcatccgatgtggaacatatataactcacactt 3037865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 8794189 - 8794104
Alignment:
Q  45 ggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaaca 129  Q
    ||||||||||| |||||||||||| | |||||||| |||||| |||||||||||||| ||  ||||||||||||||||||||||||    
T  8794189 ggtttatgagtcctcttacttataagatgttcaacatttattcttttatccgatgtgagacatataactcacacttgtacacaaca 8794104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 5420756 - 5420672
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtgg 102  Q
    ||||||||  |||| | ||||||||||||||||||||| |||||||||||| | ||||||||||||| |||| ||||||||||||    
T  5420756 actcttacaaaaaaccttaaggcaatgggtttatgagtcctcttacttataagatgttcaacctttactattctatccgatgtgg 5420672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 3670165 - 3670062
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||| ||| |||||||| || ||| |||||||| |||||| |||||||| ||||||||||||||||| || |||||||||||    
T  3670165 actcttacccaaaaccttaaggaaataggtttatgggtcctcatacttataaggtgttaaacctttactattttatccgatgtgggacatataactcaca 3670066  T
Q  117 cttg 120  Q
    ||||    
T  3670065 cttg 3670062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 9309443 - 9309348
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||||||||| ||||| | || |||||||||||| |||||||||| |||| | ||||||||||||||| || ||||||||||||||| ||||||||    
T  9309443 taaggcaatgagtttaagggtcctcttacttataaggtgttcaacatttactcttttatccgatgtgggacatataactcacacttgcacacaaca 9309348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 18372676 - 18372762
Alignment:
Q  38 ggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtaca 124  Q
    |||||||||||||||||| ||||||||||||  |||||||||||||| ||||||||||||  |||||| ||||| |||||||||||||    
T  18372676 ggcaatgggtttatgagtcctcttacttata-agtgttcaacctttactattttatccgaaatggaacatataaatcacacttgtaca 18372762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 25561886 - 25561981
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||| ||||| ||||||| || |||||||||||| |||||||||| |||| | ||||||||||||||| || ||||||||||||||||| ||||||    
T  25561886 taagacaatgagtttatgggtcctcttacttataaggtgttcaacgtttactcttttatccgatgtgggacatataactcacacttgtagacaaca 25561981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 40518176 - 40518062
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaaccttta--ttattttatccgatgtggaac-tataactca 114  Q
    |||||||| ||||| | ||||||| |||||||||| || |  ||||||||| |||||||||||||||  || |||||||| ||||||||| |||||||||    
T  40518176 actcttacccaaaaccttaaggcattgggtttatgggtccatttacttataaggtgttcaacctttacttttttttatccaatgtggaacatataactca 40518077  T
Q  115 cacttgtacacaaca 129  Q
    |||||| ||||||||    
T  40518076 cacttgaacacaaca 40518062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 147556 - 147454
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| |||||   ||||||||| |||||||| || |||||| ||||| ||||||||||||||| | ||||||||||||||| || |||||||||||    
T  147556 actcttacccaaaactttaaggcaataggtttatgggtcctcttatttataaggtgttcaacctttactcttttatccgatgtgggacatataactcaca 147457  T
Q  117 ctt 119  Q
    |||    
T  147456 ctt 147454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 9483240 - 9483320
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgat 98  Q
    |||||||| ||||| | |||| ||||||||||||| || |||||||||||| ||||||||||||||| | |||||||||||    
T  9483240 actcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgat 9483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 18373004 - 18373095
Alignment:
Q  38 ggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    ||||||| |||||||||| |||||| ||||| ||||||||||||||| |||||||||||| |||| || ||||| |||||| |||||||||||    
T  18373004 ggcaatgagtttatgagtcctcttatttataaggtgttcaacctttactattttatccgaagtgggacatataaatcacac-tgtacacaaca 18373095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 37544543 - 37544655
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| ||||| | ||| | ||||| |||||| || ||||| ||||||  |||||||||||||| |||||||||||||||| ||  |||||||||||    
T  37544543 actcttacccaaaaccttaaagtaatggatttatgggtcctctttcttataatgtgttcaacctttactattttatccgatgtgcgacttataactcaca 37544642  T
Q  117 cttgtacacaaca 129  Q
    ||||| |||||||    
T  37544643 cttgtgcacaaca 37544655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 41972243 - 41972151
Alignment:
Q  38 ggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    ||||||||||||||| || || | ||||||| ||||||||||||||| | || |||||||||||| || ||||||||||||||| ||||||||    
T  41972243 ggcaatgggtttatgggtcctatcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcacacaaca 41972151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 43274832 - 43274944
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||||||||| | |||| |||| |||||||| || ||||||||||||   | ||||||||||| | ||||||| |||||| ||| |||||||||||    
T  43274832 actcttactcaaaaccttaagacaataggtttatgggtcctcttacttataatatattcaacctttactcttttatctgatgtgaaacatataactcaca 43274931  T
Q  117 cttgtacacaaca 129  Q
    ||| |||||||||    
T  43274932 cttatacacaaca 43274944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 1513992 - 1514078
Alignment:
Q  42 atgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcacacttgtacacaa 127  Q
    ||||||||| | || |||||||||||| ||||||||||||||| | ||||||||||||| |||  ||||||||| ||||||||||||    
T  1513992 atgggtttaagggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggatatataactcatacttgtacacaa 1514078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 6876915 - 6877028
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac--tataactcac 115  Q
    |||||||| ||||| | |||| ||||| || |||| ||  ||||| ||||| ||||||||||||||| | ||||||||||||||| ||  ||||||||||    
T  6876915 actcttacccaaaaccctaagacaatgagtgtatgggtcatcttatttataaggtgttcaacctttacttttttatccgatgtgggactatataactcac 6877014  T
Q  116 acttgtacacaaca 129  Q
    ||||| ||||||||    
T  6877015 acttgcacacaaca 6877028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 30441190 - 30441083
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatat----ggtgttcaacctttattattttatccgatgtggaac-tataact 112  Q
    |||||||| ||||| | |||||||||||||||||| |  ||||||||||||     ||||||||||||||| ||||||| ||||||||| || |||||||    
T  30441190 actcttacccaaaaccttaaggcaatgggtttatgggccctcttacttataattaaggtgttcaacctttactattttagccgatgtgggacatataact 30441091  T
Q  113 cacacttg 120  Q
    ||||||||    
T  30441090 cacacttg 30441083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 40518687 - 40518577
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||| || |||||||||| || |||||| ||||| ||||||||||||||| | || |||| ||||||| || |||||||||||    
T  40518687 actcttacccaaaaccttaagtcattgggtttatgggtcctcttatttataaggtgttcaacctttacttttctatctgatgtgggacatataactcaca 40518588  T
Q  117 cttgtacacaa 127  Q
    |||| ||||||    
T  40518587 cttgaacacaa 40518577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 9608826 - 9608737
Alignment:
Q  42 atgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaacag 130  Q
    ||||||||||| ||  ||||||||||| ||||||||||||||| | || |||||||| ||| || ||||||||||||||| |||||||||    
T  9608826 atgggtttatgggtcatcttacttataaggtgttcaacctttacttttctatccgatatgggacatataactcacacttgcacacaacag 9608737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 45122729 - 45122648
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatg 99  Q
    |||| ||| ||||| | |||| ||||| ||||||| || |||||||||||| ||||||||||||||| ||||||||||||||    
T  45122729 actcatacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatg 45122648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 70327 - 70438
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    ||||||||  |||| | ||||||| |||||||||| || |||||||||||| | |||||||| |||| | ||||||||||||||| || ||||||||||     
T  70327 actcttacctaaaaccttaaggcagtgggtttatgggtcctcttacttataagatgttcaacatttactcttttatccgatgtgggacatataactcac- 70425  T
Q  117 cttgtacacaaca 129  Q
     ||||||||||||    
T  70426 tttgtacacaaca 70438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 57 - 119
Target Start/End: Original strand, 18372791 - 18372854
Alignment:
Q  57 ctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacactt 119  Q
    |||||||||||| ||||||||||||||| |||||||||||||||| ||  ||||||||||||||    
T  18372791 ctcttacttataaggtgttcaacctttactattttatccgatgtgtgacatataactcacactt 18372854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 32305582 - 32305503
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccga 97  Q
    |||||||  ||||||| ||||| |||||||||||  ||  ||||||||||| ||||||||||||||| ||||||||||||    
T  32305582 actcttatccaaaatcttaaggtaatgggtttataggtcttcttacttataaggtgttcaacctttactattttatccga 32305503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 41416263 - 41416322
Alignment:
Q  57 ctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcac 115  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||| || ||||||||||    
T  41416263 ctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcac 41416322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 9507887 - 9507821
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaaccttta 84  Q
    |||||||| ||||| | ||||| ||||||||||||||| |||||||||||| ||| |||||||||||    
T  9507887 actcttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtattcaaccttta 9507821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 18372349 - 18372411
Alignment:
Q  58 tcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacactt 119  Q
    ||||||||||| ||||||||||||||| |||||||||||||||| ||  ||||||||||||||    
T  18372349 tcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacactt 18372411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 34835580 - 34835470
