View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19489_high_14 (Length: 309)

Name: NF19489_high_14
Description: NF19489
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19489_high_14
NF19489_high_14
[»] chr5 (11 HSPs)
chr5 (10-309)||(22750950-22751249)
chr5 (58-301)||(38144532-38144773)
chr5 (66-301)||(28370058-28370291)
chr5 (66-301)||(19512204-19512438)
chr5 (53-272)||(23528478-23528695)
chr5 (66-127)||(18407947-18408008)
chr5 (66-127)||(23111203-23111264)
chr5 (66-118)||(22438751-22438803)
chr5 (66-117)||(19236900-19236951)
chr5 (66-115)||(22461158-22461207)
chr5 (66-115)||(22467782-22467831)
[»] chr7 (24 HSPs)
chr7 (10-309)||(18873169-18873468)
chr7 (66-309)||(15167984-15168227)
chr7 (67-309)||(10895795-10896037)
chr7 (59-301)||(14422802-14423043)
chr7 (58-309)||(12709839-12710090)
chr7 (58-309)||(13122910-13123161)
chr7 (66-301)||(16009395-16009628)
chr7 (58-302)||(13743526-13743768)
chr7 (58-272)||(12590639-12590851)
chr7 (58-176)||(13007374-13007491)
chr7 (66-231)||(16677180-16677347)
chr7 (66-231)||(17651416-17651583)
chr7 (66-118)||(11382874-11382926)
chr7 (66-118)||(11389351-11389403)
chr7 (66-118)||(20311055-20311107)
chr7 (66-118)||(21230963-21231015)
chr7 (66-126)||(13679485-13679545)
chr7 (66-117)||(2971254-2971305)
chr7 (66-117)||(11311059-11311110)
chr7 (66-117)||(20906465-20906516)
chr7 (68-119)||(46625961-46626012)
chr7 (58-98)||(831629-831669)
chr7 (58-98)||(1196809-1196849)
chr7 (58-98)||(34958578-34958618)
[»] scaffold0026 (2 HSPs)
scaffold0026 (58-309)||(11846-12097)
scaffold0026 (66-301)||(111504-111737)
[»] chr3 (22 HSPs)
chr3 (66-309)||(14762761-14763004)
chr3 (66-309)||(38310803-38311046)
chr3 (66-295)||(20247792-20248021)
chr3 (66-301)||(9534146-9534379)
chr3 (66-302)||(24192771-24193008)
chr3 (66-301)||(23370509-23370743)
chr3 (66-298)||(55499105-55499337)
chr3 (66-176)||(24933832-24933941)
chr3 (58-144)||(41455093-41455178)
chr3 (58-202)||(16801463-16801606)
chr3 (66-124)||(18929239-18929297)
chr3 (66-127)||(17240516-17240577)
chr3 (66-117)||(13302244-13302295)
chr3 (66-117)||(13323791-13323842)
chr3 (66-117)||(12033448-12033499)
chr3 (66-117)||(13312900-13312951)
chr3 (66-117)||(17131732-17131783)
chr3 (66-117)||(51301589-51301640)
chr3 (66-176)||(10389447-10389557)
chr3 (66-176)||(10414536-10414646)
chr3 (66-176)||(10421206-10421316)
chr3 (66-119)||(16801027-16801080)
[»] scaffold1773 (1 HSPs)
scaffold1773 (58-309)||(988-1237)
[»] scaffold0006 (1 HSPs)
scaffold0006 (58-309)||(49989-50238)
[»] chr6 (24 HSPs)
chr6 (66-296)||(23057760-23057990)
chr6 (58-309)||(29614142-29614393)
chr6 (66-301)||(23839016-23839250)
chr6 (66-301)||(10986184-10986418)
chr6 (58-301)||(18800255-18800497)
chr6 (66-298)||(4477678-4477909)
chr6 (58-195)||(930091-930227)
chr6 (66-301)||(21565215-21565449)
chr6 (58-176)||(12168305-12168422)
chr6 (58-176)||(19287214-19287331)
chr6 (58-176)||(19785865-19785982)
chr6 (58-176)||(19878398-19878515)
chr6 (58-176)||(19884174-19884291)
chr6 (66-145)||(34639990-34640069)
chr6 (66-145)||(34646664-34646743)
chr6 (66-176)||(25469708-25469816)
chr6 (70-118)||(24512851-24512899)
chr6 (66-115)||(9187498-9187547)
chr6 (66-119)||(25348486-25348539)
chr6 (66-119)||(25598643-25598696)
chr6 (66-119)||(25397172-25397225)
chr6 (66-119)||(2286770-2286823)
chr6 (66-119)||(19471338-19471391)
chr6 (66-127)||(31252413-31252474)
[»] scaffold0029 (1 HSPs)
scaffold0029 (58-282)||(111717-111942)
[»] chr4 (12 HSPs)
chr4 (58-309)||(8045828-8046078)
chr4 (58-309)||(11847916-11848173)
chr4 (66-176)||(53483646-53483756)
chr4 (66-118)||(15408139-15408191)
chr4 (66-119)||(8834895-8834948)
chr4 (66-119)||(13888641-13888694)
chr4 (66-117)||(14486661-14486712)
chr4 (68-119)||(22724691-22724742)
chr4 (66-119)||(15245215-15245268)
chr4 (68-119)||(15308120-15308171)
chr4 (68-117)||(27906266-27906315)
chr4 (58-98)||(15747552-15747592)
[»] scaffold0924 (1 HSPs)
scaffold0924 (58-309)||(746-997)
[»] scaffold0117 (2 HSPs)
scaffold0117 (58-309)||(1893-2143)
scaffold0117 (58-309)||(8570-8820)
[»] scaffold0025 (1 HSPs)
scaffold0025 (66-302)||(14399-14635)
[»] chr8 (14 HSPs)
chr8 (66-301)||(44477441-44477674)
chr8 (66-301)||(44492599-44492832)
chr8 (66-309)||(8727736-8727979)
chr8 (58-309)||(23866423-23866674)
chr8 (154-301)||(27940946-27941091)
chr8 (66-176)||(17054533-17054642)
chr8 (8-119)||(18614271-18614382)
chr8 (66-127)||(23482056-23482117)
chr8 (66-119)||(39364919-39364972)
chr8 (66-117)||(29643389-29643440)
chr8 (66-118)||(14056567-14056619)
chr8 (66-118)||(25111976-25112028)
chr8 (66-117)||(24320674-24320725)
chr8 (66-119)||(21931696-21931749)
[»] chr2 (15 HSPs)
chr2 (66-301)||(19661457-19661690)
chr2 (66-301)||(6483536-6483769)
chr2 (66-301)||(6487003-6487236)
chr2 (58-231)||(26583715-26583886)
chr2 (66-301)||(23878826-23879059)
chr2 (66-301)||(23089058-23089292)
chr2 (66-301)||(23101466-23101700)
chr2 (66-176)||(5706027-5706137)
chr2 (66-127)||(23265133-23265194)
chr2 (66-127)||(23280201-23280262)
chr2 (66-124)||(21908353-21908411)
chr2 (66-119)||(24661576-24661629)
chr2 (66-117)||(10577-10628)
chr2 (66-117)||(25180933-25180984)
chr2 (66-166)||(26885133-26885233)
[»] chr1 (12 HSPs)
chr1 (66-301)||(20437027-20437261)
chr1 (58-176)||(41111977-41112094)
chr1 (8-127)||(32651563-32651682)
chr1 (66-127)||(18712790-18712851)
chr1 (66-118)||(19663520-19663572)
chr1 (66-119)||(10811786-10811839)
chr1 (66-119)||(20805320-20805373)
chr1 (66-118)||(11158093-11158145)
chr1 (66-117)||(20851136-20851187)
chr1 (66-117)||(20857763-20857814)
chr1 (66-117)||(21706276-21706327)
chr1 (66-117)||(21710818-21710869)
[»] scaffold0553 (1 HSPs)
scaffold0553 (66-301)||(10199-10433)
[»] scaffold0544 (1 HSPs)
scaffold0544 (66-301)||(1529-1763)
[»] scaffold0247 (1 HSPs)
scaffold0247 (58-301)||(11159-11401)
[»] scaffold0058 (1 HSPs)
scaffold0058 (58-302)||(109-350)
[»] scaffold0090 (1 HSPs)
scaffold0090 (58-302)||(17985-18229)
[»] scaffold0456 (4 HSPs)
scaffold0456 (10-145)||(904-1039)
scaffold0456 (10-145)||(8049-8184)
scaffold0456 (208-302)||(806-899)
scaffold0456 (208-302)||(7951-8044)
[»] scaffold0476 (1 HSPs)
scaffold0476 (66-301)||(3296-3531)
[»] scaffold0154 (1 HSPs)
scaffold0154 (58-202)||(30772-30917)
[»] scaffold0077 (1 HSPs)
scaffold0077 (66-301)||(3625-3859)
[»] scaffold0634 (1 HSPs)
scaffold0634 (222-309)||(3471-3558)
[»] scaffold0796 (2 HSPs)
scaffold0796 (58-176)||(1728-1845)
scaffold0796 (58-176)||(5751-5868)
[»] scaffold0004 (1 HSPs)
scaffold0004 (16-127)||(116887-116998)
[»] scaffold0129 (1 HSPs)
scaffold0129 (66-174)||(45278-45386)
[»] scaffold0222 (1 HSPs)
scaffold0222 (66-127)||(16811-16872)
[»] scaffold0461 (1 HSPs)
scaffold0461 (66-127)||(11-72)
[»] scaffold0146 (1 HSPs)
scaffold0146 (66-127)||(13623-13684)
[»] scaffold0020 (1 HSPs)
scaffold0020 (66-127)||(101931-101992)
[»] scaffold0310 (1 HSPs)
scaffold0310 (66-118)||(17643-17695)
[»] scaffold0107 (1 HSPs)
scaffold0107 (66-118)||(40535-40587)
[»] scaffold0019 (1 HSPs)
scaffold0019 (66-118)||(135473-135525)
[»] scaffold0235 (1 HSPs)
scaffold0235 (66-116)||(22596-22646)
[»] scaffold0124 (1 HSPs)
scaffold0124 (66-118)||(34279-34331)
[»] scaffold0138 (1 HSPs)
scaffold0138 (66-119)||(12296-12349)
[»] scaffold0317 (1 HSPs)
scaffold0317 (66-126)||(1378-1438)
[»] scaffold0139 (1 HSPs)
scaffold0139 (66-118)||(15000-15052)
[»] scaffold0096 (1 HSPs)
scaffold0096 (66-119)||(39510-39563)
[»] scaffold0815 (1 HSPs)
scaffold0815 (66-114)||(1453-1501)
[»] scaffold1318 (1 HSPs)
scaffold1318 (66-117)||(1916-1967)
[»] scaffold0348 (1 HSPs)
scaffold0348 (66-117)||(9336-9387)
[»] scaffold0127 (1 HSPs)
scaffold0127 (66-117)||(10239-10290)
[»] scaffold0023 (1 HSPs)
scaffold0023 (66-117)||(135438-135489)
[»] scaffold0001 (1 HSPs)
scaffold0001 (66-117)||(493032-493082)
[»] scaffold2054 (1 HSPs)
scaffold2054 (58-151)||(680-774)
[»] scaffold0609 (1 HSPs)
scaffold0609 (66-127)||(5861-5922)
[»] scaffold0335 (1 HSPs)
scaffold0335 (66-119)||(2631-2684)


Alignment Details
Target: chr5 (Bit Score: 248; Significance: 1e-138; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 10 - 309
Target Start/End: Complemental strand, 22751249 - 22750950
Alignment:
Q  10 gagatgaacaagtatagtcagagaatctggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttc 109  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  22751249 gagaagaacaagtatagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactttctctcgataatcataatctataatttc 22751150  T
Q  110 tgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattccctt 209  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |||    
T  22751149 tgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctctt 22751050  T
Q  210 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  22751049 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 22750950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 58 - 301
Target Start/End: Original strand, 38144532 - 38144773
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  38144532 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttag 38144631  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 257  Q
    ||||| ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| |  || || ||||||    
T  38144632 ggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgat 38144730  T
Q  258 cataaattgattgaaatttatgaatgattggatgaattgatgaa 301  Q
    |||||||||||||||| ||| || ||||||||||||||||||||    
T  38144731 cataaattgattgaaa-ttacgattgattggatgaattgatgaa 38144773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 66 - 301
Target Start/End: Original strand, 28370058 - 28370291
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  28370058 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 28370157  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 265  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| |||||||||||||||||| |  || || ||||||||||||||    
T  28370158 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaatt 28370256  T
Q  266 gattgaaatttatgaatgattggatgaattgatgaa 301  Q
    |||||||| |||||| |||| |||||||||||||||    
