View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19495_high_19 (Length: 315)
Name: NF19495_high_19
Description: NF19495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19495_high_19 |
 |  |
|
| [»] chr4 (9 HSPs) |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 125; Significance: 2e-64; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 472901 - 473092
Alignment:
| Q |
1 |
tgcaatttaggcagctggtggtgggtgagtgatttatgaaggagagacaaatgattgtgagttgaagacaaagttgggaaagatatagtgtgtccagatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
472901 |
tgcaatttaggcagctggtggtgggtgagtgagttatgaaggagagagaaatggctgttagttgaagacaaagttggaaaagatatagtgtgtgcagatt |
473000 |
T |
 |
| Q |
101 |
ataacaagatcagtggtcctgtttaatctgatggctaaaaaata-ttttctcatggtggaaaacaactcccctttcccatattaaatgtcacc |
192 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||||||| |||||| ||||||| |||| ||| ||||||||||||||||||| |||| |
|
|
| T |
473001 |
ataataagatcagtggtcctctttaatctgatggctaaaaaatacttttct-atggtgggaaacgacttccctttcccatattaaatgccacc |
473092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 6912162 - 6912112
Alignment:
| Q |
146 |
tttctcatggtggaaaacaactcccctttcccatattaaatgtcacctata |
196 |
Q |
| |
|
|||| |||||||||||||||||| || ||||||| |||||| ||||||||| |
|
|
| T |
6912162 |
tttcccatggtggaaaacaactctccattcccatgttaaatctcacctata |
6912112 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 9142093 - 9142044
Alignment:
| Q |
146 |
tttctcatggtggaaaacaactcccctttcccatattaaatgtcacctat |
195 |
Q |
| |
|
|||| |||||||| |||||||| |||||||||||| |||||| ||||||| |
|
|
| T |
9142093 |
tttcccatggtgggaaacaacttccctttcccatactaaatgccacctat |
9142044 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 199 - 315
Target Start/End: Complemental strand, 41736103 - 41735987
Alignment:
| Q |
199 |
tatttggtatttacactttattaaactcaaactttttgacagcaaaacttctataaaaccacaatattttatgtttatgtttaatttaggccaaatatca |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
41736103 |
tatttggtatttacactttattaaactcaaactttttgacagcaaaacttctataaaaccacaatattttatgtttatgtttaatttaggccaaatacca |
41736004 |
T |
 |
| Q |
299 |
tttttgatcattttagt |
315 |
Q |
| |
|
|||||||| ||||||| |
|
|
| T |
41736003 |
cttttgatccttttagt |
41735987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 30809507 - 30809555
Alignment:
| Q |
146 |
tttctcatggtggaaaacaactcccctttcccatattaaatgtcaccta |
194 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
30809507 |
tttctcatggtggaaaacaactcccctttcccattttaaatgccaccta |
30809555 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 25970805 - 25970855
Alignment:
| Q |
146 |
tttctcatggtggaaaacaactcccctttcccatattaaatgtcacctata |
196 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||| |||||| |||||||| |
|
|
| T |
25970805 |
tttctcatggtgggaaacaactcccttttcccatactaaatgccacctata |
25970855 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 47377579 - 47377647
Alignment:
| Q |
125 |
aatctgatggctaaaaaatattttctcatggtggaaaacaactcccctttcccatattaaatgtcacct |
193 |
Q |
| |
|
||||| |||||| |||| | |||| |||||||| ||||||||||||||||||| |||||||| ||||| |
|
|
| T |
47377579 |
aatctaatggctgaaaataactttcccatggtgggaaacaactcccctttcccaaattaaatggcacct |
47377647 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 25371538 - 25371593
Alignment:
| Q |
137 |
aaaaaatattttctcatggtggaaaacaactcccctttcccatattaaatgtcacc |
192 |
Q |
| |
|
|||||||| ||||||||||||| ||| || || ||||||||| ||||||||||||| |
|
|
| T |