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatc-cgatgtggaac-tataactcac 115  Q
    |||||||| |||||   |||||||||| ||||||| || |||||||||||| |||||| |||||||| |||||||||  || |||| || ||||||||||    
T  34835580 actcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacctttactattttatcgggacgtgggacatataactcac 34835481  T
Q  116 acttgtacaca 126  Q
     ||||||||||    
T  34835480 ccttgtacaca 34835470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 34835846 - 34835736
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatc-cgatgtggaac-tataactcac 115  Q
    |||||||| |||||   |||||||||| ||||||| || |||||||||||| |||||| |||||||| |||||||||  || |||| || ||||||||||    
T  34835846 actcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacctttactattttatcgggacgtgggacatataactcac 34835747  T
Q  116 acttgtacaca 126  Q
     ||||||||||    
T  34835746 ccttgtacaca 34835736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 18380070 - 18380171
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcaca 116  Q
    |||||||||||||| | ||||| | |||||||||  |  | |||||||||| ||||||||||||||| |||||||| |||||| |||  |||||||||||    
T  18380070 actcttactcaaaaccttaaggtagtgggtttataggcccccttacttataaggtgttcaacctttactattttattcgatgtgggatatataactcaca 18380169  T
Q  117 ct 118  Q
    ||    
T  18380170 ct 18380171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 8918817 - 8918929
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||| |||| |||||||| || ||||||||||||  |||||||||||||| | |  |||| ||||||| || | |||||||||    
T  8918817 actcttacccaaaaccttaagtcaataggtttatgggtcctcttacttataaagtgttcaacctttactctgctatctgatgtgggacatgtaactcaca 8918916  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  8918917 cttgcacacaaca 8918929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 18372047 - 18372131
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtgg 102  Q
    |||||||| ||||| | ||| |||||| |||||||  | |||||||||||| ||||||||||||||| ||||||||  |||||||    
T  18372047 actcttacccaaaaccttaaagcaatgagtttatggatcctcttacttataaggtgttcaacctttactattttattggatgtgg 18372131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 6732000 - 6731906
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||||||||| | ||||||||||  |||||| ||||||||||||         |||||||||| ||||||||||||||||| || |||||||||||    
T  6732000 actcttactcaaaaccttaaggcaatgaatttatgggttctcttactt---------tcaacctttactattttatccgatgtgggacatataactcaca 6731910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 40579587 - 40579662
Alignment:
Q  46 gtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttg 120  Q
    ||||||| || |||||||||||| ||||||||||||||| |||||||||| || || ||| ||||| |||||||||    
T  40579587 gtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatatgaaacatataattcacacttg 40579662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 129
Target Start/End: Complemental strand, 9309065 - 9308970
Alignment:
Q  37 aggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt---ggaactataactcacacttgtacacaaca 129  Q
    |||||||||||||||| || ||||||||||||   |||||||| |||| | ||||||| |||||   |||  ||||||||||||||| ||||||||    
T  9309065 aggcaatgggtttatgggtcctcttacttataacatgttcaacttttactcttttatctgatgtgtaggacatataactcacacttgcacacaaca 9308970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 25561736 - 25561781
Alignment:
Q  57 ctcttacttatatggtgttcaacctttattattttatccgatgtgg 102  Q
    |||||||||||| ||||||||||||||| | |||||||||||||||    
T  25561736 ctcttacttataaggtgttcaacctttactcttttatccgatgtgg 25561781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 45123059 - 45123002
Alignment:
Q  70 ggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacaca 126  Q
    |||||| |||||||| ||||||||||||||||| || ||||||||||||||| |||||    
T  45123059 ggtgtttaacctttactattttatccgatgtgggacatataactcacacttgcacaca 45123002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 1014337 - 1014401
Alignment:
Q  57 ctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcacacttg 120  Q
    |||||||||||| ||||||||||||||| ||||||||| |||||  ||  |||||||||||||||    
T  1014337 ctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactcacacttg 1014401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 147888 - 147822
Alignment:
Q  64 ttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    ||||||| |||||||| |||| | ||||||| ||||||| || ||||||||||||||| ||||||||    
T  147888 ttatatgttgttcaacatttacttttttatcagatgtgggacatataactcacacttgcacacaaca 147822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 16107783 - 16107671
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||||||||||||||||||| |||||||||||| |||||| |||||||| | ||||||||||||||  || |||||||||||    
T  16107783 actcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtttaacctttacttttttatccgatgtgacacatataactcaca 16107684  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  16107683 cttgtacacaaca 16107671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 2377859 - 2377747
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||||||||||| || |||||||||||| ||||||||||||||| | ||||| ||||||||| || |||||||||||    
T  2377859 actcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatataactcaca 2377760  T
Q  117 cttgtacacaaca 129  Q
    ||||| |||||||    
T  2377759 cttgtgcacaaca 2377747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 16454680 - 16454568
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||  ||||||| |||||||||||||||||| || |||||||||||| |||||||||| |||||| ||||||| ||||||| ||  ||||||||||    
T  16454680 actcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttattcttttatctgatgtgggacacataactcaca 16454581  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  16454580 cttgtacacaaca 16454568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 32460633 - 32460733
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||| |||||||| || |||||||||||    
T  32460633 actcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatacgatgtgggacatataactcaca 32460732  T
Q  117 c 117  Q
    |    
T  32460733 c 32460733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 16108151 - 16108056
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||||||||||||||||| || |||||||||||| |||||||||| |||| | ||||||| |||||||||| ||||||||||||||||||||||||    
T  16108151 taaggcaatgggtttatgggtcctcttacttataaggtgttcaacatttactcttttatctgatgtggaacatataactcacacttgtacacaaca 16108056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 29518608 - 29518505
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||| |||||||||||| || |||||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||||    
T  29518608 actcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcaca 29518509  T
Q  117 cttg 120  Q
    ||||    
T  29518508 cttg 29518505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 29519025 - 29518922
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||| |||||||||||| || |||||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||||    
T  29519025 actcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcaca 29518926  T
Q  117 cttg 120  Q
    ||||    
T  29518925 cttg 29518922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 32741284 - 32741181
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||| |||||||||||| || |||||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||||    
T  32741284 actcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcaca 32741185  T
Q  117 cttg 120  Q
    ||||    
T  32741184 cttg 32741181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 3409364 - 3409261
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||| ||||||| || |||||||||||| ||||||||||||||| ||||||||| ||||||| || |||||||||||    
T  3409364 actcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcaca 3409265  T
Q  117 cttg 120  Q
    ||||    
T  3409264 cttg 3409261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 26544154 - 26544051
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||||||||| | ||||||  |||||||||| || ||||||||||||  |||||||||||||| ||||||||||||||||| || |||||||||||    
T  26544154 actcttactcaaaaccttaaggcggtgggtttatgggtcctcttacttataacgtgttcaacctttactattttatccgatgtgggacatataactcaca 26544055  T
Q  117 cttg 120  Q
    ||||    
T  26544054 cttg 26544051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 35210309 - 35210206
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| ||||| | ||||||||||| |||||| || |||||||||||| ||||||||||||||| |||||||||||||||| ||  |||||||||||    
T  35210309 actcttacccaaaaccttaaggcaatggttttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcaca 35210210  T
Q  117 cttg 120  Q
    ||||    
T  35210209 cttg 35210206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 2378214 - 2378128
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttg 120  Q
    ||||| |||||||||||| || |||||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||||||||    
T  2378214 taaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttg 2378128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 2843660 - 2843547
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttc-tcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcac 115  Q
    |||||||| ||||| | |||||||||| ||||||| | || ||||||||||| |||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  2843660 actcttacccaaaaccttaaggcaatgagtttatggggtcctcttacttataaggtgttcaacttttattattttatccgatgtgaaacatataactcac 2843561  T
Q  116 acttgtacacaaca 129  Q
    | |||| |||||||    
T  2843560 aattgtgcacaaca 2843547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 3415563 - 3415462
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    ||||||||  |||| | |||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||  ||||||| || |||||||||||    