T  28370257 gattgaaa-ttatgattgatgggatgaattgatgaa 28370291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 66 - 301
Target Start/End: Complemental strand, 19512438 - 19512204
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |    
T  19512438 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 19512339  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 264  Q
    |||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| |||||||||||||||||| |  || || |||||||||||||    
T  19512338 tgatgattttgaggggaa-tgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaat 19512240  T
Q  265 tgattgaaatttatgaatgattggatgaattgatgaa 301  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  19512239 tgattgaaa-ttatgattgattggatgaattgatgaa 19512204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 53 - 272
Target Start/End: Complemental strand, 23528695 - 23528478
Alignment:
Q  53 cttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagg 152  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||      
T  23528695 cttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaa 23528597  T
Q  153 gttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgct 252  Q
    |||||||||| ||||||||||||| ||  | || |||| |||  ||||| ||  |||| ||| ||||||| |||| |||| |||||||  ||||| ||||    
T  23528596 gttagggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgct 23528499  T
Q  253 gtgat-cataaattgattgaa 272  Q
    || || ||| |||||||||||    
T  23528498 gtaatccatgaattgattgaa 23528478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 18407947 - 18408008
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  18407947 ggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 23111203 - 23111264
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23111203 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 22438751 - 22438803
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22438751 ggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 19236951 - 19236900
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  19236951 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 22461207 - 22461158
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 115  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22461207 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 22467831 - 22467782
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 115  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22467831 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 10 - 309
Target Start/End: Complemental strand, 18873468 - 18873169
Alignment:
Q  10 gagatgaacaagtatagtcagagaatctggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttc 109  Q
    |||| |||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  18873468 gagaagaacaagtatagtcagagaatccggccgttgtgcgtttcttctaaaactaaggtaagggtgagactttctctcgataatcataatctataatttc 18873369  T
Q  110 tgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattccctt 209  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |||    
T  18873368 tgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctctt 18873269  T
Q  210 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  18873268 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 18873169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 66 - 309
Target Start/End: Complemental strand, 15168227 - 15167984
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  15168227 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 15168128  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 265  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168127 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 15168028  T
Q  266 gattgaaatttatgaatgattggatgaattgatgaatttgtgta 309  Q
    |||||||| |||||| ||||||||||||||||||||||||||||    
T  15168027 gattgaaaattatgagtgattggatgaattgatgaatttgtgta 15167984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 67 - 309
Target Start/End: Original strand, 10895795 - 10896037
Alignment:
Q  67 gtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaat 165  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||| |||||||| |||||||||||| ||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgat 10895894  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 265  Q
    ||||||||||| |||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10895895 gatgattctgaggggaat-gggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 10895993  T
Q  266 gattgaaatttatgaatgattggatgaattgatgaatttgtgta 309  Q
    |||||||| |||||| ||||||||||||||||||||||||||||    
T  10895994 gattgaaaattatgagtgattggatgaattgatgaatttgtgta 10896037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 59 - 301
Target Start/End: Complemental strand, 14423043 - 14422802
Alignment:
Q  59 aaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttag 157  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  14423043 aaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 14422944  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 257  Q
    ||||| ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| | ||| || ||||||    
T  14422943 ggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgat 14422845  T
Q  258 cataaattgattgaaatttatgaatgattggatgaattgatgaa 301  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  14422844 cataaattgattgaaa-ttatgattgattggatgaattgatgaa 14422802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 58 - 309
Target Start/End: Original strand, 12709839 - 12710090
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  12709839 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 12709937  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 256  Q
    ||||| ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  12709938 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttgctgtga 12710036  T
Q  257 tcataaattga-ttgaaatttatgaatgattggatgaattgatgaatttgtgta 309  Q
    || |||| ||| ||| ||||||||| ||||||||||||||||||||||||||||    
T  12710037 tcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgta 12710090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 58 - 309
Target Start/End: Original strand, 13122910 - 13123161
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13122910 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 13123008  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 256  Q
    ||||| ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  13123009 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttgctgtga 13123107  T
Q  257 tcataaattga-ttgaaatttatgaatgattggatgaattgatgaatttgtgta 309  Q
    || |||| ||| ||| ||||||||| ||||||||||||||||||||||||||||    
T  13123108 tcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgta 13123161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 66 - 301
Target Start/End: Complemental strand, 16009628 - 16009395
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||| ||||| ||    
T  16009628 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggtttgat 16009529  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 265  Q
    ||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| |  || || |||||||||||| |    
T  16009528 gatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaact 16009430  T
Q  266 gattgaaatttatgaatgattggatgaattgatgaa 301  Q
    |||||||| |||||| ||||||||||||||||||||    
T  16009429 gattgaaa-ttatgattgattggatgaattgatgaa 16009395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 58 - 302
Target Start/End: Complemental strand, 13743768 - 13743526
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13743768 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 13743670  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 257  Q
    ||||| ||||||||| ||||| ||| |||||||||||| ||||||||  |||||| |||  |||||||| |||| ||||||||| ||||  |||||||||    
T  13743669 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctatgttattgctgtgat 13743570  T
Q  258 cataaattgattgaaatttatgaatgattggatgaattgatgaat 302  Q
    ||||||||| |||||| |||||  || |||||| |||||||||||    
T  13743569 cataaattggttgaaa-ttatgcttggttggataaattgatgaat 13743526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 58 - 272
Target Start/End: Original strand, 12590639 - 12590851
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  12590639 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 12590737  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 257  Q
    ||||| ||||||||||||| ||  | || |||| |||  ||||| ||  |||| ||| ||||||| ||||||||| |||||||  ||||| |||||| ||    
T  12590738 ggtttgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatccatgttgttgctgtaat 12590835  T
Q  258 -cataaattgattgaa 272  Q
     ||| |||||||||||    
T  12590836 ccattaattgattgaa 12590851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 58 - 176
Target Start/End: Complemental strand, 13007491 - 13007374
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  13007491 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 13007393  T
Q  158 ggtttaatgatgattctga 176  Q
    ||||| |||||||||||||    
T  13007392 ggtttgatgatgattctga 13007374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 16677347 - 16677180
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaat-aaattgagggttagggttta 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| || ||||| |||||||||||||     
T  16677347 ggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggtttg 16677248  T
Q  164 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 231  Q
    ||||||||| ||| | | || | ||||||||| |||||| |   ||||||  | ||||||||||||||    
T  16677247 atgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 16677180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 17651583 - 17651416
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaat-aaattgagggttagggttta 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| || ||||| |||||||||||||     
T  17651583 ggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggtttg 17651484  T
Q  164 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 231  Q