25371538 |
aaaaaatactttctcatggtgggaaagaagtctcctttcccaaattaaatgtcacc |
25371593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 45331455 - 45331501
Alignment:
| Q |
146 |
tttctcatggtggaaaacaactcccctttcccatattaaatgtcacc |
192 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||| ||||||| |||| |
|
|
| T |
45331455 |
tttctcatggtgggaaacaactcccctttctcattttaaatgccacc |
45331501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 10421583 - 10421628
Alignment:
| Q |
146 |
tttctcatggtggaaaacaactcccctttcccatattaaatgtcac |
191 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||| |||||| ||||| |
|
|
| T |
10421583 |
tttcccatggtggaaaacaacttccctttcccaaattaaacgtcac |
10421628 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 179
Target Start/End: Complemental strand, 36450774 - 36450741
Alignment:
| Q |
146 |
tttctcatggtggaaaacaactcccctttcccat |
179 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |
|
|
| T |
36450774 |
tttcccatggtggaaaacaactcccctttcccat |
36450741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 23424546 - 23424486
Alignment:
| Q |
117 |
tcctgtttaatctgatggctaaaaaatattttctcatggtggaaaacaactcccctttccc |
177 |
Q |
| |
|
|||| |||||||| |||| | ||||| | ||||||||||||||||||||||| || ||||| |
|
|
| T |
23424546 |
tcctctttaatctaatggttgaaaaaaactttctcatggtggaaaacaactctccattccc |
23424486 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 84; Significance: 6e-40; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 44541565 - 44541743
Alignment:
| Q |
1 |
tgcaatttaggcagctggtggtgggtgagtgatttatgaaggagagacaaatgattgtgag-ttgaagacaaagttgggaaagatatagtgtgtccagat |
99 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||| |||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| || | |
|
|
| T |
44541565 |
tgcaatttaggcagcttgtggtaggtgagtgagttat-aaggagagagaaatgattgtgaggttgaagacaaagttgggaaagatatagtgtgtgcatac |
44541663 |
T |
 |
| Q |
100 |
tataacaagatcagtggtcctgtttaatctgatggctaaaaaatattttctcatggtggaaaacaactcccctttcccat |
179 |
Q |
| |
|
||||| ||||| ||| | || |||||||||||||| |||||||| |||| |||||| | |||||| ||| ||||||||| |
|
|
| T |
44541664 |
tataataagattggtgattctctttaatctgatggccaaaaaatactttcccatggtcggaaacaattccactttcccat |
44541743 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 24995921 - 24995865
Alignment:
| Q |
123 |
ttaatctgatggctaaaaaatattttctcatggtggaaaacaactcccctttcccat |
179 |
Q |
| |
|
||||||| |||| |||||||| |||| |||||||| |||||||||||||||||||| |
|
|
| T |
24995921 |
ttaatctaatggtcaaaaaatactttcccatggtgggaaacaactcccctttcccat |
24995865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 24996662 - 24996718
Alignment:
| Q |
123 |
ttaatctgatggctaaaaaatattttctcatggtggaaaacaactcccctttcccat |
179 |
Q |
| |
|
||||||| |||| |||||||| |||| |||||||| |||||||||||||||||||| |
|
|
| T |
24996662 |
ttaatctaatggtcaaaaaatactttcccatggtgggaaacaactcccctttcccat |
24996718 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 185
Target Start/End: Complemental strand, 46757470 - 46757431
Alignment:
| Q |
146 |
tttctcatggtggaaaacaactcccctttcccatattaaa |
185 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
46757470 |
tttctcatggtggaaaacaactcctctttcccatactaaa |
46757431 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 27599257 - 27599211
Alignment:
| Q |
146 |
tttctcatggtggaaaacaactcccctttcccatattaaatgtcacc |
192 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||| ||||||| |||| |
|
|
| T |
27599257 |
