View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19487_low_15 (Length: 265)

Name: NF19487_low_15
Description: NF19487
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19487_low_15
NF19487_low_15
[»] chr5 (6 HSPs)
chr5 (1-247)||(12517145-12517392)
chr5 (1-135)||(11845165-11845303)
chr5 (188-247)||(17904319-17904379)
chr5 (188-244)||(35470079-35470136)
chr5 (6-51)||(11855534-11855579)
chr5 (189-248)||(35563116-35563176)
[»] chr6 (1 HSPs)
chr6 (197-247)||(32604555-32604606)
[»] chr3 (10 HSPs)
chr3 (193-247)||(33640996-33641051)
chr3 (189-247)||(33967942-33968001)
chr3 (189-248)||(34819739-34819799)
chr3 (188-247)||(50302975-50303035)
chr3 (197-248)||(28309469-28309520)
chr3 (189-246)||(28958622-28958680)
chr3 (189-236)||(21758272-21758319)
chr3 (189-247)||(47068887-47068946)
chr3 (188-246)||(55406934-55406993)
chr3 (189-248)||(47068774-47068834)
[»] chr7 (4 HSPs)
chr7 (189-247)||(23031785-23031844)
chr7 (189-247)||(3399231-3399290)
chr7 (189-247)||(36783278-36783337)
chr7 (192-241)||(2457973-2458023)
[»] chr4 (4 HSPs)
chr4 (189-247)||(19594463-19594522)
chr4 (189-247)||(6942261-6942320)
chr4 (188-247)||(40293578-40293638)
chr4 (192-247)||(48818495-48818551)
[»] chr1 (10 HSPs)
chr1 (189-247)||(12570107-12570166)
chr1 (188-239)||(23452975-23453027)
chr1 (189-236)||(47449230-47449278)
chr1 (201-247)||(13383047-13383094)
chr1 (188-246)||(14149472-14149531)
chr1 (192-246)||(36438429-36438484)
chr1 (192-247)||(21008239-21008295)
chr1 (197-248)||(47446017-47446069)
chr1 (189-236)||(47949992-47950040)
chr1 (188-247)||(50075629-50075689)
[»] chr2 (3 HSPs)
chr2 (189-238)||(35813791-35813841)
chr2 (193-247)||(28226217-28226272)
chr2 (189-247)||(43592738-43592797)
[»] chr8 (3 HSPs)
chr8 (197-247)||(33274309-33274360)
chr8 (189-247)||(40330141-40330200)
chr8 (188-247)||(12892646-12892706)


Alignment Details
Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 12517392 - 12517145
Alignment:
Q  1 gtggcttttcaacgcaaatgctgaacaagaacatagccctaaagggtcaacaggtaggactctagtagtactagtagtaaatattttcagagtaaaagtg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12517392 gtggcttttcaacgcaaatgctgaacaagaacatagccctaaagggtcaacaggtaggactctagtagtactagtagtaaatattttcagagtaaaagtg 12517293  T
Q  101 cttgaaataactcttcaattcacaggctttaattgnnnnnnnncaaccattcattttattattgagttttagatttaatgaaaatgttaagataaggatc 200  Q
    |||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12517292 cttgaaataactcttcaattcacaggctttaattgaaaaaaaccaaccattcattttattattgagttttagatttaaggaaaatgttaagataaggatc 12517193  T
Q  201 ttaaaatagaaat-aacaataaatattgtattgaaaatataaattttt 247  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  12517192 ttaaaatagaaataaacaataaatattttattgaaaatataaattttt 12517145  T

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Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 11845165 - 11845303
Alignment:
Q  1 gtggcttttcaacgcaaatgctgaacaagaacatagccctaaagggtcaacaggtaggac----tctagtagtactagtagtaaatattttcagagtaaa 96  Q
    |||||| ||||||| |||||| ||||||| ||| |||| ||||||||||| |||||| |     |  ||||||||||||||||||||| ||||||||| |    
T  11845165 gtggctcttcaacgtaaatgcagaacaaggacaaagccataaagggtcaataggtagtaagtagtacagtagtactagtagtaaatatcttcagagtaca 11845264  T
Q  97 agtgcttgaaataactcttcaattcacaggctttaattg 135  Q
    |  ||||||| |||||||||| |||||||||||||||||    
T  11845265 atcgcttgaagtaactcttcagttcacaggctttaattg 11845303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 247
Target Start/End: Original strand, 17904319 - 17904379
Alignment:
Q  188 taagataaggatcttaaaatagaaataa-caataaatattgtattgaaaatataaattttt 247  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||||||||| ||||||||||    
T  17904319 taagataaggatcttaaaatagaattaaacaataaaaattgtattgaaaagataaattttt 17904379  T