    ||||||||| ||| | | || | ||||||||| |||||| |   ||||||  | ||||||||||||||    
T  17651483 atgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 17651416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 11382874 - 11382926
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11382874 ggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 11389351 - 11389403
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11389351 ggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 20311055 - 20311107
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  20311055 ggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 21230963 - 21231015
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  21230963 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 13679545 - 13679485
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 126  Q
    ||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  13679545 ggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 13679485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 2971305 - 2971254
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  2971305 ggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 11311110 - 11311059
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||||||||||||||||||||| ||| | || ||||||| ||||||    
T  11311110 ggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 20906465 - 20906516
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20906465 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 46626012 - 46625961
Alignment:
Q  68 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||||| |||||||| || ||||| ||||||||| |||||||||    
T  46626012 taagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 831629 - 831669
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataa 98  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  831629 aaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 1196809 - 1196849
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataa 98  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  1196809 aaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 34958618 - 34958578
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataa 98  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  34958618 aaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 208; Significance: 1e-114; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 58 - 309
Target Start/End: Original strand, 11846 - 12097
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  11846 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagagttag 11945  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 257  Q
    ||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  11946 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatctttgttgttgctgtgat 12045  T
Q  258 cataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 309  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  12046 cataagttgattgaaatttatgagtgattggatgaattgatgaatttgtgta 12097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 66 - 301
Target Start/End: Complemental strand, 111737 - 111504
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  111737 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 111638  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 265  Q
    ||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| |  || || ||||||||||||||    
T  111637 gatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaatt 111539  T
Q  266 gattgaaatttatgaatgattggatgaattgatgaa 301  Q
    |||||||| |||||| ||||||||||||||||||||    
T  111538 gattgaaa-ttatgattgattggatgaattgatgaa 111504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 66 - 309
Target Start/End: Original strand, 14762761 - 14763004
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  14762761 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 14762860  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 265  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762861 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 14762960  T
Q  266 gattgaaatttatgaatgattggatgaattgatgaatttgtgta 309  Q
    |||||||| |||||| ||||||||||||||||||||||||||||    
T  14762961 gattgaaaattatgagtgattggatgaattgatgaatttgtgta 14763004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 66 - 309
Target Start/End: Original strand, 38310803 - 38311046
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  38310803 ggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttgat 38310902  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 265  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310903 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 38311002  T
Q  266 gattgaaatttatgaatgattggatgaattgatgaatttgtgta 309  Q
    |||||||| |||||| ||||||||||||| ||||||||||||||    
T  38311003 gattgaaaattatgagtgattggatgaatggatgaatttgtgta 38311046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 66 - 295
Target Start/End: Original strand, 20247792 - 20248021
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  20247792 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 20247891  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 265  Q
    ||||||||||||||||| |||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247892 gatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 20247991  T
Q  266 gattgaaatttatgaatgattggatgaatt 295  Q
    |||||||| |||||| ||||||||||||||    
T  20247992 gattgaaaattatgagtgattggatgaatt 20248021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 66 - 301
Target Start/End: Complemental strand, 9534379 - 9534146
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  9534379 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 9534280  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 265  Q
    |||||||||||  |||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| |  || ||  |||||||||||||    
T  9534279 gatgattctgagtggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgtcgtgatcataaatt 9534181  T
Q  266 gattgaaatttatgaatgattggatgaattgatgaa 301  Q
    |||||||| |||||| ||||||||||||||||||||    
T  9534180 gattgaaa-ttatgattgattggatgaattgatgaa 9534146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 66 - 302
Target Start/End: Complemental strand, 24193008 - 24192771
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| |    
T  24193008 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 24192909  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtg-atcataaa 263  Q
    |||||||||||||||||| |||||||||||| |||||||||  ||||||| | |||||||||||||||||||||||| || || ||||||| ||||||||    
T  24192908 tgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtgaatcataaa 24192809  T
Q  264 ttgattgaaatttatgaatgattggatgaattgatgaat 302  Q
     |||||||||  ||||| ||||||||| |||||||||||    
T  24192808 ctgattgaaa-atatgattgattggataaattgatgaat 24192771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 66 - 301
Target Start/End: Original strand, 23370509 - 23370743
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 164  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  23370509 ggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 23370608  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 264  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| |  || || |||||||||||||    
T  23370609 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaat 23370707  T
Q  265 tgattgaaatttatgaatgattggatgaattgatgaa 301  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  23370708 tgattgaaa-ttatgattgattggatgaattgatgaa 23370743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 298
Target Start/End: Original strand, 55499105 - 55499337
Alignment:
Q  66 ggtaagggtgagactatctctcaataatc-ataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgagggttagggttta 163  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| | ||||||||||||| ||||||   |||   |  |||||||||||||||||||     
T  55499105 ggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttgaggataaaattgagggttagggtttg 55499204  T
Q  164 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaa 263  Q
    ||||||||||||| ||||| |||||||||||| ||||||||   ||||||| | |||||| |||||||| |||||||| |   | |||||||||||||||    
T  55499205 atgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatacagttgctgtgatcataaa 55499303  T
Q  264 ttgattgaaatttatgaatgattggatgaattgat 298  Q
    ||||||||||  ||| | |||||||||||||||||    
T  55499304 ttgattgaaa-atataattgattggatgaattgat 55499337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 66 - 176
Target Start/End: Original strand, 24933832 - 24933941
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||   ||||||||| ||    
T  24933832 ggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtttgat 24933930  T
Q  166 gatgattctga 176  Q
    |||||||||||    
T  24933931 gatgattctga 24933941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 41455093 - 41455178
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata 144  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  41455093 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaata 41455178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 58 - 202
Target Start/End: Original strand, 16801463 - 16801606
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaat-aaattgagggtta 156  Q
    ||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||| ||| ||| || ||||||| |||||    
T  16801463 aaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttgaagataaaattgaaggtta 16801561  T
Q  157 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaa 202  Q
    ||| || ||||||||| ||| | |||| | ||||||||| ||||||    
T  16801562 ggg-ttgatgatgattttgaggagaatggtgtaatgatcatgttaa 16801606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 66 - 124
Target Start/End: Complemental strand, 18929297 - 18929239
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 124  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  18929297 ggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 17240516 - 17240577
