View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19494_high_34 (Length: 230)
Name: NF19494_high_34
Description: NF19494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19494_high_34 |
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Alignment Details
Target: chr2 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 22 - 215
Target Start/End: Complemental strand, 7156923 - 7156730
Alignment:
| Q |
22 |
caccttcatgtgtcaaccacgcgcccacgtctcctcgtctcaagtttcacccatttctcactcgaggtcgaccacatgtcttaccnnnnnnnnnnnnnnn |
121 |
Q |
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| T |
7156923 |
caccttcatgtgtcaaccacgcgcccacgtctcctcgtctcaagtttcacccatttctcactcgaggtcgaccacatgtcttaccctctctcctctctct |
7156824 |
T |
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| Q |
122 |
tcacaaaagtaacctccatccccaccgccttgcacctagattaccctctcaatgataaaactatcctagatgcttcttgacatggcattctctg |
215 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |
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| T |
7156823 |
tcacaaaagtaacctccatccccactgccttgcacctagattaccctctcaatgataaaactatcctagttgcttcttgccatggcattctctg |
7156730 |
T |
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