View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19492_low_1 (Length: 666)

Name: NF19492_low_1
Description: NF19492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19492_low_1
NF19492_low_1
[»] chr1 (67 HSPs)
chr1 (13-628)||(23531395-23532030)
chr1 (149-238)||(5927355-5927444)
chr1 (155-293)||(48040418-48040560)
chr1 (168-297)||(48450550-48450672)
chr1 (168-240)||(398778-398850)
chr1 (153-241)||(1486721-1486809)
chr1 (174-238)||(18556471-18556535)
chr1 (146-238)||(21378531-21378622)
chr1 (219-297)||(2218264-2218347)
chr1 (159-238)||(14359537-14359614)
chr1 (146-297)||(35702542-35702689)
chr1 (180-297)||(22881567-22881689)
chr1 (168-240)||(6427324-6427396)
chr1 (174-238)||(46348398-46348462)
chr1 (153-240)||(10577748-10577835)
chr1 (195-297)||(13436459-13436562)
chr1 (249-299)||(5944365-5944415)
chr1 (251-297)||(21365992-21366038)
chr1 (251-297)||(22515827-22515873)
chr1 (176-238)||(22515902-22515964)
chr1 (175-298)||(35919225-35919359)
chr1 (247-297)||(37598900-37598950)
chr1 (146-240)||(39130780-39130874)
chr1 (247-297)||(46940748-46940798)
chr1 (158-227)||(1262848-1262917)
chr1 (146-292)||(3490352-3490497)
chr1 (167-295)||(25452108-25452234)
chr1 (202-299)||(28460776-28460873)
chr1 (247-299)||(1704933-1704985)
chr1 (170-234)||(21366039-21366103)
chr1 (146-238)||(31014995-31015087)
chr1 (169-296)||(9103615-9103741)
chr1 (262-297)||(9630561-9630596)
chr1 (169-240)||(34298411-34298482)
chr1 (146-238)||(38078676-38078769)
chr1 (248-295)||(42359391-42359438)
chr1 (168-234)||(2896140-2896206)
chr1 (168-238)||(5376515-5376585)
chr1 (247-297)||(6427544-6427594)
chr1 (247-297)||(9828124-9828174)
chr1 (152-238)||(10572604-10572690)
chr1 (247-297)||(18337398-18337448)
chr1 (251-297)||(18556385-18556431)
chr1 (159-261)||(22794071-22794172)
chr1 (146-184)||(24577249-24577287)
chr1 (146-240)||(34315665-34315758)
chr1 (195-237)||(39953162-39953204)
chr1 (247-297)||(40917829-40917879)
chr1 (247-297)||(46348323-46348373)
chr1 (251-297)||(51410098-51410144)
chr1 (177-238)||(1705007-1705068)
chr1 (177-258)||(1815240-1815321)
chr1 (159-240)||(5898279-5898359)
chr1 (176-245)||(7353501-7353570)
chr1 (248-297)||(15765828-15765877)
chr1 (195-240)||(40181872-40181917)
chr1 (186-238)||(113291-113343)
chr1 (247-295)||(1486646-1486694)
chr1 (168-241)||(5944255-5944330)
chr1 (176-292)||(12443422-12443537)
chr1 (168-240)||(15641043-15641115)
chr1 (200-252)||(16927186-16927238)
chr1 (247-295)||(17778622-17778670)
chr1 (196-240)||(34712396-34712440)
chr1 (180-240)||(36878447-36878507)
chr1 (262-298)||(38078600-38078636)
chr1 (159-238)||(40917716-40917793)
[»] chr6 (61 HSPs)
chr6 (153-297)||(7938075-7938219)
chr6 (146-238)||(8365534-8365626)
chr6 (146-238)||(12696277-12696368)
chr6 (169-297)||(7086770-7086904)
chr6 (168-297)||(9027152-9027286)
chr6 (146-240)||(9658832-9658925)
chr6 (249-303)||(10339048-10339102)
chr6 (146-240)||(30866157-30866251)
chr6 (159-297)||(426478-426608)
chr6 (153-238)||(16766656-16766741)
chr6 (195-294)||(9025448-9025552)
chr6 (248-296)||(17841530-17841578)
chr6 (174-238)||(17841604-17841668)
chr6 (146-241)||(3398571-3398665)
chr6 (159-238)||(10770689-10770767)
chr6 (146-296)||(31959112-31959268)
chr6 (168-258)||(8776968-8777058)
chr6 (169-239)||(8805586-8805656)
chr6 (195-281)||(21924907-21924993)
chr6 (159-240)||(5732523-5732604)
chr6 (159-240)||(34073360-34073441)
chr6 (146-238)||(853874-853966)
chr6 (249-297)||(13360313-13360361)
chr6 (159-238)||(7977845-7977924)
chr6 (159-238)||(9107385-9107464)
chr6 (159-238)||(34595099-34595178)
chr6 (178-240)||(7265606-7265668)
chr6 (247-297)||(8365448-8365498)
chr6 (247-297)||(8776908-8776958)
chr6 (247-297)||(28152167-28152217)
chr6 (248-297)||(9629464-9629513)
chr6 (180-236)||(10842518-10842574)
chr6 (168-208)||(21068199-21068239)
chr6 (174-238)||(21395323-21395386)
chr6 (168-240)||(33001302-33001374)
chr6 (168-239)||(31579239-31579310)
chr6 (149-184)||(35123625-35123660)
chr6 (146-236)||(6389695-6389785)
chr6 (247-297)||(6898221-6898271)
chr6 (146-240)||(7996391-7996485)
chr6 (146-240)||(8022316-8022410)
chr6 (174-240)||(10888987-10889053)
chr6 (168-238)||(16833282-16833352)
chr6 (247-297)||(17327590-17327640)
chr6 (171-241)||(17341676-17341746)
chr6 (192-257)||(32298603-32298668)
chr6 (264-297)||(32511606-32511639)
chr6 (195-252)||(32511667-32511724)
chr6 (159-238)||(3209347-3209426)
chr6 (262-298)||(3209483-3209519)
chr6 (249-297)||(4878014-4878061)
chr6 (192-240)||(7151410-7151458)
chr6 (247-299)||(7625185-7625237)
chr6 (249-297)||(7977770-7977818)
chr6 (248-300)||(9107296-9107348)
chr6 (262-298)||(9911481-9911517)
chr6 (172-240)||(19044442-19044510)
chr6 (176-240)||(26562671-26562735)
chr6 (174-238)||(28152079-28152142)
chr6 (204-240)||(32248938-32248974)
chr6 (247-299)||(34595203-34595255)
[»] chr2 (51 HSPs)
chr2 (146-297)||(20539632-20539781)
chr2 (146-239)||(21782832-21782925)
chr2 (169-254)||(21616737-21616822)
chr2 (247-300)||(26769591-26769644)
chr2 (146-240)||(23717979-23718072)
chr2 (146-240)||(24105651-24105744)
chr2 (146-238)||(19536412-19536505)
chr2 (174-295)||(42832234-42832355)
chr2 (172-240)||(31018568-31018636)
chr2 (146-238)||(21374714-21374807)
chr2 (159-238)||(30404865-30404943)
chr2 (169-240)||(34784995-34785066)
chr2 (172-238)||(6940233-6940299)
chr2 (172-238)||(18421941-18422007)
chr2 (247-297)||(35056948-35056998)
chr2 (247-297)||(37419823-37419873)
chr2 (146-215)||(21624218-21624287)
chr2 (248-297)||(34993922-34993971)
chr2 (153-258)||(40361749-40361854)
chr2 (262-298)||(10535684-10535720)
chr2 (169-245)||(30335392-30335468)
chr2 (253-297)||(44635568-44635612)
chr2 (201-240)||(2665901-2665940)
chr2 (175-238)||(24894370-24894433)
chr2 (248-299)||(29367281-29367332)
chr2 (249-295)||(2438661-2438707)
chr2 (146-240)||(20242740-20242833)
chr2 (247-297)||(27084338-27084388)
chr2 (169-239)||(28412325-28412395)
chr2 (174-240)||(30527608-30527674)
chr2 (146-208)||(33519738-33519800)
chr2 (169-239)||(36409641-36409711)
chr2 (247-297)||(38117099-38117149)
chr2 (247-297)||(42511322-42511372)
chr2 (249-298)||(11223792-11223841)
chr2 (247-292)||(12224292-12224337)
chr2 (146-238)||(14996238-14996330)
chr2 (168-245)||(15657838-15657915)
chr2 (248-297)||(15909570-15909619)
chr2 (174-239)||(16069268-16069333)
chr2 (249-306)||(18840944-18841001)
chr2 (247-296)||(28596538-28596587)
chr2 (195-240)||(28677910-28677955)
chr2 (173-238)||(30717545-30717610)
chr2 (248-301)||(32749750-32749803)
chr2 (249-297)||(6180790-6180838)
chr2 (169-245)||(12940943-12941019)
chr2 (248-300)||(24975252-24975304)
chr2 (208-240)||(28602361-28602393)
chr2 (180-240)||(31808063-31808123)
chr2 (174-238)||(37558957-37559021)
[»] chr5 (35 HSPs)
chr5 (146-241)||(22013366-22013461)
chr5 (146-210)||(19820437-19820501)
chr5 (168-238)||(21522724-21522794)
chr5 (168-238)||(21533290-21533360)
chr5 (146-297)||(2436880-2437030)
chr5 (174-299)||(14674249-14674370)
chr5 (159-297)||(6326253-6326391)
chr5 (168-238)||(21191071-21191141)
chr5 (159-241)||(25888305-25888389)
chr5 (146-238)||(6247574-6247666)
chr5 (146-238)||(21576760-21576847)
chr5 (247-297)||(21576685-21576735)
chr5 (168-238)||(24906316-24906386)
chr5 (248-294)||(39268541-39268587)
chr5 (251-297)||(39698625-39698671)
chr5 (249-298)||(19820327-19820376)
chr5 (170-234)||(19552562-19552626)
chr5 (146-238)||(37328859-37328951)
chr5 (149-233)||(40000555-40000639)
chr5 (170-300)||(22423761-22423895)
chr5 (247-298)||(31084397-31084448)
chr5 (153-235)||(13287417-13287499)
chr5 (168-241)||(14422878-14422949)
chr5 (247-297)||(14873591-14873641)
chr5 (174-240)||(16203808-16203874)
chr5 (174-240)||(27144443-27144509)
chr5 (201-238)||(33178032-33178069)
chr5 (168-241)||(36642774-36642847)
chr5 (177-238)||(39698524-39698585)
chr5 (168-245)||(41633709-41633786)
chr5 (153-238)||(41995430-41995515)
chr5 (165-245)||(12927625-12927705)
chr5 (249-297)||(17123119-17123166)
chr5 (247-295)||(21190998-21191046)
chr5 (174-238)||(43001780-43001844)
[»] scaffold0020 (1 HSPs)
scaffold0020 (146-297)||(135263-135419)
[»] chr3 (53 HSPs)
chr3 (169-299)||(11610496-11610630)
chr3 (150-258)||(8383213-8383321)
chr3 (159-293)||(10335249-10335380)
chr3 (146-238)||(55401027-55401119)
chr3 (162-241)||(14840303-14840382)
chr3 (146-252)||(14216845-14216950)
chr3 (146-252)||(14222974-14223079)
chr3 (141-258)||(8842277-8842393)
chr3 (146-238)||(8587036-8587128)
chr3 (146-297)||(32429331-32429487)
chr3 (247-297)||(25074864-25074914)
chr3 (247-297)||(40052381-40052431)
chr3 (247-297)||(55401144-55401194)
chr3 (192-257)||(4201394-4201459)
chr3 (174-293)||(10317998-10318113)
chr3 (146-239)||(25064861-25064954)
chr3 (146-238)||(14747513-14747606)
chr3 (172-271)||(10268468-10268567)
chr3 (159-238)||(28917966-28918045)
chr3 (247-297)||(21211363-21211413)
chr3 (159-261)||(24205034-24205135)
chr3 (174-252)||(25948888-25948966)
chr3 (247-297)||(41961579-41961629)
chr3 (195-240)||(11313813-11313858)
chr3 (246-295)||(25775575-25775624)
chr3 (248-297)||(34185052-34185101)
chr3 (259-299)||(8842410-8842450)
chr3 (195-239)||(27277852-27277896)
chr3 (195-238)||(1509540-1509583)
chr3 (246-297)||(3163971-3164022)
chr3 (249-296)||(8789489-8789536)
chr3 (159-238)||(15796309-15796388)
chr3 (177-240)||(49505167-49505230)
chr3 (168-238)||(3610607-3610677)
chr3 (247-297)||(8101892-8101942)
chr3 (159-237)||(14979147-14979224)
chr3 (249-299)||(20503536-20503586)
chr3 (168-238)||(26492220-26492290)
chr3 (247-297)||(27505320-27505370)
chr3 (181-238)||(4987306-4987363)
chr3 (153-238)||(4990982-4991067)
chr3 (195-240)||(7928451-7928496)
chr3 (159-240)||(10455755-10455836)
chr3 (201-238)||(14209120-14209157)
chr3 (248-292)||(1509637-1509681)
chr3 (159-235)||(3164043-3164119)
chr3 (247-295)||(4987222-4987270)
chr3 (148-236)||(10954911-10954994)
chr3 (177-245)||(18426932-18427000)
chr3 (247-295)||(28918072-28918120)
chr3 (200-240)||(38731224-38731264)
chr3 (249-297)||(40993275-40993323)
chr3 (202-238)||(55212971-55213007)
[»] scaffold0223 (1 HSPs)
scaffold0223 (146-238)||(20124-20216)
[»] chr8 (41 HSPs)
chr8 (153-238)||(2572071-2572156)
chr8 (201-298)||(4948659-4948755)
chr8 (168-238)||(8343290-8343360)
chr8 (159-238)||(22197757-22197836)
chr8 (153-240)||(24362215-24362302)
chr8 (195-272)||(14731713-14731791)
chr8 (168-238)||(20873043-20873113)
chr8 (168-297)||(27213521-27213644)
chr8 (177-241)||(15816141-15816205)
chr8 (180-240)||(39954292-39954352)
chr8 (251-298)||(11944749-11944796)
chr8 (168-227)||(22651950-22652009)
chr8 (146-241)||(25192359-25192454)
chr8 (159-241)||(926800-926882)
chr8 (168-238)||(29510319-29510389)
chr8 (146-227)||(13436990-13437071)
chr8 (179-252)||(30077388-30077461)
chr8 (146-238)||(4298901-4298992)
chr8 (180-240)||(13844609-13844669)
chr8 (249-297)||(18407790-18407838)
chr8 (146-238)||(31556949-31557040)
chr8 (168-240)||(34222922-34222993)
chr8 (148-232)||(41838144-41838228)
chr8 (246-297)||(22204711-22204762)
chr8 (248-299)||(29447525-29447576)
chr8 (145-240)||(34451050-34451144)
chr8 (251-297)||(949205-949251)
chr8 (247-293)||(5813661-5813707)
chr8 (200-238)||(8342978-8343016)
chr8 (146-240)||(13203593-13203687)
chr8 (247-297)||(29510233-29510283)
chr8 (158-240)||(33405397-33405479)
chr8 (146-184)||(40332157-40332195)
chr8 (153-238)||(4673440-4673525)
chr8 (167-240)||(12570521-12570594)
chr8 (248-297)||(22652057-22652106)
chr8 (159-240)||(28385007-28385088)
chr8 (248-297)||(30067968-30068017)
chr8 (146-210)||(126392-126455)
chr8 (249-297)||(13397622-13397670)
chr8 (174-238)||(36450769-36450833)
[»] scaffold0003 (2 HSPs)
scaffold0003 (159-239)||(241559-241639)
scaffold0003 (247-299)||(241674-241726)
[»] chr7 (48 HSPs)
chr7 (146-238)||(24105631-24105722)
chr7 (146-238)||(27944993-27945085)
chr7 (153-238)||(24339601-24339686)
chr7 (146-235)||(43027487-43027576)
chr7 (172-238)||(11061091-11061157)
chr7 (170-297)||(30813788-30813916)
chr7 (146-234)||(2034394-2034481)
chr7 (247-297)||(5409771-5409821)
chr7 (146-240)||(7328704-7328798)
chr7 (168-238)||(13770665-13770735)
chr7 (168-258)||(25481876-25481966)
chr7 (159-240)||(17851396-17851477)
chr7 (174-290)||(18215144-18215265)
chr7 (159-240)||(19206015-19206096)
chr7 (165-241)||(4017806-4017882)
chr7 (159-227)||(11722124-11722192)
chr7 (174-258)||(15680789-15680873)
chr7 (172-240)||(18013087-18013155)
chr7 (146-238)||(33994164-33994256)
chr7 (157-240)||(5235949-5236032)
chr7 (249-296)||(20549862-20549909)
chr7 (146-238)||(21864758-21864852)
chr7 (262-297)||(32093954-32093989)
chr7 (180-227)||(45056927-45056974)
chr7 (247-297)||(598277-598327)
chr7 (170-240)||(3721070-3721139)
chr7 (247-297)||(7133212-7133262)
chr7 (247-297)||(9778574-9778624)
chr7 (255-297)||(11738151-11738193)
chr7 (247-297)||(15680878-15680928)
chr7 (247-297)||(17852069-17852119)
chr7 (202-297)||(38143231-38143318)
chr7 (247-297)||(43027404-43027454)
chr7 (248-297)||(6490786-6490835)
chr7 (248-297)||(24105748-24105797)
chr7 (169-238)||(26733279-26733348)
chr7 (195-240)||(27093426-27093471)
chr7 (195-240)||(27184830-27184875)
chr7 (385-438)||(29865165-29865218)
chr7 (249-297)||(2334331-2334379)
chr7 (262-298)||(7328638-7328674)
chr7 (202-238)||(9408349-9408385)
chr7 (168-240)||(15902796-15902868)
chr7 (195-235)||(19213804-19213844)
chr7 (251-299)||(24339726-24339774)
chr7 (150-245)||(32094028-32094124)
chr7 (248-296)||(32287404-32287452)
chr7 (249-297)||(33994283-33994331)
[»] chr4 (44 HSPs)
chr4 (169-295)||(22440559-22440684)
chr4 (249-299)||(29205539-29205589)
chr4 (247-298)||(34306743-34306794)
chr4 (168-251)||(36635298-36635381)
chr4 (195-299)||(37203265-37203373)
chr4 (247-297)||(19482748-19482798)
chr4 (195-240)||(15029766-15029811)
chr4 (153-238)||(23293001-23293086)
chr4 (153-258)||(35157980-35158085)
chr4 (249-297)||(3064868-3064916)
chr4 (249-297)||(16184902-16184950)
chr4 (146-238)||(31800493-31800585)
chr4 (169-252)||(19482643-19482726)
chr4 (247-294)||(28084593-28084640)
chr4 (249-299)||(715543-715593)
chr4 (249-299)||(752869-752919)
chr4 (217-299)||(10499225-10499306)
chr4 (247-297)||(23292926-23292976)
chr4 (153-258)||(12895269-12895374)
chr4 (159-240)||(24343472-24343553)
chr4 (148-232)||(11651155-11651239)
chr4 (249-297)||(16073465-16073513)
chr4 (247-299)||(24343582-24343634)
chr4 (195-258)||(8423713-8423776)
chr4 (262-297)||(12895214-12895249)
chr4 (246-300)||(2361912-2361966)
chr4 (167-241)||(14126123-14126197)
chr4 (251-297)||(28964188-28964234)
chr4 (192-238)||(29205442-29205488)
chr4 (195-240)||(13134451-13134496)
chr4 (247-296)||(14465006-14465055)
chr4 (248-297)||(18513175-18513224)
chr4 (248-297)||(20633541-20633590)
chr4 (169-238)||(27706192-27706261)
chr4 (247-296)||(44081508-44081557)
chr4 (201-258)||(54580018-54580075)
chr4 (186-238)||(2361990-2362042)
chr4 (146-238)||(3947781-3947872)
chr4 (168-240)||(5414185-5414257)
chr4 (202-238)||(6485626-6485662)
chr4 (249-297)||(8423658-8423706)
chr4 (249-297)||(11596297-11596345)
chr4 (174-238)||(14465090-14465154)
chr4 (248-296)||(40965341-40965389)
[»] scaffold0053 (2 HSPs)
scaffold0053 (153-238)||(8757-8842)
scaffold0053 (247-299)||(8867-8919)
[»] scaffold0027 (1 HSPs)
scaffold0027 (168-297)||(46656-46776)
[»] scaffold0022 (1 HSPs)
scaffold0022 (157-245)||(90806-90894)
[»] scaffold0008 (1 HSPs)
scaffold0008 (153-241)||(263384-263472)
[»] scaffold0361 (1 HSPs)
scaffold0361 (247-298)||(14596-14647)
[»] scaffold0171 (1 HSPs)
scaffold0171 (146-241)||(23373-23467)
[»] scaffold0306 (1 HSPs)
scaffold0306 (146-238)||(13352-13444)
[»] scaffold0152 (1 HSPs)
scaffold0152 (146-238)||(21883-21975)
[»] scaffold0103 (1 HSPs)
scaffold0103 (174-238)||(51791-51855)
[»] scaffold0018 (1 HSPs)
scaffold0018 (147-238)||(178833-178925)
[»] scaffold0793 (1 HSPs)
scaffold0793 (249-299)||(4819-4869)
[»] scaffold0652 (2 HSPs)
scaffold0652 (153-238)||(477-562)
scaffold0652 (247-296)||(403-452)
[»] scaffold0450 (1 HSPs)
scaffold0450 (247-299)||(8562-8614)
[»] scaffold0279 (1 HSPs)
scaffold0279 (146-210)||(17913-17977)
[»] scaffold0475 (1 HSPs)
scaffold0475 (254-297)||(3384-3427)
[»] scaffold0512 (1 HSPs)
scaffold0512 (247-297)||(4976-5026)
[»] scaffold0380 (1 HSPs)
scaffold0380 (247-297)||(8670-8720)
[»] scaffold0227 (1 HSPs)
scaffold0227 (201-246)||(7318-7363)
[»] scaffold0057 (1 HSPs)
scaffold0057 (248-297)||(24107-24155)
[»] scaffold0021 (2 HSPs)
scaffold0021 (153-238)||(130441-130526)
scaffold0021 (249-297)||(2978-3026)
[»] scaffold0011 (1 HSPs)
scaffold0011 (201-238)||(17764-17801)
[»] scaffold0136 (1 HSPs)
scaffold0136 (249-297)||(3778-3826)


Alignment Details
Target: chr1 (Bit Score: 424; Significance: 0; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 424; E-Value: 0
Query Start/End: Original strand, 13 - 628
Target Start/End: Complemental strand, 23532030 - 23531395
Alignment:
Q  13 attatacttggaccatgactaagaatatatattatgactaagaacatctgaatggacaaacaaaaaagctaactactaagaacatgtactaatagcattc 112  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23532030 attatacttgaaccatgactaagaatatatattatgactaagaacatctgaatggacaaccaaaaaagctaactactaagaacatgtactaatagcattc 23531931  T
Q  113 aaat------agctacatactcctatactatgcaaccccatgaagcacggatacggatac------tggacacgacacggacaccgacactccaacactg 200  Q
    ||||      ||||||||||||||||||||||||||||| ||||||||||||||||| ||      ||||||||| ||||||||||||||| ||| ||||    
T  23531930 aaatgcagctagctacatactcctatactatgcaaccccgtgaagcacggatacggacacggacactggacacgatacggacaccgacacttcaatactg 23531831  T
Q  201 ctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagatg 300  Q
    |||||||||| |||||||||||||||| | |||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  23531830 ctaataatttgaaaatatcacataattcaatgtaattataaatgttcgcgtccgacactgaaacacgcttaatcggaggagtgttcgtgcttcatagatg 23531731  T
Q  301 caacctattaaattttctctccctttgttatcaacaagaaggatgagactaactaatggacagtaatgataaatccatttttgcagtatcaaaagtaagt 400  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||| |||||||||| ||  ||||||||||||||||||||||    
T  23531730 caacctattaaattttctctccctttattatcaacaagaagggtgagacaaactaatggacattaatgataaa-cctgttttgcagtatcaaaagtaagt 23531632  T
Q  401 attttagtttattgtatccacatggactcatgcgatatca-ttgtctttcaacaattattctagttttatgtttgaaaaagggttgtttttctatgaaaa 499  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23531631 attttagtttattgtatccacatggactcatgccatatcatttgtctttcaacaattattctagttttatgtttgaaaaagggttgtttttctatgaaaa 23531532  T
Q  500 gatctaagcattaaattgaaaacaata--aaagagataatattattgagatta----agtttcatgaactaatcctctaaagtattttttgatcgat--t 591  Q
    ||||||||||||||||||  |||||||  | |||||||||||| | |||||||    |||||||||||||||||||||||||||||| |||||||||  |    
T  23531531 gatctaagcattaaattgggaacaataacagagagataatattgtggagattaagctagtttcatgaactaatcctctaaagtatttcttgatcgattat 23531432  T
Q  592 atatactcgtaatgtctcaactatgacttgacttatt 628  Q
    |||||||| |||||||||||||||||||| |||||||    
T  23531431 atatactcttaatgtctcaactatgacttcacttatt 23531395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 5927444 - 5927355
Alignment:
Q  149 aagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||||||| || ||||||||||||||||| ||||| | ||||||||||||||||| |||| |||| |||||||| ||||||||    
T  5927444 aagcacggatacggacaccggacacgacacggacactgacacgctaacactgctaataatttgaaaaaatcatataatttaatgtaatta 5927355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 155 - 293
Target Start/End: Complemental strand, 48040560 - 48040418
Alignment:
Q  155 ggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaata-tcacataatttagtgtaattataaatgt---tcgtg 250  Q
    ||||||||| || ||||||||||||||||| ||||| || |||| | ||||||||| ||||   ||||||| |||||||||| || || |||   |||||    
T  48040560 ggatacggacaccggacacgacacggacactgacacgccgacacagataataatttgaaaaaggtcacatattttagtgtaaatacaagtgtcggtcgtg 48040461  T
Q  251 tccgacactgagacacgcctaatcggaggagtgttcgtgcttc 293  Q