tttcccatggtgggaaacaactcccctttcccattttaaatgccacc |
27599211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 27600097 - 27600143
Alignment:
| Q |
146 |
tttctcatggtggaaaacaactcccctttcccatattaaatgtcacc |
192 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||| ||||||| |||| |
|
|
| T |
27600097 |
tttcccatggtgggaaacaactcccctttcccattttaaatgccacc |
27600143 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 193
Target Start/End: Complemental strand, 23462536 - 23462404
Alignment:
| Q |
61 |
gttgaagacaaagttgggaaagatatagtgtgtccagattataacaagatcagtggtcctgtttaatctgatggctaaaaaatattttctcatggtggaa |
160 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |||| ||||| |||||||||| |||| |||| || |||||| |||||||| |||| |||||| ||| |
|
|
| T |
23462536 |
gttgaagacaaagttgagaaagatatagtgtgtgcagactataataagatcagtgatcctctttagtcagatggccaaaaaatactttcccatggtagaa |
23462437 |
T |
 |
| Q |
161 |
aacaactcccctttcccatattaaatgtcacct |
193 |
Q |
| |
|
||||| | ||| || |||| |||||||||||| |
|
|
| T |
23462436 |
aacaagttcccatttccatgctaaatgtcacct |
23462404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 2307068 - 2307108
Alignment:
| Q |
139 |
aaaatattttctcatggtggaaaacaactcccctttcccat |
179 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||||| |
|
|
| T |
2307068 |
aaaatactttctcatggtggaaaacaacttccctttcccat |
2307108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 185
Target Start/End: Original strand, 36391674 - 36391713
Alignment:
| Q |
146 |
tttctcatggtggaaaacaactcccctttcccatattaaa |
185 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |||| |
|
|
| T |
36391674 |
tttcccatggtggaaaacaactcccctttcccatactaaa |
36391713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 185
Target Start/End: Original strand, 41985894 - 41985933
Alignment:
| Q |
146 |
tttctcatggtggaaaacaactcccctttcccatattaaa |
185 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
41985894 |
tttctcatggtggaaaacaacttccctttcccaaattaaa |
41985933 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 45139747 - 45139690
Alignment:
| Q |
137 |
aaaaaatattttctcatggtggaaaacaactcccctttcccatattaaatgtcaccta |
194 |
Q |
| |
|
||||||||||||| |||| ||||||| || || ||||||||| |||||||| |||||| |
|
|
| T |
45139747 |
aaaaaatattttcccatgatggaaaagaagtctcctttcccaaattaaatgccaccta |
45139690 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 36272464 - 36272595
Alignment:
| Q |
61 |
gttgaagacaaagttgggaaagatatagtgtgtccagattataacaagatcagtggtcctgtttaatctgatggctaaaaaatattttctcatggtggaa |
160 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |||| ||||| ||||||||| |||| ||||||| |||||| |||||||| |||| |||||||| | |
|
|
| T |
36272464 |
gttgaagacaaagttgagaaagatatagtgtgtgcagactataataagatcagtaatcctctttaatcagatggccaaaaaatactttcccatggtggga |
36272563 |
T |
 |
| Q |
161 |
aacaactcccctttcccatattaaatgtcacc |
192 |
Q |
| |
|
||||| | ||| ||||||| |||||| |||| |
|
|
| T |
36272564 |
aacaagttcccattcccatgctaaatgccacc |
36272595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 6768035 - 6768166
Alignment:
| Q |
61 |
gttgaagacaaagttgggaaagatatagtgtgtccagattataacaagatcagtggtcctgtttaatctgatggctaaaaaatattttctcatggtggaa |
160 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||| |||| ||||| ||||| ||| |||| ||||||| |||||| |||||||| |||| |||||||| | |
|
|
| T |
6768035 |
gttgaagacaaagttgagaaagatataatgtgtgcagactataataagattagtaatcctctttaatcagatggccaaaaaatactttcccatggtggga |
6768134 |
T |
 |
| Q |
161 |