T  3415563 actcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttatatggtgttcaacctttactattttatgtgatgtgggacatataactcaca 3415464  T
Q  117 ct 118  Q
    ||    
T  3415463 ct 3415462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 1127465 - 1127381
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtgg 102  Q
    |||||||| ||||| | ||||| ||||||||||||||| |||||||||||| ||||||||||||||| ||||||| |||||||||    
T  1127465 actcttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttacccgatgtgg 1127381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 2578496 - 2578607
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||| ||||||||||| || ||||||||||||  |||||||||||||| | ||||||||| ||||| || |||||||||||    
T  2578496 actcttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatccg-tgtgggacatataactcaca 2578594  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  2578595 cttgtacacaaca 2578607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 10074416 - 10074528
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcaca 116  Q
    |||||||| ||||| | |||||||||| ||||||| || |||||||||||| ||||||||||||||| | || |||||||||| ||| || |||||||||    
T  10074416 actcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgggacctctaactcaca 10074515  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  10074516 cttgcacacaaca 10074528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 3058331 - 3058228
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||||||||||||||||  | ||| |||||||| ||||||||||||||| ||||||||||||||||| || ||||||| |||    
T  3058331 actcttacccaaaaccttaaggcaatgggtttatggatcctcatacttataaggtgttcaacctttactattttatccgatgtgggacatataactaaca 3058232  T
Q  117 cttg 120  Q
    ||||    
T  3058231 cttg 3058228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 14748391 - 14748494
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||| |||||| ||||||| || |||||| ||||| ||||||||||||||| ||||||||||||||||| || |||||||||||    
T  14748391 actcttacccaaaaccttaacgcaatgagtttatgggtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacatataactcaca 14748490  T
Q  117 cttg 120  Q
    ||||    
T  14748491 cttg 14748494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 2579927 - 2580037
Alignment:
Q  20 tcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacact 118  Q
    |||||| ||||| | ||||||  |||||||||| || ||||||||||||  |||||||||||||| | ||||||||||||||| || |||||||||||||    
T  2579927 tcttacccaaaaccttaaggctgtgggtttatgggtcctcttacttataatgtgttcaacctttactcttttatccgatgtgggacatataactcacact 2580026  T
Q  119 tgtacacaaca 129  Q
    || ||||||||    
T  2580027 tgcacacaaca 2580037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 35 - 127
Target Start/End: Original strand, 9062419 - 9062512
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaa 127  Q
    |||| ||||| |||||||||| |||||||||||| | ||||||||||||| ||||||||||||||||| || ||||||||||| || |||||||    
T  9062419 taagacaatgagtttatgagtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcacatttatacacaa 9062512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 16455012 - 16454900
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||||||| |||||||| || || ||||||||| ||||||||||||||| | ||||||| ||||||| ||  ||||||||||    
T  16455012 actcttacccaaaaccttaaggcaataggtttatgggtcctattacttataaggtgttcaacctttactcttttatctgatgtgggacacataactcaca 16454913  T
Q  117 cttgtacacaaca 129  Q
     ||||||||||||    
T  16454912 tttgtacacaaca 16454900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 593766 - 593865
Alignment:
Q  22 ttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttg 120  Q
    |||| ||||| | ||||||| | ||||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||| || || ||||||||||||    
T  593766 ttacccaaaaccttaaggcagtcggtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatacaactcacacttg 593865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 1846853 - 1846770
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg 101  Q
    |||||||  ||||| | ||||||||||| |||||| || |||||||||||| ||||||||||||||| ||||||||||||||||    
T  1846853 actcttatccaaaaccttaaggcaatggatttatgggtgctcttacttataaggtgttcaacctttactattttatccgatgtg 1846770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 120
Target Start/End: Complemental strand, 3409747 - 3409662
Alignment:
Q  36 aaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttg 120  Q
    ||||||||||||||||| || |||||||||||| | |||||||| |||| ||||||||| ||||||| || |||||||||||||||    
T  3409747 aaggcaatgggtttatgggtcctcttacttataagatgttcaacttttactattttatctgatgtggtacatataactcacacttg 3409662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 10911671 - 10911558
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaaccttta-ttattttatccgatgt-ggaactataactcac 115  Q
    ||||||| ||||||   |||||||||| |||||||||| |||||||||||| ||||||||||||||| || ||||||| ||||| |||  ||||||||||    
T  10911671 actcttattcaaaactttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactttttttatctgatgtaggacatataactcac 10911572  T
Q  116 acttgtacacaaca 129  Q
    ||||| | ||||||    
T  10911571 acttgcatacaaca 10911558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 1950238 - 1950350
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||||||||| | ||||||| | | ||||||  | ||||||||| || ||||||||||||||| | ||||||||||||||| || |||||||||||    
T  1950238 actcttactcaaaaccttaaggcattagatttatggctcctcttacttgtaaggtgttcaacctttactcttttatccgatgtgggacatataactcaca 1950337  T
Q  117 cttgtacacaaca 129  Q
    ||| ||| |||||    
T  1950338 cttatacgcaaca 1950350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 10074048 - 10074156
Alignment:
Q  22 ttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcacacttg 120  Q
    |||| ||||| | |||||||||||||||||| || |||||||||||| |||||||||| |||| | || |||||||||| |||  |||||||||| ||||    
T  10074048 ttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacgtttacttttctatccgatgtgggatatataactcacccttg 10074147  T
Q  121 tacacaaca 129  Q
     ||||||||    
T  10074148 cacacaaca 10074156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 100
Target Start/End: Original strand, 5958673 - 5958738
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt 100  Q
    |||| ||||| ||||||||||||||||| ||||| ||||||||||||||| | |||||||||||||    
T  5958673 taagacaatgagtttatgagttctcttatttataaggtgttcaacctttactgttttatccgatgt 5958738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 10073669 - 10073779
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||||| |||| ||||| |||||||  | |||||||||||| |||||||||||||||   |||| |||||||||| || ||||||| |||    
T  10073669 actcttacccaaaatcttaagccaatgagtttatggatcctcttacttataaggtgttcaaccttta--cttttctccgatgtgggacatataactaaca 10073766  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  10073767 cttgcacacaaca 10073779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 5832108 - 5832191
Alignment:
Q  47 tttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||||| || |||||||||||| ||||||||||||||| | |||||||| |||||| || ||||||| |||||||| |||||||    
T  5832108 tttatgggtcctcttacttataaggtgttcaacctttactcttttatccaatgtgggacatataacttacacttgtgcacaaca 5832191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 8482031 - 8481920
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaactataactcacac 117  Q
    |||||||| ||||||| |||||||||| ||||||||||  ||| | |||||  |||||||||||  | | || |||| ||||||||  ||||||||||||    
T  8482031 actcttacccaaaatcttaaggcaatgagtttatgagtcatctcatttataaagtgttcaacctccacttttatatctgatgtggacatataactcacac 8481932  T
Q  118 ttgtacacaaca 129  Q
    ||| ||||||||    
T  8481931 ttgcacacaaca 8481920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 2579203 - 2579270
Alignment:
Q  63 cttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||||| |||||||||| |||| | ||||||||||||||| || ||||||| ||||||||||||||||    
T  2579203 cttataaggtgttcaacttttactcttttatccgatgtgggacatataactaacacttgtacacaaca 2579270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 6999849 - 6999959
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcaca 116  Q
    |||||||  ||||| | ||||||| || |||||||  | ||||||| |||| |||||||||| |||| | ||||||||||||| |||  |||||||||||    
T  6999849 actcttatccaaaaccttaaggcagtgagtttatggatcctcttacatataaggtgttcaacttttacttttttatccgatgtaggacatataactcaca 6999948  T
Q  117 cttgtacacaa 127  Q
    ||| |||||||    
T  6999949 cttatacacaa 6999959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 2579543 - 2579645
Alignment:
Q  16 atactcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactca 114  Q
    ||||| |||| ||||| | |||||||||| ||||||| |  |||||||||||| ||| | | ||||||| | |||| |||||||||| || |||||||||    
T  2579543 atacttttacccaaaaccttaaggcaatgagtttatgggccctcttacttataaggtatccgacctttacttttttgtccgatgtgggacatataactca 2579642  T
Q  115 cac 117  Q
    |||    
T  2579643 cac 2579645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 35210544 - 35210499
Alignment:
Q  57 ctcttacttatatggtgttcaacctttattattttatccgatgtgg 102  Q
    |||||||||| | ||| ||||||||||| |||||||||||||||||    
T  35210544 ctcttacttacaaggtattcaacctttactattttatccgatgtgg 35210499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 17294682 - 17294570
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||||||||||| || ||||||||||||  |||||||||||||| | ||||||||||||||| || |||||||||||    
T  17294682 actcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatccgatgtgggacatataactcaca 17294583  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  17294582 cttgtacacaaca 17294570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 34365030 - 34364918
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| ||||| | |||||| ||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||| ||  |||||||||||    