    |||||||||| |||||||||||| |||||||||| ||||||||    
T  48040460 tccgacactgggacacgcctaattggaggagtgtccgtgcttc 48040418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 168 - 297
Target Start/End: Complemental strand, 48450672 - 48450550
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacactgagacacg 267  Q
    ||||||||||||||||| ||||| ||||||| ||||||||||| |||| || ||||||||||||||||||| ||      ||||| ||||| | ||||||    
T  48450672 ggacacgacacggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaa------gtgtcggacacag-gacacg 48450580  T
Q  268 cctaatcggaggagtgttcgtgcttcatag 297  Q
     |||||| ||||||||| ||||||||||||    
T  48450579 tctaatccgaggagtgtccgtgcttcatag 48450550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 398850 - 398778
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||||||||||||||| ||||| || |||| ||||||||||| |||| ||||||||||| ||||||||||||    
T  398850 ggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 1486809 - 1486721
Alignment:
Q  153 acggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataa 241  Q
    ||||| |||||||| ||| |||||||||| || ||||| |  |||| ||||||||||| |||| ||||||||||| |||||||||||||    
T  1486809 acggacacggataccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataa 1486721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 18556535 - 18556471
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||| ||||| || |||| ||||||||||| |||||||||||||||||| ||||||||    
T  18556535 gacacggacactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaatta 18556471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 21378531 - 21378622
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||||||| |||| |||||||||||||||||  ||||| || |||| |||||||| || |||| || |||||||| ||||||||||    
T  21378531 atgaagcacggatacagata-tggacacgacacggacatggacacaccgacacagctaataaattgaaaaaattacataattcagtgtaatta 21378622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 219 - 297
Target Start/End: Original strand, 2218264 - 2218347
Alignment:
Q  219 cacataatttagtgtaattataaatgt-----tcgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||||||||||| || |||     ||||||||||||||  ||||||||||||| ||||||||| ||||||||||||    
T  2218264 cacataatttagtgtaattacaagtgtcggtgtcgtgtccgacactaggacacgcctaatctgaggagtgtccgtgcttcatag 2218347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 14359614 - 14359537
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||| ||||||||||| ||||| ||||| || |||| ||||||||||| |||| ||||||||||||||||||||||    
T  14359614 acggatac-ggacacgacacagacacggacacgccgacacagctaataatttgaaaa-atcacataatttagtgtaatta 14359537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 297
Target Start/End: Complemental strand, 35702689 - 35702542
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt 245  Q
    |||||||||||||||||| || ||||||||||| ||||        || |||| ||||||||||| ||||  ||| |||||| |||||||||| || |||    
T  35702689 atgaagcacggatacggacaccggacacgacactgacatg------ccgacacagctaataatttgaaaacttcaaataattaagtgtaattacaagtgt 35702596  T
Q  246 tcgtgtccgacac--tgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
      ||||| |||||  || ||||||||||||| ||||||||| ||||||||||||    
T  35702595 cagtgtcggacacgatgggacacgcctaatccgaggagtgtccgtgcttcatag 35702542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 297
Target Start/End: Complemental strand, 22881689 - 22881567
Alignment:
Q  180 gacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtc-----cgacactgagacacgcctaatc 274  Q
    ||||| ||||| || ||||  |||||||||| |||| |||||||||||||||||||||| || |||  |||||     |||||| | |||||| ||||||    
T  22881689 gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacaccgggacacgtctaatc 22881590  T
Q  275 ggaggagtgttcgtgcttcatag 297  Q
     ||||||||| ||||||||||||    
T  22881589 cgaggagtgtccgtgcttcatag 22881567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 6427324 - 6427396
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||||| ||||||||| ||||| ||||||| ||||||||||| | || ||||||||||| | ||||||||||    
T  6427324 ggacacggcacggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattata 6427396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 46348462 - 46348398
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||| ||||| || |||| ||||||||||| |||| |||| |||||||||||||||||    
T  46348462 gacacggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaatta 46348398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 10577835 - 10577748
Alignment:
Q  153 acggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||| ||||| || ||||||||||||||||||||||| || |||| ||||||  ||||| || |||||| |||  ||||||||||||    
T  10577835 acggacacggacaccggacacgacacggacaccgacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattata 10577748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 13436459 - 13436562
Alignment:
Q  195 acactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacactgag-acacgcctaatcggaggagtgttcgtgcttc 293  Q
    |||||||||||||||| |  | ||||||||||| ||||||||||||  |||| ||||| |||||  || ||||| |||||| ||| ||||| ||||||||    
T  13436459 acactgctaataatttaaggaaatcacataattcagtgtaattatatgtgttggtgtcggacacgtagaacacgactaatccgagaagtgtccgtgcttc 13436558  T
Q  294 atag 297  Q
    ||||    
T  13436559 atag 13436562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 5944365 - 5944415
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagat 299  Q
    |||||||||| | || |||||||||| ||||||||||||||||||||||||    
T  5944365 tgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcatagat 5944415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 21366038 - 21365992
Alignment:
Q  251 tccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  21366038 tccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 21365992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 22515873 - 22515827
Alignment:
Q  251 tccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  22515873 tccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 22515964 - 22515902
Alignment:
Q  176 cacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||| ||||| |  |||| ||||||||||| |||| ||||||||||||||||||||||    
T  22515964 cacggacacggacacgcagacacagctaataatttgaaaaaatcacataatttagtgtaatta 22515902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 298
Target Start/End: Complemental strand, 35919359 - 35919225
Alignment:
Q  175 acacggacaccgacactccaacactgctaataattttaa-----aatatcacataatttagtgtaattataaatgt-----tcgtgtccgacact-gaga 263  Q
    ||||||||||| ||||||| ||||  |||||||||| ||     || ||||||||||| ||||||||||||| |||     ||||||| |||||  | ||    
T  35919359 acacggacaccaacactccgacacatctaataatttgaagaaaaaaaatcacataattcagtgtaattataagtgtccgtgtcgtgtcggacacgcggga 35919260  T
Q  264 cacgcctaatcggaggagtgttcgtgcttcataga 298  Q
    ||||||||||||||||| ||| |||||||||||||    
T  35919259 cacgcctaatcggaggactgtccgtgcttcataga 35919225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 37598900 - 37598950
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||||||| || ||||||||||||| ||||||||| ||||||||||||    
T  37598900 cgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatag 37598950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 39130874 - 39130780
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||||||||||||||| || |||||||||| ||| |  ||||| |  |||||  ||||||||||| || || | |||||||||||||||||||    
T  39130874 atgaagcacggatacggacaccggacacgacatggatattgacacgctgacactattaataattttagaaaattatataatttagtgtaattata 39130780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 46940798 - 46940748
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| |  |||||||||||| ||||||||||||||||||||||    
T  46940798 cgtgtccgacaccggaacacgcctaatccgaggagtgttcgtgcttcatag 46940748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 1262848 - 1262917
Alignment:
Q  158 tacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatt 227  Q
    ||||||||| |||||||||||| |||| ||||| || |||| ||||||||||| | || |||||||||||    
T  1262848 tacggataccggacacgacacgaacacggacacgccgacacagctaataatttgagaaaatcacataatt 1262917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 292
Target Start/End: Complemental strand, 3490497 - 3490352
Alignment:
Q  146 atgaagcacggatacggatactggacac--gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaat 243  Q
    |||||||||||||||||||||  |||||  ||||| ||||| ||||| || |||||||||||||||| | || |  |||| ||| |||||||||| || |    
T  3490497 atgaagcacggatacggatac-agacaccggacac-gacactgacacgccgacactgctaataatttgagaaaactacattattcagtgtaattacaagt 3490400  T
Q  244 gttcgtgtccgacactgagacacgcctaatcggaggagtgttcgtgctt 292  Q
    | |||||||||||| || |||||  |||||| ||| ||||| |||||||    
T  3490399 g-tcgtgtccgacattgggacacatctaatccgagaagtgtccgtgctt 3490352  T

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Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 295
Target Start/End: Complemental strand, 25452234 - 25452108
Alignment:
Q  167 tggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacactgagacac 266  Q
    |||||| ||||  ||||||||||  ||||||||||||||||||| | || ||| ||||||| |||||||||||   |||  ||||| ||||| |  ||||    
T  25452234 tggacatgacaaagacaccgacatgccaacactgctaataatttgagaaaatctcataattcagtgtaattat--gtgtcggtgtcagacaccggaacac 25452137  T
Q  267 gcctaatcggaggagtgttcgtgcttcat 295  Q
    |||||||  ||| ||||| ||||||||||    
T  25452136 gcctaattcgagcagtgtccgtgcttcat 25452108  T

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Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 299
Target Start/End: Original strand, 28460776 - 28460873
Alignment:
Q  202 taataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagat 299  Q
    ||||||||| | || |||| |||||| | |||||||||| |||| |||||||||||| || |||||||||||   |  ||| ||||||||||||||||    
T  28460776 taataatttcagaaaatcaaataattaaatgtaattatatatgtacgtgtccgacaccgaaacacgcctaattttaaaagtattcgtgcttcatagat 28460873  T

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Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 1704985 - 1704933
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagat 299  Q
    |||||||||||| |||||||||||||||  |||||||| | ||||||||||||    
T  1704985 cgtgtccgacaccgagacacgcctaatccaaggagtgtccatgcttcatagat 1704933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 21366103 - 21366039
Alignment:
Q  170 acacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgta 234  Q
    |||||||||| |||||||||| ||  ||| |||||||||||||||| || |||||||| ||||||    
T  21366103 acacgacacgaacaccgacacgccggcacagctaataattttaaaaaataacataattcagtgta 21366039  T

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Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 31014995 - 31015087
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||||| || || || || |||||||||| ||| ||| | || |||| ||||||||||| | || ||||||||||| ||||||||||    
T  31014995 atgaagcacggacacagacaccgggcacgacacgggcactgacgcgcctacacagctaataatttgagaaaatcacataattcagtgtaatta 31015087  T

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Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 296
Target Start/End: Original strand, 9103615 - 9103741
Alignment:
Q  169 gacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacactgagacacgc 268  Q
    |||| ||| ||||||| ||||| || |||| | ||||||||| |||| ||||||||||||||| ||| || || |||  ||||| ||||| || | ||||    
T  9103615 gacaggactcggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtttaa-tacaagtgtcggtgtcggacaccgaaaaacgc 9103713  T
Q  269 ctaatcggaggagtgttcgtgcttcata 296  Q
    ||||||  | |||||| |||||||||||    
T  9103714 ctaatcttaagagtgtccgtgcttcata 9103741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 262 - 297
Target Start/End: Complemental strand, 9630596 - 9630561
Alignment:
Q  262 gacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||||||||| ||||||||||||||||||||||    
T  9630596 gacacgcctaatccgaggagtgttcgtgcttcatag 9630561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 34298411 - 34298482
Alignment:
Q  169 gacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||||||||||| || ||||| || ||||  |||||||||| | || ||||||||||| ||||||||||||    
T  34298411 gacacgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaattata 34298482  T

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Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 38078769 - 38078676
Alignment:
Q  146 atgaagcacggatacggatactggacac--gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||||||||||| || ||||||  |||||| |||| |||||  | |||| ||||||||||| |||| ||||||||||| | ||||||||    
T  38078769 atgaagcacggatacggacac-ggacaccggacacgaacactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaatta 38078676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 295
Target Start/End: Complemental strand, 42359438 - 42359391
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcat 295  Q
    ||||||||||| | ||||||||||||| ||||||||| ||||||||||    
T  42359438 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 168 - 234
Target Start/End: Complemental strand, 2896206 - 2896140
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgta 234  Q
    |||||| |||||||||| ||||| || |||| ||||||||||| | || ||||||||||| ||||||    
T  2896206 ggacacaacacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 5376585 - 5376515
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||||||||||  |||| || |||| ||||||||||| | || || |||||||| ||||||||||    
T  5376585 ggacacgacacggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaatta 5376515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 6427544 - 6427594
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| | ||||||||||||| || |||||| ||||||||||||    
T  6427544 cgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatag 6427594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 9828124 - 9828174
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| | |||||| |||||| ||||||||| ||||||||||||    
T  9828124 cgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 9828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 10572690 - 10572604
Alignment:
Q  152 cacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||||| || |||||||||| | |||| ||||| || ||||  |||||||||| | || |||||||||||  |||||||||    
T  10572690 cacggatacggacaccggacacgacatgaacactgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaatta 10572604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 18337398 - 18337448
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||||| |||| |||| ||| ||||||||| ||||||||||||    
T  18337398 cgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcatag 18337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 18556431 - 18556385
Alignment:
Q  251 tccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||| ||||||||||||| ||| ||||| ||||||||||||    
T  18556431 tccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 18556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 22794172 - 22794071
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacac 258  Q
    |||||||| ||| ||||||  ||||| |||||  |||||| | ||||||||| |||| || |||||||  ||||||||||||  || |||||||||||||    
T  22794172 acggataccggatacgacatagacactgacacgtcaacacggataataatttgaaaaaatgacataatacagtgtaattataggtg-tcgtgtccgacac 22794074  T
Q  259 tga 261  Q
    |||    
T  22794073 tga 22794071  T

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Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 24577287 - 24577249
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacac 184  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  24577287 atgaagcacggatacggacactgaacacgacacggacac 24577249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 34315665 - 34315758
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||||||||||||||||| ||||||||||||||| || ||||  || |||| |||||   |||||||| |  ||||||||  |||||||||||    
T  34315665 atgaagcacggatacggata-tggacacgacacggatactgacatgccgacacagctaaattttttaaaaaactacataattcggtgtaattata 34315758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 39953204 - 39953162
Alignment:
Q  195 acactgctaataattttaaaatatcacataatttagtgtaatt 237  Q
    |||| ||||||||||||| || |||||||||||||||||||||    
T  39953204 acaccgctaataattttagaaaatcacataatttagtgtaatt 39953162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 40917829 - 40917879
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| | ||||||||||||| ||||| ||| ||||||||||||    
T  40917829 cgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcatag 40917879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 46348373 - 46348323
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| ||||||||||| ||| |||| |||| ||||||||||||    
T  46348373 cgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcatag 46348323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 51410098 - 51410144
Alignment:
Q  251 tccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||| |||||||||||||||  |||||| ||||||||||||||    
T  51410098 tccgacaccgagacacgcctaatccaaggagtattcgtgcttcatag 51410144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 1705068 - 1705007
Alignment:
Q  177 acggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||||||| || ||||  |||||||||| |||| ||||||||||| || |||||||    
T  1705068 acggacaccgacacaccgacacatctaataatttgaaaaaatcacataattcagggtaatta 1705007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 1815240 - 1815321
Alignment:
Q  177 acggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacac 258  Q
    |||||||| ||||| || ||||   |||| ||||||||| ||||||||||| |||||||||| || |||  |||||||||||    
T  1815240 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtgtcggtgtccgacac 1815321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 5898359 - 5898279
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||||| ||||| ||||| ||||| || || || |||| ||||||||| | |||| ||||||||||| ||||||||||||    
T  5898359 acggatac-ggacatgacacagacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattata 5898279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 7353570 - 7353501
Alignment:
Q  176 cacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt 245  Q
    |||| |||||||||| || || |||||| |||||  |||| || ||||||||||||||||||||| ||||    
T  7353570 cacgtacaccgacacaccgacgctgctattaattcgaaaaaattacataatttagtgtaattatatatgt 7353501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 15765828 - 15765877
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||| ||||||| ||||||||||||| || |||||| ||||||||||||    
T  15765828 gtgtctgacactgggacacgcctaatccgaagagtgtccgtgcttcatag 15765877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 40181872 - 40181917
Alignment:
Q  195 acactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||||||||||||| | || ||||||||||| ||||||||||||    
T  40181872 acactgctaataatttgagaaaatcacataattcagtgtaattata 40181917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 113291 - 113343
Alignment:
Q  186 gacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| || |||| ||||||||||| |||| ||||||||||| ||||||||||    
T  113291 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 113343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 1486694 - 1486646
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcat 295  Q
    |||||||||||| | ||||||||||||| |||||||||  |||||||||    
T  1486694 cgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 5944255 - 5944330
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaata--tcacataatttagtgtaattataa 241  Q
    ||||||||||| ||||| ||||| ||  ||| ||||||||||| |||| |  |||||||||| |||||||||||||    
T  5944255 ggacacgacacagacactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataa 5944330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 176 - 292
Target Start/End: Complemental strand, 12443537 - 12443422
Alignment:
Q  176 cacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacactgagacacgcctaatcg 275  Q
    |||||| || ||||| || |||| ||||||||||| | || ||||||||||| ||||||||| ||  ||  |||||| ||||| ||||||| |||||||     
T  12443537 cacggatacggacacgccgacacagctaataatttgagaaaatcacataattcagtgtaattgtatgtg-acgtgtcggacaccgagacacacctaatcc 12443439  T
Q  276 gaggagtgttcgtgctt 292  Q
    |||| || | |||||||    
T  12443438 gaggggtatccgtgctt 12443422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 15641115 - 15641043
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||| ||||||||||| ||||  || |||||||||||||||| | || ||||||| ||| ||||||| ||||    
T  15641115 ggacatgacacggacactgacatgccgacactgctaataatttaagaaaatcacatgattcagtgtaactata 15641043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 16927238 - 16927186
Alignment:
Q  200 gctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtc 252  Q
    ||||||||||| |||| |||| |||||| |||||||||||| ||||| |||||    
T  16927238 gctaataatttgaaaaaatcatataattcagtgtaattatatatgttggtgtc 16927186  T

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Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 17778622 - 17778670
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcat 295  Q
    |||||||||||| | |||| |||||||| ||| ||||||||||||||||    
T  17778622 cgtgtccgacaccgggacatgcctaatccgagaagtgttcgtgcttcat 17778670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 34712440 - 34712396
Alignment:
Q  196 cactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||||||||||||| | || || |||||||||||||||||||||    
T  34712440 cactgctaataatttgagaaaataacataatttagtgtaattata 34712396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 36878447 - 36878507
Alignment:
Q  180 gacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||| ||||| || |||| ||||||||||| | || ||||||||||| ||||||||||||    
T  36878447 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattata 36878507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 38078636 - 38078600
Alignment:
Q  262 gacacgcctaatcggaggagtgttcgtgcttcataga 298  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  38078636 gacacgcctaatccgaggagtattcgtgcttcataga 38078600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 40917716 - 40917793
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| || |||||||||||||| || ||||| || |||| ||||||||||| |||| |||||  |||| ||||||||||    
T  40917716 acggacaccggacacgacacggatactgacacgccgacacagctaataatttgaaaaaatcac--aattaagtgtaatta 40917793  T

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Target: chr6 (Bit Score: 73; Significance: 5e-33; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 153 - 297
Target Start/End: Original strand, 7938075 - 7938219
Alignment:
Q  153 acggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtc 252  Q
    ||||| ||||| || |||||||||| |||||| ||||| || |||| ||||||||||| |||| |||| |||||||||||||||||||| |||  |||||    
T  7938075 acggacacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtc 7938174  T
Q  253 cgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||| ||||||||||| ||| ||||||||| ||||||||||||    
T  7938175 cgacaccgagacacgcctgatccgaggagtgtccgtgcttcatag 7938219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 8365626 - 8365534
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||||||||||| ||  |||||||||||||||| ||||| || ||||  |||||||||| ||||||||||||||||  |||||||||    
T  8365626 atgaagcacggatacggacaccagacacgacacggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaatta 8365534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 12696277 - 12696368
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||||||||||| || ||||||||||||||||| ||||| || |||| ||||||||||| |||| || |||||||| ||||||||||    
T  12696277 atgaagcacggatacggacac-ggacacgacacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatta 12696368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 297
Target Start/End: Original strand, 7086770 - 7086904
Alignment:
Q  169 gacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt-----tcgtgtccgacac-tgag 262  Q
    |||||||||| |||||||||||  |  ||||||||||||||| | || ||||||||||||||||||||||||  |||     | ||||| ||||| ||||    
T  7086770 gacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcggtgtagtgtcagacacgtgag 7086869  T
Q  263 acacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||| |||||||| ||||||| | ||||||||||||    
T  7086870 acatgcctaatccgaggagtttccgtgcttcatag 7086904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 168 - 297
Target Start/End: Original strand, 9027152 - 9027286
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt-----tcgtgtccgacactgag 262  Q
    ||||||||||||||||| ||||| || |||| ||||||||||| | |  |||||||||||  |||||||||||  |||     ||||||||||||| | |    
T  9027152 ggacacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgtccgacaccggg 9027251  T
Q  263 acacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||| ||||||  ||||||||| |||||||||||    
T  9027252 acacggctaatccaaggagtgtttgtgcttcatag 9027286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 9658832 - 9658925
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||||||||||||| || || | ||||||||||||||| ||||| || |||| ||||||||||| | || ||||||||||| ||||||||||||    
T  9658832 atgaagcacggatacagacacag-acacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattata 9658925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 249 - 303
Target Start/End: Complemental strand, 10339102 - 10339048
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagatgcaa 303  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||| |||||    
T  10339102 tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataggtgcaa 10339048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 30866251 - 30866157
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||| ||| ||||||| || ||||| ||||| ||||||||||| ||||||| ||||||||||| | || ||||||||||| | ||||||||||    
T  30866251 atgaagtacgaatacggacaccggacatgacactgacaccgacacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattata 30866157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 297
Target Start/End: Complemental strand, 426608 - 426478
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacac 258  Q
    |||||||| ||||||||||||||||| ||||| || |||| | ||||||||| |||| ||||||||||| | |||||||| || |||  |||||          
T  426608 acggataccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtc------ 426515  T
Q  259 tgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
       ||||||||||||| ||||||||| ||||||||||||    
T  426514 --ggacacgcctaatctgaggagtgtccgtgcttcatag 426478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 16766656 - 16766741
Alignment:
Q  153 acggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| ||||| || |||||||||| |||||| ||||| || |||| ||||||||||| |||| ||||||||||| ||||||||||    
T  16766656 acggacacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 16766741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 195 - 294
Target Start/End: Complemental strand, 9025552 - 9025448
Alignment:
Q  195 acactgctaataattttaaaatatcacataatttagtgtaattataaatgt-----tcgtgtccgacactgagacacgcctaatcggaggagtgttcgtg 289  Q
    |||||||||||||||| | || ||||||||||| ||||||||||||  |||     ||||||||||||| | ||||||||||||| ||| ||||| ||||    
T  9025552 acactgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtccgacaccgggacacgcctaatccgagaagtgtccgtg 9025453  T
Q  290 cttca 294  Q
    |||||    
T  9025452 cttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 17841578 - 17841530
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcata 296  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  17841578 gtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 17841668 - 17841604
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||| ||||| || |||| ||||||||||| |||| ||||||||||||||||||||||    
T  17841668 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaatta 17841604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 3398571 - 3398665
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataa 241  Q
    |||||||| ||||||||| |  | ||||||||||||||| ||||| || |||| ||||||||||| |||| |||| |||||| |||||||||||||    
T  3398571 atgaagcatggatacggacatcgaacacgacacggacactgacacgccgacacagctaataatttgaaaa-atcatataattcagtgtaattataa 3398665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 10770767 - 10770689
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||| |||||||||| |||||| ||||| |||||||  |||||||||| |||| ||||||||||| ||||||||||    
T  10770767 acggatac-ggacacgacatggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaatta 10770689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 296
Target Start/End: Original strand, 31959112 - 31959268
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt 245  Q
    |||||||||||||||||| || ||||| |||||| |||| ||||| ||  ||| ||||||||||| |||| ||||||||||  |||||||||| || |||    
T  31959112 atgaagcacggatacggacac-ggacatgacacgaacactgacacgccgtcacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtgt 31959210  T
Q  246 -------tcgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcata 296  Q
             ||||||||||| | ||||| ||||||| ||||||||| |||||||||||    
T  31959211 cggcgacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 8777058 - 8776968
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacac 258  Q
    ||||||||||||||||| ||||| || ||||  |||||||||| |||| |||||| |||| |||||||||| || |||| ||||| |||||    
T  8777058 ggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcggacac 8776968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 8805656 - 8805586
Alignment:
Q  169 gacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattat 239  Q
    |||||||||| |||||||||||  |  ||||||||||||||| | || |||||||||||||||||||||||    
T  8805656 gacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattat 8805586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 21924993 - 21924907
Alignment:
Q  195 acactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacactgagacacgcctaatcggaggag 281  Q
    |||||||||||||||| | ||||||| |||||| ||||||||||||  |||  ||||| ||||| | ||||||||||||| ||||||    
T  21924993 acactgctaataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgtcggacaccgggacacgcctaatccgaggag 21924907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 5732604 - 5732523
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||| ||||||||||||| |||||| ||||| || |||| | ||||||||| | || |||||||| |||||||||||||||    
T  5732604 acggacactggacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattata 5732523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 34073441 - 34073360
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||| |||||||||||||||||||| ||||  ||||||  ||||||||||| | || ||| ||||||| ||||||||||||    
T  34073441 acggacactggacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaattata 34073360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 853966 - 853874
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| |||||||||||| || ||||||||||||||  | ||||| || ||||  |||||||||| |||| ||||||||||| |||| |||||    
T  853966 atgaatcacggatacggacaccggacacgacacggatgctgacacgccgacacaactaataatttgaaaaaatcacataattaagtgcaatta 853874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 13360361 - 13360313
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||||||||||||||||| || |||||| ||||||||||||    
T  13360361 tgtccgacactgagacacgcctaatccgaagagtgtccgtgcttcatag 13360313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 7977924 - 7977845
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| ||||||||||||| ||| || ||||| || |||| ||||||||||| |||| || |||||||| ||||||||||    
T  7977924 acggacactggacacgacatggatactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatta 7977845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 9107464 - 9107385
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| || |||||||||||||||||  |||| || |||| ||||||||||| |||| |||||| |||| ||||||||||    
T  9107464 acggacaccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaatta 9107385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 34595099 - 34595178
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| || ||||||||||||||||  ||||| || ||||  |||||||||| |||| ||||||||||| ||||||||||    
T  34595099 acggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatta 34595178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 7265668 - 7265606
Alignment:
Q  178 cggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||||| ||||| ||||||| ||||||||||| | || ||||||||||| ||||||||||||    
T  7265668 cggacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattata 7265606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 8365498 - 8365448
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||||| ||||||||||||| ||||||| | ||||||||||||    
T  8365498 cgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcatag 8365448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 8776958 - 8776908
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| ||||||| ||||||| ||||||||| ||||||||||||    
T  8776958 cgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcatag 8776908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 28152167 - 28152217
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| | |||| |||||||| ||||||||||||||||||||||    
T  28152167 cgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 9629464 - 9629513
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||||||||||| |||||| ||||||||| | ||||||||||    
T  9629464 gtgtccgacactgagacacgtctaatccgaggagtgtccatgcttcatag 9629513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 10842518 - 10842574
Alignment:
Q  180 gacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaat 236  Q
    ||||| ||||| || |||| ||||||||||| |||| ||||||||||||||||||||    
T  10842518 gacacggacacgccgacaccgctaataatttgaaaaaatcacataatttagtgtaat 10842574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 21068239 - 21068199
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataat 208  Q
    ||||||||||| ||||||||||| |||||||||||||||||    
T  21068239 ggacacgacacagacaccgacacgccaacactgctaataat 21068199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 21395386 - 21395323
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||| |||||||||||| ||||||| ||||||||||| | || || |||||||||||||||||||    
T  21395386 gacatggacaccgacacgccaacaccgctaataatttgagaaaat-acataatttagtgtaatta 21395323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 33001374 - 33001302
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||| |||||| ||  ||||| || |||||||||||||||| |||| ||||||||||| | ||||||||||    
T  33001374 ggacacaacacggtcaatgacacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattata 33001302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 31579310 - 31579239
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattat 239  Q
    |||||||||| |||||| | ||| ||||||| | ||||||||| | || ||||||||||| |||||||||||    
T  31579310 ggacacgacatggacactgccacaccaacaccgttaataatttgagaaaatcacataattcagtgtaattat 31579239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 184
Target Start/End: Complemental strand, 35123660 - 35123625
Alignment:
Q  149 aagcacggatacggatactggacacgacacggacac 184  Q
    ||||||||| ||||||||||||||||||||||||||    
T  35123660 aagcacggacacggatactggacacgacacggacac 35123625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 236
Target Start/End: Original strand, 6389695 - 6389785
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaat 236  Q
    |||||||||||| || || || |||||||||||||||||  |||| || |||| | ||||||||| | || || | |||||||||||||||    
T  6389695 atgaagcacggacacagacaccggacacgacacggacactcacacgccgacacggataataatttgagaaaatgatataatttagtgtaat 6389785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 6898271 - 6898221
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||| |||| || |||||||||||| || |||||||||||||||||||    
T  6898271 cgtgtccaacaccgaaacacgcctaatccgatgagtgttcgtgcttcatag 6898221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 7996485 - 7996391
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||||||| ||||| || || | ||| |||| |||||| ||||  || |||||||||||||||| | || |||| |||||| ||||||||||||    
T  7996485 atgaagcacagatacagacacagtacatgacaaggacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattata 7996391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 8022316 - 8022410
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||||||| ||||| || || | ||| |||| |||||| ||||  || |||||||||||||||| | || |||| |||||| ||||||||||||    
T  8022316 atgaagcacagatacagacacagtacatgacaaggacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattata 8022410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 10889053 - 10888987
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||||||||||||||    |||| ||||||||||| | || ||||||||||||||||| ||||||    
T  10889053 gacacggacaccgacacatagacaccgctaataatttgataaaatcacataatttagtgtgattata 10888987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 16833282 - 16833352
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||| ||||| ||||| || ||||  |||||||||| |||| |||||||| || ||||||||||    
T  16833282 ggacacgacacagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaatta 16833352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 17327640 - 17327590
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||| ||||| | ||||||||||||| ||||||||| ||||||||||||    
T  17327640 cgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 17327590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 17341746 - 17341676
Alignment:
Q  171 cacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataa 241  Q
    |||||||||| ||| ||||| || |||| | ||||||||| | || ||||||||||| |||||||||||||    
T  17341746 cacgacacgggcactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattataa 17341676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 257
Target Start/End: Complemental strand, 32298668 - 32298603
Alignment:
Q  192 ccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgaca 257  Q
    ||||||| ||||||||||| | |  ||||||||||||||||||||||||  |||| ||||| ||||    
T  32298668 ccaacaccgctaataatttaagatcatcacataatttagtgtaattatatgtgttggtgtcagaca 32298603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 297
Target Start/End: Complemental strand, 32511639 - 32511606
Alignment:
Q  264 cacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||||||||||||||||| ||||||||||||    
T  32511639 cacgcctaatcggaggagtgtccgtgcttcatag 32511606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 32511724 - 32511667
Alignment:
Q  195 acactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtc 252  Q
    |||| ||||||||||| | || ||||||||||| ||||||||||||| |||| |||||    
T  32511724 acaccgctaataatttaagaaaatcacataattcagtgtaattataagtgttggtgtc 32511667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 3209347 - 3209426
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaata-tcacataatttagtgtaatta 238  Q
    ||||| || |||||||||||| |||| ||||| || |||| ||||||||||| |||| | |||||||||||||||| ||||    
T  3209347 acggacaccggacacgacacg-acacagacacgccgacacagctaataatttgaaaaaaatcacataatttagtgttatta 3209426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 298
Target Start/End: Original strand, 3209483 - 3209519
Alignment:
Q  262 gacacgcctaatcggaggagtgttcgtgcttcataga 298  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  3209483 gacacgcctaatccgaggagtgtttgtgcttcataga 3209519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 4878014 - 4878061
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||| | ||||||||||||| ||||||||| ||||||||||||    
T  4878014 tgtccgacacag-gacacgcctaatccgaggagtgtccgtgcttcatag 4878061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 7151410 - 7151458
Alignment:
Q  192 ccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||||  |||||||||| |||| ||||||||||| ||||||||||||    
T  7151410 ccaacacctctaataatttgaaaaaatcacataattaagtgtaattata 7151458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 299
Target Start/End: Original strand, 7625185 - 7625237
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagat 299  Q
    |||||||||||| |  |||||| |||||  |||||||||||||||||||||||    
T  7625185 cgtgtccgacaccggaacacgcttaatccaaggagtgttcgtgcttcatagat 7625237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 7977818 - 7977770
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||  || ||||||||||||  |||||||||||||||||||||    
T  7977818 tgtccgacaacgaaacacgcctaatctaaggagtgttcgtgcttcatag 7977770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 9107348 - 9107296
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagatg 300  Q
    ||||||||||| | ||||| ||||||| ||||||||  |||||||||||||||    
T  9107348 gtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcatagatg 9107296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 9911517 - 9911481
Alignment:
Q  262 gacacgcctaatcggaggagtgttcgtgcttcataga 298  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  9911517 gacacgcctaatccgaggagtgttcatgcttcataga 9911481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 172 - 240
Target Start/End: Original strand, 19044442 - 19044510
Alignment:
Q  172 acgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||| |||||| ||||| || ||||  |||||||||| | |||||||||||||| ||||| ||||||    
T  19044442 acgacatggacactgacacgccgacacgactaataatttgagaatatcacataattcagtgttattata 19044510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 26562671 - 26562735
Alignment:
Q  176 cacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||| |||| ||||| || |||||||||| ||||| | || ||||||||||| ||||||||||||    
T  26562671 cacgaacacggacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattata 26562735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 28152079 - 28152142
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||| ||||| || |||  ||||||||||| |||| ||||||||||| ||||||||||    
T  28152079 gacacggacactgacacgccgacaaagctaataatttgaaaa-atcacataattcagtgtaatta 28152142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 32248974 - 32248938
Alignment:
Q  204 ataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||||||||| |||||||||||||| |||||||||    
T  32248974 ataattttaaaaaatcacataatttagggtaattata 32248938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 299
Target Start/End: Original strand, 34595203 - 34595255
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagat 299  Q
    |||||| ||||| | ||||| ||||||| ||||||||| ||||||||||||||    
T  34595203 cgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcatagat 34595255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 3e-25; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 146 - 297
Target Start/End: Complemental strand, 20539781 - 20539632
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt 245  Q
    |||||||||||||||||| |||||||||||||||||||| |||||  | |||| ||||||||||| |||| |||| ||||||||||||||||| || |||    
T  20539781 atgaagcacggatacggacactggacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgt 20539682  T
Q  246 tcgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
      |||| ||   | ||||||||||| ||| ||||||||| ||||||||||||    
T  20539681 cggtgt-cgtggc-gagacacgcctgatccgaggagtgtccgtgcttcatag 20539632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 146 - 239
Target Start/End: Complemental strand, 21782925 - 21782832
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattat 239  Q
    |||||||||| |||| || ||||||||||||||  |||| ||||| || |||||||||||||||| | || ||||||||||| |||||||||||    
T  21782925 atgaagcacgaatacagacactggacacgacacaaacactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 21616737 - 21616822
Alignment:
Q  169 gacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccg 254  Q
    |||||||||||||||| ||||| || |||| ||||||||||| | || ||||||||||| ||||||||||||  ||| ||||||||    
T  21616737 gacacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtacgtgtccg 21616822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 26769591 - 26769644
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagatg 300  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  26769591 cgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcatagatg 26769644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 23717979 - 23718072
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||||||||||||| || || ||||| ||||||||||| ||||| || |||| ||||||||||| | ||  |||||||||| ||||||||||||    
T  23717979 atgaagcacggatacagacac-ggacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattata 23718072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 24105651 - 24105744
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||||||||||||| || || ||||| ||||||||||| ||||| || |||| ||||||||||| | ||  |||||||||| ||||||||||||    
T  24105651 atgaagcacggatacagacac-ggacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattata 24105744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 19536505 - 19536412
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattt-taaaatatcacataatttagtgtaatta 238  Q
    ||||||||| |||||||| || ||||||||||||||||  ||||| || ||||  ||||||||||  |||| ||||||||||| ||||||||||    
T  19536505 atgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaatta 19536412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 42832355 - 42832234
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacactgagacacgcctaat 273  Q
    ||||||||| | ||||| || |||| ||||||||||| | || || ||||| || ||||||||||||| |||  ||||||||| | | ||||||||||||    
T  42832355 gacacggactcagacacaccgacaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtgtccgactccgggacacgcctaat 42832256  T
Q  274 cggaggagtgttcgtgcttcat 295  Q
    |  |||||||| | ||||||||    
T  42832255 ccaaggagtgtccttgcttcat 42832234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 240
Target Start/End: Original strand, 31018568 - 31018636
Alignment:
Q  172 acgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||| |||||| ||||| ||||||| ||||||||||| | || ||||||| ||||||||||||||||    
T  31018568 acgacatggacactgacacgccaacaccgctaataatttcagaaaatcacatgatttagtgtaattata 31018636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 21374807 - 21374714
Alignment:
Q  146 atgaagcacggatacggatactggacac--gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||||||||||| || ||||||  |||||||||||  |||| || |||| ||||||||||| |||| || |||||||| ||||||||||    
T  21374807 atgaagcacggatacggacac-ggacaccggacacggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatta 21374714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 30404943 - 30404865
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||| ||||| ||||||||||| ||||| || |||| | ||||||||| |||| ||||||||||| ||||||||||    
T  30404943 acggatac-ggacatgacacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaatta 30404865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 34785066 - 34784995
Alignment:
Q  169 gacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||||||||||||| ||||| || ||||  |||||  ||||| || ||||||||||||||||||||||||    
T  34785066 gacacgacacggacactgacacaccgacacaactaatttttttagaaaatcacataatttagtgtaattata 34784995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 6940233 - 6940299
Alignment:
Q  172 acgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||||| ||||| || |||| ||||||||||||||||  | |||||||| ||||||||||    
T  6940233 acgacacggacactgacacgccgacacagctaataattttaaaaagttacataattaagtgtaatta 6940299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 18421941 - 18422007
Alignment:
Q  172 acgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||||| ||||| || ||||   ||||||||| |||||||||||||||| ||||||||||    
T  18421941 acgacacggacactgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaatta 18422007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 35056948 - 35056998
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| || |||||||||||| ||||||||| ||||||||||||    
T  35056948 cgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcatag 35056998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 37419823 - 37419873
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| | ||||||||||||| ||||||||| ||||||||||||    
T  37419823 cgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 21624218 - 21624287
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaa 215  Q
    ||||||| |||||||||| || | ||||||||| ||||| ||||| || |||| ||||||||||||||||    
T  21624218 atgaagcccggatacggacaccgaacacgacacagacactgacacgccgacacagctaataattttaaaa 21624287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 34993971 - 34993922
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||||||||| ||||||||||||   |||||||||||||||||||||    
T  34993971 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcatag 34993922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 40361854 - 40361749
Alignment:
Q  153 acggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtc 252  Q
    ||||| |||||||| | ||||||||| || || ||||||   |||||  ||||||||| |||| || |||||||||||||||||||||  |||| |||||    
T  40361854 acggacacggataccgaacacgacacagatacggacactatgacactattaataatttgaaaaaattacataatttagtgtaattatatctgttggtgtc 40361755  T
Q  253 cgacac 258  Q
     |||||    
T  40361754 agacac 40361749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 10535720 - 10535684
Alignment:
Q  262 gacacgcctaatcggaggagtgttcgtgcttcataga 298  Q
    ||||||||||||| |||||||||||||||||||||||    
T  10535720 gacacgcctaatccgaggagtgttcgtgcttcataga 10535684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 30335392 - 30335468
Alignment:
Q  169 gacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt 245  Q
    ||||||||||||||||   ||| || ||||  |||||||||| |||| || ||||||||||||||||||| ||||||    
T  30335392 gacacgacacggacactagcacgccgacacaactaataatttgaaaaaatgacataatttagtgtaattacaaatgt 30335468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 44635568 - 44635612
Alignment:
Q  253 cgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||||    
T  44635568 cgacaccgagacacgcctaatctgaggagtgtccgtgcttcatag 44635612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 240
Target Start/End: Complemental strand, 2665940 - 2665901
Alignment:
Q  201 ctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  2665940 ctaataattttagaaaatcacataatttagtgtaattata 2665901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 24894370 - 24894433
Alignment:
Q  175 acacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||| ||||| || |||| ||||||||||| |||| ||||||||||| |||| |||||    
T  24894370 acacggacactgacacgccgacacagctaataatttaaaaaaatcacataattcagtgcaatta 24894433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 299
Target Start/End: Complemental strand, 29367332 - 29367281
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagat 299  Q
    ||||||||||| |||||| |||||||| ||||| |||| |||||||||||||    
T  29367332 gtgtccgacaccgagacatgcctaatccgaggaatgtttgtgcttcatagat 29367281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 2438707 - 2438661
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcat 295  Q
    |||||||||| | ||||||||||||| ||||||||| ||||||||||    
T  2438707 tgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 20242833 - 20242740
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||||||||||||||  || | |||||||| |||||| ||||| || ||||  |||||  ||||| || ||||||||||| ||||||||||||    
T  20242833 atgaagcacggatacgggcacag-acacgacatggacactgacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattata 20242740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 27084338 - 27084388
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||| |||| |||||||||||||||||||||||||   ||||||||||    
T  27084338 cgtgtccaacaccgagacacgcctaatcggaggagtgtctctgcttcatag 27084388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 28412325 - 28412395
Alignment:
Q  169 gacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattat 239  Q
    ||||||||||||||||  ||||  |||||| | ||||||||| | || ||||||||||| |||||||||||    
T  28412325 gacacgacacggacactaacacgtcaacaccgttaataatttgataaaatcacataattcagtgtaattat 28412395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 30527674 - 30527608
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||| ||||| ||||| || |||||| ||||||||| | || |||| |||||||||||||||||||    
T  30527674 gacactgacactgacacacccacactgttaataatttgagaaaatcatataatttagtgtaattata 30527608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 33519738 - 33519800
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataat 208  Q
    |||||||||||||||||| || ||||||||| |||| || ||||| || |||| |||||||||    
T  33519738 atgaagcacggatacggacaccggacacgacgcggatactgacacaccgacaccgctaataat 33519800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 36409711 - 36409641
Alignment:
Q  169 gacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattat 239  Q
    ||||||||||||| ||  |||  || |||| ||| ||||||| |||| |||||||||||||||||||||||    
T  36409711 gacacgacacggatactcacatgccgacaccgctgataatttgaaaaaatcacataatttagtgtaattat 36409641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 38117149 - 38117099
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| | ||||||||||||| |||| |||| ||||||||||||    
T  38117149 cgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 42511372 - 42511322
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| | |||||| |||||| ||||||||| ||||||||||||    
T  42511372 cgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 11223841 - 11223792
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcataga 298  Q
    |||| ||||| | ||||||||||||| ||||||||| |||||||||||||    
T  11223841 tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcataga 11223792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 12224292 - 12224337
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgctt 292  Q
    |||||||||||||| |||||||||||||  ||||||||| ||||||    
T  12224292 cgtgtccgacactgggacacgcctaatccaaggagtgtttgtgctt 12224337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 14996330 - 14996238
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaata-tcacataatttagtgtaatta 238  Q
    ||||||||||||||||||  | | ||| ||||||||||| ||||  || |||| ||||||||||| |||| | ||| |||||||||||||||||    
T  14996330 atgaagcacggatacggacgcag-acatgacacggacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaatta 14996238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 245
Target Start/End: Original strand, 15657838 - 15657915
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt 245  Q
    |||||||||||||||||  |||| || || |  ||||||||||  ||| ||||||||||| |||||||||| ||||||    
T  15657838 ggacacgacacggacactaacacgccgactcaactaataatttgtaaaaatcacataattcagtgtaattacaaatgt 15657915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 15909619 - 15909570
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||||||| | ||||||||||||  || |||||||||||||||||||    
T  15909619 gtgtccgacacagggacacgcctaattcgaagagtgttcgtgcttcatag 15909570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 16069333 - 16069268
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattat 239  Q
    ||||||||||| ||||| || |||| | ||||||||| |||| |||| |||||| |||||||||||    
T  16069333 gacacggacactgacacgccgacaccgttaataatttaaaaaaatcatataattcagtgtaattat 16069268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 18841001 - 18840944
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagatgcaacct 306  Q
    |||||||||| | ||||| ||||||| ||||||||| |||||||||||| ||| ||||    
T  18841001 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatagttgccacct 18840944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 28596538 - 28596587
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcata 296  Q
    |||||||||||||  ||||| ||||||| ||||||||| |||||||||||    
T  28596538 cgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 28677910 - 28677955
Alignment:
Q  195 acactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||| ||||||||||| |||| ||||||||||| ||||||||||||    
T  28677910 acaccgctaataatttgaaaaaatcacataattcagtgtaattata 28677955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 30717610 - 30717545
Alignment:
Q  173 cgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||||| ||||  || |||  ||||||||||| |||| ||||||||||| ||||||||||    
T  30717610 cgacacggacactgacaaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaatta 30717545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 32749803 - 32749750
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagatgc 301  Q
    ||||||||||||| ||||||||| |||  |||||||| || |||||||||||||    
T  32749803 gtgtccgacactgggacacgccttatctaaggagtgtccgcgcttcatagatgc 32749750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 6180838 - 6180790
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||| |||||||||| ||||||| ||||||| | ||||||||||||    
T  6180838 tgtccgatactgagacacacctaatctgaggagtttccgtgcttcatag 6180790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 12941019 - 12940943
Alignment:
Q  169 gacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt 245  Q
    |||||||||||||||| |||||    ||||  |||||||||| |||| |||| |||||| |||||||||| ||||||    
T  12941019 gacacgacacggacactgacacgttgacacaactaataatttgaaaaaatcatataattcagtgtaattacaaatgt 12940943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 24975304 - 24975252
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagatg 300  Q
    ||||||||||||| ||||   |||||| ||||||||| |||||||||||||||    
T  24975304 gtgtccgacactgggacaaatctaatctgaggagtgtccgtgcttcatagatg 24975252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 28602393 - 28602361
Alignment:
Q  208 ttttaaaatatcacataatttagtgtaattata 240  Q
    |||||||||||||||||||||| ||||||||||    
T  28602393 ttttaaaatatcacataatttaatgtaattata 28602361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 31808063 - 31808123
Alignment:
Q  180 gacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||| ||||| || |||| ||||||||||| | || ||||||||||| ||||||||||||    
T  31808063 gacactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattata 31808123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 37558957 - 37559021
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||| ||||| || |||| |||||||||||  ||| ||||||||||| | ||||||||    
T  37558957 gacacggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaatta 37559021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 7e-23; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 22013366 - 22013461
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataa 241  Q
    |||||||||||||||||| || ||||||||||||||||| ||||| || |||| |||||||||||  ||| || ||||||||||||||||||||||    
T  22013366 atgaagcacggatacggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaattacataatttagtgtaattataa 22013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 19820501 - 19820437
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattt 210  Q
    |||||||||||||||||| || ||||||||||||||||| |||||||| |||| |||||||||||    
T  19820501 atgaagcacggatacggacaccggacacgacacggacactgacactccgacaccgctaataattt 19820437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 21522724 - 21522794
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||||||||| ||||| || |||| |||||||||||||||| || |||||||| ||||||||||    
T  21522724 ggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaatta 21522794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 21533290 - 21533360
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||||||||| ||||| || |||| |||||||||||||||| || |||||||| ||||||||||    
