View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19494_low_20 (Length: 311)
Name: NF19494_low_20
Description: NF19494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19494_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 12 - 297
Target Start/End: Original strand, 7292975 - 7293260
Alignment:
| Q |
12 |
atgaatcaaacaagggcatctgatgagttaatttttgtgagccaaatttttaaccagatgcattgatttttcaaccaccgctttaatttgtttatatttt |
111 |
Q |
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| T |
7292975 |
atgaatcaaacaagggcacctgatgagttaatttttgtgagccaaatttttaaccagatgcattgatttttcaaccaccgctttaatttgtttatatttt |
7293074 |
T |
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| Q |
112 |
atttcggaagaagtattttataagattctacgtatatttgtgtgtacaatcaaatggaaaatgacaatatgaaaattatgcataagccaaaaacaactta |
211 |
Q |
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| T |
7293075 |
atttcagaagaagtattttataagattctacgtatatttgtgtgtacaatcaaatggaaaatgacaatatgaaaattatgcataagcgaaaaacaactta |
7293174 |
T |
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| Q |
212 |
ggacaataatttatatctagaagtgttgataaaaaacgattgaggggaaactctacaaactctatcgaacattttccggacatatt |
297 |
Q |
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| T |
7293175 |
ggacaataatttatatctagaagtgttgataaaaaacgattgaggggaaactctacaaactctatcgaacattttcaggacatatt |
7293260 |
T |
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