View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19495_high_17 (Length: 335)
Name: NF19495_high_17
Description: NF19495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19495_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 319
Target Start/End: Complemental strand, 38376125 - 38375807
Alignment:
| Q |
1 |
aaaatatatatgttgtctgatataatacataaactaaaatttattcaataatttagttatgtagaatnnnnnnnn-ttaccattcatgacatttaattaa |
99 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
38376125 |
aaaaaatatatgttgtctgatataatacataaactaaaatttattcaataatttagttatgtagaataaaaaaaaattaccattcatgacatttaattaa |
38376026 |
T |
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| Q |
100 |
atggaaaccattttgtaattatcattatttttatcaagtaaaataacattattaaatataataaattaagnnnnnnnntatttacattttggaccaaaat |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
38376025 |
atggaaaccattttgtaattatcattatttttatcaagtaaaataacattattaaatataataaattaagaaaaaaaatatttacattttggaccaaaat |
38375926 |
T |
|
| Q |
200 |
tatgattatattttttgattgagaatggagaaagtatggtattgatttacacaagtaaacatgttgaagaaggggtgcagaaaagaaaatctacccatgc |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38375925 |
tatgattatattttttgattgagaatggagaaagtatg-tattgatttacacaagtaaacatgttgaagaaggggtgcagaaaagaaaatctacccatgc |
38375827 |
T |
|
| Q |
300 |
tcggtaggtctgtccctact |
319 |
Q |
| |
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|||||||||||||||||||| |
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| T |
38375826 |
tcggtaggtctgtccctact |
38375807 |
T |
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