View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19495_high_27 (Length: 251)

Name: NF19495_high_27
Description: NF19495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19495_high_27
NF19495_high_27
[»] chr1 (21 HSPs)
chr1 (69-251)||(27523213-27523394)
chr1 (190-251)||(3559663-3559724)
chr1 (16-69)||(27523450-27523503)
chr1 (184-251)||(40215028-40215095)
chr1 (190-251)||(25463722-25463783)
chr1 (184-251)||(6883527-6883594)
chr1 (184-251)||(16045756-16045823)
chr1 (184-251)||(32000225-32000292)
chr1 (184-251)||(33786593-33786660)
chr1 (184-251)||(9910251-9910318)
chr1 (184-251)||(19015444-19015511)
chr1 (184-251)||(36966666-36966733)
chr1 (184-251)||(37821792-37821859)
chr1 (184-251)||(44094738-44094805)
chr1 (200-251)||(51737561-51737612)
chr1 (190-251)||(41876400-41876461)
chr1 (184-251)||(40273742-40273809)
chr1 (190-251)||(18404488-18404549)
chr1 (200-251)||(25973469-25973520)
chr1 (184-251)||(44690987-44691054)
chr1 (190-251)||(10167446-10167507)
[»] chr2 (18 HSPs)
chr2 (190-251)||(9723451-9723512)
chr2 (184-251)||(9293534-9293601)
chr2 (184-251)||(14941324-14941391)
chr2 (190-251)||(3989122-3989183)
chr2 (184-251)||(7475466-7475533)
chr2 (184-251)||(21936121-21936188)
chr2 (184-251)||(23268020-23268087)
chr2 (184-251)||(27847672-27847739)
chr2 (184-251)||(31174792-31174859)
chr2 (184-251)||(43330952-43331019)
chr2 (190-251)||(10661933-10661994)
chr2 (190-251)||(35160803-35160864)
chr2 (184-251)||(13354886-13354953)
chr2 (184-251)||(22591522-22591589)
chr2 (190-251)||(21393646-21393707)
chr2 (190-251)||(33380253-33380314)
chr2 (201-251)||(16767430-16767480)
chr2 (184-221)||(21393519-21393556)
[»] chr3 (28 HSPs)
chr3 (184-251)||(41883181-41883248)
chr3 (187-251)||(22426302-22426366)
chr3 (184-251)||(6041924-6041991)
chr3 (184-251)||(30385051-30385118)
chr3 (190-251)||(33145758-33145819)
chr3 (190-251)||(37217011-37217072)
chr3 (187-251)||(46918945-46919009)
chr3 (184-251)||(8362003-8362070)
chr3 (190-251)||(3089463-3089524)
chr3 (190-251)||(8320542-8320603)
chr3 (194-251)||(33839581-33839638)
chr3 (184-251)||(3137372-3137439)
chr3 (184-251)||(33113833-33113900)
chr3 (190-251)||(3574484-3574546)
chr3 (190-251)||(42297909-42297971)
chr3 (190-251)||(2754763-2754824)
chr3 (190-251)||(37522099-37522160)
chr3 (190-247)||(48160951-48161008)
chr3 (184-235)||(9797003-9797054)
chr3 (200-251)||(24343603-24343654)
chr3 (184-251)||(34482868-34482935)
chr3 (184-251)||(41224273-41224340)
chr3 (190-251)||(42297399-42297461)
chr3 (190-251)||(3456110-3456171)
chr3 (190-251)||(11347314-11347375)
chr3 (190-251)||(19650857-19650919)
chr3 (184-221)||(33839729-33839766)
chr3 (190-251)||(36864985-36865046)
[»] chr7 (19 HSPs)
chr7 (190-251)||(3962025-3962086)
chr7 (184-251)||(15329313-15329380)
chr7 (184-251)||(42611851-42611918)
chr7 (184-251)||(48880885-48880952)
chr7 (184-251)||(4974693-4974760)
chr7 (190-251)||(18037024-18037085)
chr7 (190-251)||(29737185-29737246)
chr7 (190-251)||(34482881-34482942)
chr7 (190-251)||(36790424-36790485)
chr7 (190-251)||(37477038-37477099)
chr7 (190-251)||(42696129-42696190)
chr7 (184-248)||(45637752-45637816)
chr7 (184-251)||(15238422-15238489)
chr7 (184-251)||(15577808-15577875)
chr7 (184-251)||(20010056-20010122)
chr7 (184-251)||(35444598-35444665)
chr7 (185-251)||(40880750-40880816)
chr7 (190-251)||(30848615-30848676)
chr7 (190-251)||(25167808-25167869)
[»] chr6 (16 HSPs)
chr6 (190-251)||(6031699-6031760)
chr6 (184-251)||(18365531-18365598)
chr6 (184-251)||(18370795-18370862)
chr6 (190-251)||(17705423-17705484)
chr6 (184-251)||(17175979-17176046)
chr6 (184-251)||(28675188-28675255)
chr6 (184-251)||(33695285-33695352)
chr6 (184-251)||(33696736-33696803)