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  17240516 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 13302244 - 13302295
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    ||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13302244 ggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 13323791 - 13323842
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    ||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13323791 ggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 12033448 - 12033499
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  12033448 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 13312900 - 13312951
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    ||||||||||||| ||||| |||||||||||||| | |||||| ||||||||    
T  13312900 ggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 17131783 - 17131732
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  17131783 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 51301640 - 51301589
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    ||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  51301640 ggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 176
Target Start/End: Original strand, 10389447 - 10389557
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    |||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   ||||||||| ||    
T  10389447 ggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtttgat 10389546  T
Q  166 gatgattctga 176  Q
    |||||||||||    
T  10389547 gatgattctga 10389557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 176
Target Start/End: Original strand, 10414536 - 10414646
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    |||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   ||||||||| ||    
T  10414536 ggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtttgat 10414635  T
Q  166 gatgattctga 176  Q
    |||||||||||    
T  10414636 gatgattctga 10414646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 176
Target Start/End: Original strand, 10421206 - 10421316
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    |||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   ||||||||| ||    
T  10421206 ggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtttgat 10421305  T
Q  166 gatgattctga 176  Q
    |||||||||||    
T  10421306 gatgattctga 10421316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 16801080 - 16801027
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  16801080 ggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 16801027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 58 - 309
Target Start/End: Complemental strand, 1237 - 988
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  1237 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 1139  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 257  Q
    ||||| |||| |||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  1138 ggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatc-ttgttgttgctgtgat 1040  T
Q  258 cataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 309  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1039 cataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgta 988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 58 - 309
Target Start/End: Complemental strand, 50238 - 49989
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  50238 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 50140  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 257  Q
    ||||| |||| |||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  50139 ggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatc-ttgttgttgctgtgat 50041  T
Q  258 cataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 309  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  50040 cataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgta 49989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 191; Significance: 1e-104; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 66 - 296
Target Start/End: Complemental strand, 23057990 - 23057760
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  23057990 ggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 23057891  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 265  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057890 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 23057791  T
Q  266 gattgaaatttatgaatgattggatgaattg 296  Q
    |||||||| |||||| |||||||||||||||    
T  23057790 gattgaaaattatgagtgattggatgaattg 23057760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 58 - 309
Target Start/End: Original strand, 29614142 - 29614393
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaa-taaattgagggtta 156  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||| ||||||||||||||    
T  29614142 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattgagggtta 29614241  T
Q  157 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 256  Q
    |||||| ||||||||| ||||||||| |||||||||||| ||||||||| |||||| |  |||||| |||||||||||||||||||||||| ||||||||    
T  29614242 gggtttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgtattg-aatgtttagaatgaaaacttaatctttgttgttgctgtga 29614340  T
Q  257 tcataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 309  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29614341 tcataacttgattgaaatttatgaatgattggatgaattgatgaatttgtgta 29614393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 66 - 301
Target Start/End: Complemental strand, 23839250 - 23839016
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagt-tttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| |    
T  23839250 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtttga 23839151  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 264  Q
    |||||||||| ||||| | |||||| ||||| |||||||||  ||||||| |||||||||||||||||||||||||| |  || || |||||||||||||    
T  23839150 tgatgattct-aaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaat 23839052  T
Q  265 tgattgaaatttatgaatgattggatgaattgatgaa 301  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  23839051 tgattgaaa-ttatgattgattggatgaattgatgaa 23839016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 66 - 301
Target Start/End: Original strand, 10986184 - 10986418
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |    
T  10986184 ggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 10986283  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 264  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| |||||||||||||||||||||||||| |  || || |||||||||||||    
T  10986284 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaat 10986382  T
Q  265 tgattgaaatttatgaatgattggatgaattgatgaa 301  Q
    ||||||||| ||| || ||||||||||||||||||||    
T  10986383 tgattgaaa-ttacgattgattggatgaattgatgaa 10986418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 58 - 301
Target Start/End: Complemental strand, 18800497 - 18800255
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata-aattgagggtta 156  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18800497 aaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggtta 18800398  T
Q  157 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 256  Q
    |||||| |||||||||||| |||||| || ||||||||| |||||||||  ||||||| | ||||||| ||||||| |||||||| | ||| || |||||    
T  18800397 gggtttgatgatgattctggagggaa-tgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatctatattgttgttgtga 18800299  T
Q  257 tcataaattgattgaaatttatgaatgattggatgaattgatgaa 301  Q
    ||| |||||||||||||  ||| | ||||||||||||||||||||    
T  18800298 tcacaaattgattgaaa-atataattgattggatgaattgatgaa 18800255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 66 - 298
Target Start/End: Complemental strand, 4477909 - 4477678
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  4477909 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 4477810  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 264  Q
    |||||||||||| ||||| |||||| ||||| || ||||||  ||||||| ||||||| |||||||||||||||||| | ||| || |||||||||||||    
T  4477809 tgatgattctgaggggaa-tgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcataaat 4477711  T
Q  265 tgattgaaatttatgaatgattggatgaattgat 298  Q
    ||||||||| |||||| ||||||||||| |||||    
T  4477710 tgattgaaa-ttatgattgattggatgatttgat 4477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 930091 - 930227
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  930091 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgagggttag 930190  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatc 195  Q
    ||||| |||||| |||||||||||| ||||||||||||    
T  930191 ggtttgatgatgtttctgaagggaa-tgggtaatgatc 930227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 66 - 301
Target Start/End: Original strand, 21565215 - 21565449
Alignment:
Q  66 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||||||| |    
T  21565215 ggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttga 21565314  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 264  Q
    |||||||||| | |||||| ||||||||||| ||||||||   ||||||| | | |||| |||||||| |||||||| |  || ||||||||||||||||    
T  21565315 tgatgattctaaggggaat-gggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataaat 21565413  T
Q  265 tgattgaaatttatgaatgattggatgaattgatgaa 301  Q
    |||||||||  ||| | ||||||||||||||||||||    
T  21565414 tgattgaaa-atataattgattggatgaattgatgaa 21565449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 58 - 176
Target Start/End: Complemental strand, 12168422 - 12168305
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  12168422 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 12168324  T
Q  158 ggtttaatgatgattctga 176  Q
    ||||| |||||||||||||    
T  12168323 ggtttgatgatgattctga 12168305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 58 - 176
Target Start/End: Complemental strand, 19287331 - 19287214
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19287331 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19287233  T