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Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 35470079 - 35470136
Alignment:
Q  188 taagataaggatcttaaaatagaaataa-caataaatattgtattgaaaatataaatt 244  Q
    ||||||||| |||||||||||||| ||| |||||| |||||||||||||| |||||||    
T  35470079 taagataagaatcttaaaatagaattaaacaataagtattgtattgaaaagataaatt 35470136  T

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Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 11855534 - 11855579
Alignment:
Q  6 ttttcaacgcaaatgctgaacaagaacatagccctaaagggtcaac 51  Q
    |||||||||||||||| ||||||||||| |||| ||||| ||||||    
T  11855534 ttttcaacgcaaatgcagaacaagaacacagccataaagagtcaac 11855579  T

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Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 35563176 - 35563116
Alignment:
Q  189 aagataaggatcttaaaatagaaataac-aataaatattgtattgaaaatataaatttttt 248  Q
    ||||||| ||||||||||||||| |||  ||||||||||  ||||||||||||| ||||||    
T  35563176 aagataaagatcttaaaatagaattaaataataaatattacattgaaaatataagtttttt 35563116  T

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Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 32604606 - 32604555
Alignment:
Q  197 gatcttaaaatagaaataa-caataaatattgtattgaaaatataaattttt 247  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32604606 gatcttaaaatagaaataaacaataaatattgtattgaaaatataaattttt 32604555  T

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Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 33641051 - 33640996
Alignment:
Q  193 taaggatcttaaaatagaaataa-caataaatattgtattgaaaatataaattttt 247  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||    
T  33641051 taaggatcttaaaatagaattaaacaataaatattgtattgaaaatataagttttt 33640996  T

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Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 33967942 - 33968001
Alignment:
Q  189 aagataaggatcttaaaatagaaataa-caataaatattgtattgaaaatataaattttt 247  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||    
T  33967942 aagataaggatcttataatagaaataaacaataaatattgtattaaaaatataacttttt 33968001  T

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Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 34819739 - 34819799
Alignment:
Q  189 aagataaggatcttaaaatagaaataa-caataaatattgtattgaaaatataaatttttt 248  Q
    |||||||| |||||||||||||| ||| ||||||| ||||||||||||| |||||||||||    
T  34819739 aagataagaatcttaaaatagaattaaacaataaaaattgtattgaaaagataaatttttt 34819799  T

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Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 247
Target Start/End: Original strand, 50302975 - 50303035
Alignment:
Q  188 taagataaggatcttaaaatagaaataa-caataaatattgtattgaaaatataaattttt 247  Q
    ||||||||  ||||||||||||||| || |||||||||||||||||||||||||| |||||    
T  50302975 taagataaatatcttaaaatagaaacaaacaataaatattgtattgaaaatataagttttt 50303035  T

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Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 248
Target Start/End: Original strand, 28309469 - 28309520
Alignment:
Q  197 gatcttaaaatagaaataacaataaatattgtattgaaaatataaatttttt 248  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||| ||||||    
T  28309469 gatcttaaaatagaactaaaaataaatattgtattgaaaaaataagtttttt 28309520  T

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Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 28958680 - 28958622
Alignment:
Q  189 aagataaggatcttaaaatagaaataa-caataaatattgtattgaaaatataaatttt 246  Q
    |||||||||||||||||| |||| ||| |||||| |||||||||||||| |||||||||    
T  28958680 aagataaggatcttaaaacagaagtaaacaataattattgtattgaaaagataaatttt 28958622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 21758272 - 21758319
Alignment:
Q  189 aagataaggatcttaaaatagaaataacaataaatattgtattgaaaa 236  Q
    |||||||| |||||||||||||| ||| ||||||||||||||| ||||    
T  21758272 aagataagaatcttaaaatagaattaataataaatattgtattaaaaa 21758319  T

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Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 47068887 - 47068946
Alignment:
Q  189 aagataaggatcttaaaatagaaat-aacaataaatattgtattgaaaatataaattttt 247  Q
    ||||||||||||||| ||||||||| || ||||||||||||||| |||| |||| |||||    
T  47068887 aagataaggatcttagaatagaaatcaataataaatattgtattaaaaagataatttttt 47068946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 55406993 - 55406934
Alignment:
Q  188 taagataaggatcttaaaatagaaat-aacaataaatattgtattgaaaatataaatttt 246  Q
    |||||||||||||||||||||||| | |||| |||||||||||||| ||| |||| ||||    
T  55406993 taagataaggatcttaaaatagaattaaacactaaatattgtattggaaaaataagtttt 55406934  T

