View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19486_high_37 (Length: 241)
Name: NF19486_high_37
Description: NF19486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19486_high_37 |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 44519708 - 44519483
Alignment:
| Q |
1 |
catcaactccactttttaaatgttttatcatgccagcatggctctgttttatgactttgatcatgatcaaagatactttgtttgttattttattttaagg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44519708 |
catcaactccactttttaaatgttttatcatgccagcatggctctgttttatgactttgatcatgatcaaagatactttgtttgttattttattttaagg |
44519609 |
T |
|
| Q |
101 |
tatgtggctcaggggaaagggatcttgcaacctcacaatttgattgatgagcttgaaaacatccttggtcaggaggatcatcttaaagatggcccctttg |
200 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44519608 |
tatgtggctcaggggaaagggatcttgcaacctcataatttgattgatgagcttgaaaacatccttggtcaggaggatcatcttaaagatggcccctttg |
44519509 |
T |
|
| Q |
201 |
gtgaaattatcaagtctgcacaggtt |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
44519508 |
gtgaaattatcaagtctgcacaggtt |
44519483 |
T |
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