T  34365030 actcttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaacctttattattttatccgatgtgtgacatataactcaca 34364931  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  34364930 cttgcacacaaca 34364918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 44290509 - 44290614
Alignment:
Q  16 atactcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactca 114  Q
    |||||||||| ||||| | |||||||||||||||||| || |||||||||||| | ||||||||||||| ||||||||||||||||| || |||||||||    
T  44290509 atactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactca 44290608  T
Q  115 cacttg 120  Q
    ||||||    
T  44290609 cacttg 44290614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 3550825 - 3550722
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| |||||   ||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||| ||||||| || |||||||||||    
T  3550825 actcttacccaaaactttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcaca 3550726  T
Q  117 cttg 120  Q
    ||||    
T  3550725 cttg 3550722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 44290882 - 44290981
Alignment:
Q  22 ttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttg 120  Q
    |||| ||||| | |||||||||||||||||| || |||||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||||||||    
T  44290882 ttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttg 44290981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 26661575 - 26661687
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||| ||||||| || |||| ||||||| ||||||||||||||| | ||||| ||||||||| || |||||||||||    
T  26661575 actcttacccaaaaccttaaggcaatgagtttatgggtcctctcacttataaggtgttcaacctttactcttttacccgatgtgggacatataactcaca 26661674  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  26661675 cttgtacacaaca 26661687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 41157480 - 41157368
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||||||||| |  ||||||||||||||||| || |||||||||||| |||||||||| |||| | ||||||| ||||||| || |||||||||||    
T  41157480 actcttactcaaaacctaaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttactcttttatctgatgtgggacatataactcaca 41157381  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  41157380 cttgcacacaaca 41157368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 29798287 - 29798192
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcacacttgtacacaaca 129  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| |||| |||  ||||||||||||||| | ||||||    
T  29798287 taaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatccaatgtaggacatataactcacacttgcatacaaca 29798192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 41184495 - 41184590
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaaca 129  Q
    |||||||||||||||||| || ||||||||||||  |||||||||||||| |||||||||||||||| ||  ||||||||||||||| ||||||||    
T  41184495 taaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaaca 41184590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 11977385 - 11977276
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||||| | ||||||||||| |||||||||||| |||||||||| |||| | ||||| ||||||||| || |||||||||||    
T  11977385 actcttacccaaaaccttaaggcattaggtttatgagtgctcttacttataaggtgttcaacatttactgttttacccgatgtgggacatataactcaca 11977286  T
Q  117 cttgtacaca 126  Q
    ||||||||||    
T  11977285 cttgtacaca 11977276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 37556216 - 37556104
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattatttt-atccgatgtggaac-tataactcac 115  Q
    |||||||| ||||| | |||||| ||||||||||| || |||||||||||| | ||||||||||||| |||||| ||||||||||| || ||||||||||    
T  37556216 actcttacccaaaaccttaaggctatgggtttatg-gtcctcttacttataagatgttcaacctttactatttttatccgatgtgggacatataactcac 37556118  T
Q  116 acttgtacacaaca 129  Q
    ||||||||||||||    
T  37556117 acttgtacacaaca 37556104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 31767214 - 31767326
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||||| | |||| ||| || |||||||||||| ||||||||||||||| | |||||||||||||||||| |||||| ||||    
T  31767214 actcttacccaaaaccttaaggcattaggttaatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtggaacatataacccaca 31767313  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  31767314 cttgcacacaaca 31767326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 34364612 - 34364500
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| ||||| | |||||| ||||||||| |  | |||||||||||| ||||||||||||||| |||||||||||||||| ||  |||||||||||    
T  34364612 actcttacccaaaaccttaaggctatgggtttacggatcctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcaca 34364513  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  34364512 cttgcacacaaca 34364500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 41142460 - 41142365
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||||||||||||||||| || || ||||||||| ||||||||||||||| | ||||||||||||||| || ||||||||||||||| ||| ||||    
T  41142460 taaggcaatgggtttatgggtccttttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgcacagaaca 41142365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 3537226 - 3537303
Alignment:
Q  44 gggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttg 120  Q
    ||||||||| || |||||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||||||||    
T  3537226 gggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttg 3537303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 24600367 - 24600479
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||| ||||| |||||||||||||||||||||||   ||||||||||||| | || |||||||| ||| || |||||||||||    
T  24600367 actcttacacaaaaccttaagacaatgagtttatgagttctcttacttataatatgttcaacctttacttttctatccgatatgggacatataactcaca 24600466  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  24600467 cttgcacacaaca 24600479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 34649543 - 34649431
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||||| | |||||||| |||||   ||||||| ||||||||||||||| | ||||||||||||||| || |||||||||||    
T  34649543 actcttacccaaaaccttaaggcattaggtttatgggttcttgcacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcaca 34649444  T
Q  117 cttgtacacaaca 129  Q
    |||||| ||||||    
T  34649443 cttgtatacaaca 34649431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 40082511 - 40082400
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcaca 116  Q
    |||||||| ||||| | ||||||||||  ||||||| | |||||||||||| ||||||||||||||| ||||||||||||||| |||  |||||||||||    
T  40082511 actcttacccaaaaccttaaggcaatgaatttatga-tcctcttacttataaggtgttcaacctttactattttatccgatgtaggacatataactcaca 40082413  T
Q  117 cttgtacacaaca 129  Q
    ||||  |||||||    
T  40082412 cttgcgcacaaca 40082400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 129
Target Start/End: Original strand, 66522 - 66637
Alignment:
Q  15 tatactcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactc 113  Q
    ||||||||||| ||||| | |||||| ||  |||||||  | |||||||||||| ||||||||||||||| | || |||||||| |||||| ||||||||    
T  66522 tatactcttacccaaaaccttaaggccatatgtttatggatcctcttacttataaggtgttcaacctttacttttctatccgatatggaacatataactc 66621  T
Q  114 acacttgtacacaaca 129  Q
    ||||||| ||||||||    
T  66622 acacttgcacacaaca 66637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 3875401 - 3875496
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaaca 129  Q
    ||||||||||||||||||||| |||||||||||| ||||| ||||||||| | |||||||||||||| ||  ||||||| || |||| ||||||||    
T  3875401 taaggcaatgggtttatgagtcctcttacttataaggtgtacaacctttacttttttatccgatgtgtgacatataactgactcttgcacacaaca 3875496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 32594769 - 32594872
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcaca 116  Q
    |||||||| ||||| | |||| ||||| ||||||| || |||||||||||| ||||||||||||||| ||||||||| ||||| |||  |||||||||||    
T  32594769 actcttacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtaggacatataactcaca 32594868  T
Q  117 cttg 120  Q
    ||||    
T  32594869 cttg 32594872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 14318972 - 14318875
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactca 114  Q
    |||||||| ||||| | ||||||||| | |||||| ||  ||||||||||| ||||||||||||||| |||||||||||| ||||||| |||||||||    
T  14318972 actcttacccaaaaccttaaggcaatagatttatgggtcttcttacttataaggtgttcaacctttactattttatccgacgtggaacatataactca 14318875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 37850680 - 37850765
Alignment:
Q  45 ggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||||||| ||||||||||||||| |||||||||||| || | |||||| |||||||| || ||||||||||||||| ||||||||    
T  37850680 ggtttatgggttctcttacttataaggtgttcaacctctactgttttatgcgatgtgggacatataactcacacttgcacacaaca 37850765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 3537652 - 3537736
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtgg 102  Q
    |||||||| ||||| | |||| ||||||||||||  || |||||||| ||| ||||||||||||||| |||||||||||||||||    
T  3537652 actcttacccaaaaccttaagccaatgggtttataggtcctcttactcataaggtgttcaacctttactattttatccgatgtgg 3537736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 5320018 - 5320130
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||| ||| ||||||| || |||| ||||||| |||||||||| |||| | || ||||||||||||||| |||||||||||    
T  5320018 actcttacccaaaaccttaaggctatgagtttatgggtcctctcacttataaggtgttcaacttttacttttctatccgatgtggaacatataactcaca 5320117  T
Q  117 cttgtacacaaca 129  Q
    |||| | ||||||    
T  5320118 cttgcatacaaca 5320130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 22077548 - 22077660
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| ||||| | |||||| | | ||||||| || |||||||||||| ||||||||||||||| | || ||||||||||| ||  |||||||||||    