Q  158 ggtttaatgatgattctga 176  Q
    ||||| |||||||||||||    
T  19287232 ggtttgatgatgattctga 19287214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 58 - 176
Target Start/End: Original strand, 19785865 - 19785982
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||  ||||||||||||||||| |||  |||||    
T  19785865 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaaagttag 19785963  T
Q  158 ggtttaatgatgattctga 176  Q
    ||||| |||||||||||||    
T  19785964 ggtttgatgatgattctga 19785982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 58 - 176
Target Start/End: Complemental strand, 19878515 - 19878398
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19878515 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19878417  T
Q  158 ggtttaatgatgattctga 176  Q
    ||||| |||||||||||||    
T  19878416 ggtttgatgatgattctga 19878398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 58 - 176
Target Start/End: Complemental strand, 19884291 - 19884174
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19884291 aaaactaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19884193  T
Q  158 ggtttaatgatgattctga 176  Q
    ||||| |||||||||||||    
T  19884192 ggtttgatgatgattctga 19884174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 34639990 - 34640069
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataa 145  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  34639990 ggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataa 34640069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 34646664 - 34646743
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataa 145  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  || |||||||||||||    
T  34646664 ggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataa 34646743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 176
Target Start/End: Original strand, 25469708 - 25469816
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  | ||||||||||||||  |||   ||||||||| ||    
T  25469708 ggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggtttgat 25469805  T
Q  166 gatgattctga 176  Q
    ||| |||||||    
T  25469806 gataattctga 25469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 24512851 - 24512899
Alignment:
Q  70 agggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  24512851 agggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 9187547 - 9187498
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 115  Q
    ||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  9187547 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 25348539 - 25348486
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  25348539 ggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 25598696 - 25598643
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  25598696 ggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 25397225 - 25397172
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  25397225 ggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 2286770 - 2286823
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  2286770 ggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 2286823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 19471338 - 19471391
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| ||||| || |||||||| ||||||||||| |||||||    
T  19471338 ggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 31252474 - 31252413
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    ||||||||||||| ||||| | ||| || ||||| ||||||||||||||||| | |||||||    
T  31252474 ggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattg 31252413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 58 - 282
Target Start/End: Complemental strand, 111942 - 111717
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaa-ttgacctaattgcttagttttggaaaataaattgagggtta 156  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  111942 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattgagggtta 111843  T
Q  157 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 256  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111842 gggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 111743  T
Q  257 tcataaattgattgaaatttatgaat 282  Q
    ||||||||||||||||||| ||||||    
T  111742 tcataaattgattgaaattgatgaat 111717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 184; Significance: 1e-99; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 58 - 309
Target Start/End: Original strand, 8045828 - 8046078
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  8045828 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 8045926  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 257  Q
    ||||| | ||  ||||||||||||| ||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  8045927 ggtttgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatccttgttgttgctgtgat 8046026  T
Q  258 cataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 309  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8046027 cataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgta 8046078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 58 - 309
Target Start/End: Complemental strand, 11848173 - 11847916
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaa------ttgag 151  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || |||||||| ||||| ||      |||||    
T  11848173 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatcaattgag 11848074  T
Q  152 ggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgc 251  Q
    ||||||||||| |||| |||||||||| | | |||||||||||| ||||||| |  || ||||||||||||||||||||||||||||||||||||| |||    
T  11848073 ggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatctttgttgttgc 11847974  T
Q  252 tgtgatcataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 309  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  11847973 tgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 11847916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 176
Target Start/End: Complemental strand, 53483756 - 53483646
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttagggtttaa 164  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||||| |    
T  53483756 ggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttga 53483658  T
Q  165 tgatgattctga 176  Q
    ||||||||||||    
T  53483657 tgatgattctga 53483646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 15408191 - 15408139
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  15408191 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 8834948 - 8834895
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  8834948 ggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 13888694 - 13888641
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  13888694 ggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 14486712 - 14486661
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    ||||||||||||||||||  ||||| |||||||| |||||||||||||||||    
T  14486712 ggtaagggtgagactatccttcaatgatcataatatataatttctgaaaatt 14486661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  68 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 15245268 - 15245215
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15245268 ggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 15308171 - 15308120
Alignment:
Q  68 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15308171 taagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 27906315 - 27906266
Alignment:
Q  68 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||| || ||||| ||||| |||||||| |||||||||||||||||    
T  27906315 taagggtgggattatctttcaatgatcataatgtataatttctgaaaatt 27906266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 15747552 - 15747592
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataa 98  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  15747552 aaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 173; Significance: 5e-93; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 58 - 309
Target Start/End: Original strand, 746 - 997
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggtta 156  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  746 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattgagggtta 845  T
Q  157 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 256  Q
    |||||| |||| |||| ||||||||| |||||||||||| || |||| | ||||||||||||||||||| || ||||||||||| |||||| || |||||    
T  846 gggtttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatc-ttgttgttgatgtga 944  T
Q  257 tcataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 309  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  945 tcataaactgattgaaatttatgagtgattggatgaattgatgaatttgtgta 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 154; Significance: 1e-81; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 58 - 309
Target Start/End: Original strand, 1893 - 2143
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaa-ttgacctaattgcttagttttggaaaataaattgagggtta 156  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||    
T  1893 aaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggtta 1992  T
Q  157 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 256  Q
    |||||| ||||||||| ||| || |  |||||||||||  ||||||||| |||||||| ||||||||| ||||||||||||||| |||||| ||||||||    
T  1993 gggtttgatgatgattttgatggaa--tgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatccttgttgttgctgtga 2090  T
Q  257 tcataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 309  Q
    |||||| |||||||||||| |||| |||||| |||||||||||||||||||||    
T  2091 tcataacttgattgaaattgatgagtgattgtatgaattgatgaatttgtgta 2143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 58 - 309
Target Start/End: Original strand, 8570 - 8820
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaa-ttgacctaattgcttagttttggaaaataaattgagggtta 156  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||    
T  8570 aaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggtta 8669  T