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Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 47068774 - 47068834
Alignment:
Q  189 aagataaggatcttaaaatagaaat-aacaataaatattgtattgaaaatataaatttttt 248  Q
    ||||||||||||||| ||||||||| || |||||||||| |||| |||| |||| ||||||    
T  47068774 aagataaggatcttagaatagaaataaataataaatattatattaaaaagataattttttt 47068834  T

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Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 23031844 - 23031785
Alignment:
Q  189 aagataaggatcttaaaatagaaat-aacaataaatattgtattgaaaatataaattttt 247  Q
    ||||||| ||||||||||||||| | |||||||||||||||||| |||| ||||||||||    
T  23031844 aagataatgatcttaaaatagaattgaacaataaatattgtattaaaaagataaattttt 23031785  T

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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 3399231 - 3399290
Alignment:
Q  189 aagataaggatcttaaaatagaaat-aacaataaatattgtattgaaaatataaattttt 247  Q
    ||||||||||||| ||||||||||| || ||||||||||| |||||||| |||| |||||    
T  3399231 aagataaggatctaaaaatagaaatgaaaaataaatattgcattgaaaacataagttttt 3399290  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 36783337 - 36783278
Alignment:
Q  189 aagataaggatcttaaaatagaaataac-aataaatattgtattgaaaatataaattttt 247  Q
    |||||||| |||||||||||||| |||  |||||||||||||||||||| |||| |||||    
T  36783337 aagataagaatcttaaaatagaattaaataataaatattgtattgaaaagataacttttt 36783278  T

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Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 2458023 - 2457973
Alignment:
Q  192 ataaggatcttaaaatagaaataa-caataaatattgtattgaaaatataa 241  Q
    |||||||||||||||||||| ||| |||| |||||||||||||||| ||||    
T  2458023 ataaggatcttaaaatagaattaaacaatcaatattgtattgaaaagataa 2457973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 19594522 - 19594463
Alignment:
Q  189 aagataaggatcttaaaatagaaata-acaataaatattgtattgaaaatataaattttt 247  Q
    |||||| |||||||||||||||| || |||||||||||||||||||||| |||| |||||    
T  19594522 aagatagggatcttaaaatagaattatacaataaatattgtattgaaaagataagttttt 19594463  T

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Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 6942320 - 6942261
Alignment:
Q  189 aagataaggatcttaaaatagaaataa-caataaatattgtattgaaaatataaattttt 247  Q
    ||||||| |||||||||||| || ||| ||||||||||||||||||||| |||| |||||    
T  6942320 aagataaagatcttaaaataaaattaaacaataaatattgtattgaaaagataagttttt 6942261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 247
Target Start/End: Original strand, 40293578 - 40293638
Alignment:
Q  188 taagataaggatcttaaaatagaaat-aacaataaatattgtattgaaaatataaattttt 247  Q
    |||||||| ||||||||||||||| | || |||||||||||  ||||||| ||||||||||    
T  40293578 taagataaagatcttaaaatagaattaaataataaatattgcgttgaaaagataaattttt 40293638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 48818551 - 48818495
Alignment:
Q  192 ataaggatcttaaaatagaaat-aacaataaatattgtattgaaaatataaattttt 247  Q
    |||||||||||||||||||| | ||||||||||| || |||||||| |||| |||||    
T  48818551 ataaggatcttaaaatagaattaaacaataaataatgcattgaaaagataagttttt 48818495  T

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Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 12570107 - 12570166
Alignment:
Q  189 aagataaggatcttaaaatagaaataa-caataaatattgtattgaaaatataaattttt 247  Q
    ||||||| |||||||||||||||| || |||||||||||||||| ||||||||| |||||    
T  12570107 aagataaagatcttaaaatagaaacaaacaataaatattgtattaaaaatataagttttt 12570166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 23453027 - 23452975
Alignment:
Q  188 taagataaggatcttaaaatagaa-ataacaataaatattgtattgaaaatat 239  Q
    |||||||| ||||||||||||||| | || |||||||||||||||||||||||    
T  23453027 taagataaagatcttaaaatagaataaaataataaatattgtattgaaaatat 23452975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 47449278 - 47449230
Alignment:
Q  189 aagataaggatcttaaaatagaaataac-aataaatattgtattgaaaa 236  Q
    |||||||| |||||||||||||| |||| ||||||||||||||||||||    
T  47449278 aagataagaatcttaaaatagaattaactaataaatattgtattgaaaa 47449230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 13383047 - 13383094
Alignment:
Q  201 ttaaaatagaaataa-caataaatattgtattgaaaatataaattttt 247  Q
    ||||||||||||||| |||||||||||||||| ||||||||| |||||    
T  13383047 ttaaaatagaaataaacaataaatattgtattaaaaatataagttttt 13383094  T