T  22077548 actcttacccaaaaccttaaggctacgagtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataactcaca 22077647  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  22077648 cttgcacacaaca 22077660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 26661951 - 26662063
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcaca 116  Q
    |||||||| ||||| | ||||||||| |||||||| ||  ||| ||||||| ||||||||||||||| | ||||||| ||| | |||  |||||||||||    
T  26661951 actcttacccaaaaccttaaggcaatcggtttatgggtcttctcacttataaggtgttcaacctttactcttttatctgatatgggatatataactcaca 26662050  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  26662051 cttgtacacaaca 26662063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 38804408 - 38804520
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||  |||||||||||  | ||||||||||||  |||||||||||||| | |||||| |||||||| || |||||||||||    
T  38804408 actcttacccaaaaccttaaggttatgggtttatggatcctcttacttataatgtgttcaacctttactcttttattcgatgtgggacgtataactcaca 38804507  T
Q  117 cttgtacacaaca 129  Q
    |||||| ||||||    
T  38804508 cttgtaaacaaca 38804520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 41157096 - 41156984
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||| |||||| ||||||| || |||||||||||| ||||||||||||||| | ||||||||| | ||| || ||||| |||||    
T  41157096 actcttacccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgttatgggacatataattcaca 41156997  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  41156996 cttgcacacaaca 41156984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 41759588 - 41759485
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| ||||| | ||||||||||| ||||||  |  ||||||||||| |||||||||| |||| |||||||||||||||| ||  |||||||||||    
T  41759588 actcttacccaaaaccttaaggcaatggatttatggatcatcttacttataaggtgttcaacttttactattttatccgatgtgtgacatataactcaca 41759489  T
Q  117 cttg 120  Q
    ||||    
T  41759488 cttg 41759485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 50052103 - 50052178
Alignment:
Q  45 ggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacactt 119  Q
    |||||||| || |||||||||||| | ||||||||||||| ||||||||||||||||| || ||||||||||||||    
T  50052103 ggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcacactt 50052178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 45084457 - 45084378
Alignment:
Q  48 ttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcacacttgtacaca 126  Q
    ||||| || |||||||||||| ||||||||||||||| | ||||||||||||| |||  ||||||||||||||| |||||    
T  45084457 ttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggagatataactcacacttgcacaca 45084378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 48588541 - 48588644
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcaca 116  Q
    |||||||| ||||| | ||||||||||  |||| | ||  ||||||||||| ||||||||||||||| ||||||||||||||| |||  || ||||||||    
T  48588541 actcttacccaaaaccttaaggcaatgaatttacgggtcttcttacttataaggtgttcaacctttactattttatccgatgtcggacatagaactcaca 48588640  T
Q  117 cttg 120  Q
    ||||    
T  48588641 cttg 48588644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 37555796 - 37555723
Alignment:
Q  57 ctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    ||||||||||||  || ||||||||| | ||||||||||||||||| || |||||||||||||| |||||||||    
T  37555796 ctcttacttataatgtattcaaccttcactattttatccgatgtgggacttataactcacacttttacacaaca 37555723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 30630691 - 30630803
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| |||||   |||||||||| ||||||| |||||||||||||||  ||||  |||||||| | |||||||||||||| ||  ||||| |||||    
T  30630691 actcttacccaaaactttaaggcaatgtgtttatgggttctcttacttataaagtgtcaaacctttaattttttatccgatgtgagacatataaatcaca 30630790  T
Q  117 cttgtacacaaca 129  Q
    |||| ||| ||||    
T  30630791 cttgcacataaca 30630803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 39066293 - 39066365
Alignment:
Q  58 tcttacttatatggtgttcaacctttattattttatccgatgtggaa-ctataactcacacttgtacacaaca 129  Q
    ||||| ||||| ||||||||||||||| | || ||||||||||||||  ||||||||||||||| ||||||||    
T  39066293 tcttagttataaggtgttcaacctttacttttctatccgatgtggaatatataactcacacttgcacacaaca 39066365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 9956014 - 9955911
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggttta-tgagttctcttacttatatggtgttcaaccttta-ttattttatccgatgtggaac-tataactca 114  Q
    |||||||| ||||| | ||||||||| |||||| || || ||||||||||||  |||||||||||||| || ||||||| ||||||| || |||||||||    
T  9956014 actcttacccaaaaccttaaggcaattggtttaatgggtcctcttacttataatgtgttcaacctttactttttttatctgatgtgggacatataactca 9955915  T
Q  115 cact 118  Q
    ||||    
T  9955914 cact 9955911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 22077900 - 22077991
Alignment:
Q  37 aggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaa 127  Q
    |||| ||| ||||||| || |||||||||||| | ||||||||||||||| || |||||||| |  ||| ||||||||||||||| ||||||    
T  22077900 aggctatgagtttatgggtcctcttacttataagatgttcaacctttatttttctatccgatttaaaacatataactcacacttgcacacaa 22077991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 44043825 - 44043896
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattatt 89  Q
    |||||||| ||||||| |||| ||||||||||||| ||  ||||||||||| |||||||||| |||| ||||    
T  44043825 actcttacccaaaatcttaagacaatgggtttatgggtcatcttacttataaggtgttcaacatttactatt 44043896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 102
Target Start/End: Original strand, 45494044 - 45494115
Alignment:
Q  35 taaggcaatgggtttatgagttctcttact----tatatggtgttcaacctttattattttatccgatgtgg 102  Q
    ||||||||||||||||||  |  |||||||    |||||||||||||||||||| |||||||||||||||||    
T  45494044 taaggcaatgggtttatggatcatcttacttatatatatggtgttcaacctttactattttatccgatgtgg 45494115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 66140 - 66224
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttc-aacctttattattttatccgatgtg 101  Q
    |||||||| ||||| | |||||| || |||||||| || |||||||||||| ||||||| |||||||| | || |||||||||||    
T  66140 actcttacccaaaaccttaaggccataggtttatgggtcctcttacttataaggtgttcaaacctttacttttctatccgatgtg 66224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 4878872 - 4878796
Alignment:
Q  54 gttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    ||||||| |||||||   ||||||| ||| | |||||||||||||||||||| ||||||||||| ||| ||||||||    
T  4878872 gttctctcacttataaaatgttcaagcttcactattttatccgatgtggaacatataactcacaattgcacacaaca 4878796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 5528830 - 5528890
Alignment:
Q  41 aatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg 101  Q
    |||| |||||||||| |||||| ||||| | ||||||||||||| | ||||||||||||||    
T  5528830 aatgagtttatgagtcctcttatttataagatgttcaacctttactcttttatccgatgtg 5528890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 21378118 - 21378206
Alignment:
Q  42 atgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    ||||||||||| || |||||||||||| | | ||||||||||| | || |||||||| ||| || ||||||| ||||||| ||||||||    
T  21378118 atgggtttatgggtcctcttacttataagatattcaacctttactgttctatccgatctgggacatataactgacacttgcacacaaca 21378206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 44685545 - 44685449
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaa-cctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||||||||| ||||||  || |||||||||||| ||| ||||| |||||| | || |||||||| ||| || ||||||||||||||| ||||||||    
T  44685545 taaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 44685449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 10351265 - 10351182
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg 101  Q
    |||||||| ||||||| ||| | |||| ||||||| ||||||| |||||||  ||||||||||| |||| || |||| ||||||    
T  10351265 actcttacccaaaatcttaaagtaatgtgtttatgggttctctcacttataaagtgttcaacctctatttttctatctgatgtg 10351182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 22793384 - 22793271
Alignment:
Q  18 actcttactcaaaatcataaggc-aatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcac 115  Q
    |||||||||||||| | |||||| ||||||||||||  | |||| |||||||  || |||||||| || | || ||| |||||||| || ||||||||||    
T  22793384 actcttactcaaaaccgtaaggcaaatgggtttatggatcctctcacttataaagttttcaacctctacttttctatacgatgtgggacatataactcac 22793285  T
Q  116 acttgtacacaaca 129  Q
    |||||  |||||||    
T  22793284 acttgctcacaaca 22793271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 22077183 - 22077243
Alignment:
Q  38 ggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgat 98  Q
    ||||||| ||||||| || |||||||||||| ||| ||||||||||| | || ||||||||    
T  22077183 ggcaatgagtttatgggtcctcttacttataaggtattcaacctttacttttctatccgat 22077243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 129
Target Start/End: Complemental strand, 45839675 - 45839620
Alignment:
Q  74 ttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    ||||||||||||| || |||||||||||| || ||||||||| ||||||||||||||    
T  45839675 ttcaacctttatt-ttctatccgatgtgggacatataactcatacttgtacacaaca 45839620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 1157 - 1271
Alignment:
Q  16 atactcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactca 114  Q
    |||||||||| ||||| | ||||||||||||||||||||| || || |||||| ||||||||||||||| | |||||||| |||||| || |||||||||    
T  1157 atactcttacccaaaaccttaaggcaatgggtttatgagtcctttttcttataaggtgttcaacctttactcttttatccaatgtgggacatataactca 1256  T
Q  115 cacttgtacacaaca 129  Q
    |||||||||||||||    
T  1257 cacttgtacacaaca 1271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 3092 - 3150
Alignment:
Q  72 tgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    ||||||||||||| | ||||||||||||||| || |||||||||||| || ||||||||    