Q  157 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 256  Q
    |||||| ||||||||| ||| || |  |||||||||||  ||||||||| |||||||| ||||||||| ||||||||||||||| |||||| ||||||||    
T  8670 gggtttgatgatgattatgatggaa--tgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatccttgttgttgctgtga 8767  T
Q  257 tcataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 309  Q
    |||||| |||||||||||| || | |||||| |||||||||||||||||||||    
T  8768 tcataacttgattgaaattgataagtgattgtatgaattgatgaatttgtgta 8820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 66 - 302
Target Start/End: Original strand, 14399 - 14635
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| |    
T  14399 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 14498  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 264  Q
    |||||||||||||||||| |||||||||||| |||||||||  ||||||| | |||||| ||||||||||||||||| || || |||||||||||||||     
T  14499 tgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatcataaac 14598  T
Q  265 tgattgaaatttatgaatgattggatgaattgatgaat 302  Q
    |||||||||  ||||| ||||||||| |||||||||||    
T  14599 tgattgaaa-atatgattgattggataaattgatgaat 14635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 2e-80; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 66 - 301
Target Start/End: Complemental strand, 44477674 - 44477441
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  44477674 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 44477575  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 265  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| |||||||||||||||||| |  || || ||||||||||||||    
T  44477574 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaatt 44477476  T
Q  266 gattgaaatttatgaatgattggatgaattgatgaa 301  Q
    |||||||| |||||| ||||||||||||||||||||    
T  44477475 gattgaaa-ttatgattgattggatgaattgatgaa 44477441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 66 - 301
Target Start/End: Complemental strand, 44492832 - 44492599
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  44492832 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 44492733  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 265  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| |||||||||||||||||| |  || || ||||||||||||||    
T  44492732 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaatt 44492634  T
Q  266 gattgaaatttatgaatgattggatgaattgatgaa 301  Q
    |||||||| |||||| ||||||||||||||||||||    
T  44492633 gattgaaa-ttatgattgattggatgaattgatgaa 44492599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 66 - 309
Target Start/End: Original strand, 8727736 - 8727979
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| |    
T  8727736 ggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 8727835  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 264  Q
     ||||||||||| ||| || ||||| ||||| |||||||||  ||||||| |||||||||||||||||||||||||| |  || || |||||||||||||    
T  8727836 cgatgattctgaggggtat-gggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaat 8727934  T
Q  265 tgattgaaatttatgaatgattggatgaattgatgaatttgtgta 309  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||    
T  8727935 tgattgaaaattatgagtgattggatgaattgatgaatttgtgta 8727979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 58 - 309
Target Start/End: Complemental strand, 23866674 - 23866423
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  23866674 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 23866576  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 256  Q
    ||||| ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  |||||||||| |||||| |||| |||    
T  23866575 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttgctctga 23866477  T
Q  257 tcataaattga-ttgaaatttatgaatgattggatgaattgatgaatttgtgta 309  Q
    || |||| ||| ||| ||||||||| ||||||||||||||||||||||||||||    
T  23866476 tcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgta 23866423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 27940946 - 27941091
Alignment:
Q  154 ttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctg 253  Q
    ||||||||| ||||||||||||| |||||| ||||| ||||| |||||||||  ||||||| |||||||||||||||||| ||||||| |  || || |     
T  27940946 ttagggtttgatgatgattctgaggggaat-gggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaatttaatctatactgttgtta 27941044  T
Q  254 tgatcataaattgattgaaatttatgaatgattggatgaattgatgaa 301  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||    
T  27941045 tgatcataaattgattgaaa-ttatgattgattggatgaattgatgaa 27941091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 66 - 176
Target Start/End: Complemental strand, 17054642 - 17054533
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||||||| ||    
T  17054642 ggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtttgat 17054544  T
Q  166 gatgattctga 176  Q
    |||||||||||    
T  17054543 gatgattctga 17054533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 18614382 - 18614271
Alignment:
Q  8 gtgagatgaacaagtatagtcagagaatctggtcgttgtgcgttt-cttctaaaactatggtaagggtgagactatctctcaataatcataatctataat 106  Q
    |||||| ||||||||| |||||||||||| | || |||||||||| ||||||||  || ||||||||||||||||||||||||||||||| || ||||||    
T  18614382 gtgagaagaacaagtagagtcagagaatccgatcattgtgcgttttcttctaaat-taaggtaagggtgagactatctctcaataatcatgatatataat 18614284  T
Q  107 ttctgaaaattga 119  Q
    |||||||||||||    
T  18614283 ttctgaaaattga 18614271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 23482056 - 23482117
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23482056 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 39364972 - 39364919
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  39364972 ggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 29643389 - 29643440
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    ||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  29643389 ggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 14056567 - 14056619
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  14056567 ggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 25112028 - 25111976
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  25112028 ggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 24320674 - 24320725
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  24320674 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 21931749 - 21931696
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  21931749 ggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 2e-80; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 66 - 301
Target Start/End: Original strand, 19661457 - 19661690
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  19661457 ggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 19661556  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 265  Q
    ||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| | ||| || ||||||||||||||    
T  19661557 gatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcataaatt 19661655  T
Q  266 gattgaaatttatgaatgattggatgaattgatgaa 301  Q
    |||||||| |||||| ||||||||||||||||||||    
T  19661656 gattgaaa-ttatgattgattggatgaattgatgaa 19661690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 66 - 301
Target Start/End: Complemental strand, 6483769 - 6483536
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  6483769 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 6483670  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 265  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| |||||||||||||||||| |  || || ||||||||||||||    
T  6483669 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaatt 6483571  T
Q  266 gattgaaatttatgaatgattggatgaattgatgaa 301  Q
    |||||||| |||||| |||| |||||||||||||||    
T  6483570 gattgaaa-ttatgattgatgggatgaattgatgaa 6483536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 66 - 301
Target Start/End: Complemental strand, 6487236 - 6487003
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  6487236 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 6487137  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 265  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| |||||||||||||||||| |  || || ||||||||||||||    
T  6487136 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaatt 6487038  T
Q  266 gattgaaatttatgaatgattggatgaattgatgaa 301  Q
    |||||||| |||||| |||| |||||||||||||||    
T  6487037 gattgaaa-ttatgattgatgggatgaattgatgaa 6487003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 58 - 231
Target Start/End: Complemental strand, 26583886 - 26583715
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26583886 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 26583788  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 231  Q
    || || ||||||||||||| |||||  ||||||||||| |||||| |   ||||||  | ||||||||||||||    
T  26583787 ggcttgatgatgattctgaggggaa-agggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 26583715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 66 - 301
Target Start/End: Complemental strand, 23879059 - 23878826
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 165  Q
    ||||||||||||||||||||||| |||| || || |||||||||  ||||||||||||||||||||   |||   | |||||||||||||||||||   |    
T  23879059 ggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttgaggattaaattgagggttagggttgt-t 23878961  T
Q  166 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 265  Q
    ||||||||||| |||||| ||||||||||| ||||||||   ||||||| | ||||||||||||||| |||||||| |  || || ||||||||||||||    
T  23878960 gatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgttgtgatcataaatt 23878861  T
Q  266 gattgaaatttatgaatgattggatgaattgatgaa 301  Q
    ||||||||  ||  | ||||||||||||||||||||    
T  23878860 gattgaaa-atagaattgattggatgaattgatgaa 23878826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 66 - 301
Target Start/End: Original strand, 23089058 - 23089292
Alignment:
Q  66 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||||||| |    