chr6 (190-251)||(2309381-2309442)
chr6 (184-251)||(9752203-9752270)
chr6 (184-235)||(11548562-11548613)
chr6 (184-251)||(25986970-25987037)
chr6 (190-251)||(6127321-6127383)
chr6 (190-251)||(23291042-23291103)
chr6 (184-247)||(32702245-32702308)
chr6 (190-251)||(8515684-8515744)
[»] chr8 (30 HSPs)
chr8 (184-251)||(27782075-27782142)
chr8 (190-251)||(32393904-32393965)
chr8 (184-251)||(3890575-3890641)
chr8 (184-251)||(24211511-24211578)
chr8 (184-251)||(24844817-24844883)
chr8 (184-251)||(31347740-31347807)
chr8 (184-251)||(34665422-34665489)
chr8 (190-251)||(14128910-14128971)
chr8 (184-251)||(7022018-7022085)
chr8 (184-251)||(17841808-17841875)
chr8 (184-251)||(20091759-20091826)
chr8 (184-251)||(30835005-30835072)
chr8 (184-251)||(39772759-39772826)
chr8 (184-251)||(40780087-40780154)
chr8 (184-251)||(42755000-42755067)
chr8 (193-251)||(1645923-1645981)
chr8 (190-251)||(6108191-6108252)
chr8 (184-249)||(8453874-8453939)
chr8 (190-235)||(15972851-15972896)
chr8 (190-251)||(41819736-41819797)
chr8 (191-251)||(10044390-10044450)
chr8 (184-251)||(3596999-3597066)
chr8 (184-251)||(15187600-15187667)
chr8 (190-248)||(37986016-37986074)
chr8 (190-251)||(35353087-35353148)
chr8 (184-251)||(26042071-26042141)
chr8 (184-232)||(32064785-32064833)
chr8 (184-235)||(7017839-7017890)
chr8 (184-251)||(25581197-25581264)
chr8 (184-225)||(3817914-3817955)
[»] scaffold0178 (1 HSPs)
scaffold0178 (184-251)||(11661-11728)
[»] scaffold0096 (1 HSPs)
scaffold0096 (184-251)||(41051-41118)
[»] chr5 (18 HSPs)
chr5 (184-251)||(12614691-12614758)
chr5 (190-251)||(2477682-2477743)
chr5 (190-251)||(33584287-33584348)
chr5 (190-251)||(37321751-37321812)
chr5 (184-251)||(8145415-8145482)
chr5 (184-251)||(14138708-14138775)
chr5 (184-251)||(22913012-22913079)
chr5 (184-251)||(31640898-31640965)
chr5 (190-251)||(4892248-4892309)
chr5 (190-251)||(11361089-11361150)
chr5 (186-251)||(12850843-12850908)
chr5 (190-251)||(25398284-25398345)
chr5 (184-251)||(3521964-3522031)
chr5 (184-251)||(17545643-17545710)
chr5 (190-251)||(3362824-3362885)
chr5 (190-251)||(38899684-38899745)
chr5 (184-251)||(4433965-4434032)
chr5 (184-232)||(6043488-6043536)
[»] chr4 (28 HSPs)
chr4 (184-251)||(21802280-21802347)
chr4 (184-251)||(24392707-24392774)
chr4 (190-251)||(23964423-23964484)
chr4 (184-251)||(9088910-9088977)
chr4 (184-251)||(10442747-10442814)
chr4 (184-251)||(17655470-17655537)
chr4 (184-251)||(31078777-31078844)
chr4 (184-251)||(33530646-33530713)
chr4 (184-251)||(36073390-36073457)
chr4 (184-251)||(44893171-44893238)
chr4 (184-251)||(44893466-44893533)
chr4 (184-251)||(47290106-47290173)
chr4 (184-251)||(49387846-49387913)
chr4 (184-251)||(53123071-53123138)
chr4 (190-251)||(7745070-7745131)
chr4 (190-251)||(42671715-42671776)
chr4 (187-251)||(37219668-37219732)
chr4 (187-251)||(44744478-44744542)
chr4 (184-251)||(22199301-22199368)
chr4 (184-251)||(24128279-24128346)
chr4 (184-251)||(36072987-36073054)
chr4 (184-251)||(46441884-46441951)
chr4 (190-251)||(4751492-4751553)
chr4 (190-251)||(11314192-11314253)
chr4 (190-251)||(50156536-50156597)
chr4 (184-251)||(2624877-2624944)
chr4 (185-251)||(37934899-37934965)
chr4 (218-251)||(9111339-9111372)
[»] scaffold0665 (1 HSPs)
scaffold0665 (190-251)||(3114-3175)
[»] scaffold0085 (1 HSPs)
scaffold0085 (184-251)||(47890-47957)
[»] scaffold0204 (1 HSPs)
scaffold0204 (190-251)||(4442-4503)
[»] scaffold0471 (1 HSPs)
scaffold0471 (184-251)||(12882-12949)
[»] scaffold0228 (3 HSPs)
scaffold0228 (184-251)||(8442-8509)
scaffold0228 (184-251)||(16024-16091)
scaffold0228 (184-251)||(25976-26043)
[»] scaffold0041 (1 HSPs)
scaffold0041 (185-251)||(85467-85533)