T  21533290 ggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaatta 21533360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 297
Target Start/End: Original strand, 2436880 - 2437030
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt 245  Q
    |||||||||||||||||| || ||||||||||| |||||       || |||| |||||||||||  ||| |||||||||||   ||| ||||||  |||    
T  2436880 atgaagcacggatacggacaccggacacgacactgacacg------ccgacaccgctaataatttgcaaaaatcacataattcgttgtgattatatgtgt 2436973  T
Q  246 -----tcgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
         |||||||||||||  |||||||||||||| ||||||||||||||||||||||    
T  2436974 cggtgtcgtgtccgacaccaagacacgcctaatccgaggagtgttcgtgcttcatag 2437030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 14674249 - 14674370
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgaca--ctgagacacgccta 271  Q
    ||||||||||| ||||| || |||| ||||||||||| |||| |||||||||||||||||||||| ||      ||||| ||||  | ||||||| ||||    
T  14674249 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaa------gtgtcggacaggccgagacacaccta 14674342  T
Q  272 atcggaggagtgttcgtgcttcatagat 299  Q
    ||| |||||||||  |||||||||||||    
T  14674343 atccgaggagtgtctgtgcttcatagat 14674370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 297
Target Start/End: Complemental strand, 6326391 - 6326253
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacac 258  Q
    |||||||| ||||||||||||||||| ||||| || |||  |||| |||||| | || || |||||||| |||||||||| || |||  | ||| |||||    
T  6326391 acggataccggacacgacacggacactgacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaattacaagtgtcagcgtcggacac 6326292  T
Q  259 tgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
     |  |||||||||||  ||| ||||| ||||||||||||    
T  6326291 cggaacacgcctaattcgagaagtgtccgtgcttcatag 6326253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 21191141 - 21191071
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||||||||| ||||  || |||| ||||||||||| |||| ||||||||||| ||||||||||    
T  21191141 ggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 21191071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 25888389 - 25888305
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataatttt--aaaatatcacataatttagtgtaattataa 241  Q
    ||||| || |||||||||||||| || ||||| |||||||| |||||||||||  |||| |||| |||||| |||||||||||||    
T  25888389 acggacacaggacacgacacggatacagacacaccaacactactaataattttaaaaaaaatcatataattcagtgtaattataa 25888305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 6247574 - 6247666
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| ||||||| |||| || |||||||| ||| |||| ||||| || ||||  |||||||||| |||| ||||||||||| ||||||||||    
T  6247574 atgaaacacggatgcggacaccggacacgatacgcacactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaatta 6247666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 21576847 - 21576760
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||||||| || |||||||||||     |||| || || ||||||| ||||||||||| |||| ||||||||||| ||||||||||    
T  21576847 atgaagcacggatacagacactggacacga-----acactgatacgccaacacagctaataatttgaaaaaatcacataattcagtgtaatta 21576760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 21576735 - 21576685
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||| ||||||| ||||||||||||| ||||||||| ||||||||||||    
T  21576735 cgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 24906386 - 24906316
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||||| |||| ||||| ||||||| | ||||||||| |||| || |||||||| ||||||||||    
T  24906386 ggacacgacacgaacactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaatta 24906316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 39268587 - 39268541
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttca 294  Q
    ||||||||||||| ||||||||||||| ||||||||| |||||||||    
T  39268587 gtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 39698625 - 39698671
Alignment:
Q  251 tccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  39698625 tccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 19820376 - 19820327
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcataga 298  Q
    |||||||||| | ||||||||||||| ||||||||| |||||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcataga 19820327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 19552626 - 19552562
Alignment:
Q  170 acacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgta 234  Q
    ||||||||||||||| ||||| || |||| | ||||||||| |||| ||||||||||| ||||||    
T  19552626 acacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaagtgta 19552562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 37328951 - 37328859
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||||| ||||| || | ||||||||||||||| || || || |||| || ||||||||  ||| |||||| |||| ||||||||||    
T  37328951 atgaagcacggacacggacaccgaacacgacacggacactgatacaccgacacagcaaataatttgtaaaaatcacaaaattcagtgtaatta 37328859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 233
Target Start/End: Complemental strand, 40000639 - 40000555
Alignment:
Q  149 aagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgt 233  Q
    ||||||||||||||||| |||  ||||||||||||| ||||   | |||||  ||||||||| |||| ||||||||||| |||||    
T  40000639 aagcacggatacggatattgggtacgacacggacactgacatgtcgacactcttaataatttgaaaaaatcacataattcagtgt 40000555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 300
Target Start/End: Complemental strand, 22423895 - 22423761
Alignment:
Q  170 acacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt-----tcgtgtccgacactgagac 264  Q
    |||||||||||| || ||||| |  ||||| |||||||||| | || ||||||||||| | | |||||||| ||||     ||||||| |   ||| |||    
T  22423895 acacgacacggatactgacaccctgacactactaataatttgagaaaatcacataattcaatataattatatatgtcggtgtcgtgtcggtgtctg-gac 22423797  T
Q  265 acgcctaatcggaggagtgttcgtgcttcatagatg 300  Q
    |||||||||| ||||||||| |||||||||||||||    
T  22423796 acgcctaatccgaggagtgtccgtgcttcatagatg 22423761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 31084397 - 31084448
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcataga 298  Q
    |||||||||||||| |||| |||||||| ||||||||| |||| ||||||||    
T  31084397 cgtgtccgacactgggacatgcctaatccgaggagtgtccgtggttcataga 31084448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 13287499 - 13287417
Alignment:
Q  153 acggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaa 235  Q
    ||||| ||||| || |||||||||||||||||  ||||  | |||| | ||||||||| |||| ||||||||||| |||||||    
T  13287499 acggacacggacaccggacacgacacggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaa 13287417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 14422878 - 14422949
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataa 241  Q
    |||||||||| |||||| ||||| || | || |||||||||||  ||| ||||||||||| |||||||||||||    
T  14422878 ggacacgacaaggacactgacacaccgatacagctaataattt--aaaaatcacataattcagtgtaattataa 14422949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 14873591 - 14873641
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||| |||| | ||||||||||||| ||||||||| ||||||||||||    
T  14873591 cgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 14873641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 16203874 - 16203808
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||||||||  |||  || |||||||||||||||| | || ||| ||||||||||||||||||||    
T  16203874 gacacggacactaacatgccgacactgctaataatttgagaaaatctcataatttagtgtaattata 16203808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 27144443 - 27144509
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||| ||||| ||||| || |||| ||||||||||| |  | ||||||||||||||||||||||||    
T  27144443 gacacagacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattata 27144509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 33178032 - 33178069
Alignment:
Q  201 ctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  33178032 ctaataatttaaaaaaatcacataatttagtgtaatta 33178069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 36642847 - 36642774
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataa 241  Q
    ||||||||||||||||| ||||| || |||| | ||||||||| ||||  | ||||| |||||||||| |||||    
T  36642847 ggacacgacacggacactgacacgccgacacagttaataatttgaaaaagtgacatattttagtgtaaatataa 36642774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 39698524 - 39698585
Alignment:
Q  177 acggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||| ||||| |  |||| ||||||||||| |||| ||||||||||| ||||||||||    
T  39698524 acggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatta 39698585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 245
Target Start/End: Original strand, 41633709 - 41633786
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt 245  Q
    |||||| |||| || || |||||||| |||| ||||||||||| ||||  | |||||||| |||||||||| ||||||    
T  41633709 ggacaccacacagatactgacactccgacacagctaataatttgaaaaatttacataattcagtgtaattacaaatgt 41633786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 41995430 - 41995515
Alignment:
Q  153 acggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| ||||| |||||| ||||||| ||||| ||||| || ||||  |||||||||  |||| ||||||||||| | ||||||||    
T  41995430 acggacacggacactggatacgacacagacactgacacgccgacacaactaataattcgaaaaaatcacataattcaatgtaatta 41995515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 245
Target Start/End: Original strand, 12927625 - 12927705
Alignment:
Q  165 actggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt 245  Q
    |||||||| || || ||||| ||||| || |||  ||||||||||| | || |||| ||||||||||||||||||| ||||    
T  12927625 actggacatgatacagacacggacacaccgacatcgctaataatttgagaaaatcatataatttagtgtaattatatatgt 12927705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 17123119 - 17123166
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||| | ||||||||||||| ||||||||| ||||||||||||    
T  17123119 tgtccgacacgg-gacacgcctaatccgaggagtgtccgtgcttcatag 17123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 21191046 - 21190998
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcat 295  Q
    |||||||||| | | ||||||||||||| ||||||||| ||||||||||    
T  21191046 cgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 43001780 - 43001844
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||| ||||   | |||||||||||||||| |||| || |||||||| ||||||||||    
T  43001780 gacacggacactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaatta 43001844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 146 - 297
Target Start/End: Complemental strand, 135419 - 135263
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt 245  Q
    |||||||| ||||||||| || | | ||||||| |||||| |||| || |||||||||||||||| | || |||||||||||  |||||||||||  |||    
T  135419 atgaagcatggatacggacaccgaatacgacacagacaccaacacaccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgt 135320  T
Q  246 -----tcgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
         |||||||||||||   ||||||||||||| |||| |||||||||||||||||    
T  135319 cggtgtcgtgtccgacaccaggacacgcctaatctgaggcgtgttcgtgcttcatag 135263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 3e-19; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 169 - 299
Target Start/End: Original strand, 11610496 - 11610630
Alignment:
Q  169 gacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt----tcgtgtccgacactgagac 264  Q
    ||||| |||| || || ||||| ||||||| ||||||||||| |||| ||||||||||| |||||| ||| || |||    ||||||||||||  | |||    
T  11610496 gacacaacacagatactgacacgccaacaccgctaataatttaaaaaaatcacataattcagtgtagttacaagtgtcaagtcgtgtccgacatcgggac 11610595  T
Q  265 acgcctaatcggaggagtgttcgtgcttcatagat 299  Q
    |||||||||| ||||||||| ||||||||||||||    
T  11610596 acgcctaatctgaggagtgtccgtgcttcatagat 11610630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 150 - 258
Target Start/End: Original strand, 8383213 - 8383321
Alignment:
Q  150 agcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgt 249  Q
    |||||||| ||||| |||||||||||||||||||  ||||| || |||| ||||||||||| | || |||| |||||| ||||||||||||| |||  ||    
T  8383213 agcacggacacggacactggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggt 8383312  T
Q  250 gtccgacac 258  Q
    ||| |||||    
T  8383313 gtcggacac 8383321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 159 - 293
Target Start/End: Complemental strand, 10335380 - 10335249
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacac 258  Q
    ||||| || ||||||||||||||||| ||||| || ||||  |||||||||| ||||  ||||||| |||||||||| || || |||  ||||| | |||    
T  10335380 acggacaccggacacgacacggacactgacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcgggcac 10335281  T
Q  259 tgagacacgcctaatcggaggagtgttcgtgcttc 293  Q
       |||||||||||| |||||||||||||||||||    
T  10335280 ---gacacgcctaattggaggagtgttcgtgcttc 10335249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 55401027 - 55401119
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||| |||||||| || ||| ||||||||||||| || || || ||||  |||||||||| |||| ||||||||||||||||||||||    
T  55401027 atgaagcacagatacggacaccggatacgacacggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaatta 55401119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 14840382 - 14840303
Alignment:
Q  162 gatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataa 241  Q
    |||||||||||||||||||| |||||||| |||||||   ||||||||| | || ||||||||||| |||||||||||||    
T  14840382 gatactggacacgacacggataccgacacgccaacaccattaataatttcagaaaatcacataattcagtgtaattataa 14840303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 14216845 - 14216950
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt 245  Q
    ||||||||||||| |||| || | ||||||||||||||| |||||  | ||||  |||||||||||||||||||| |||||| |||||||||| || |||    
T  14216845 atgaagcacggatgcggacacag-acacgacacggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgt 14216943  T
Q  246 tcgtgtc 252  Q
     ||||||    
T  14216944 ccgtgtc 14216950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 14222974 - 14223079
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt 245  Q
    ||||||||||||| |||| || | ||||||||||||||| |||||  | ||||  |||||||||||||||||||| |||||| |||||||||| || |||    
T  14222974 atgaagcacggatgcggacacag-acacgacacggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgt 14223072  T
Q  246 tcgtgtc 252  Q
     ||||||    
T  14223073 ccgtgtc 14223079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 8842277 - 8842393
Alignment:
Q  141 accccatgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||| |||||||||||||||||| || ||| |||||||||| |  ||||  || |||| |||||||||||| ||| |||||||||||| |||||||||||    
T  8842277 accctatgaagcacggatacggacaccggatacgacacggaaattgacatgccgacaccgctaataattttgaaa-atcacataatttggtgtaattata 8842375  T
Q  241 aatgttcgtgtccgacac 258  Q
     ||||  ||||| |||||    
T  8842376 tatgtcggtgtcagacac 8842393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 8587128 - 8587036
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||| |||||||| || ||||| ||||||||||| ||||| || ||||  ||| |||||| |||| ||||||||||| ||||||||||    
T  8587128 atgaagcacagatacggacaccggacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaatta 8587036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 146 - 297
Target Start/End: Complemental strand, 32429487 - 32429331
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt 245  Q
    |||||||||| ||||||| || |||||| ||||| |||  |||||||| |||  ||||||||||| | || ||||||||||| |||| |||||||||| |    
T  32429487 atgaagcacgtatacggacaccggacacaacacgaacattgacactccgacaacgctaataatttaagaaaatcacataattcagtgcaattataaatat 32429388  T
Q  246 -----tcgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
         || ||||  | ||  ||||||| |||||||||||||||||||| ||||||||    
T  32429387 cggtgtcatgtcgaataccaagacacgtctaatcggaggagtgttcgtacttcatag 32429331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 25074864 - 25074914
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  25074864 cgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatag 25074914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 40052381 - 40052431
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| | ||||||||||||| ||||||||||||||||||||||    
T  40052381 cgtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcatag 40052431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 55401144 - 55401194
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  55401144 cgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 257
Target Start/End: Original strand, 4201394 - 4201459
Alignment:
Q  192 ccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgaca 257  Q
    ||||||| | ||||||||| |||| ||||||||||| |||||||||||| ||||| ||||||||||    
T  4201394 ccaacaccgttaataatttgaaaaaatcacataattaagtgtaattatatatgttggtgtccgaca 4201459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 10318113 - 10317998
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacactgagacacgcctaat 273  Q
    ||||||||||| ||||| || |||| ||||||||||| ||||  ||||||  |||||||||| ||||| |||  ||||| | |||   ||||||||||||    
T  10318113 gacacggacactgacacgccgacacagctaataatttgaaaaagtcacatt-tttagtgtaaatataagtgtcggtgtcgggcac---gacacgcctaat 10318018  T
Q  274 cggaggagtgttcgtgcttc 293  Q
     |||||||||||||||||||    
T  10318017 tggaggagtgttcgtgcttc 10317998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 146 - 239
Target Start/End: Original strand, 25064861 - 25064954
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattat 239  Q
    ||||| ||||| ||| || || ||||||||||| ||||  ||||| || |||| |||||| |||| |||| |||||||||||||||||||||||    
T  25064861 atgaaacacgggtacagacaccggacacgacacagacattgacacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaattat 25064954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 14747513 - 14747606
Alignment:
Q  146 atgaagcacggatacggatactggacac--gacacggacaccgacactccaacactgctaataattttaaaata-tcacataatttagtgtaatta 238  Q
    ||||||||||||||||||||| ||||||  |||||| |||| ||||| || |||| ||||||||||| |||| | |||||||||||||||||||||    
T  14747513 atgaagcacggatacggatac-ggacaccggacacg-acactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaatta 14747606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 172 - 271
Target Start/End: Complemental strand, 10268567 - 10268468
Alignment:
Q  172 acgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacactgagacacgccta 271  Q
    |||||| |||||| ||||| || |||| | ||||||||| |||| |||||||||||||||||||||| || |||  ||||| ||||| |  |||||||||    
T  10268567 acgacatggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcagacaccggaacacgccta 10268468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 28917966 - 28918045
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| || |||||||||||||| || ||||| || |||  ||||||||||| |||| ||||||||||| ||||||||||    
T  28917966 acggacaccggacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaatta 28918045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 21211363 - 21211413
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||||| ||||| ||||||| |||||||||| |||||||||||    
T  21211363 cgtgtccgacactgggacactcctaatccgaggagtgtttgtgcttcatag 21211413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 24205135 - 24205034
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacac 258  Q
    ||||| || ||||||||||||||||| ||||| || |||| | ||||||||| | || || |||||||  ||||||||||||| || ||||||| |||||    
T  24205135 acggacaccggacacgacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtg-tcgtgtcggacac 24205037  T
Q  259 tga 261  Q
    |||    
T  24205036 tga 24205034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 252
Target Start/End: Complemental strand, 25948966 - 25948888
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtc 252  Q
    ||||||||||| ||||  || | || ||||||||||| |||| ||||||||||| ||||||||||||| |||| |||||    