T  23089058 ggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttga 23089157  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 264  Q
    |||||||||| | |||||| ||||||||||| ||||||||   ||||||| | | |||| |||||||| |||||||| |  || ||||||||||||||||    
T  23089158 tgatgattctaaggggaat-gggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataaat 23089256  T
Q  265 tgattgaaatttatgaatgattggatgaattgatgaa 301  Q
    |||||||||  ||| | ||||||||||||||||||||    
T  23089257 tgattgaaa-atataattgattggatgaattgatgaa 23089292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 66 - 301
Target Start/End: Original strand, 23101466 - 23101700
Alignment:
Q  66 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| ||||||||||||||||| |||   |||   |  ||||||||||||||||||| |    
T  23101466 ggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttgaggataaaattgagggttagggtttga 23101565  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 264  Q
    |||||||||||| |||||| ||||||||||| ||||||||   ||||||| | | |||| |||||||| |||||||| |  || || |||||||||||||    
T  23101566 tgatgattctgaggggaat-gggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgttgtgatcataaat 23101664  T
Q  265 tgattgaaatttatgaatgattggatgaattgatgaa 301  Q
    |||||||||  ||| | |||||||||||||| |||||    
T  23101665 tgattgaaa-atataattgattggatgaattcatgaa 23101700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 66 - 176
Target Start/End: Original strand, 5706027 - 5706137
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttagggtttaa 164  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||||| |    
T  5706027 ggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttga 5706125  T
Q  165 tgatgattctga 176  Q
    ||||||||||||    
T  5706126 tgatgattctga 5706137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 23265194 - 23265133
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23265194 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 23280262 - 23280201
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23280262 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 66 - 124
Target Start/End: Complemental strand, 21908411 - 21908353
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 124  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  21908411 ggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 24661629 - 24661576
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  24661629 ggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 10628 - 10577
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  10628 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 25180933 - 25180984
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  25180933 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 166
Target Start/End: Complemental strand, 26885233 - 26885133
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtt-ttggaaaataaattgagggttagggtttaa 164  Q
    |||||||||| || ||||| ||||||||| |||| ||||||||||||||||| | ||||| |  ||||| ||||| || ||||||||  ||||||| |||    
T  26885233 ggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagttcttggagaaaaaattgagaattagggtataa 26885135  T
Q  165 tg 166  Q
    ||    
T  26885134 tg 26885133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 66 - 301
Target Start/End: Original strand, 20437027 - 20437261
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |    
T  20437027 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 20437126  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 264  Q
    |||||||||||| ||||| |||||| ||||| ||||||||   ||||||| |||||||||||||||||||||||||| |  || || |||||||||||||    
T  20437127 tgatgattctgaggggaa-tgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaat 20437225  T
Q  265 tgattgaaatttatgaatgattggatgaattgatgaa 301  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  20437226 tgattgaaa-ttatgattgattggatgaattgatgaa 20437261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 58 - 176
Target Start/End: Complemental strand, 41112094 - 41111977
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||| |||||||  |||  |||||    
T  41112094 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaaagttag 41111996  T
Q  158 ggtttaatgatgattctga 176  Q
    ||||| |||||||||||||    
T  41111995 ggtttgatgatgattctga 41111977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 32651682 - 32651563
Alignment:
Q  8 gtgagatgaacaagtatagtcagagaatctggtcgttgtgcgttt-cttctaaaactatggtaagggtgagactatctctcaataatcataatctataat 106  Q
    |||||| ||||||||  |||||||||||| | |||||||| |||| ||||||||  || |||||||||||||||||||||||||||||||| | ||||||    
T  32651682 gtgagaagaacaagtggagtcagagaatccgatcgttgtgtgttttcttctaaat-taaggtaagggtgagactatctctcaataatcatagtatataat 32651584  T
Q  107 ttctgaaaattgacctaattg 127  Q
    ||||||||||||| |||||||    
T  32651583 ttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 18712851 - 18712790
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  18712851 ggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 19663520 - 19663572
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  19663520 ggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 10811786 - 10811839
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  10811786 ggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 20805373 - 20805320
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  20805373 ggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 11158145 - 11158093
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  11158145 ggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 20851136 - 20851187
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20851136 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 20857763 - 20857814
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20857763 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 21706327 - 21706276
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21706327 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 21710869 - 21710818
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21710869 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 66 - 301
Target Start/End: Original strand, 10199 - 10433
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 164  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  10199 ggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 10298  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 264  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| |  || || |||||||||||||    
T  10299 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaat 10397  T
Q  265 tgattgaaatttatgaatgattggatgaattgatgaa 301  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  10398 tgattgaaa-ttatgattgattggatgaattgatgaa 10433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 66 - 301
Target Start/End: Original strand, 1529 - 1763
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 164  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  1529 ggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 1628  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 264  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| |  || || |||||||||||||    
T  1629 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaat 1727  T
Q  265 tgattgaaatttatgaatgattggatgaattgatgaa 301  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  1728 tgattgaaa-ttatgattgattggatgaattgatgaa 1763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 58 - 301
Target Start/End: Complemental strand, 11401 - 11159
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata-aattgagggtta 156  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11401 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggtta 11302  T
Q  157 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 256  Q
    |||||| |||||||||||| |||||| || ||||||||| |||||||||  ||||||| | ||||||| ||||||| |||||||  |  || ||||||||    
T  11301 gggtttgatgatgattctggagggaa-tgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatccatactgttgctgtga 11203  T
Q  257 tcataaattgattgaaatttatgaatgattggatgaattgatgaa 301  Q
    ||| |||||||||||||  ||| | ||||||||||||||||||||    
T  11202 tcacaaattgattgaaa-atataattgattggatgaattgatgaa 11159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 58 - 302
Target Start/End: Complemental strand, 350 - 109
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  350 aaaactaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 252  T
Q  158 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 257  Q
    ||||| ||||||||||||| ||||| |||||||||||| ||||||||  |||||| |||  |||||||| |||| ||||||||| ||||  || ||||||    
T  251 ggtttgatgatgattctgaggggaa-tgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctatgttattgatgtgat 153  T
Q  258 cataaattgattgaaatttatgaatgattggatgaattgatgaat 302  Q
    ||||||||| |||||| |||||| || |||||| |||||||||||    
T  152 cataaattggttgaaa-ttatgattggttggataaattgatgaat 109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 58 - 302
Target Start/End: Complemental strand, 18229 - 17985
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggtta 156  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  18229 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcttagctttaggaaaataaattgagggtta 18130  T
Q  157 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtg 255  Q
     ||||||||||||||||| | ||||| | ||||||| || |||||||||   ||||||| | |||| |||||||||||||||| || ||||| |||||||    
T  18129 aggtttaatgatgattctaacgggaaat-ggtaatggtcatgttaattctgtttgtaatgtgatgtccagaatgaaaacttaacctatgttgttgctgtg 18031  T
Q  256 atcataaattgattgaaatttatgaatgattggatgaattgatgaat 302  Q
    ||||| |||||||||||||||  || ||||||||| |||||||||||    
T  18030 atcatgaattgattgaaattt-ggattgattggataaattgatgaat 17985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 108; Significance: 3e-54; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 10 - 145
Target Start/End: Complemental strand, 1039 - 904
Alignment:
Q  10 gagatgaacaagtatagtcagagaatctggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttc 109  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  1039 gagaagaacaagtatagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttc 940  T
Q  110 tgaaaattgacctaattgcttagttttggaaaataa 145  Q
    ||||||||||||||||||| |||| |||||| ||||    
T  939 tgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 10 - 145
Target Start/End: Complemental strand, 8184 - 8049
Alignment:
Q  10 gagatgaacaagtatagtcagagaatctggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttc 109  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  8184 gagaagaacaagtagagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttc 8085  T
Q  110 tgaaaattgacctaattgcttagttttggaaaataa 145  Q
    ||||||||||||||||||| |||| |||||| ||||    
T  8084 tgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 302
Target Start/End: Complemental strand, 899 - 806
Alignment:
Q  208 ttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaatttatgaatgattggatgaattgatgaat 302  Q
    ||||||| | |||||||||||||||||||||||| ||||| |||||||||||||||||||||| || ||||||  |||||||| |||||||||||    
T  899 ttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattggaa-ttatgagggattggataaattgatgaat 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 302
Target Start/End: Complemental strand, 8044 - 7951
Alignment:
Q  208 ttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaatttatgaatgattggatgaattgatgaat 302  Q
    ||||||| | |||||||||||||||||||||||| ||||| |||||||||||||||||||||| || ||||||  |||||||| |||||||||||    
T  8044 ttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattggaa-ttatgagggattggataaattgatgaat 7951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 66 - 301
Target Start/End: Original strand, 3296 - 3531
Alignment:
Q  66 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   ||||  |  ||||||||||||||||||| |    
T  3296 ggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggggataaaattgagggttagggtttga 3395  T
Q  165 tgatgattctgaagggaattgggtaatga-tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaa 263  Q
    |||||||||||| |||||| ||||||||| || ||||||||   ||||||| | ||||||||||||||| |||||||| |  || ||||||||||| |||    
T  3396 tgatgattctgaggggaat-gggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgctgtgatcacaaa 3494  T
Q  264 ttgattgaaatttatgaatgattggatgaattgatgaa 301  Q
    ||||||||||  ||| | ||||||||||||||||||||    
T  3495 ttgattgaaa-atataattgattggatgaattgatgaa 3531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 58 - 202
Target Start/End: Complemental strand, 30917 - 30772
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaat-aaattgagggtta 156  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||| |||    
T  30917 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaggtaaaattgaggatta 30818  T
Q  157 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaa 202  Q
    |||||| ||||||||| ||| |||||| | |||| |||| ||||||    
T  30817 gggtttgatgatgattttgaggggaatggtgtaacgatcatgttaa 30772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 66 - 301
Target Start/End: Original strand, 3625 - 3859
Alignment:
Q  66 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 164  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||||||| |    
T  3625 ggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttga 3724  T
Q  165 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 264  Q
    |||||||||||| ||| || ||||||||||| ||||||||   ||||||| | |||||| |||||||| |||||||| |  || || |||||||||||||    
T  3725 tgatgattctgagggggat-gggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatactgttgttgtgatcataaat 3823  T
Q  265 tgattgaaatttatgaatgattggatgaattgatgaa 301  Q
    |||||||||  ||| | ||||||||||||||||||||    
T  3824 tgattgaaa-atataattgattggatgaattgatgaa 3859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 222 - 309
Target Start/End: Complemental strand, 3558 - 3471
Alignment:
Q  222 tcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 309  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  3558 tcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaatttatgggtgattggatgaattgatgaatttgtgta 3471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 58 - 176
Target Start/End: Original strand, 1728 - 1845
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  1728 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 1826  T
Q  158 ggtttaatgatgattctga 176  Q
    ||||| |||||||||||||    
T  1827 ggtttgatgatgattctga 1845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 58 - 176
Target Start/End: Original strand, 5751 - 5868
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  5751 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 5849  T
Q  158 ggtttaatgatgattctga 176  Q
    ||||| |||||||||||||    
T  5850 ggtttgatgatgattctga 5868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 116998 - 116887
Alignment:
Q  16 aacaagtatagtcagagaatctggtcgttgtgcgttt-cttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaa 114  Q
    |||||||  |||||||||||| | |||||||| |||| ||||||||  || |||||||||||||||||||||||||||||||| | ||||||||||||||    
T  116998 aacaagtggagtcagagaatccgatcgttgtgtgttttcttctaaat-taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaa 116900  T
Q  115 attgacctaattg 127  Q
    ||||| |||||||    
T  116899 attgatctaattg 116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 66 - 174
Target Start/End: Original strand, 45278 - 45386
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttagggtttaa 164  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||||| |    
T  45278 ggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttga 45376  T
Q  165 tgatgattct 174  Q
    ||||||||||    
T  45377 tgatgattct 45386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 16872 - 16811
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  16872 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 11 - 72
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  11 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 13684 - 13623
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  13684 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 101931 - 101992
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    |||||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||    
T  101931 ggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 17695 - 17643
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  17695 ggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 40535 - 40587
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  40535 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 135525 - 135473
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  135525 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 22596 - 22646
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaat 116  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22596 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 34279 - 34331
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  34279 ggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 12349 - 12296
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  12349 ggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 1438 - 1378
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 126  Q
    ||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  1438 ggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 1378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 15000 - 15052
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 118  Q
    |||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  15000 ggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 39510 - 39563
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| |||||||| |||||||| ||||||||| |||||||||    
T  39510 ggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 1501 - 1453
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaa 114  Q
    |||||||||||||||| |||||||| ||| |||| ||||||||||||||    
T  1501 ggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 1916 - 1967
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  1916 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 9387 - 9336
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  9387 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 10290 - 10239
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    ||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  10290 ggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 135489 - 135438
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    |||||| |||||| ||||| |||||| ||||||| |||||||||||||||||    
T  135489 ggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 493032 - 493082
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 117  Q
    ||||||||||||| ||||| ||||||||| |||| |||||||||||||||||    
T  493032 ggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaatt 493082  T

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Target: scaffold2054 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 151
Target Start/End: Complemental strand, 774 - 680
Alignment:
Q  58 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgag 151  Q
    ||||||| |||||||||| || ||||| ||||| ||| |||| ||||||||||| |||||| ||||||  |  ||||| | ||||||||||||||    
T  774 aaaactaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattgag 680  T

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Target: scaffold0609 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 5861 - 5922
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 127  Q
    |||||||||| || ||||| ||||| || ||||| ||||||||||||||||| | |||||||    
T  5861 ggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattg 5922  T

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Target: scaffold0335 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 2631 - 2684
Alignment:
Q  66 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 119  Q
    |||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  2631 ggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

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