Alignment Details
Target: chr1 (Bit Score: 129; Significance: 7e-67; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 69 - 251
Target Start/End: Complemental strand, 27523394 - 27523213
Alignment:
Q  69 aaacactatgattatctcactctttagagagttcaacaaagtgtttgggtaacagacaattcaataattaaagagcaatgctatatacatcaagaaaaat 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  27523394 aaacactatgattatctcactctttagagagttcaacaaagtgtttgggtaacaaacaattcaataattaaagagcaatgctatatacatcaagaacaat 27523295  T
Q  169 tttatnnnnnnnnnnttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    |||||          || || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27523294 tttatcaagaaaaattt-aagaatgacatgacagaataatcacccttaaattttatcaagaaattgtcccgaaattaatgtta 27523213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 3559663 - 3559724
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  3559663 aatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgtta 3559724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 27523503 - 27523450
Alignment:
Q  16 atacattataacaagtttggtccgtaagaaacatgttgttagggagaatatcaa 69  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27523503 atacattataacaagtttggtccgtaagaaacatgttattagggagaatatcaa 27523450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 40215028 - 40215095
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  40215028 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgtta 40215095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 25463722 - 25463783
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  25463722 aatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgtta 25463783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 6883527 - 6883594
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  6883527 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 6883594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 16045823 - 16045756
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||||||||  ||| |||||||||||||    
T  16045823 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatattcttgaaattaatgtta 16045756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 32000292 - 32000225
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||||||   |||||||||||||    
T  32000292 ttcaagaatgacatgacagaataaccacccttagattttatcaagaaattgtactgaaattaatgtta 32000225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 33786660 - 33786593
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| || |||||||||||||||||||||||||||||||||   |||||||||||||    
T  33786660 ttcaagaatgacatggcacaataatcacccttaaattttatcaagaaattgtactgaaattaatgtta 33786593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 9910318 - 9910251
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||| ||||| ||||||||||||||| |||  |||||||||||||    
T  9910318 ttcaagaatgacatggcagaataatcaaccttagattttatcaagaaatagtcctgaaattaatgtta 9910251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 19015444 - 19015511
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||| ||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  19015444 ttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 19015511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 36966733 - 36966666
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||| ||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  36966733 ttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 36966666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 37821859 - 37821792
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||| ||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  37821859 ttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 37821792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 44094738 - 44094805
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||||||||  ||  |||||||||||||    
T  44094738 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgtta 44094805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 51737561 - 51737612
Alignment:
Q  200 cagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||||||||||||||||||||||||||| |||  |||||||||||||    
T  51737561 cagaataatcacccttaaattttatcaagaaatagtcctgaaattaatgtta 51737612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 41876461 - 41876400
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| |||||||||||||||||  |||||||||||||| |||  |||||||||||||    
T  41876461 aatgacatggcagaataatcacccttaggttttatcaagaaatagtcctgaaattaatgtta 41876400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 40273742 - 40273809
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| || |||||||||||||| ||||||| ||||||||||   |||||||||||||    
T  40273742 ttcaagaatgacatgtcaaaataatcacccttagattttattaagaaattgtactgaaattaatgtta 40273809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 18404488 - 18404549
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    |||||||||  |||||||||||| ||| ||||||||||||||| |||  |||||||||||||    
T  18404488 aatgacatggtagaataatcacctttagattttatcaagaaatagtcctgaaattaatgtta 18404549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 25973469 - 25973520
Alignment:
Q  200 cagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||||||||||| |||||||||||||||  ||  |||||||||||||    
T  25973469 cagaataatcacccttagattttatcaagaaataatcctgaaattaatgtta 25973520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 44691054 - 44690987
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||| ||||| ||||||||| || |||| |||||||||||||||| || | ||||||||||||    
T  44691054 ttcaagaattacatggcagaataataactcttagattttatcaagaaattatcccaaaattaatgtta 44690987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 10167446 - 10167507
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    |||||||||| ||||||||||   ||| |||||||||| |||||||||  ||||||||||||    
T  10167446 aatgacatgatagaataatcatttttagattttatcaaaaaattgtctttaaattaatgtta 10167507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 9723451 - 9723512
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9723451 aatgacatgacagaataatcacccttaaattttatcaagaaattgtcccgaaattaatgtta 9723512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 9293601 - 9293534
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  9293601 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgtta 9293534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 14941391 - 14941324
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  14941391 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgtta 14941324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 3989122 - 3989183
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  3989122 aatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgtta 3989183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 7475533 - 7475466
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  7475533 ttcaagaatgacatgatagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 7475466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 21936121 - 21936188
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||| ||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  21936121 ttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgtta 21936188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 23268087 - 23268020
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  23268087 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 23268020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 27847672 - 27847739
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||||||||    
T  27847672 ttcaagaatgacatgacagaataatcaccgttagattttatcaaaaaattgtcctgaaattaatgtta 27847739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 31174859 - 31174792
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  31174859 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 31174792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 43330952 - 43331019
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||   |||||||||||||    
T  43330952 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgaaattaatgtta 43331019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 10661933 - 10661994
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  10661933 aatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 10661994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 35160803 - 35160864
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  35160803 aatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 35160864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 13354886 - 13354953
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||| ||| ||||||||| ||||||| ||||||||||||||| |||| |||||||||||||    
T  13354886 ttcaagaatgatatggcagaataattacccttagattttatcaagaaatagtcttgaaattaatgtta 13354953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 22591522 - 22591589