T  25948966 gacacggacactgacatgccgatacggctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtc 25948888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 41961629 - 41961579
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||||| ||||||||||||| ||| ||||| ||||||||||||    
T  41961629 cgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 41961579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 11313858 - 11313813
Alignment:
Q  195 acactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||||||||||||| | || ||||||||||||||||||||||||    
T  11313858 acactgctaataatttgagaaaatcacataatttagtgtaattata 11313813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 25775575 - 25775624
Alignment:
Q  246 tcgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcat 295  Q
    |||||||||||||   ||||||||||||| ||||||||||||||||||||    
T  25775575 tcgtgtccgacaccaggacacgcctaatccgaggagtgttcgtgcttcat 25775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 34185101 - 34185052
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||||||| | ||||||||||||| ||||||||| ||||||||||||    
T  34185101 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 8842410 - 8842450
Alignment:
Q  259 tgagacacgcctaatcggaggagtgttcgtgcttcatagat 299  Q
    |||||||||||||||| ||||||||| ||||||||||||||    
T  8842410 tgagacacgcctaatccgaggagtgtccgtgcttcatagat 8842450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 27277896 - 27277852
Alignment:
Q  195 acactgctaataattttaaaatatcacataatttagtgtaattat 239  Q
    |||||||||||||||| | || |||||||||||||||||||||||    
T  27277896 acactgctaataatttgagaaaatcacataatttagtgtaattat 27277852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 238
Target Start/End: Original strand, 1509540 - 1509583
Alignment:
Q  195 acactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||    
T  1509540 acacagctaataatttgaaaaaatcacataatttagtgtaatta 1509583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 3164022 - 3163971
Alignment:
Q  246 tcgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||||||||| ||||||||||||||  ||||||||| | ||||||||||    
T  3164022 tcgtgtccgacaccgagacacgcctaattcgaggagtgtccatgcttcatag 3163971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 8789536 - 8789489
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcata 296  Q
    |||| ||||| ||||||||||||||| ||||||||| |||||||||||    
T  8789536 tgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttcata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 15796388 - 15796309
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| || ||||||||||||||||  ||||| || |||| | ||||||||| |||| |||| |||||| ||||||||||    
T  15796388 acggacaccggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaatta 15796309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 49505230 - 49505167
Alignment:
Q  177 acggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||||||||||| |  | || ||||||||||| | || ||||||||||||||||||||||||    
T  49505230 acggacaccgacacgcagagaccgctaataatttgagaaaatcacataatttagtgtaattata 49505167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 3610607 - 3610677
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||| ||||| ||||| ||||||| | ||||||||| |||| || |||||| | ||||||||||    
T  3610607 ggacacgacacagacactgacacgccaacacagttaataatttaaaaaaataacataactcagtgtaatta 3610677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 8101942 - 8101892
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||| |||||||  ||||| |||||| ||||||||||||||||||||||    
T  8101942 cgtgtcggacactggtacacgtctaatctgaggagtgttcgtgcttcatag 8101892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 14979147 - 14979224
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatt 237  Q
    |||||||| |||||||||| |||||  | ||| || |||| ||||||||||| |||| ||||||||||| |||||||||    
T  14979147 acggatac-ggacacgacaaggacaatggcacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 20503536 - 20503586
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagat 299  Q
    |||| ||||| | ||||||||||||| ||||||||| ||||||||||||||    
T  20503536 tgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcatagat 20503586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 26492290 - 26492220
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||||||||| ||||| || |||  ||||||||||| |||| |||| | |||| ||||||||||    
T  26492290 ggacacgacacggacactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaatta 26492220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 27505320 - 27505370
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| | |||| |||||||| ||||||||| ||||||||||||    
T  27505320 cgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 4987363 - 4987306
Alignment:
Q  181 acaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||| ||||| || |||| ||||||||||| |||| ||||||||||| ||||||||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 4987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 4991067 - 4990982
Alignment:
Q  153 acggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| ||||| || | |||||||||||| || |||||||| |||| ||||||| ||| | || || |||||||| ||||||||||    
T  4991067 acggacacggacaccgaacacgacacggagactgacactccgacaccgctaatagtttgagaaaattacataattcagtgtaatta 4990982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 7928451 - 7928496
Alignment:
Q  195 acactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||| ||||||||||| |||| ||||||||||| ||||||||||||    
T  7928451 acaccgctaataatttgaaaaaatcacataattcagtgtaattata 7928496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 10455755 - 10455836
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||| |||||||||||||| | ||  ||||| ||||||||||||||||| | | || |||| |||| | ||||||||||||    
T  10455755 acggacactggacacgacacaggcattgacacgccaacactgctaataatatgagaaaatcatataactaagtgtaattata 10455836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 14209120 - 14209157
Alignment:
Q  201 ctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  14209120 ctaataattttaaaaaatcacataattcagtgtaatta 14209157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 1509637 - 1509681
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgctt 292  Q
    ||||||||||| |  |||||||||||||||||||||| |||||||    
T  1509637 gtgtccgacaccggtacacgcctaatcggaggagtgtccgtgctt 1509681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 3164119 - 3164043
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaa 235  Q
    ||||| || ||||||||||||||||  | |||  | |||| ||||||||||| |||| ||||||||||| |||||||    
T  3164119 acggacaccggacacgacacggacaatggcacgtcgacacagctaataatttgaaaaaatcacataattcagtgtaa 3164043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 4987270 - 4987222
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcat 295  Q
    |||||||||||| | ||||||||||||| ||||||||| ||| ||||||    
T  4987270 cgtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 10954911 - 10954994
Alignment:
Q  148 gaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaat 236  Q
    |||||||||||||||| || ||||||||     |||| ||||| || ||||  |||||||||| |||| ||||||||||| ||||||||    
T  10954911 gaagcacggatacggacaccggacacga-----acactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaat 10954994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 18426932 - 18427000
Alignment:
Q  177 acggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt 245  Q
    |||||||| ||||| || ||||  |||||||||| |||| |||||||||||  ||||||||||| ||||    
T  18426932 acggacacggacacgccgacaccactaataatttcaaaaaatcacataattcggtgtaattatatatgt 18427000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 28918072 - 28918120
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcat 295  Q
    |||||||||||||| |||||||||||||  |||||||| | ||||||||    
T  28918072 cgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 38731224 - 38731264
Alignment:
Q  200 gctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||||||||||||| ||||||||||| |||||| |||||    
T  38731224 gctaataattttaaaaaatcacataattcagtgtagttata 38731264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 40993323 - 40993275
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||| | ||||||||||||| ||||||||| | ||||||||||    
T  40993323 tgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcatag 40993275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 55212971 - 55213007
Alignment:
Q  202 taataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||||||| |||||||||||||||| |||||    
T  55212971 taataattttaaaaaatcacataatttagtgcaatta 55213007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 20124 - 20216
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||| |||||||| || ||||||||||||||||  ||||| || |||| ||||||||||| |||| ||||||||||| ||||||||||    
T  20124 atgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 20216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 7e-17; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 2572156 - 2572071
Alignment:
Q  153 acggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| ||||| ||||||||||||||||| ||||||||  | ||||  |||||||||| |||| ||||||||||||||||||||||    
T  2572156 acggacacggacactggacacgacacggataccgacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaatta 2572071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 201 - 298
Target Start/End: Original strand, 4948659 - 4948755
Alignment:
Q  201 ctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcataga 298  Q
    |||||||||| |||| ||||||||||| |||||||||| || |||  ||||| ||||| |||||||||||||||| | |||||| |||||||||||||    
T  4948659 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacac-gagacacgcctaatcgaatgagtgtacgtgcttcataga 4948755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 8343290 - 8343360
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||| ||||||||||| || |||  ||||||||||| |||| ||||||||||||||||||||||    
T  8343290 ggacacgacactgacaccgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaatta 8343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 22197836 - 22197757
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| || ||||||||||| |||||  |||| ||||||| ||||||||||| ||||  |||||||||||||||||||||    
T  22197836 acggacaccggacacgacacagacactaacacgccaacacagctaataatttgaaaaattcacataatttagtgtaatta 22197757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 24362302 - 24362215
Alignment:
Q  153 acggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||||||||| || ||| ||||||| ||||||||||| || |||| ||||||||||| | |  ||||||||||| ||||||||||||    
T  24362302 acggatacggacaccggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattata 24362215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 272
Target Start/End: Original strand, 14731713 - 14731791
Alignment:
Q  195 acactgctaataattttaaaatatcacataatttagtgtaattataaatgt-tcgtgtccgacactgagacacgcctaa 272  Q
    |||||||||||||||| | || ||||||||||||||||||||||||  ||| |||||||||||||   |||||||||||    
T  14731713 acactgctaataatttgagaaaatcacataatttagtgtaattatatgtgtgtcgtgtccgacaccaggacacgcctaa 14731791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 20873043 - 20873113
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||||||||| ||||| || |||  | ||||||||| |||| ||||||||||||||||||||||    
T  20873043 ggacacgacacggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaatta 20873113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 297
Target Start/End: Original strand, 27213521 - 27213644
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacactgagacacg 267  Q
    |||||||||||||| || ||||| || |||||||||||||||| | || ||||||||||| | ||||||||||       ||||| ||||| | ||||||    
T  27213521 ggacacgacacggatacagacacgccgacactgctaataatttcagaaaatcacataattcactgtaattata------tgtgtcggacaccgggacacg 27213614  T
Q  268 cctaatcggaggagtgttcgtgcttcatag 297  Q
     |||||| ||| ||||| ||||||||||||    
T  27213615 gctaatccgagaagtgtccgtgcttcatag 27213644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 15816205 - 15816141
Alignment:
Q  177 acggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataa 241  Q
    |||||||| ||||| || ||||  |||||||||| |||| |||||||||||||||||||||||||    
T  15816205 acggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataa 15816141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 39954352 - 39954292
Alignment:
Q  180 gacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||||||||| || |||| ||||||||||| | || ||||||||||||||||||||||||    
T  39954352 gacaccgacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattata 39954292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 251 - 298
Target Start/End: Original strand, 11944749 - 11944796
Alignment:
Q  251 tccgacactgagacacgcctaatcggaggagtgttcgtgcttcataga 298  Q
    |||||||| ||||||||||||||| || ||||||||||||||||||||    
T  11944749 tccgacaccgagacacgcctaatccgatgagtgttcgtgcttcataga 11944796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 22651950 - 22652009
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatt 227  Q
    ||||||||||||||||| ||||| || |||| ||||||||||| |||| |||||||||||    
T  22651950 ggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatt 22652009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 25192454 - 25192359
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataa 241  Q
    |||||||||| ||||||| |  |||||||| |||||||| ||||| || |||| ||||||||||| ||||  | |||||||| ||| |||||||||    
T  25192454 atgaagcacgaatacggacatcggacacgatacggacactgacacgccgacacagctaataatttgaaaaagtgacataattcagtataattataa 25192359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 926882 - 926800
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataa 241  Q
    ||||| || ||||||||||||||||| ||||| |||||||| |||||||||| | || ||| |||  || |||||||||||||    
T  926882 acggacaccggacacgacacggacactgacacgccaacactcctaataatttgagaaaatctcattgttcagtgtaattataa 926800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 29510389 - 29510319
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||||||||| ||||| || |||| ||||||||||| |||| |||||| |||| ||| ||||||    
T  29510389 ggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataatta 29510319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 13437071 - 13436990
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatt 227  Q
    |||||||||||| | ||| || ||||| |||| |||||| ||||| || |||| ||||||||||| |||| |||||||||||    
T  13437071 atgaagcacggacatggacaccggacatgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataatt 13436990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 30077461 - 30077388
Alignment:
Q  179 ggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtc 252  Q
    |||||| ||||| ||||| | ||||||||||| |||| ||||||||||| |||||||||| || ||| ||||||    
T  30077461 ggacacggacacgccaacgcagctaataatttgaaaacatcacataattcagtgtaattacaagtgtccgtgtc 30077388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 4298992 - 4298901
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||||||| ||| || ||||||||||| || ||  |||| || |||| | ||||||||| |||| ||||||||||||| ||||||||    
T  4298992 atgaagcacggatatggacac-ggacacgacacagatactaacacgccgacacagttaataatttgaaaaaatcacataatttaatgtaatta 4298901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 13844669 - 13844609
Alignment:
Q  180 gacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||| ||||| || |||||||||||||||| | || ||||||||||| ||||||||||||    
T  13844669 gacacggacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattata 13844609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 18407790 - 18407838
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||  |||||||||||| |||||||||| ||||||||||||    
T  18407790 tgtccgacactaggacacgcctaattggaggagtgtccgtgcttcatag 18407838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 31556949 - 31557040
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||| ||||||||||| || ||||| |||| || ||| ||||| || |||| | ||||||||| |||| ||||||||||| ||||||||||    
T  31556949 atgaagtacggatacggacaccggacatgacatggtcactgacacgccgacacagttaataatttgaaaa-atcacataattcagtgtaatta 31557040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 34222922 - 34222993
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||||||||| |||||||||  ||||||  ||||||||||| | || ||||||||||| ||||||||||||    
T  34222922 ggacacgacacgaacaccgacag-ccaacatcgctaataatttaataaaatcacataattaagtgtaattata 34222993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 232
Target Start/End: Complemental strand, 41838228 - 41838144
Alignment:
Q  148 gaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtg 232  Q
    |||||||||||||||| |   ||||||| |||||||| |||||  | |||| ||||||||||| |||| ||||||||||| ||||    
T  41838228 gaagcacggatacggacataagacacgatacggacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtg 41838144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 22204711 - 22204762
Alignment:
Q  246 tcgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||||||||||||| ||||||  |||||||||| ||||| ||||    
T  22204711 tcgtgtccgacactgagacacgtctaatccaaggagtgttcatgctttatag 22204762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 299
Target Start/End: Original strand, 29447525 - 29447576
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagat 299  Q
    ||||||||||| | |||| | |||||||||||||||| ||||||||||||||    
T  29447525 gtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcatagat 29447576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 240
Target Start/End: Complemental strand, 34451144 - 34451050
Alignment:
Q  145 catgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||||||||||||||||| || ||||||||||||| ||||||||| |  |||| ||||||  ||||  || |||||| |||  ||||||||||||    
T  34451144 catgaagcacggatacggacac-ggacacgacacgggcaccgacacactgacacagctaattttttttgaaaatcacaaaatgcagtgtaattata 34451050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 949251 - 949205
Alignment:
Q  251 tccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||| ||||||| ||||||| ||||| ||||||||||||||||    
T  949251 tccgacaccgagacactcctaatctgaggaatgttcgtgcttcatag 949205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 5813661 - 5813707
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttc 293  Q
    |||||||||||| | |||||||||||| |||||||||| ||||||||    
T  5813661 cgtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttc 5813707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 8342978 - 8343016
Alignment:
Q  200 gctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  8342978 gctaataatttgaaaaaatcacataatttagtgtaatta 8343016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 13203593 - 13203687
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||||||||||||||||||  ||||||||||  |||| || ||  |||||   |||||||||| | || || |||||||| ||||||||||||    
T  13203593 atgaagcacggatacggatacccgacacgacacaaacactgatacgtcaacaacactaataatttgagaaaattacataattcagtgtaattata 13203687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 29510283 - 29510233
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| | ||||| ||||||| ||||||||| ||||||||||||    
T  29510283 cgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 29510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 33405479 - 33405397
Alignment:
Q  158 tacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||| ||||||||||||| |||||| ||||| |   | ||| ||||||||| | || | ||||||||||||||||||||||    
T  33405479 tacggacactggacacgacatggacactgacacactggccctgttaataatttgagaaaaacacataatttagtgtaattata 33405397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 40332157 - 40332195
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacac 184  Q
    |||||||||||||||||| || |||||||||||||||||    
T  40332157 atgaagcacggatacggacaccggacacgacacggacac 40332195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 4673525 - 4673440
Alignment:
Q  153 acggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||| |  ||||||||||| ||||| ||||| || |||| | ||||||||| |||| |||| | |||| ||||||||||    
T  4673525 acggatacggacatcggacacgacacagacactgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaatta 4673440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 12570594 - 12570521
Alignment:
Q  167 tggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||||||| || |||||||||||    |||||||||||||||| | || | ||||||||| ||||||||||||    
T  12570594 tggacacgatacagacaccgacacgttgacactgctaataatttaagaaaaacacataattaagtgtaattata 12570521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 22652057 - 22652106
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||||||| | |||||| |||||| ||||||||| ||||||||||||    
T  22652057 gtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 28385088 - 28385007
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||||||| ||||||||||||||| ||||  || |||| | ||||||| | || | ||| ||||||| ||||||||||||    
T  28385088 acggatactgaacacgacacggacactgacataccgacaccgttaataatatgaataaatctcataattcagtgtaattata 28385007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 30068017 - 30067968
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||||||||| ||||| ||||||| || |||||| ||||||||||||    
T  30068017 gtgtccgacactgggacacacctaatccgatgagtgtccgtgcttcatag 30067968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 126455 - 126392
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattt 210  Q
    |||||||||||||||| | || |||||||| ||||| || ||||| ||||||| |||||||||||    
T  126455 atgaagcacggatacgcacac-ggacacgatacggatactgacacgccaacaccgctaataattt 126392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 13397622 - 13397670
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||| ||||||||||||||   |||||||| ||||||||||||    
T  13397622 tgtccgacaccgagacacgcctaattcaaggagtgtccgtgcttcatag 13397670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 36450833 - 36450769
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||| ||||| || ||||  |||||||||| |||| |||||| |||| ||||||||||    
T  36450833 gacacggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaatta 36450769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 241559 - 241639
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattat 239  Q
    ||||| || ||||||||||||||||| ||||| || |||| |||||||||||  ||| |||||||||||||||||||||||    
T  241559 acggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattat 241639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 247 - 299
Target Start/End: Original strand, 241674 - 241726
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagat 299  Q
    |||||||||||| | ||||||||||||| ||| ||||| ||||||||||||||    
T  241674 cgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagat 241726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 3e-16; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 24105631 - 24105722
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| || |||| ||||||||||| |||| ||  ||| ||| ||||||||||    
T  24105631 atgaagcacggatacggatac-ggacacgacacggacactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaatta 24105722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 27944993 - 27945085
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||||||||||| || ||||||||||||||||| ||||| || ||||  |||||||||| | || || |||||||| ||||||||||    
T  27944993 atgaagcacggatacggacaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaatta 27945085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 24339601 - 24339686
Alignment:
Q  153 acggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||| || |||||||||| |||||  ||||| || |||| ||||||||||| |||| ||||||||||| ||||||||||    
T  24339601 acggatacggacaccggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 24339686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 235
Target Start/End: Complemental strand, 43027576 - 43027487
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaa 235  Q
    ||||||||||||| |||| |||||||||||||||||||| |||||  | || | ||||||||||| |||| ||||||||||  |||||||    
T  43027576 atgaagcacggatgcggacactggacacgacacggacactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaa 43027487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 11061157 - 11061091
Alignment:
Q  172 acgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||||| ||||| || |||| ||||||||||| |||| ||||||||||||||| ||||||    
T  11061157 acgacacggacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataatta 11061091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 170 - 297
Target Start/End: Original strand, 30813788 - 30813916
Alignment:
Q  170 acacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgtt-cgtgtccgacactgaga-cacg 267  Q
    |||||| || ||||| || ||||| ||| |||||||||||| | || || |||||||| |||||||||| |  |||| ||||||||||| | ||| ||||    
T  30813788 acacgagacagacactgatactccgacattgctaataatttgagaaaattacataattcagtgtaattacaggtgttgcgtgtccgaca-tcagaacacg 30813886  T
Q  268 cctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||| ||||||||| ||||||||||||    
T  30813887 cctaatccgaggagtgtccgtgcttcatag 30813916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 234
Target Start/End: Original strand, 2034394 - 2034481
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgta 234  Q
    |||||||||||||||||||||| ||||||||||||| ||  ||||  | ||||  |||||||||| | ||||||| |||||||||||||    
T  2034394 atgaagcacggatacggatact-gacacgacacggatacttacacgtcgacaccactaataatttgagaatatcatataatttagtgta 2034481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 5409821 - 5409771
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| | ||||||||||||| ||||||||| ||||||||||||    
T  5409821 cgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 7328798 - 7328704
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||||||||||||||| || | ||||||||| ||||   ||||  | | |||||||||||||| | || || |||||||||||||||||||||    
T  7328798 atgaagcacggatacggacaccgaacacgacacagacattaacacgtcgatactgctaataatttgagaaaataacataatttagtgtaattata 7328704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 13770665 - 13770735
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||||||||| || || || |||| ||||||||||| |||| || |||||||| ||||||||||    
T  13770665 ggacacgacacggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaatta 13770735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 258
Target Start/End: Original strand, 25481876 - 25481966
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacac 258  Q
    |||||| ||| |||||  ||||| || |||| ||||||||||| |||| ||||||||||| |||||||||| || |||| ||||| |||||    
T  25481876 ggacacaacatggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcggacac 25481966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 17851396 - 17851477
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||| || |||||||||| ||| ||||||||  | | || ||||||||||||| || ||||||||||| ||||||||||||    
T  17851396 acggacaccggacacgacatggataccgacacatcgataccgctaataattttagaaaatcacataattcagtgtaattata 17851477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 290
Target Start/End: Complemental strand, 18215265 - 18215144
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt-----tcgtgtccgacactgagacacgc 268  Q
    |||||||||||  |||| || || | ||||||||||| |||| ||||||||||  |||||| ||| || |||     ||||||||||||| | |||||||    
T  18215265 gacacggacactaacacgccgacgcagctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtcgtgtccgacaccgggacacgc 18215166  T
Q  269 ctaatcggaggagtgttcgtgc 290  Q
    |||||| ||||||||| |||||    
T  18215165 ctaatctgaggagtgtccgtgc 18215144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 19206015 - 19206096
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||||||  ||||||||||||||||| |||| || |||| ||||||||||| | || ||||||||||| | | ||||||||    
T  19206015 acggataccagacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcacataattcattataattata 19206096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 4017882 - 4017806
Alignment:
Q  165 actggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataa 241  Q
    |||||||||||||||||||||||||| || |||| | ||||||||| | || |  | ||||||||||||||| ||||    
T  4017882 actggacacgacacggacaccgacacgccgacacggataataatttgagaaaacgatataatttagtgtaatcataa 4017806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 11722192 - 11722124
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatt 227  Q
    |||||||| ||||||||||||||||| ||||| || |||| ||||| ||||| | || |||||||||||    
T  11722192 acggataccggacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatcacataatt 11722124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 15680789 - 15680873
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacac 258  Q
    |||| |||||| ||||| || |||  ||||||||||  |||| ||||||||||||||||||||||||| |||  ||||| |||||    
T  15680789 gacatggacactgacacgccgacatagctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggtgtcggacac 15680873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 18013155 - 18013087
Alignment:
Q  172 acgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||||||||||| |||| ||  ||||| |||||||||| |||| || |||||||| ||||||||||||    
T  18013155 acgacacggacactgacattctgacactactaataatttaaaaaaattacataattcagtgtaattata 18013087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 33994164 - 33994256
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||||||||||| ||| ||||||||||| |||| ||||| || || |  ||| |||||| ||||  |||||||||| |||| |||||    
T  33994164 atgaagcacggatacggacacttgacacgacacgaacactgacacgccgacgcaactactaatttgaaaaggtcacataattcagtgcaatta 33994256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 5235949 - 5236032
Alignment:
Q  157 atacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||||| | |||||||||||| ||||| |||||  | |||| ||||||||||| | || || | |||||||||||||||||||    
T  5235949 atacggacattggacacgacacagacactgacacgtcgacaccgctaataatttaagaaaattatataatttagtgtaattata 5236032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 20549862 - 20549909
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcata 296  Q
    ||||||||| |||||||||||||||| ||||||||  |||||||||||    
T  20549862 tgtccgacaatgagacacgcctaatccgaggagtgcccgtgcttcata 20549909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 21864758 - 21864852
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattt--taaaatatcacataatttagtgtaatta 238  Q
    |||||||||||||||  | |  ||||||||||||||||| ||||| |  |||| |||||||||||   |||| |||| |||||||||||||||||    
T  21864758 atgaagcacggatacacacatcggacacgacacggacacggacacacggacacagctaataatttgaaaaaaaatcatataatttagtgtaatta 21864852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 262 - 297
Target Start/End: Complemental strand, 32093989 - 32093954
Alignment:
Q  262 gacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||||||||| ||||||||||||||||||||||    
T  32093989 gacacgcctaatccgaggagtgttcgtgcttcatag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 45056974 - 45056927
Alignment:
Q  180 gacaccgacactccaacactgctaataattttaaaatatcacataatt 227  Q
    ||||| ||||||||||||||||||||||||| | || |||||||||||    
T  45056974 gacacggacactccaacactgctaataatttgagaaaatcacataatt 45056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 598277 - 598327
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| | ||||||||||||| ||| ||||| ||||||||||||    
T  598277 cgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 3721070 - 3721139
Alignment:
Q  170 acacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||||||||||||| |||| | | ||| |||||||||||| | || ||||||||||||||| ||||||||    
T  3721070 acacgacacggacactgacatttcgaca-tgctaataatttgagaaaatcacataatttagtataattata 3721139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 7133262 - 7133212
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||||| ||||| ||||||| |||||| || ||||||||||||    
T  7133262 cgtgtccgacactgggacacacctaatctgaggagcgtccgtgcttcatag 7133212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 9778574 - 9778624
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| | |||||||||||||  |||||||| ||||||||||||    
T  9778574 cgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcatag 9778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 255 - 297
Target Start/End: Complemental strand, 11738193 - 11738151
Alignment:
Q  255 acactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||||||||||| ||||||||| |||| |||||||    
T  11738193 acactgagacacgcctaatcagaggagtgtccgtgtttcatag 11738151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 15680878 - 15680928
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| |||||||| |||||  ||||||||| ||||||||||||    
T  15680878 cgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcatag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 17852069 - 17852119
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| ||||||| ||||||  ||||||||| ||||||||||||    
T  17852069 cgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcatag 17852119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 202 - 297
Target Start/End: Original strand, 38143231 - 38143318
Alignment:
Q  202 taataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||||| |||| ||||||||||||| ||||||||||  |||| |||||        |||||| ||||||| |||||||||||||| |||||||    
T  38143231 taataatttgaaaaaatcacataatttaatgtaattatatgtgttggtgtc--------agacacacctaatccgaggagtgttcgtgtttcatag 38143318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 43027454 - 43027404
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| | ||||||||||||| || |||||| ||||||||||||    
T  43027454 cgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 6490786 - 6490835
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||||||| | ||||||| ||||| ||||||||| ||||||||||||    
T  6490786 gtgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcatag 6490835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 24105748 - 24105797
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||||||| | ||||||||||| | |||||||||| |||||||||||    
T  24105748 gtgtccgacaccgggacacgcctaacccgaggagtgtttgtgcttcatag 24105797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 26733279 - 26733348
Alignment:
Q  169 gacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||||||||| |||||  | |||| ||||||||||| | || ||||||||||| ||| ||||||    
T  26733279 gacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaatta 26733348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 27093471 - 27093426
Alignment:
Q  195 acactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||| ||||||||||| | || ||||||||||||||||||||||||    
T  27093471 acaccgctaataatttaagaaaatcacataatttagtgtaattata 27093426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 27184830 - 27184875
Alignment:
Q  195 acactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||| ||||||||||| | || ||||||||||||||||||||||||    
T  27184830 acaccgctaataatttaagaaaatcacataatttagtgtaattata 27184875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 438
Target Start/End: Complemental strand, 29865218 - 29865165
Alignment:
Q  385 agtatcaaaagtaagtattttagtttattgtatccacatggactcatgcgatat 438  Q
    ||||||||||||||||||||| || ||| || ||||||||||||  ||||||||    
T  29865218 agtatcaaaagtaagtatttttgtgtatcgtctccacatggactagtgcgatat 29865165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 2334331 - 2334379
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||||||||| ||||| |||||| ||||||||| |||| |||||||    
T  2334331 tgtccgacactgaaacacgtctaatccgaggagtgtccgtgtttcatag 2334379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 7328674 - 7328638
Alignment:
Q  262 gacacgcctaatcggaggagtgttcgtgcttcataga 298  Q
    ||||||||||||| || ||||||||||||||||||||    
T  7328674 gacacgcctaatccgatgagtgttcgtgcttcataga 7328638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 9408385 - 9408349
Alignment:
Q  202 taataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  9408385 taataatttgaaaaaatcacataatttagtgtaatta 9408349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 15902796 - 15902868
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||||||||| ||||| ||||  || ||||   ||||||||| | || ||||||||||||||||||||||||    
T  15902796 ggacacgacacagacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattata 15902868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 19213804 - 19213844
Alignment:
Q  195 acactgctaataattttaaaatatcacataatttagtgtaa 235  Q
    ||||||||||||||||||||| ||||||||||  |||||||    
T  19213804 acactgctaataattttaaaaaatcacataatgcagtgtaa 19213844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 24339726 - 24339774
Alignment:
Q  251 tccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagat 299  Q
    |||||||| | ||||||||||||| ||||||||  ||||||||||||||    
T  24339726 tccgacaccgggacacgcctaatccgaggagtgcccgtgcttcatagat 24339774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 150 - 245
Target Start/End: Complemental strand, 32094124 - 32094028
Alignment:
Q  150 agcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaata-tcacataatttagtgtaattataaatgt 245  Q
    |||||||||||||| ||  ||||||||||  ||||  |||  |||||||  |||||||||| |||| | |||||||||| |||||||||| ||||||    
T  32094124 agcacggatacggacacaagacacgacacaaacactaacatgccaacacaactaataatttgaaaaaaatcacataattcagtgtaattacaaatgt 32094028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 32287452 - 32287404
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcata 296  Q
    ||||||||||| | ||||| ||||||| ||||||||| |||||||||||    
T  32287452 gtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 33994283 - 33994331
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||| |||| |||||||||||||||  ||||||||||||| |||||||    
T  33994283 tgtccaacaccgagacacgcctaatccaaggagtgttcgtgtttcatag 33994331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 22440684 - 22440559
Alignment:
Q  169 gacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacactgagacacgc 268  Q
    ||||||||| |||||| || ||  | |||| | ||||||||| | || ||||||||||| ||||||||||||  ||  |||||||||||||  |||||||    
T  22440684 gacacgacatggacactgatacatcgacaccgttaataatttgagaaaatcacataattcagtgtaattatatgtga-cgtgtccgacactaggacacgc 22440586  T
Q  269 ctaatcggaggagtgttcgtgcttcat 295  Q
    |||||| ||||||||| ||||||||||    
T  22440585 ctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 29205539 - 29205589
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagat 299  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  29205539 tgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatagat 29205589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 34306794 - 34306743
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcataga 298  Q
    |||||||||||| ||||||||||||||| ||||| |||||||||||||||||    
T  34306794 cgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcataga 34306743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 36635298 - 36635381
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgt 251  Q
    ||||||||| ||||||| ||||| |||||||  |||||||||| | || ||||||||||| ||||||||||||  |||||||||    
T  36635298 ggacacgactcggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaattatatgtgttcgtgt 36635381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 299
Target Start/End: Original strand, 37203265 - 37203373
Alignment:
Q  195 acactgctaataattttaaaatatcacataatttagtgtaattataaatgt----tcgtgtccgacactgagacacgcctaatcggaggagtgttcgtgc 290  Q
    |||| ||||||||||| |||| || ||||||||||||||||||| || |||    ||| ||||||||| | |||||| |||||| ||| ||||| |||||    
T  37203265 acacggctaataatttgaaaaaatgacataatttagtgtaattacaagtgtagtgtcgggtccgacaccgggacacgtctaatccgagaagtgtccgtgc 37203364  T
Q  291 ttcatagat 299  Q
    |||||||||    