T  3092 tgttcaacctttactcttttatccgatgtgggacatataactcacacctgcacacaaca 3150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 30 - 129
Target Start/End: Complemental strand, 5870 - 5770
Alignment:
Q  30 aatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaac 128  Q
    |||| |||||||||||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||| ||  ||||||||||||||| |||||||    
T  5870 aatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgcgacatataactcacacttgcacacaac 5771  T
Q  129 a 129  Q
    |    
T  5770 a 5770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 5462 - 5389
Alignment:
Q  57 ctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcacacttgtacacaaca 129  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| |||  ||||||||||||||| ||||||||    
T  5462 ctcttacttataaggtgttcaacctttactattttatccgatgtaggacatataactcacacttgcacacaaca 5389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 567 - 679
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||||||||||| || |||||||||||| ||||||||||||||| | ||||| ||||||||| || |||||||||||    
T  567 actcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatataactcaca 666  T
Q  117 cttgtacacaaca 129  Q
    ||||| |||||||    
T  667 cttgtgcacaaca 679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 234 - 298
Alignment:
Q  57 ctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttg 120  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||||||||    
T  234 ctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttg 298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 2e-26; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 4955368 - 4955480
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| ||||| | ||||||||||||||||||||| |||||||||||| ||||||||||||| | ||||||||||||| || ||  |||||||||||    
T  4955368 actcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaaccttaactattttatccgatatgagacatataactcaca 4955467  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  4955468 cttgcacacaaca 4955480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 34646700 - 34646812
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||| |||||||||| |||||| ||||| |||||||||| |||| | ||||||||||||||| || |||||||||||    
T  34646700 actcttacccaaaaccttaaggcaatgagtttatgagtcctcttagttataaggtgttcaacatttactgttttatccgatgtgggacatataactcaca 34646799  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  34646800 cttgtacacaaca 34646812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 41707516 - 41707627
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||| ||||| ||||||| ||||| ||||||||||||||||||||||||| | ||||||||||||||| || |||||||||||    
T  41707516 actcttac-caaaaccttaagacaatgagtttatgggttcttttacttatatggtgttcaacctttactcttttatccgatgtgggacatataactcaca 41707614  T
Q  117 cttgtacacaaca 129  Q
    |||||||||||||    
T  41707615 cttgtacacaaca 41707627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 52884975 - 52884880
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    ||||||||||||||||||  | |||||||||||| ||||||||||||||| ||||||||||||||||| || ||||||||||||||| ||||||||    
T  52884975 taaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaaca 52884880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 54109017 - 54108908
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaactataactcacac 117  Q
    |||||||| ||||| | |||||||||||||||||| || |||||||||||| ||||||||||||||| ||||||||||||||||| || |||||| ||||    
T  54109017 actcttacccaaaa-cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggac-ataactgacac 54108920  T
Q  118 ttgtacacaaca 129  Q
    ||| ||||||||    
T  54108919 ttgcacacaaca 54108908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 54936301 - 54936193
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaactataactcacac 117  Q
    |||||||| ||||| | |||||||||||||||||| || |||||||||| | ||||||||||||||| ||||||||| |||||||    |||||||||||    
T  54936301 actcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtgg---gataactcacac 54936205  T
Q  118 ttgtacacaaca 129  Q
    ||||||||||||    
T  54936204 ttgtacacaaca 54936193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 25483441 - 25483329
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| ||||| | ||||||||||||||||||  | |||||||||||| | ||||||||||||| |||||||||||||||| ||  |||||||||||    
T  25483441 actcttacccaaaaccttaaggcaatgggtttatggatcctcttacttataagatgttcaacctttactattttatccgatgtgagacatataactcaca 25483342  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  25483341 cttgcacacaaca 25483329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 45489409 - 45489494
Alignment:
Q  45 ggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaaca 129  Q
    |||||| ||||||||||||||||||||||||||||||||| | |||||||||||||| ||  ||||| ||||||||||||||||||    
T  45489409 ggtttaagagttctcttacttatatggtgttcaacctttactcttttatccgatgtgagacatataattcacacttgtacacaaca 45489494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 20825941 - 20825829
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||| |  |||||||| || |||||| ||||| ||||||||||||||| | |||||||||||||||||| |||||||||||    
T  20825941 actcttacccaaaaccttaaggctaaaggtttatgggtgctcttatttataaggtgttcaacctttactcttttatccgatgtggaacatataactcaca 20825842  T
Q  117 cttgtacacaaca 129  Q
     ||||||||||||    
T  20825841 tttgtacacaaca 20825829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 44620458 - 44620362
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactc 113  Q
    |||||||| ||||| | |||||||||||||||||| | ||||||| ||||| ||||||||||||||| | |||||||||||||||||| ||||||||    
T  44620458 actcttacccaaaaccttaaggcaatgggtttatgggctctcttatttataaggtgttcaacctttactgttttatccgatgtggaacatataactc 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 52884783 - 52884687
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaacag 130  Q
    |||||||||||||||||   |  ||||||||||| ||||||||||||||| ||||||||||||||||| || ||||||||||||||| |||||||||    
T  52884783 taaggcaatgggtttatcgatcatcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacag 52884687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 50630806 - 50630909
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcaca 116  Q
    |||||||| ||||| | |||||||||||||||||| || ||||||||||||  |||||||||||||| ||||||||||||||| |||  ||||||||||     
T  50630806 actcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataatgtgttcaacctttactattttatccgatgtaggacatataactcacg 50630905  T
Q  117 cttg 120  Q
    ||||    
T  50630906 cttg 50630909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 55933175 - 55933278
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcaca 116  Q
    |||||||| |||||   |||||||||||||||||| || |||||||||||| ||||||||||| ||| ||||||||||||||| |||  |||||||||||    
T  55933175 actcttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacccttactattttatccgatgtaggacatataactcaca 55933274  T
Q  117 cttg 120  Q
    ||||    
T  55933275 cttg 55933278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 22028014 - 22028124
Alignment:
Q  20 tcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacact 118  Q
    |||||| ||||| | |||||||||  ||||||| || |||||||||||| ||||||||||||||  ||||||||||||||||| || ||||| |||||||    
T  22028014 tcttacccaaaaccttaaggcaatatgtttatgggtcctcttacttataaggtgttcaacctttcgtattttatccgatgtgggacatataagtcacact 22028113  T
Q  119 tgtacacaaca 129  Q
    || ||||||||    
T  22028114 tgcacacaaca 22028124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 36572126 - 36572012
Alignment:
Q  16 atactcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactca 114  Q
    ||||||| || ||||| | ||||||||||| |||||| ||  ||||||||||| |||||||||| |||| | |||||| |||||||| || |||||||||    
T  36572126 atactctaacccaaaaccttaaggcaatggatttatgggtcttcttacttataaggtgttcaacatttactcttttattcgatgtgggacatataactca 36572027  T
Q  115 cacttgtacacaaca 129  Q
    |||||||||||||||    
T  36572026 cacttgtacacaaca 36572012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 49880264 - 49880162
Alignment:
Q  19 ctcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacac 117  Q
    ||||||| ||||| | ||||||| |||||||||| || |||||||||||| ||||||||||||||| |||||||| | |||||| || ||||||||||||    
T  49880264 ctcttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgttcaacctttactattttattcaatgtgggacatataactcacac 49880165  T
Q  118 ttg 120  Q
    |||    
T  49880164 ttg 49880162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 10246024 - 10245913
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||||  |||||||||| || |||||||||||| ||||||||||||||| | |||||||||||||||  | |||||||||||    
T  10246024 actcttacccaaaaccttaaggctttgggtttatg-gtcctcttacttataaggtgttcaacctttactcttttatccgatgtggggcatataactcaca 10245926  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  10245925 cttgcacacaaca 10245913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 20826322 - 20826210
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    ||||||||  |||||  |||||| ||||||||||| |||||||||||||||  ||||||||| |||| ||||||||||||||||| || |||||||||||    
T  20826322 actcttacctaaaatgttaaggctatgggtttatgggttctcttacttataacgtgttcaacttttactattttatccgatgtgggacatataactcaca 20826223  T
Q  117 cttgtacacaaca 129  Q
     || |||| ||||    
T  20826222 tttctacataaca 20826210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 36629342 - 36629230
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||| ||||||| || |||||||||||| |||||| ||| |||| | || |||||||||||| || |||||||||||    
T  36629342 actcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgtttaacttttacttttctatccgatgtgggacatataactcaca 36629243  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  36629242 cttgaacacaaca 36629230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 54017646 - 54017754