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||| ||| |||||||||| |||||||||||||| |||||||||||  |||||||||||||    
T  22591522 ttcaagaatgatatggcagaataatcccccttaaattttattaagaaattgtcctgaaattaatgtta 22591589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 21393707 - 21393646
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    |||||||||  |||||||||||||||| ||||||||||||||||||   |||||||||||||    
T  21393707 aatgacatggtagaataatcacccttagattttatcaagaaattgtactgaaattaatgtta 21393646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 33380253 - 33380314
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| | ||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  33380253 aatgacatggctgaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 33380314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 16767480 - 16767430
Alignment:
Q  201 agaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||||| ||||||||||||||||||||| ||  |||||||||||||    
T  16767480 agaataatcactcttaaattttatcaagaaattatcctgaaattaatgtta 16767430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 221
Target Start/End: Original strand, 21393519 - 21393556
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattt 221  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  21393519 ttcaagaatgacatgacacaataatcacccttaaattt 21393556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 41883248 - 41883181
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41883248 ttcaagaatgacatggcagaataatcacccttaaattttatcaagaaattgtcccgaaattaatgtta 41883181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 22426366 - 22426302
Alignment:
Q  187 aaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  22426366 aaaaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgtta 22426302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 6041924 - 6041991
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  6041924 ttcaagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 6041991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 30385051 - 30385118
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  30385051 ttcaaaaatgacatggcagaataatcacccttatattttatcaagaaatagtcctgaaattaatgtta 30385118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 33145758 - 33145819
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  33145758 aatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgtta 33145819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 37217072 - 37217011
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||  |||||||||||||    
T  37217072 aatgacatggcagaataatcacccttaaattttatcaagaaatagtcatgaaattaatgtta 37217011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 46918945 - 46919009
Alignment:
Q  187 aaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    |||||||| |||| |||||||| ||| ||| ||||||||||||||||||||||||||||||||||    
T  46918945 aaaaatgatatgatagaataattacctttagattttatcaagaaattgtctcgaaattaatgtta 46919009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 8362070 - 8362003
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||   |||||||||||||    
T  8362070 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgaaattaatgtta 8362003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 3089463 - 3089524
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| |||||||||||||||  ||| |||||||||||||    
T  3089463 aatgacatggcagaataatcacccttagattttatcaagaaatattcttgaaattaatgtta 3089524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 8320603 - 8320542
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||| || |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  8320603 aatgatatggcaaaataatcacccttaaattttatcaagaaatagtcttgaaattaatgtta 8320542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 33839581 - 33839638
Alignment:
Q  194 acatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||||||||||||| ||| |||||||||||||||||| | |||||||||||||    
T  33839581 acatgacagaataatcaccattagattttatcaagaaattgttttgaaattaatgtta 33839638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 3137439 - 3137372
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| || |||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  3137439 ttcaagaatgacatggcaaaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 3137372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 33113833 - 33113900
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||| ||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  33113833 ttcaagaattacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 33113900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 3574546 - 3574484
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcg-aaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||| | ||||||||||||    
T  3574546 aatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaaattaatgtta 3574484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 42297909 - 42297971
Alignment:
Q  190 aatgacatga-cagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    |||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  42297909 aatgacatgatcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 42297971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 2754763 - 2754824
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||| |||  |||||||||||||    
T  2754763 aatgacatggcagaataatcacctttagattttatcaagaaatagtcctgaaattaatgtta 2754824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 37522099 - 37522160
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||||||||||||||||||| | ||||||| ||||||| |||  |||||||||||||    
T  37522099 aatgacatgacagaataatcaccctaagattttataaagaaatagtcatgaaattaatgtta 37522160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 48160951 - 48161008
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaat 247  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  48160951 aatgatatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaat 48161008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 9797054 - 9797003
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgt 235  Q
    ||||| ||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  9797054 ttcaagaatgacatggcagaataatcaccattagattttatcaagaaattgt 9797003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 24343603 - 24343654
Alignment:
Q  200 cagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    |||||||||||| |||| ||||||||||||||||||  ||||||||||||||    
T  24343603 cagaataatcactcttagattttatcaagaaattgttccgaaattaatgtta 24343654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 34482935 - 34482868
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||| |||  |||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  34482935 ttcaagaatgatatggtagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 34482868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 41224273 - 41224340
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| |||||||||  ||||| ||||||||| |||||||| |||||||||| | |||||||||||||    
T  41224273 ttcaagaatgacatggtagaattatcacccttgaattttattaagaaattgtattgaaattaatgtta 41224340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 42297399 - 42297461
Alignment:
Q  190 aatgacatgac-agaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| ||   |||||||||||||    
T  42297399 aatgacatgactagaataatcacccttagattttatcaagaaatagttctgaaattaatgtta 42297461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 3456110 - 3456171
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||| |||  | |||||||||||    
T  3456110 aatgatatggcagaataatcacccttagattttatcaagaaatagtcctggaattaatgtta 3456171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 11347314 - 11347375
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||| ||||||| ||||||||| ||||| |||  |||||||||||||    
T  11347314 aatgacatggcagaataataacccttagattttatcaggaaatagtcctgaaattaatgtta 11347375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 19650919 - 19650857
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcg-aaattaatgtta 251  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||  |||| | ||||||||||||    
T  19650919 aatgacatggcagaataatcaccattagattttatcaagaaacagtcttgaaaattaatgtta 19650857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 33839766 - 33839729
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattt 221  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  33839766 ttcaagaatgacatgacacaataatcacccttaaattt 33839729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 36865046 - 36864985
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    |||||||||  ||||||||||||||||  ||||||||| |||| |||  |||||||||||||    
T  36865046 aatgacatggtagaataatcacccttaggttttatcaaaaaatagtcctgaaattaatgtta 36864985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 3962025 - 3962086