T  37203365 ttcatagat 37203373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 19482748 - 19482798
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  19482748 cgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatag 19482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 15029766 - 15029811
Alignment:
Q  195 acactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||    
T  15029766 acactgctaataatttgaaaatatcacataattcagtgtaattata 15029811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 23293086 - 23293001
Alignment:
Q  153 acggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| ||||| || ||||||||||||||||  ||||| || |||| ||||||||||| |||| ||||||||||| ||| ||||||    
T  23293086 acggacacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataatta 23293001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 35158085 - 35157980
Alignment:
Q  153 acggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtc 252  Q
    ||||| ||||| || |||||| |||||||||| ||||| || || |  ||||||||||  ||| ||||||||||||||||||||||||| |||  |||||    
T  35158085 acggacacggacaccggacacaacacggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtc 35157986  T
Q  253 cgacac 258  Q
     |||||    
T  35157985 tgacac 35157980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 3064916 - 3064868
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||| ||||||||||||||||| ||||||||| ||||||||||||    
T  3064916 tgtccgactctgagacacgcctaatccgaggagtgtccgtgcttcatag 3064868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 16184902 - 16184950
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| ||||||||||||| |||||||||| |||||||||||    
T  16184902 tgtccgacactgggacacgcctaatccgaggagtgtttgtgcttcatag 16184950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 31800585 - 31800493
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| ||||||||  || | |||||| |||||| |||||||||| || |||| |||||||||||||||| || | |||||||| ||||||||    
T  31800585 atgaaacacggatatagacattggacatgacacgaacaccgacacaccgacacagctaataattttaaaaaattaaataatttaatgtaatta 31800493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 169 - 252
Target Start/End: Original strand, 19482643 - 19482726
Alignment:
Q  169 gacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtc 252  Q
    |||||||||| ||||| ||||| || ||||  |||||||||| ||||||||||||||||  ||||||||| || |||| |||||    
T  19482643 gacacgacacagacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgttggtgtc 19482726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 294
Target Start/End: Original strand, 28084593 - 28084640
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttca 294  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||||||    
T  28084593 cgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 715593 - 715543
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagat 299  Q
    |||||||||| | ||||||||||||| ||||||||| ||||||||||||||    
T  715593 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 715543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 752919 - 752869
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagat 299  Q
    |||||||||| | ||||||||||||| ||||||||| ||||||||||||||    
T  752919 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 752869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 299
Target Start/End: Complemental strand, 10499306 - 10499225
Alignment:
Q  217 atcacataatttagtgtaattataaatgttcgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagat 299  Q
    ||||||||||||||||||||||||  |||  ||||| ||| | || |||||||||||| ||||| ||| ||||||||||||||    
T  10499306 atcacataatttagtgtaattatatgtgtcagtgtcggaccc-gacacacgcctaatccgaggattgtccgtgcttcatagat 10499225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 23292976 - 23292926
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||| | ||||||||||||| ||||||||| ||||||||||||    
T  23292976 cgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 12895374 - 12895269
Alignment:
Q  153 acggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtc 252  Q
    ||||||||||| || ||| |||||||| |||  ||||| || ||||   ||||||||| |||| |||||||||||| |||||||||||| |||  |||||    
T  12895374 acggatacggacaccggatacgacacgaacaatgacacgccgacacaaataataatttgaaaaaatcacataattttgtgtaattataagtgtcggtgtc 12895275  T
Q  253 cgacac 258  Q
     |||||    
T  12895274 ggacac 12895269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 24343472 - 24343553
Alignment:
Q  159 acggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||| || ||||||||||||||| ||||||| || |||| | ||||||||| | || || |||||||| ||||||||||||    
T  24343472 acggacaccggacacgacacggacgccgacacgccgacacggataataatttgagaaaattacataattcagtgtaattata 24343553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 232
Target Start/End: Complemental strand, 11651239 - 11651155
Alignment:
Q  148 gaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtg 232  Q
    |||||||||||||||| |   ||||||| |||||||| |||||  | |||| ||||||||||| |||| ||||||||||| ||||    
T  11651239 gaagcacggatacggacataagacacgatacggacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtg 11651155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 16073465 - 16073513
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||||||| |||||||||||||| ||||||||| | ||||||||||    
T  16073465 tgtccgacactaagacacgcctaatccgaggagtgtccatgcttcatag 16073513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 247 - 299
Target Start/End: Original strand, 24343582 - 24343634
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagat 299  Q
    |||||||||||| | |||||||||| || ||||||||| ||||||||||||||    
T  24343582 cgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcatagat 24343634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 8423776 - 8423713
Alignment:
Q  195 acactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacac 258  Q
    |||| ||||||||||| | || ||||||||||| |||||||||||||||||  ||||| |||||    
T  8423776 acaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtcggacac 8423713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 262 - 297
Target Start/End: Complemental strand, 12895249 - 12895214
Alignment:
Q  262 gacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||||||||| ||||||||||||||||||||||    
T  12895249 gacacgcctaatccgaggagtgttcgtgcttcatag 12895214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 2361966 - 2361912
Alignment:
Q  246 tcgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagatg 300  Q
    ||||||| ||||| ||||||| ||||||| || |||||| |||||||||||||||    
T  2361966 tcgtgtctgacaccgagacacacctaatctgacgagtgtccgtgcttcatagatg 2361912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 14126197 - 14126123
Alignment:
Q  167 tggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataa 241  Q
    |||||||||||| |||||  |||| || |||||| ||||||||| | ||  |||||||||| |||||||||||||    
T  14126197 tggacacgacacagacactaacacgccgacactgttaataatttgataaagtcacataattcagtgtaattataa 14126123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 28964234 - 28964188
Alignment:
Q  251 tccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||| ||||||||||||| ||||||||| | ||||||||||    
T  28964234 tccgacactgggacacgcctaatccgaggagtgtccatgcttcatag 28964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 29205442 - 29205488
Alignment:
Q  192 ccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||| ||||||||||| |||| ||||||||||| ||||||||||    
T  29205442 ccaacacggctaataatttgaaaaaatcacataattcagtgtaatta 29205488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 13134451 - 13134496
Alignment:
Q  195 acactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    |||||||| ||||||| | || ||||||||||||||||||||||||    
T  13134451 acactgcttataatttaagaaaatcacataatttagtgtaattata 13134496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 296
Target Start/End: Complemental strand, 14465055 - 14465006
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcata 296  Q
    ||||| |||||||| |||||| |||||| ||||||||| |||||||||||    
T  14465055 cgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcata 14465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 18513224 - 18513175
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||   ||||||||||||| ||||||||| ||||||||||||    
T  18513224 gtgtccgacaccaggacacgcctaatctgaggagtgtccgtgcttcatag 18513175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 20633541 - 20633590
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||| |||||  ||||||||||||||  |||||||||||||||||||||    
T  20633541 gtgtcggacaccaagacacgcctaatccaaggagtgttcgtgcttcatag 20633590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 27706261 - 27706192
Alignment:
Q  169 gacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||| |||||| |||||  | ||||   ||||||||| |||| ||||||||||||||||||||||    
T  27706261 gacacgacagggacactgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaatta 27706192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 296
Target Start/End: Complemental strand, 44081557 - 44081508
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcata 296  Q
    ||||| ||||||||||||| | |||||| || ||||||||||||||||||    
T  44081557 cgtgttcgacactgagacatgtctaatctgaagagtgttcgtgcttcata 44081508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 54580075 - 54580018
Alignment:
Q  201 ctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacac 258  Q
    |||||||||| |||| ||||||||||| ||||||||||||| |||  ||||| |||||    
T  54580075 ctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcggacac 54580018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 2362042 - 2361990
Alignment:
Q  186 gacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| || |||| ||||||||||| |||| || |||||||||||||||||||    
T  2362042 gacacaccgacacagctaataatttgaaaaaattacataatttagtgtaatta 2361990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 3947872 - 3947781
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||| | |||||||| || |||||| |||| ||||| ||||  || |||| ||||||||||| |||| ||| ||||||| ||||||||||    
T  3947872 atgaagctcagatacggacac-ggacaccacacagacacggacatgccgacacagctaataatttgaaaaaatcgcataattcagtgtaatta 3947781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 5414257 - 5414185
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattata 240  Q
    ||||||||||||||||| ||||| || |||| ||||||  ||||| || |||||| |||  ||||||||||||    
T  5414257 ggacacgacacggacacggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattata 5414185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 6485662 - 6485626
Alignment:
Q  202 taataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaatta 6485626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 8423706 - 8423658
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||| | ||||||||||||||||| ||||| ||||| ||||||    
T  8423706 tgtccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcatag 8423658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 11596345 - 11596297
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||  | ||||||||||||| ||||||||| ||||||||||||    
T  11596345 tgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11596297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 14465154 - 14465090
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| ||||| ||||||| |||||  |||||||||| |||| ||||||||||| | ||||||||    
T  14465154 gacacagacactgacactctaacacacctaataatttgaaaaaatcacataattcaatgtaatta 14465090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 40965341 - 40965389
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcata 296  Q
    |||||||||||  |||||||||||||| |||||||||  ||||||||||    
T  40965341 gtgtccgacaccaagacacgcctaatctgaggagtgtcggtgcttcata 40965389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 8757 - 8842
Alignment:
Q  153 acggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| ||||| || ||||||||||||||||| ||||| || |||| ||||||||||| |||| |||| || ||||||||||||||    
T  8757 acggacacggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaatta 8842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 247 - 299
Target Start/End: Original strand, 8867 - 8919
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagat 299  Q
    |||||||||||| ||||||||||||||| ||||||| | ||||||||||||||    
T  8867 cgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcatagat 8919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 297
Target Start/End: Original strand, 46656 - 46776
Alignment:
Q  168 ggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgttcgtgtccgacactgagacacg 267  Q
    ||||||||||||||||  ||||| || |||| | ||||||||| |||| ||||||||||| |||||||||| ||||||  |||||         ||||||    
T  46656 ggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtgtc---------gacacg 46746  T
Q  268 cctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||| ||||||||| ||||||||||||    
T  46747 cctaatccgaggagtgtccgtgcttcatag 46776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 157 - 245
Target Start/End: Original strand, 90806 - 90894
Alignment:
Q  157 atacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataaatgt 245  Q
    |||||||||||||||||||||| ||||| ||||| |||||||   ||||||||| | || |||| |||||| |||||||||||| ||||    
T  90806 atacggatactggacacgacacagacactgacacaccaacaccattaataatttgagaaaatcatataattcagtgtaattatatatgt 90894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 263472 - 263384
Alignment:
Q  153 acggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataa 241  Q
    ||||| ||||| |||||| ||||||||||||| ||||   |||||||||||||||||| | || | ||||||||| |||||||||||||    
T  263472 acggacacggacactggatacgacacggacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattataa 263384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 14596 - 14647
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcataga 298  Q
    |||||||||||| |||||||||||||||| |||||||| |||||||||||||    
T  14596 cgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcataga 14647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 23373 - 23467
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaattataa 241  Q
    |||||||||||||||||| || ||||||||||| ||||| ||||| || |||| | |||||| |  |||| ||||||||||| |||||||||||||    
T  23373 atgaagcacggatacggacac-ggacacgacacagacactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaattataa 23467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 13352 - 13444
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||||||||||| || ||| | ||||||||||| ||||| || ||||  |||||||||| | || ||||||||||| |||| |||||    
T  13352 atgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaatta 13444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 21975 - 21883
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||||||||||| || ||| | ||||||||||| ||||| || ||||  |||||||||| | || ||||||||||| |||| |||||    
T  21975 atgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaatta 21883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 51791 - 51855
Alignment:
Q  174 gacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||||||||| ||||| || |||| ||||||||||| |||| ||||||||||| ||||||||||    
T  51791 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 51855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 238
Target Start/End: Complemental strand, 178925 - 178833
Alignment:
Q  147 tgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatca-cataatttagtgtaatta 238  Q
    |||||||||||||  || || ||||||||||||||||| ||||| || ||||  |||||||||| |||| |||| ||||||| ||||||||||    
T  178925 tgaagcacggatattgacaccggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaatta 178833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 4869 - 4819
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagat 299  Q
    |||||||||| | ||||||||||||| ||||||||| ||||||||||||||    
T  4869 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagat 4819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 562 - 477
Alignment:
Q  153 acggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| ||||| || | ||||| ||||||||| || || || |||||||||||||||| |||| |||||| |||| ||||||||||    
T  562 acggacacggacaccgaacacgccacggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaatta 477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 296
Target Start/End: Complemental strand, 452 - 403
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcata 296  Q
    |||||||||||| | ||||| ||||||| ||||||||| |||||||||||    
T  452 cgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 8614 - 8562
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatagat 299  Q
    ||||||||||||||  |||||||||||  ||||||||| ||||||||||||||    
T  8614 cgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcatagat 8562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 17977 - 17913
Alignment:
Q  146 atgaagcacggatacggatactggacacgacacggacaccgacactccaacactgctaataattt 210  Q
    |||||||||||||||||| ||||||||||| ||  ||||| |||| || |||| |||||||||||    
T  17977 atgaagcacggatacggacactggacacgatacaaacaccaacacgcctacaccgctaataattt 17913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 297
Target Start/End: Original strand, 3384 - 3427
Alignment:
Q  254 gacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||||    
T  3384 gacactgggacacgcctaatccgaggagtgtccgtgcttcatag 3427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 5026 - 4976
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||||||| ||||||| |||||||| |||||||||  |||||||||||    
T  5026 cgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcatag 4976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 8670 - 8720
Alignment:
Q  247 cgtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||||||| || ||||||||||  |||||||| ||||||||||||    
T  8670 cgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 8720  T

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Target: scaffold0227 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 7363 - 7318
Alignment:
Q  201 ctaataattttaaaatatcacataatttagtgtaattataaatgtt 246  Q
    ||||||||||  ||| ||||||||||||||||||||||||| ||||    
T  7363 ctaataatttggaaaaatcacataatttagtgtaattataagtgtt 7318  T

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Target: scaffold0057 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 24107 - 24155
Alignment:
Q  248 gtgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||||||||| ||||||||||||| || |||||| ||||||||||||    
T  24107 gtgtccgacactg-gacacgcctaatccgatgagtgtccgtgcttcatag 24155  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 130441 - 130526
Alignment:
Q  153 acggatacggatactggacacgacacggacaccgacactccaacactgctaataattttaaaatatcacataatttagtgtaatta 238  Q
    ||||| ||||| || ||||||||||||||||  ||||  || |||| | ||||| ||| |||| ||||||||||| ||||||||||    
T  130441 acggacacggacaccggacacgacacggacaatgacaagccgacacagttaatagtttgaaaaaatcacataattcagtgtaatta 130526  T

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Target: scaffold0021; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 3026 - 2978
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    ||||||||||||| |||||||||||  | ||||||| ||||||||||||    
T  3026 tgtccgacactgaaacacgcctaatatggggagtgtccgtgcttcatag 2978  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 17801 - 17764
Alignment:
Q  201 ctaataattttaaaatatcacataatttagtgtaatta 238  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  17801 ctaataatttgaaaaaatcacataatttagtgtaatta 17764  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 3826 - 3778
Alignment:
Q  249 tgtccgacactgagacacgcctaatcggaggagtgttcgtgcttcatag 297  Q
    |||||||||  ||||||||||||||| ||||||||| | ||||||||||    
T  3826 tgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcatag 3778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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