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    ||||||||  |||| | |||||||||||||||||| || |||||||||||| | ||||||||||||| ||||||||| || |||| || |||||||||||    
T  54017646 actcttacctaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatctgacgtgggacatataactcaca 54017745  T
Q  117 cttgtacac 125  Q
    |||| ||||    
T  54017746 cttgcacac 54017754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 39404486 - 39404391
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||||| || |||||||| || |||||||||||| ||||||| ||||||| | ||||||| ||||||| || ||||||||||||||||||||||||    
T  39404486 taaggctataggtttatgggtcctcttacttataaggtgttccacctttactcttttatctgatgtgggacatataactcacacttgtacacaaca 39404391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 41370462 - 41370359
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| |||||   |||||||||||||||||| || |||||||||||| ||| |||||| |||| ||||||||||||| ||| || |||||||||||    
T  41370462 actcttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggttttcaacatttactattttatccgatttgggacatataactcaca 41370363  T
Q  117 cttg 120  Q
    ||||    
T  41370362 cttg 41370359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 49076516 - 49076611
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    |||| ||||||||||||  || |||||||||||| ||||||||||||||| | ||||||||||| ||| || ||||||||||||||| ||||||||    
T  49076516 taagacaatgggtttataggtcctcttacttataaggtgttcaacctttactgttttatccgatatggtacatataactcacacttgcacacaaca 49076611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 50459803 - 50459724
Alignment:
Q  41 aatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacactt 119  Q
    ||||||||||||||| |||||||||||| | ||||||||||||| | ||||| |||||||||||| ||||||||||||||    
T  50459803 aatgggtttatgagtcctcttacttataagatgttcaacctttactcttttaaccgatgtggaacatataactcacactt 50459724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 1731698 - 1731810
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||||||| |||||||| || |||||| ||||| | ||||||||||||| | ||||||| ||||||| || |||||||||||    
T  1731698 actcttacccaaaaccttaaggcaattggtttatgggtcctcttatttataagatgttcaacctttactgttttatctgatgtgggacatataactcaca 1731797  T
Q  117 cttgtacacaaca 129  Q
     ||| ||||||||    
T  1731798 tttgcacacaaca 1731810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 2740805 - 2740693
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    ||||||||  |||| | ||||||  |||||||||  || |||||||||||| ||||||||||||||| | || |||||||||||| || |||||||||||    
T  2740805 actcttacgtaaaaccttaaggctctgggtttataggtcctcttacttataaggtgttcaacctttactgttctatccgatgtgggacatataactcaca 2740706  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  2740705 cttgcacacaaca 2740693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 2741176 - 2741064
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||||  ||||| || |||||||||||| ||| ||||||||||| |||| |||| ||||||| || |||||||||||    
T  2741176 actcttacccaaaaccttaaggcaatggagttatgggtcctcttacttataaggtattcaacctttactattctatctgatgtgggacatataactcaca 2741077  T
Q  117 cttgtacacaaca 129  Q
    |||| ||| ||||    
T  2741076 cttgcacataaca 2741064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 16888867 - 16888970
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||| ||||| ||||||  ||||||||||||||| ||| ||||||||||| | || |||||||||||| || |||||||||||    
T  16888867 actcttacccaaaaccgtaagacaatgagtttataggttctcttacttataaggtattcaacctttacttttctatccgatgtgggacatataactcaca 16888966  T
Q  117 cttg 120  Q
    ||||    
T  16888967 cttg 16888970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 49076906 - 49076992
Alignment:
Q  42 atgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaac 128  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||| ||||||| || || |||||| ||||||||||||||| |||||||    
T  49076906 atgggtttatgggttctcttact-ataaggtgttcaacctttactattttagccaatatggaacatataactcacacttgcacacaac 49076992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 3340912 - 3340802
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | ||||||| |||||||||| || |||||||||||| |||| |||||||||| | ||| ||| |||| || || |||||||||||    
T  3340912 actcttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgctcaacctttactctttcatctgatgcgggacatataactcaca 3340813  T
Q  117 cttgtacacaa 127  Q
    |||| ||||||    
T  3340812 cttgcacacaa 3340802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 18932800 - 18932882
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt 100  Q
    ||||||||  |||| | |||||||||||||||||| || |||||| ||||| ||| ||||||||||| |||||||||||||||    
T  18932800 actcttacctaaaaccttaaggcaatgggtttatgggtcctcttatttataaggtattcaacctttactattttatccgatgt 18932882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 39404123 - 39404013
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcaca 116  Q
    |||||||| ||||| | ||| || ||| |||||||||| ||||||||||||  |||||||||||||| | |||||| | |||| |||  |||||||||||    
T  39404123 actcttacccaaaaccttaatgctatgagtttatgagtcctcttacttataaagtgttcaacctttactcttttattcaatgtaggacatataactcaca 39404024  T
Q  117 cttgtacacaa 127  Q
    |||||||||||    
T  39404023 cttgtacacaa 39404013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 44620363 - 44620289
Alignment:
Q  56 tctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    ||||||||||||| ||||||||||||||| |||||||||| |||||| || ||||||||| | ||||||||||||    
T  44620363 tctcttacttataaggtgttcaacctttactattttatcccatgtgggacatataactcatatttgtacacaaca 44620289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 39792911 - 39793024
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||| | |||||||||| ||||| |  | ||||| |||||| |||||||||| |||| | || |||| ||||||| || |||||||||||    
T  39792911 actcttacccaaaaccttaaggcaatgagtttacggttcctctttcttataaggtgttcaacatttacttttctatctgatgtgggacatataactcaca 39793010  T
Q  117 cttgtacacaacag 130  Q
    ||||||||||||||    
T  39793011 cttgtacacaacag 39793024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 22183315 - 22183427
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcaca 116  Q
    |||||||  ||||| | |||||||||||||||||| || || |||||||||   |||||||| |||| | ||||||||||||| |||  |||||||||||    
T  22183315 actcttatccaaaaccttaaggcaatgggtttatgggtccttttacttataaattgttcaacatttactcttttatccgatgtgggatatataactcaca 22183414  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  22183415 cttgcacacaaca 22183427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 36608712 - 36608824
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatg-tggaactataactcaca 116  Q
    |||||||| ||||| | |||| |||||| ||||||  | |||||||||||  |||||||||| |||| | |||||||||||| ||||  |||||||||||    
T  36608712 actcttacccaaaaccttaagacaatggatttatggatcctcttacttatgaggtgttcaacttttactcttttatccgatgttggacatataactcaca 36608811  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  36608812 cttgcacacaaca 36608824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 39599461 - 39599505
Alignment:
Q  156 ctcaaatttttatggttgccttcttctgcgctatcttccaccaaa 200  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  39599461 ctcaaatttttatggttgccttcttctgcactatcttccaccaaa 39599505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 128
Target Start/End: Complemental strand, 44620738 - 44620654
Alignment:
Q  45 ggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaac 128  Q
    |||||||| || ||||||||||||  ||||||||||| || ||||| ||||||||||| || ||||||||||||||| |||||||    
T  44620738 ggtttatgggtcctcttacttataaagtgttcaacctctactatttcatccgatgtgggacatataactcacacttgcacacaac 44620654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 44621107 - 44621023
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtgg 102  Q
    |||||||| ||||| | |||| ||||| ||||||| |  |||||||||||| ||||||||||||||| | |||||||||||||||    
T  44621107 actcttacccaaaaccttaagacaatgagtttatgtgccctcttacttataaggtgttcaacctttactgttttatccgatgtgg 44621023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 45496910 - 45496826
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtgg 102  Q
    |||||||| ||||| | |||| ||||| ||||||  || |||||||||||| |||||||||||||||  ||||||||||||||||    
T  45496910 actcttacccaaaaccttaagacaatgagtttataggtcctcttacttataaggtgttcaacctttacgattttatccgatgtgg 45496826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 50002531 - 50002419
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcaca 116  Q
    |||||||| ||||| | |||| |||||| |||||| || |||||||||| |  |||||||||||||| | |||||||||||||| ||  |||||||||||    
T  50002531 actcttacccaaaaccttaagacaatggatttatgggtcctcttacttaaaaagtgttcaacctttactcttttatccgatgtgagacatataactcaca 50002432  T
Q  117 cttgtacacaaca 129  Q
    |||| | ||||||    
T  50002431 cttgcaaacaaca 50002419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 3244519 - 3244614
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaaca 129  Q
    |||| ||||| ||||||| || |||||||||||| | ||||||||||||| | || ||||||||||| ||  ||||||||||||||| ||||||||    
T  3244519 taagacaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtgagacatataactcacacttgcacacaaca 3244614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 6975507 - 6975590
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg 101  Q
    |||||||| ||||||| ||||  ||||| ||||||||| |||||||||||| | | ||||||||||| ||||||||| ||||||    
T  6975507 actcttacccaaaatcttaagataatggatttatgagtcctcttacttataagatattcaacctttactattttatcggatgtg 6975590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 49303011 - 49302907
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttac--ttatatggtgttcaacctttattattttatccgatgtggaac-tataactca 114  Q