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  3962025 aatgacatgacagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgtta 3962086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 15329313 - 15329380
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  15329313 ttcaagaatgacatgacagaataatcacccttagattttatcaagaaatagtcttgaaattaatgtta 15329380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 42611851 - 42611918
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  42611851 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgtta 42611918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 48880952 - 48880885
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  48880952 ttcaagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 48880885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 4974760 - 4974693
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||||||||| ||  |||||||||||||    
T  4974760 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaattatcctgaaattaatgtta 4974693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 18037024 - 18037085
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||   |||||||||||||    
T  18037024 aatgacatggcagaataatcacccttaaattttatcaaaaaattgtactgaaattaatgtta 18037085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 29737185 - 29737246
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    |||||||||  |||||||||||||||| ||||||| ||||||||||| ||||||||||||||    
T  29737185 aatgacatggtagaataatcacccttagattttattaagaaattgtcccgaaattaatgtta 29737246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 34482881 - 34482942
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  34482881 aatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 34482942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 36790485 - 36790424
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||   |||||||||||||    
T  36790485 aatgacatggcagaataattacccttaaattttatcaagaaattgttctgaaattaatgtta 36790424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 37477099 - 37477038
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||   |||||||||||||    
T  37477099 aatgacatggcagaataatcatccttaaattttatcaagaaattgtactgaaattaatgtta 37477038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 42696129 - 42696190
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||  ||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  42696129 aatgacatagcagaataatcacccttatattttatcaagaaattgtcctgaaattaatgtta 42696190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 45637752 - 45637816
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatg 248  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  ||||||||||    
T  45637752 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatg 45637816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 15238422 - 15238489
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||| ||| ||||||||||||||||||   |||||||||||||    
T  15238422 ttcaagaatgacatggcagaataatcaccattagattttatcaagaaattgtactgaaattaatgtta 15238489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 15577875 - 15577808
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| | ||||||||||||  |||| |||||||||||||    
T  15577875 ttcaagaatgacatggcagaataatcacccttagactttatcaagaaaaagtcttgaaattaatgtta 15577808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 20010122 - 20010056
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| |||||||| |||||||||||||||||| |||||||||| ||||||||  |||||||||||||    
T  20010122 ttcaagaatgacat-acagaataatcacccttagattttatcaaaaaattgtcctgaaattaatgtta 20010056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 35444598 - 35444665
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| ||   |||||||||||||    
T  35444598 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgtta 35444665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 40880816 - 40880750
Alignment:
Q  185 tcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    |||| ||||||||| ||||||||||| ||||||||||||| |||||||| ||  |||||||||||||    
T  40880816 tcaagaatgacatggcagaataatcatccttaaattttatgaagaaattatcctgaaattaatgtta 40880750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 30848615 - 30848676
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||| |||  |||||||||||||    
T  30848615 aatgacatggcagaataatcatccttagattttatcaagaaatagtcctgaaattaatgtta 30848676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 25167869 - 25167808
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||| ||   |||||||||||||    
T  25167869 aatgacatggcagaataatcatccttagattttatcaagaaatagttctgaaattaatgtta 25167808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 6031760 - 6031699
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  6031760 aatgacatgacagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgtta 6031699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 18365598 - 18365531
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  18365598 ttcaagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgtta 18365531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 18370862 - 18370795
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  18370862 ttcaagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgtta 18370795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 17705484 - 17705423
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  17705484 aatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgtta 17705423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 17176046 - 17175979
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||  ||  |||||||||||||    
T  17176046 ttcaagaatgacatgacagaataatcacccttagattttatcaagaaataatcatgaaattaatgtta 17175979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 28675188 - 28675255
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| | ||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  28675188 ttcaagaatgacatgtcggaataatcacccttagattttatcaagaaattgtcctgaaattaatgtta 28675255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 33695352 - 33695285
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  33695352 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 33695285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 33696736 - 33696803
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  33696736 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 33696803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 2309442 - 2309381
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    |||| |||| ||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  2309442 aatggcatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgtta 2309381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 9752270 - 9752203
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||| ||| ||||||||||||||||| ||||||| |||||||||||  |||||||||||||    
T  9752270 ttcaagaatgatatggcagaataatcacccttagattttattaagaaattgtcctgaaattaatgtta 9752203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 11548613 - 11548562
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgt 235  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  11548613 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaattgt 11548562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 25986970 - 25987037
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| || ||||||||| |||||||||||||||||||| |||  |||||||||||||    
T  25986970 ttcaagaatgacatggcaaaataatcactcttaaattttatcaagaaatagtcctgaaattaatgtta 25987037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 6127321 - 6127383
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcg-aaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||| | ||||||||||||    
T  6127321 aatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaaattaatgtta 6127383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 23291103 - 23291042
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| ||   |||||||||||||    
T  23291103 aatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgtta 23291042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 32702245 - 32702308
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaat 247  Q
    ||||| ||||| ||| ||||||||||||||||| ||||||||||||||| |||  |||||||||    
T  32702245 ttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaat 32702308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 8515744 - 8515684
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||  || | |||||||||||||||||| ||||||||||||||    
T  8515744 aatgacatggcagaataatcacatttga-ttttatcaagaaattgtcccgaaattaatgtta 8515684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 27782142 - 27782075
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  27782142 ttcaataatgacatggcagaataatcacccttagattttatcaagaaattgtcttgaaattaatgtta 27782075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 32393904 - 32393965