aacaactcccctttcccatattaaatgtcacc |
192 |
Q |
| |
|
|| || | ||| ||||||| |||||| |||| |
|
|
| T |
6768135 |
aataagttcccattcccatgctaaatgccacc |
6768166 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 11469772 - 11469813
Alignment:
| Q |
151 |
catggtggaaaacaactcccctttcccatattaaatgtcacc |
192 |
Q |
| |
|
||||||| ||||||||| |||||||||| ||||||||||||| |
|
|
| T |
11469772 |
catggtgaaaaacaacttccctttcccaaattaaatgtcacc |
11469813 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 179
Target Start/End: Original strand, 8383935 - 8384053
Alignment:
| Q |
61 |
gttgaagacaaagttgggaaagatatagtgtgtccagattataacaagatcagtggtcctgtttaatctgatggctaaaaaatattttctcatggtggaa |
160 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||| |||| ||||||| | |||| || ||||| | | |||||||||||| |||||||| | |
|
|
| T |
8383935 |
gttgaagacaaagttgggaaatatatagtgtgtgcagaccataataagatcaacgatcctcttaaatctaaccgtcaaaaaatatttttccatggtggga |
8384034 |
T |
 |
| Q |
161 |
aacaactcccctttcccat |
179 |
Q |
| |
|
||||||||| ||||||||| |
|
|
| T |
8384035 |
aacaactccactttcccat |
8384053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 164
Target Start/End: Original strand, 23593857 - 23593960
Alignment:
| Q |
61 |
gttgaagacaaagttgggaaagatatagtgtgtccagattataacaagatcagtggtcctgtttaatctgatggctaaaaaatattttctcatggtggaa |
160 |
Q |
| |
|
||||||||||||||||||||||||||||||| | || | ||||| || ||||||| |||| |||| ||| | || |||||||| |||| |||||||| | |
|
|
| T |
23593857 |
gttgaagacaaagttgggaaagatatagtgtatgcatactataataaaatcagtgatcctctttagtctaaccgccaaaaaatactttcccatggtggga |
23593956 |
T |
 |
| Q |
161 |
aaca |
164 |
Q |
| |
|
|||| |
|
|
| T |
23593957 |
aaca |
23593960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 8383287 - 8383236
Alignment:
| Q |
61 |
gttgaagacaaagttgggaaagatatagtgtgtccagattataacaagatca |
112 |
Q |
| |
|
||||| |||||||| |||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
8383287 |
gttgatgacaaagtggggaaagatatagtgtgtgtagattataataagatca |
8383236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 24126039 - 24125972
Alignment:
| Q |
125 |
aatctgatggctaaaaaatattttctcatggtggaaaacaactcccctttcccatattaaatgtcacc |
192 |
Q |
| |
|
||||| |||||| |||| | |||| |||||||| ||||||||||||||||||| |||||||| |||| |
|
|
| T |
24126039 |
aatctaatggctgaaaataactttcccatggtgggaaacaactcccctttcccaaattaaatgccacc |
24125972 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 185
Target Start/End: Original strand, 45501296 - 45501335
Alignment:
| Q |
146 |
tttctcatggtggaaaacaactcccctttcccatattaaa |
185 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |||| |
|
|
| T |
45501296 |
tttcccatggtggaaaacaactcccctttcccatactaaa |
45501335 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 41755547 - 41755497
Alignment:
| Q |
144 |
attttctcatggtggaaaacaactcccctttcccatattaaatgtcaccta |
194 |
Q |
| |
|
||||||||||||||| ||| ||||| ||||||||| |||||||| |||||| |
|
|
| T |
41755547 |
attttctcatggtgggaaaaaactctcctttcccaaattaaatgacaccta |
41755497 |
T |
 |
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Target: chr8 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 34364659 - 34364715
Alignment:
| Q |
123 |
ttaatctgatggctaaaaaatattttctcatggtggaaaacaactcccctttcccat |
179 |
Q |
| |
|
||||||| ||||| |||||||||||| |||| |||||||||||| |||||| |||| |
|
|
| T |
34364659 |
ttaatctaatggccaaaaaatatttttccatgatggaaaacaacttcccttttccat |
34364715 |
T |
 |
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