View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19490_high_16 (Length: 353)
Name: NF19490_high_16
Description: NF19490
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19490_high_16 |
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Alignment Details
Target: chr8 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 32 - 338
Target Start/End: Original strand, 43015792 - 43016098
Alignment:
| Q |
32 |
cctctaatttttattggtaatttaaatttcaataaagcatagcatttgattggaacatggatatataggcacgttaatttctaaagaaatgaacgtgatg |
131 |
Q |
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| T |
43015792 |
cctctaatttttattggtaatttaaatttcaataaagcatagcatttgattggaacatggatgtataggcacgttaatttctaaagaaatgaacgtgatg |
43015891 |
T |
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| Q |
132 |
tttcactagcagctatacattattaactttataattatatgaaatttcaacgttcggttggtaagtatacgcttttgcacaaaaagatgaaagaacatgc |
231 |
Q |
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| T |
43015892 |
tttcactagcagctatacattattaactttataattatatgaaatttcaacgttcggttggtaagtatacgcttttgcacaaaaagatgaaagaacatgc |
43015991 |
T |
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| Q |
232 |
atgaaattaagggttaaggaatgtgtagatcgagtgttgacatgattaataaacattgcttgcatacaccgaaaaattaaatttgtatggacctgaccgg |
331 |
Q |
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| T |
43015992 |
atgaaattaagggttaaggaatgtgtatatcgagtgttgacatgattaataaacattgcttgcatacaccgcaaaattaaatttgtatggacctgaccgg |
43016091 |
T |
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| Q |
332 |
atgataa |
338 |
Q |
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| T |
43016092 |
atgataa |
43016098 |
T |
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