    |||||||| ||||| | |||||||||||||||||| || |||||||  ||||| | ||||||||||||| | ||||||  ||||||| || |||||||||    
T  49303011 actcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttttataagatgttcaacctttacttttttatttgatgtgggacatataactca 49302912  T
Q  115 cactt 119  Q
    |||||    
T  49302911 cactt 49302907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 54343091 - 54343136
Alignment:
Q  57 ctcttacttatatggtgttcaacctttattattttatccgatgtgg 102  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||    
T  54343091 ctcttacttataaggtgttcaacctttactattttatccgatgtgg 54343136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 3341233 - 3341121
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcaca 116  Q
    |||||||| ||||||| |||  |||||   ||||| || ||||||||||||  ||||| |||||||| | |||||||| |||||| || |||||||||||    
T  3341233 actcttacccaaaatcttaaaacaatgatgttatgggtcctcttacttataaagtgtttaacctttactcttttatccaatgtgggacatataactcaca 3341134  T
Q  117 cttgtacacaaca 129  Q
    |||| ||||||||    
T  3341133 cttgcacacaaca 3341121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 3700438 - 3700358
Alignment:
Q  50 atgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcacacttgtacacaaca 129  Q
    |||||| || ||||||||| |||||||||| |||| | ||||||||||||| |||  ||||||||||||||| ||||||||    
T  3700438 atgagtccttttacttataaggtgttcaacatttactcttttatccgatgtaggacatataactcacacttgcacacaaca 3700358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 32941174 - 32941286
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcaca 116  Q
    |||||||| ||||| | |||||||||| |||||||||  |||||| ||||| ||||||||||||||| | || | ||||||||  ||  |||||||||||    
T  32941174 actcttacccaaaaccttaaggcaatgagtttatgagccctcttatttataaggtgttcaacctttactgttctttccgatgtaagacatataactcaca 32941273  T
Q  117 cttgtacacaaca 129  Q
    |||| | ||||||    
T  32941274 cttgcagacaaca 32941286  T

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Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 54017753 - 54017837
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtgg 102  Q
    ||||||||  |||| | |||| |||||||  |||| || |||||||||||| ||||||||||||||| | |||||||||||||||    
T  54017753 actcttacctaaaaccttaagacaatgggaatatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgg 54017837  T

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Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 54741268 - 54741342
Alignment:
Q  57 ctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaacag 130  Q
    |||||||||||| ||||||||||||||| | || ||||||||||| ||  ||||| ||||||||| |||||||||    
T  54741268 ctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataattcacacttgcacacaacag 54741342  T

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Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 4390191 - 4390264
Alignment:
Q  57 ctcttacttatatggtgttcaacctttattattttatccgatgt-ggaactataactcacacttgtacacaaca 129  Q
    |||||||||||| ||||||||||||||| | ||||||| ||||| |||  | ||||||||||||| ||||||||    
T  4390191 ctcttacttataaggtgttcaacctttactcttttatctgatgtgggatatgtaactcacacttgcacacaaca 4390264  T

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Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 16889585 - 16889690
Alignment:
Q  16 atactcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactca 114  Q
    |||||||||| |||||   ||||||| | ||||||||| | |||||||||||| ||| ||||||||||| | || |||||||| || ||  |||||||||    
T  16889585 atactcttacccaaaactttaaggcagtaggtttatgaatcctcttacttataaggtattcaacctttacttttctatccgatttgagacatataactca 16889684  T
Q  115 cacttg 120  Q
    ||||||    
T  16889685 cacttg 16889690  T

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Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 44621493 - 44621420
Alignment:
Q  56 tctcttacttatatggtgttcaacctttattattttatccgatg-tggaactataactcacacttgtacacaac 128  Q
    ||||||||||||| |||||| |||||||| | |||||||| ||| ||||  ||||||||||||||| |||||||    
T  44621493 tctcttacttataaggtgtttaacctttactgttttatcccatgttggacatataactcacacttgcacacaac 44621420  T

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Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 54108612 - 54108540
Alignment:
Q  47 tttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaactataactcacacttg 120  Q
    |||||| || || ||||||||| ||||||||||||||| |||||||||| || ||| || ||||||||||||||    
T  54108612 tttatgggtccttttacttataaggtgttcaacctttactattttatcctatatgggac-ataactcacacttg 54108540  T

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Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 10246435 - 10246339
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaacag 130  Q
    |||||| ||||||||||| || |||| ||||||| | ||||||||||||| | ||||||||||| || ||  ||||||  ||||||| |||||||||    
T  10246435 taaggctatgggtttatgggtcctctaacttataagatgttcaacctttactcttttatccgatttgagacatataacagacacttgcacacaacag 10246339  T

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Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 44621012 - 44620937
Alignment:
Q  56 tctcttacttatatggtgttcaacctttattattttatccgatgt--ggaactataactcacacttgtacacaaca 129  Q
    ||||||||||||| |||||||||||||||   |||||||||||||  |||  | |||||||||||||| |||||||    
T  44621012 tctcttacttataaggtgttcaacctttacagttttatccgatgttgggacatctaactcacacttgtccacaaca 44620937  T

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Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 129
Target Start/End: Complemental strand, 19504757 - 19504698
Alignment:
Q  71 gtgttcaacctttattattttatccgatgtggaac-tataactcacacttgtacacaaca 129  Q
    ||||||||| |||| ||||||||||||| ||| || ||||||||| ||||||||||||||    
T  19504757 gtgttcaacttttactattttatccgatatgggacatataactcatacttgtacacaaca 19504698  T

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Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 22028420 - 22028534
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaaccttta--ttattttatccgatgt-ggaactataactca 114  Q
    |||||||| |||||   |||| ||||| ||||||| || |||||||| ||| |||||||||||||||  || ||||||||||||| |||  ||||| | |    
T  22028420 actcttacccaaaacattaagacaatgagtttatgggtcctcttactaataaggtgttcaacctttatttttttttatccgatgtaggacatataagtaa 22028519  T
Q  115 cacttgtacacaaca 129  Q
    |||||| ||||||||    
T  22028520 cacttgcacacaaca 22028534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 3271892 - 3271842
Alignment:
Q  18 actcttactcaaaatcataaggcaatgggtttatgagttctcttacttata 68  Q
    |||||||| ||||| | ||||||||| |||||||| |||||||||||||||    
T  3271892 actcttacccaaaaccttaaggcaataggtttatgggttctcttacttata 3271842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 50788087 - 50788137
Alignment:
Q  71 gtgttcaacctttattattttatccgatgtggaac-tataactcacacttg 120  Q
    |||||||||||||| ||||||||||||||||| || ||||||| |||||||    
T  50788087 gtgttcaacctttactattttatccgatgtgggacatataacttacacttg 50788137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 48111766 - 48111835
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaa 104  Q
    ||||| ||||| ||||| ||| || |||||||||  |||||||||||||| | |||||||||| ||||||    
T  48111766 taaggtaatggatttataagtccttttacttataatgtgttcaacctttactcttttatccgaggtggaa 48111835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 51768110 - 51768223
Alignment:
Q  17 tactcttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtggaac-tataactcac 115  Q
    |||| |||| ||||| | |||| ||||| |||||||||| |||||| ||||| |||||||||| |||| | || ||| |||| | | || ||||||||||    
T  51768110 tacttttacccaaaaccttaagacaatgagtttatgagtcctcttatttataaggtgttcaacatttactcttatattcgatataggacatataactcac 51768209  T
Q  116 acttgtacacaaca 129  Q
    | ||| ||||||||    
T  51768210 atttgcacacaaca 51768223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 34004658 - 34004749
Alignment:
Q  41 aatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaacagtg 132  Q
    |||| ||||||| || |||||||||||| | ||||||||||||| | |||||||  ||||| ||  ||||||||||||||| |||||| ||||    
T  34004658 aatgagtttatgggtcctcttacttataagttgttcaacctttagt-ttttatcatatgtgtgacatataactcacacttgcacacaatagtg 34004749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 40067145 - 40067041
Alignment:
Q  22 ttactcaaaatcataaggcaatgggtttatgagttctcttacttatatggtgttcaacctttatta-ttttatccgatgtggaac-tataactcacactt 119  Q
    |||| ||||||| ||||| | ||| | |||| || ||||||||||||  ||||||||| |||   | ||||||||||||| |||| ||||||||||||||    
T  40067145 ttacccaaaatcttaaggtagtggatctatgtgtcctcttacttataatgtgttcaactttttacacttttatccgatgtagaacatataactcacactt 40067046  T
Q  120 gtaca 124  Q
    |||||    
T  40067045 gtaca 40067041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 17526 - 17621
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaaca 129  Q
    |||||| ||||||||||| || |||||||||| | ||||||||||||||| ||||||||| |||||| ||  ||||||||||||||| ||||||||    
T  17526 taaggctatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtgtgacatataactcacacttgcacacaaca 17621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 47448 - 47382
Alignment:
Q  35 taaggcaatgggtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg 101  Q
    ||||||||||||||||||  |||||||||||||| ||||||||| ||||| ||||||||| ||||||    
T  47448 taaggcaatgggtttatggattctcttacttataaggtgttcaaactttactattttatcggatgtg 47382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 10192 - 10276
Alignment:
Q  46 gtttatgagttctcttacttatatggtgttcaacctttattattttatccgatgtg-gaactataactcacacttgtacacaaca 129  Q
    ||||||| || |||||||||||| |||||||||| ||||  ||||||||||||||| ||  |||||||||||||||| |||||||    
T  10192 gtttatgggtcctcttacttataaggtgttcaacttttaccattttatccgatgtgagacatataactcacacttgtgcacaaca 10276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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