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  32393904 aatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgtta 32393965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 3890641 - 3890575
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  3890641 ttcaagaatgacatggcagaataatcacc-ttagattttatcaagaaattgtctcgaaattaatgtta 3890575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 24211578 - 24211511
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  24211578 ttcaagaatggcatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgtta 24211511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 24844883 - 24844817
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| |||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  24844883 ttcaagaatgacatgaca-aataatcacccttagattttatcaagaaattgtcccgaaattaatgtta 24844817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 31347807 - 31347740
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  31347807 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgtta 31347740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 34665422 - 34665489
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  34665422 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgtta 34665489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 14128910 - 14128971
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  14128910 aatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgtta 14128971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 7022018 - 7022085
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||| ||| ||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  7022018 ttcaagaatgatatggcagaataatcacccttagattttatcaagaaattgtaccgaaattaatgtta 7022085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 17841875 - 17841808
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  17841875 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 17841808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 20091826 - 20091759
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  20091826 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatcgtcctgaaattaatgtta 20091759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 30835072 - 30835005
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||  |||||||||||||||||||  |||||||||||||    
T  30835072 ttcaagaatgacatggcagaataatcaccctttgattttatcaagaaattgtcctgaaattaatgtta 30835005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 39772826 - 39772759
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||| |||| |||| |||||||||||||    
T  39772826 ttcaagaatgacatggcagaataatcacccttagattttatcaaaaaatagtcttgaaattaatgtta 39772759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 40780154 - 40780087
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  40780154 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 40780087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 42755067 - 42755000
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  42755067 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcatgaaattaatgtta 42755000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 193 - 251
Target Start/End: Complemental strand, 1645981 - 1645923
Alignment:
Q  193 gacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    |||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  1645981 gacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgtta 1645923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 6108252 - 6108191
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  6108252 aatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 6108191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 8453874 - 8453939
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgt 249  Q
    ||||| |||||||||||| |||||||||||||| ||||||||||||||| |||  |||||||||||    
T  8453874 ttcaagaatgacatgacaaaataatcacccttagattttatcaagaaatagtcctgaaattaatgt 8453939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 15972896 - 15972851
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgt 235  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  15972896 aatgacatgacagaataatcacccttagattttatcaagaaattgt 15972851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 41819797 - 41819736
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  41819797 aatgatatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgtta 41819736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 10044390 - 10044450
Alignment:
Q  191 atgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    |||||||||||||||||||| ||||||||||||||||||||| || | | |||||||||||    
T  10044390 atgacatgacagaataatcatccttaaattttatcaagaaatagttttggaattaatgtta 10044450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 3597066 - 3596999
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||| ||||||| ||||||||||||||| |||  |||||||||||||    
T  3597066 ttcaagaatgacatggcagaataattacccttagattttatcaagaaatagtcctgaaattaatgtta 3596999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 15187600 - 15187667
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||| ||| ||||||||| ||||||| ||||||||||||||| |||| |||||||||||||    
T  15187600 ttcaagaatgatatggcagaataattacccttagattttatcaagaaatagtcttgaaattaatgtta 15187667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 37986074 - 37986016
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatg 248  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||  ||||||||||    
T  37986074 aatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatg 37986016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 35353087 - 35353148
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| |||||||||||||||  ||  |||||||||||||    
T  35353087 aatgacatggcagaataatcacccttagattttatcaagaaataatcatgaaattaatgtta 35353148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 26042141 - 26042071
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaa---ttttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||||||||||||||||||||| |   |||||||||||||| |||  |||||||||||||    
T  26042141 ttcaagaatgacatgacagaataatcacccttagatttttttatcaagaaatagtcctgaaattaatgtta 26042071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 32064785 - 32064833
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaat 232  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||||||||    
T  32064785 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaat 32064833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 7017890 - 7017839
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgt 235  Q
    ||||| ||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  7017890 ttcaagaatgacatggcagaataatcatccttagattttatcaagaaattgt 7017839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 25581264 - 25581197
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| || |||||||||| ||| ||||||||||||||| |||  |||||||||||||    
T  25581264 ttcaagaatgacatggcaaaataatcacctttagattttatcaagaaatagtcctgaaattaatgtta 25581197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 3817955 - 3817914
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatc 225  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||    
T  3817955 ttcaagaattacatgacagaataatcacccttagattttatc 3817914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 11661 - 11728
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  11661 ttcaagaatgacatgacagaataatcacccttagattttatcaagaaatagtcatgaaattaatgtta 11728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 41051 - 41118
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  41051 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgtta 41118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 12614758 - 12614691
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| |||||||||||| |||||||||||||| |||||||||||||||||||  |||||||||||||    
T  12614758 ttcaagaatgacatgacataataatcacccttagattttatcaagaaattgtcctgaaattaatgtta 12614691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 2477682 - 2477743
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  2477682 aatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgtta 2477743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 33584348 - 33584287
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||  |||||||||||||    
T  33584348 aatgacatggcagaataatcacccttaaattttatcaagaaatagtcctgaaattaatgtta 33584287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 37321812 - 37321751
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| |||||||||||||||||||||||||||| |||| |||| |||||||||||||    
T  37321812 aatgacatggcagaataatcacccttaaattttatcaataaatagtcttgaaattaatgtta 37321751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 8145415 - 8145482