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Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 14149472 - 14149531
Alignment:
Q  188 taagataaggatcttaaaatagaaataa-caataaatattgtattgaaaatataaatttt 246  Q
    ||||||||| |||||||||||||| ||| |||||| |||||||||||||| | |||||||    
T  14149472 taagataagaatcttaaaatagaagtaaacaataattattgtattgaaaagaaaaatttt 14149531  T

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Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 36438484 - 36438429
Alignment:
Q  192 ataaggatcttaaaatagaaat-aacaataaatattgtattgaaaatataaatttt 246  Q
    |||||||||||||||||||| | || ||||||||||| ||||||||||||| ||||    
T  36438484 ataaggatcttaaaatagaatttaaaaataaatattgcattgaaaatataagtttt 36438429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 21008295 - 21008239
Alignment:
Q  192 ataaggatcttaaaatagaaataac-aataaatattgtattgaaaatataaattttt 247  Q
    ||||| |||||||||||||| |||  |||||||||||||||||||| |||| |||||    
T  21008295 ataagaatcttaaaatagaattaaataataaatattgtattgaaaagataacttttt 21008239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 248
Target Start/End: Complemental strand, 47446069 - 47446017
Alignment:
Q  197 gatcttaaaatagaaataac-aataaatattgtattgaaaatataaatttttt 248  Q
    ||||| ||||||||| |||  |||||||||||||||||||| |||||||||||    
T  47446069 gatctaaaaatagaattaaataataaatattgtattgaaaagataaatttttt 47446017  T

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Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 47949992 - 47950040
Alignment:
Q  189 aagataaggatcttaaaatagaaat-aacaataaatattgtattgaaaa 236  Q
    ||||||||||||||||||||||| | || ||||||||||| ||||||||    
T  47949992 aagataaggatcttaaaatagaattaaaaaataaatattgcattgaaaa 47950040  T

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Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 50075689 - 50075629
Alignment:
Q  188 taagataaggatcttaaaatagaaat-aacaataaatattgtattgaaaatataaattttt 247  Q
    |||||||| ||| ||||||||||||| ||||||||||||||  ||||||| |||| |||||    
T  50075689 taagataaagattttaaaatagaaataaacaataaatattgcgttgaaaagataacttttt 50075629  T

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Target: chr2 (Bit Score: 35; Significance: 0.00000000009; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 35813791 - 35813841
Alignment:
Q  189 aagataaggatcttaaaatagaaat-aacaataaatattgtattgaaaata 238  Q
    ||||||| ||||||||||||||||| ||||||||||||| |||||||||||    
T  35813791 aagataaagatcttaaaatagaaataaacaataaatattatattgaaaata 35813841  T

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Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 28226272 - 28226217
Alignment:
Q  193 taaggatcttaaaatagaaataa-caataaatattgtattgaaaatataaattttt 247  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||||| |||| |||||    
T  28226272 taaggatcttaaaatagaattaaacaataaatattatattgaaaagataagttttt 28226217  T

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Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 43592797 - 43592738
Alignment:
Q  189 aagataaggatcttaaaatagaaataa-caataaatattgtattgaaaatataaattttt 247  Q
    ||||||| |||||||||||||||  || ||||||||||||||||||||| |||| |||||    
T  43592797 aagataaagatcttaaaatagaatgaaacaataaatattgtattgaaaagataagttttt 43592738  T

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Target: chr8 (Bit Score: 32; Significance: 0.000000006; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 33274360 - 33274309
Alignment:
Q  197 gatcttaaaatagaaataac-aataaatattgtattgaaaatataaattttt 247  Q
    |||||||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  33274360 gatcttaaaatagaaataaataataaatattgcattgaaaagataaattttt 33274309  T

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Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 40330141 - 40330200
Alignment:
Q  189 aagataaggatcttaaaatagaaataac-aataaatattgtattgaaaatataaattttt 247  Q
    ||||||| ||| |||||||| ||||||  ||||||||||||||||||||||||| |||||    
T  40330141 aagataatgatattaaaataaaaataaataataaatattgtattgaaaatataagttttt 40330200  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 12892706 - 12892646
Alignment:
Q  188 taagataaggatcttaaaatagaaataac-aataaatattgtattgaaaatataaattttt 247  Q
    |||||||||||| |||||||| || |||  |||||||||| |||||||||||||| |||||    
T  12892706 taagataaggattttaaaataaaattaaataataaatattatattgaaaatataagttttt 12892646  T

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