View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19488_low_48 (Length: 229)
Name: NF19488_low_48
Description: NF19488
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19488_low_48 |
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Alignment Details
Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 15 - 211
Target Start/End: Complemental strand, 54745906 - 54745710
Alignment:
| Q |
15 |
ataggaggaatgaaaaaagtgaatggaattgtcggggaagagtctcccataaaaagacccaggtgttccactaaagaaacatggactaaacttttgtcct |
114 |
Q |
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| T |
54745906 |
ataggaggaatgaaaaaagtgaatggaattgtcggggaagagtctcccataaaaagacccaggtgttccactaaagaaacatggactaaacttttgtcct |
54745807 |
T |
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| Q |
115 |
ttctcttcttgtagtatttttataaaatcagggagtaacttaaaagtggtattgaagtcatttccaaataggtcattgaggaaaaactgaaacatgg |
211 |
Q |
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| T |
54745806 |
ttctcttcttgtagtctttttataaaatcaggtagtaacttaaaagtggtattgaagtcatttccaaataggtcattgaggaaaaactgaaacatgg |
54745710 |
T |
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