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||| |||| ||||||||    
T  8145415 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaactaatgtta 8145482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 14138708 - 14138775
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||| ||||| ||||||||||||||||||||||||||||||||| |||  |||||||||||||    
T  14138708 ttcaagaattacatggcagaataatcacccttaaattttatcaagaaatagtcctgaaattaatgtta 14138775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 22913079 - 22913012
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||   |||||||||||||    
T  22913079 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgaaattaatgtta 22913012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 31640965 - 31640898
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| |||||||| |||||||| |||||||||||||||||||  |||||||||||||    
T  31640965 ttcaagaatgacatggcagaataaccacccttagattttatcaagaaattgtcatgaaattaatgtta 31640898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 4892248 - 4892309
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  4892248 aatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 4892309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 11361150 - 11361089
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  11361150 aatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 11361089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 12850843 - 12850908
Alignment:
Q  186 caaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||||||| |||||||| |||||||| ||||||||||||||| |||  |||||||||||||    
T  12850843 caaaaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaattaatgtta 12850908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 25398284 - 25398345
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  25398284 aatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 25398345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 3522031 - 3521964
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||||||| ||   |||||||||||||    
T  3522031 ttcaaaaatgacatggcagaataatcaccattagattttatcaagaaatagttctgaaattaatgtta 3521964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 17545710 - 17545643
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||| ||| ||||||||||||||||||   |||||||||||||    
T  17545710 ttcaagaatgacatggcagaataatcaccattagattttatcaagaaattgtactgaaattaatgtta 17545643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 3362824 - 3362885
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| |||||||| |||||||| ||||||||||||||| |||  |||||||||||||    
T  3362824 aatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaattaatgtta 3362885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 38899745 - 38899684
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| |||||||| |||||||| ||||||||||||||| |||  |||||||||||||    
T  38899745 aatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaattaatgtta 38899684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 4434032 - 4433965
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||| ||| ||||||||||||||||| ||||||||||||||| ||   |||||||||||||    
T  4434032 ttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgtta 4433965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 6043536 - 6043488
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaat 232  Q
    ||||| |||||||||  |||||||||||||||| |||||||||||||||    
T  6043536 ttcaagaatgacatggaagaataatcacccttagattttatcaagaaat 6043488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 21802347 - 21802280
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  21802347 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgtta 21802280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 24392707 - 24392774
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  24392707 ttcaagaatgacatggcagaataatcacccttaaattttatcaagaaattgtactgaaattaatgtta 24392774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 23964484 - 23964423
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  23964484 aatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgtta 23964423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 9088910 - 9088977
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  9088910 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 9088977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 10442814 - 10442747
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  10442814 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 10442747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 17655470 - 17655537
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  17655470 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 17655537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 31078844 - 31078777
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  31078844 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 31078777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 33530713 - 33530646
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||| |||| ||||||||    
T  33530713 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaactaatgtta 33530646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 36073390 - 36073457
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||  ||  |||||||||||||    
T  36073390 ttcaagaatgacatggcagaataatcacccttaaattttatcaagaaatattcatgaaattaatgtta 36073457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 44893238 - 44893171
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  44893238 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 44893171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 44893466 - 44893533
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  44893466 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 44893533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 47290106 - 47290173
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  47290106 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 47290173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 49387913 - 49387846
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  49387913 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 49387846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 53123071 - 53123138
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  53123071 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 53123138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 7745131 - 7745070
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  7745131 aatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 7745070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 42671715 - 42671776
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||   ||||||||||||    
T  42671715 aatgacatggcagaataatcacccttagattttatcaagaaattgtcctaaaattaatgtta 42671776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 37219668 - 37219732
Alignment:
Q  187 aaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||||||  | ||||||||| ||||||||||||||||||||||||  |||||||||||||    
T  37219668 aaaaatgacatggtaaaataatcactcttaaattttatcaagaaattgtcctgaaattaatgtta 37219732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 44744478 - 44744542
Alignment:
Q  187 aaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||||  |||||| ||||||    
T  44744478 aaaaatgacatggtagaataatcacccttaaattttatcaaaaaattgtcctgaaattgatgtta 44744542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 22199301 - 22199368
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||| ||||| ||||||||||||||| |||| |||| ||||||||    
T  22199301 ttcaagaatgacatggcagaataatcagccttagattttatcaagaaatagtcttgaaactaatgtta 22199368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 24128279 - 24128346
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||| ||||| ||||||||||||||| |||  |||||||||||||    
T  24128279 ttcaagaatgacatggcagaataatcatccttagattttatcaagaaatagtcctgaaattaatgtta 24128346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 36072987 - 36073054
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| |||||||| |||||||| ||||||||||||||| |||  |||||||||||||    
T  36072987 ttcaagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaattaatgtta 36073054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 46441884 - 46441951
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| || |||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  46441884 ttcaagaatgacatggcaaaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 46441951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 4751492 - 4751553
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| |||||||| |||||||| ||||||||||||||| |||  |||||||||||||    
T  4751492 aatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaattaatgtta 4751553  T

