View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19485_low_11 (Length: 468)
Name: NF19485_low_11
Description: NF19485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19485_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 295; Significance: 1e-165; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 155 - 453
Target Start/End: Complemental strand, 33298168 - 33297870
Alignment:
| Q |
155 |
gaaacgttgtgcataccatttgagctggattgaggtggcaaaccccgttgactttgtggtccaaggccatgacccaattggaaagtatgagacttgatga |
254 |
Q |
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| T |
33298168 |
gaaacgttgtgcataccatttgagctggattgaggtggcaaaccccgttgactttgtggtccaaggccatgacccaattggaaagtatgagacttgatga |
33298069 |
T |
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| Q |
255 |
actcagaatgattgttgtgtaaggtattggttaagtgaggggttcgagaaggaagaatgaaatttggagatgatgatttgaagttaataagagtggattg |
354 |
Q |
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| T |
33298068 |
actcagaatgattgttgtgtaaggtattggttaagtgaggggttggagaaggaagaatgaaatttggagatgatgatttgaagttaataagagtggattg |
33297969 |
T |
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| Q |
355 |
ttggttgttatgttgatgatggtgtgtgaagatgattgaggtatagtaaacatagaagagaatggaaagtgaggttaatagagctaaggtagttggaat |
453 |
Q |
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| T |
33297968 |
ttggttgttatgttgatgatggtgtgtgaagatgattgaggtatagtaaacatagaagagaatggaaagtgaggttaatagagctaaggtagttggaat |
33297870 |
T |
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