View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19486_low_30 (Length: 309)
Name: NF19486_low_30
Description: NF19486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19486_low_30 |
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Alignment Details
Target: chr4 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 47101497 - 47101779
Alignment:
| Q |
1 |
attaccaagaaaaactatatatttgtctataattctatccctaagtgctagggatcaatttccattcttttctcacttggatcctctagggttaggtttt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
47101497 |
attaccaagaaaaactatatatttgtctataattctatccctaagtgctagggatcaatttccattcttttc--acttggatcctctagggttaggtttt |
47101594 |
T |
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| Q |
101 |
accttgcaacaagccgttcgattaatggatctctcttattataatgacatatacaaatagctatcatgccgccacaccatgaaagcacaccgtagagggt |
200 |
Q |
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|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
47101595 |
accttgcaacaagccgttagattaatggatctctcttaatataatgacatatacaaatagctatcatgccgccacaccatgaaagcacaccatagagggt |
47101694 |
T |
|
| Q |
201 |
ccattgaaggactatattatatatgtgcacatcattttgaatttgacaaaattaaccataattttcttgatttggacaaactgat |
285 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47101695 |
ccattgaaggactatattatatatgtgcacatcattttgaatttgacaaaattaaccataattttcttgatttggacaaactgat |
47101779 |
T |
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