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Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 11314253 - 11314192
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||||||   |||||||||||||    
T  11314253 aatgacatgacagaataatcatccttagattatatcaagaaattgttctgaaattaatgtta 11314192  T

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Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 50156597 - 50156536
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||   ||||||||||||    
T  50156597 aatgacatggcagaataatcacccttagattttatcaagaaatagtcataaaattaatgtta 50156536  T

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Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 2624877 - 2624944
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||| ||| ||||||||||||||||| |||||||||||||||  ||  |||||||||||||    
T  2624877 ttcaagaatgaaatggcagaataatcacccttagattttatcaagaaataatcatgaaattaatgtta 2624944  T

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Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 37934965 - 37934899
Alignment:
Q  185 tcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    |||| |||||||||  |||||| ||||||||| |||||||||||||||| ||  |||||||||||||    
T  37934965 tcaagaatgacatggtagaatactcacccttagattttatcaagaaattatcctgaaattaatgtta 37934899  T

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Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 218 - 251
Target Start/End: Original strand, 9111339 - 9111372
Alignment:
Q  218 attttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||||||||||||||||||||||| ||||    
T  9111339 attttatcaagaaattgtctcgaaattaaagtta 9111372  T

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Target: scaffold0665 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 3114 - 3175
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  3114 aatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgtta 3175  T

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Target: scaffold0085 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 47890 - 47957
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  47890 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 47957  T

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Target: scaffold0204 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 4442 - 4503
Alignment:
Q  190 aatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  4442 aatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgtta 4503  T

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Target: scaffold0471 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 12882 - 12949
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||| ||||| ||||||||||||||| |||  |||||||||||||    
T  12882 ttcaagaatgacatggcagaataatcatccttagattttatcaagaaatagtcctgaaattaatgtta 12949  T

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Target: scaffold0228 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 8442 - 8509
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| ||   |||||||||||||    
T  8442 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgtta 8509  T

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Target: scaffold0228; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 16024 - 16091
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| ||   |||||||||||||    
T  16024 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgtta 16091  T

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Target: scaffold0228; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 25976 - 26043
Alignment:
Q  184 ttcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||| ||   |||||||||||||    
T  25976 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgtta 26043  T

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Target: scaffold0041 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 85467 - 85533
Alignment:
Q  185 tcaaaaatgacatgacagaataatcacccttaaattttatcaagaaattgtctcgaaattaatgtta 251  Q
    |||| ||||||||| ||||||||||| ||||||||||||| |||||||| ||  |||||||||||||    
T  85467 tcaagaatgacatggcagaataatcatccttaaattttatgaagaaattatcctgaaattaatgtta 85533  T

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