View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19486_high_34 (Length: 299)
Name: NF19486_high_34
Description: NF19486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19486_high_34 |
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Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 10 - 240
Target Start/End: Original strand, 7012234 - 7012464
Alignment:
| Q |
10 |
attattctgagttgaagtatttactttcattatatctaccttcacaatgtggtgatcagaagttcctttagaagaaattactgagtatgaccctggaaca |
109 |
Q |
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| T |
7012234 |
attattctgagttgaagtatttactttcattatatctaccttcacaatgtggtgatcagaagttcctttagaagaaattactgagtatgaccctggaaca |
7012333 |
T |
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| Q |
110 |
aatttgtatggtgattttgatgaacccaaaatataatccacccttgttccatacttgcatgtcccctgcacatctatattcaacaattcacattaaagtt |
209 |
Q |
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| T |
7012334 |
aatttgtatggtgattttgatgaacccaaaatataatccacccttgttccatacttgcatgtcccctgcacatctatattcaacaattcacattaaagtt |
7012433 |
T |
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| Q |
210 |
tgaactcatttagaaaaataagtttgaaaat |
240 |
Q |
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| T |
7012434 |
tgaactcatttagaaaaataagtttgaaaat |
7012464 |
T |
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